View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11737A_low_211 (Length: 298)
Name: NF11737A_low_211
Description: NF11737A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11737A_low_211 |
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Alignment Details
Target: chr7 (Bit Score: 272; Significance: 1e-152; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 17 - 296
Target Start/End: Original strand, 37902543 - 37902822
Alignment:
| Q |
17 |
gacatcagaaagtttaggattgtttacatattgctcacccaagtaaacctgcatacaacacaaaacaaagatctcattttccattttcatccccgtaata |
116 |
Q |
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| T |
37902543 |
gacatcagaaagtttaggattgtttacgtattgctcacccaagtaaacctgcatacaacacaaaacaaagatctcattttccattttcatccccgtaata |
37902642 |
T |
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| Q |
117 |
tatagaaaatagaatatgaacaactcagtttcaaagacaagaagttcaaacttcaattgaattgtgcaattatgataacttggaacaaatgcttcaataa |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
37902643 |
tatagaaaatagaatatgaacaactcagtttcaaagacaagaagttcaaacttcaattgaattgtgcaattatgataacttggaacaaatgcttcaacaa |
37902742 |
T |
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| Q |
217 |
gtgaagaacaaaaaaccaaactagatatgatgagcccatttgataaataaaatgcaaaatacctggggagttggtgatgt |
296 |
Q |
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| T |
37902743 |
gtgaagaacaaaaaaccaaactagatatgatgagcccatttgataaataaaatgcaaaatacctggggagttggtgatgt |
37902822 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 17 - 296
Target Start/End: Original strand, 37909054 - 37909333
Alignment:
| Q |
17 |
gacatcagaaagtttaggattgtttacatattgctcacccaagtaaacctgcatacaacacaaaacaaagatctcattttccattttcatccccgtaata |
116 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37909054 |
gacatcagaaagtttaggattgtttacgtattgctcacccaagtaaacctgcatacaacacaaaacaaagatctcattttccattttcatccccgtaata |
37909153 |
T |
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| Q |
117 |
tatagaaaatagaatatgaacaactcagtttcaaagacaagaagttcaaacttcaattgaattgtgcaattatgataacttggaacaaatgcttcaataa |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
37909154 |
tatagaaaatagaatatgaacaactcagtttcaaagacaagaagttcaaacttcaattgaattgtgcaattatgataacttggaacaaatgcttcaacaa |
37909253 |
T |
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| Q |
217 |
gtgaagaacaaaaaaccaaactagatatgatgagcccatttgataaataaaatgcaaaatacctggggagttggtgatgt |
296 |
Q |
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| T |
37909254 |
gtgaagaacaaaaaaccaaactagatatgatgagcccatttgataaataaaatgcaaaatacctggggagttggtgatgt |
37909333 |
T |
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