View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11737A_low_238 (Length: 286)
Name: NF11737A_low_238
Description: NF11737A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11737A_low_238 |
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Alignment Details
Target: chr5 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 70 - 268
Target Start/End: Complemental strand, 22837942 - 22837744
Alignment:
| Q |
70 |
gagaaagaaaagaaatcataccatgaagaagccaaaacaagctaccattaaccatgtaatcaaagacaagcaatttttcatcccttgcaaaataataagc |
169 |
Q |
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| T |
22837942 |
gagaaagaaaagaaatcataccatgaagaagccaaaacaagctaccattaaccatgtaatcaaagacaagcaatttttcatcccttgcaaaataataagc |
22837843 |
T |
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| Q |
170 |
ctttaagctaacaatgttggagtgtcttaactttccaagaacttccattctctgctcgaactctttcttcccactaatattaatctccttcaacctctt |
268 |
Q |
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||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22837842 |
ctttaagctaacaatgttggagtgttttaactttccaagaatttccattctctgctcgaactctttcttcccactaatattaatctccttcaacctctt |
22837744 |
T |
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