View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11737A_low_333 (Length: 250)

Name: NF11737A_low_333
Description: NF11737A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11737A_low_333
NF11737A_low_333
[»] chr6 (32 HSPs)
chr6 (1-229)||(27630001-27630229)
chr6 (9-221)||(27272883-27273095)
chr6 (4-218)||(4524976-4525190)
chr6 (4-229)||(4546079-4546304)
chr6 (4-229)||(28207118-28207343)
chr6 (4-229)||(4724438-4724663)
chr6 (4-218)||(4757448-4757662)
chr6 (4-218)||(27360305-27360519)
chr6 (4-218)||(27450648-27450862)
chr6 (4-218)||(29572700-29572914)
chr6 (4-179)||(17024988-17025163)
chr6 (4-218)||(30558311-30558525)
chr6 (4-179)||(27007438-27007613)
chr6 (4-179)||(29549204-29549379)
chr6 (4-180)||(16944322-16944498)
chr6 (4-176)||(24304913-24305085)
chr6 (4-180)||(29501131-29501307)
chr6 (4-180)||(34463656-34463832)
chr6 (4-179)||(26918106-26918281)
chr6 (4-218)||(26777922-26778136)
chr6 (4-176)||(15424612-15424784)
chr6 (4-180)||(16673852-16674028)
chr6 (4-179)||(3695789-3695964)
chr6 (4-179)||(4772723-4772898)
chr6 (4-179)||(26988727-26988902)
chr6 (4-179)||(27044116-27044291)
chr6 (4-179)||(27484843-27485018)
chr6 (4-101)||(20160508-20160605)
chr6 (4-101)||(22172226-22172323)
chr6 (4-176)||(26999802-26999974)
chr6 (4-179)||(16749580-16749755)
chr6 (4-179)||(26116714-26116889)
[»] chr5 (40 HSPs)
chr5 (4-229)||(37358904-37359129)
chr5 (4-215)||(15759106-15759317)
chr5 (4-218)||(31826668-31826882)
chr5 (4-227)||(37754658-37754881)
chr5 (4-218)||(12131854-12132068)
chr5 (4-218)||(32599718-32599932)
chr5 (4-218)||(37671741-37671955)
chr5 (4-218)||(37771248-37771462)
chr5 (4-218)||(8665724-8665938)
chr5 (4-218)||(24681136-24681350)
chr5 (4-218)||(24723663-24723877)
chr5 (4-218)||(30151717-30151931)
chr5 (4-179)||(31431166-31431341)
chr5 (4-218)||(18375661-18375875)
chr5 (4-218)||(33516055-33516269)
chr5 (4-176)||(2510792-2510964)
chr5 (4-176)||(9317192-9317364)
chr5 (4-179)||(5637648-5637823)
chr5 (4-179)||(26480130-26480305)
chr5 (4-218)||(28960047-28960261)
chr5 (4-179)||(15659009-15659184)
chr5 (4-179)||(33777225-33777400)
chr5 (4-179)||(34616259-34616434)
chr5 (4-176)||(6874043-6874215)
chr5 (4-180)||(18500997-18501173)
chr5 (4-180)||(29967315-29967491)
chr5 (4-180)||(30029152-30029328)
chr5 (4-180)||(40473801-40473977)
chr5 (4-180)||(43077986-43078162)
chr5 (4-179)||(3789264-3789439)
chr5 (4-179)||(11549092-11549267)
chr5 (4-179)||(13325093-13325268)
chr5 (4-179)||(23718237-23718412)
chr5 (4-179)||(23752699-23752874)
chr5 (4-179)||(30168207-30168382)
chr5 (4-99)||(33292346-33292441)
chr5 (4-180)||(41674446-41674622)
chr5 (4-179)||(22999363-22999538)
chr5 (16-101)||(22888289-22888374)
chr5 (139-179)||(9548927-9548967)
[»] chr1 (5 HSPs)
chr1 (4-218)||(51637907-51638121)
chr1 (4-179)||(10962398-10962573)
chr1 (4-180)||(28584708-28584884)
chr1 (4-176)||(41793660-41793832)
chr1 (1-101)||(20460914-20461014)
[»] scaffold0038 (1 HSPs)
scaffold0038 (4-229)||(7616-7841)
[»] chr3 (45 HSPs)
chr3 (4-229)||(6542867-6543092)
chr3 (4-218)||(8211392-8211606)
chr3 (4-218)||(22871267-22871481)
chr3 (4-218)||(22886326-22886540)
chr3 (4-218)||(5013363-5013577)
chr3 (4-218)||(18224842-18225056)
chr3 (4-218)||(31964866-31965080)
chr3 (4-218)||(50134464-50134678)
chr3 (4-215)||(28338956-28339167)
chr3 (4-218)||(4347077-4347291)
chr3 (4-218)||(4416567-4416781)
chr3 (4-218)||(5466636-5466850)
chr3 (4-218)||(5609715-5609929)
