View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11737A_low_281 (Length: 265)
Name: NF11737A_low_281
Description: NF11737A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11737A_low_281 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 22 - 265
Target Start/End: Original strand, 7933727 - 7933968
Alignment:
| Q |
22 |
ggaaaaactatgttcggagcatgaagcatgaattagttactgatgctgcaacttacaagatatgaacaattttcagcatcttgaagtagcctatacatgc |
121 |
Q |
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| T |
7933727 |
ggaaaaactatgttcggagcatgaagcatgaattagttactgatgctgcaacttacaagatatgaacaattttcagcatcttgaagtagcctatacatgc |
7933826 |
T |
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| Q |
122 |
tccatttttgtctttttctcaagtactaatgcaattttataagcgtaaaactgcatgaagacacgagcaagtacttattagcttgaaccgttccattcgt |
221 |
Q |
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|||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
7933827 |
tccatttttgtctttttcacaagtactaatgcaattt--taagtgtaaaactgcatgaagacaagagcaagtacttattagcttgaaccgttccattcgt |
7933924 |
T |
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| Q |
222 |
cgtagaactctttgacaaactccaccatgaacttgtgccttctc |
265 |
Q |
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| T |
7933925 |
cgtagaactctttgacaaactccaccatgaacttgtgccttctc |
7933968 |
T |
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