chr3 (4-179)||(5596759-5596934)
chr3 (4-215)||(7996216-7996427)
chr3 (4-215)||(10642724-10642935)
chr3 (4-215)||(28116350-28116561)
chr3 (4-179)||(29149148-29149323)
chr3 (5-179)||(18330364-18330538)
chr3 (4-218)||(28020929-28021143)
chr3 (4-180)||(20577255-20577431)
chr3 (4-180)||(24327848-24328024)
chr3 (4-180)||(48465604-48465780)
chr3 (4-179)||(18277445-18277620)
chr3 (4-179)||(18292746-18292921)
chr3 (4-179)||(18308047-18308222)
chr3 (4-99)||(32438927-32439022)
chr3 (4-179)||(35880456-35880631)
chr3 (4-179)||(47023143-47023318)
chr3 (4-180)||(7072901-7073077)
chr3 (4-180)||(11110754-11110930)
chr3 (4-176)||(15741475-15741647)
chr3 (4-180)||(18242416-18242592)
chr3 (4-180)||(36997482-36997658)
chr3 (4-180)||(51781700-51781876)
chr3 (4-179)||(4721321-4721496)
chr3 (4-99)||(4892983-4893078)
chr3 (4-218)||(17985349-17985563)
chr3 (4-218)||(29665378-29665592)
chr3 (4-101)||(16626896-16626993)
chr3 (4-180)||(51796788-51796965)
chr3 (4-176)||(4797046-4797218)
chr3 (22-176)||(18050955-18051109)
chr3 (22-179)||(6192006-6192163)
chr3 (4-101)||(22387968-22388065)
[»] chr7 (26 HSPs)
chr7 (4-218)||(4145361-4145575)
chr7 (4-215)||(45387037-45387248)
chr7 (4-218)||(3444985-3445199)
chr7 (4-218)||(26275332-26275546)
chr7 (4-218)||(26320107-26320321)
chr7 (4-218)||(26485982-26486196)
chr7 (4-218)||(31564637-31564851)
chr7 (4-179)||(9618381-9618556)
chr7 (4-218)||(24592779-24592993)
chr7 (1-218)||(16736695-16736912)
chr7 (1-218)||(16751749-16751966)
chr7 (1-218)||(17523223-17523440)
chr7 (1-218)||(17529775-17529992)
chr7 (4-180)||(26538111-26538287)
chr7 (4-179)||(5127722-5127897)
chr7 (4-179)||(31124641-31124816)
chr7 (4-218)||(26434948-26435162)
chr7 (4-101)||(5159330-5159427)
chr7 (4-180)||(11441289-11441465)
chr7 (16-176)||(16041059-16041219)
chr7 (4-179)||(26670152-26670327)
chr7 (4-218)||(5147578-5147792)
chr7 (4-176)||(2154306-2154478)
chr7 (4-179)||(11425014-11425189)
chr7 (22-176)||(16503636-16503790)
chr7 (22-176)||(16518672-16518826)
[»] chr4 (20 HSPs)
chr4 (4-218)||(31126870-31127084)
chr4 (4-218)||(21969406-21969620)
chr4 (4-218)||(54833095-54833309)
chr4 (4-179)||(19373005-19373180)
chr4 (4-218)||(30753447-30753661)
chr4 (4-218)||(40105990-40106204)
chr4 (4-180)||(39850366-39850542)
chr4 (4-218)||(14098246-14098460)
chr4 (4-218)||(27163669-27163883)
chr4 (4-176)||(14664765-14664937)
chr4 (4-180)||(18800974-18801150)
chr4 (4-179)||(14763656-14763831)
chr4 (4-99)||(24112489-24112584)
chr4 (4-99)||(34189309-34189404)
chr4 (139-218)||(5005575-5005654)
chr4 (4-179)||(24592663-24592838)
chr4 (4-179)||(36344864-36345039)
chr4 (16-152)||(1900031-1900167)
chr4 (4-180)||(33674162-33674338)
chr4 (1-152)||(15227644-15227795)
[»] scaffold0350 (1 HSPs)
scaffold0350 (4-218)||(7591-7805)
[»] chr2 (31 HSPs)
chr2 (4-218)||(39889748-39889962)
chr2 (4-231)||(22926369-22926596)
chr2 (4-218)||(12716946-12717160)
chr2 (4-218)||(21677523-21677737)
chr2 (4-218)||(31875967-31876181)
chr2 (4-218)||(34861366-34861580)
chr2 (4-218)||(37686250-37686464)
chr2 (4-218)||(37701515-37701729)
chr2 (4-218)||(32049484-32049698)
chr2 (4-179)||(37925218-37925393)
chr2 (4-218)||(16829679-16829893)
chr2 (4-218)||(16891588-16891802)
chr2 (4-180)||(19416840-19417016)
chr2 (4-180)||(40233223-40233399)
chr2 (4-179)||(261106-261281)
chr2 (4-44)||(9350335-9350375)
chr2 (4-44)||(12586661-12586701)
chr2 (4-180)||(13936885-13937061)
chr2 (4-44)||(27777067-27777107)
chr2 (4-44)||(27803552-27803592)
chr2 (4-44)||(27816834-27816874)
chr2 (4-180)||(34279173-34279349)
chr2 (4-179)||(37374886-37375061)
chr2 (4-218)||(11635530-11635744)
chr2 (4-218)||(11641719-11641933)
chr2 (4-176)||(23128907-23129079)
chr2 (4-180)||(39052169-39052345)
chr2 (124-176)||(12655270-12655322)
chr2 (124-176)||(20837646-20837698)
chr2 (16-152)||(21703514-21703650)
chr2 (16-176)||(27434797-27434957)
[»] chr8 (15 HSPs)
chr8 (4-229)||(12093044-12093269)
chr8 (4-218)||(19208671-19208885)
chr8 (4-218)||(19286155-19286369)
chr8 (4-179)||(18710315-18710490)
chr8 (4-218)||(31354214-31354428)
chr8 (4-180)||(31490061-31490237)
chr8 (4-229)||(29828992-29829217)
chr8 (4-180)||(3329830-3330006)
chr8 (4-180)||(33258451-33258627)
chr8 (4-179)||(28362266-28362441)
chr8 (4-176)||(14557359-14557531)
chr8 (4-176)||(16277286-16277458)
chr8 (22-176)||(2137588-2137742)
chr8 (1-215)||(19674131-19674345)
chr8 (22-176)||(19687830-19687984)
[»] scaffold0336 (1 HSPs)
scaffold0336 (4-179)||(7961-8136)
[»] scaffold0237 (1 HSPs)
scaffold0237 (4-218)||(15282-15496)
[»] scaffold0144 (1 HSPs)
scaffold0144 (4-218)||(26554-26768)
[»] scaffold0029 (1 HSPs)
scaffold0029 (4-179)||(482-657)
[»] scaffold0159 (2 HSPs)
scaffold0159 (4-190)||(9418-9604)
scaffold0159 (4-44)||(19879-19919)
[»] scaffold0143 (1 HSPs)
scaffold0143 (4-176)||(27024-27196)
[»] scaffold0089 (1 HSPs)
scaffold0089 (22-176)||(29495-29649)
[»] scaffold0496 (1 HSPs)
scaffold0496 (4-44)||(85-125)
[»] scaffold0124 (1 HSPs)
scaffold0124 (22-152)||(20168-20298)
[»] scaffold0415 (1 HSPs)
scaffold0415 (11-44)||(5853-5886)


Alignment Details
Target: chr6 (Bit Score: 193; Significance: 1e-105; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 27630001 - 27630229
Alignment:
Q  1 tattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagcca 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| | ||| |||||||||||||||||||||| |||||||||||||||||||||||     
T  27630001 tattgatggtaaaacggtgggaagaatggatgctgagaatatggtgtacaggggtatggtggaggtagctgagcaacattaacaggggcgacagtagccg 27630100  T
Q  101 tagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacc 200  Q
    ||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27630101 tagactgacctgctcccgaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacc 27630200  T
Q  201 cttctcaaatacaatgataccctctctga 229  Q
    |||||||||||||||||||||||||||||    
T  27630201 cttctcaaatacaatgataccctctctga 27630229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 9 - 221
Target Start/End: Original strand, 27272883 - 27273095
Alignment:
Q  9 gtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatagaccga 108  Q
    |||||| || ||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| | ||    
T  27272883 gtaaaatggcgggtagaatggatgttgagaatacggtacataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagctgtagtctga 27272982  T
Q  109 cctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaa 208  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  27272983 cctgctccagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcaacccatttgtagaagactcacccttctcaa 27273082  T
Q  209 atacaatgatacc 221  Q
    |||||||||||||    
T  27273083 atacaatgatacc 27273095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 218
Target Start/End: Complemental strand, 4525190 - 4524976
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || |||||||||||||    
T  4525190 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggtgcaacagtagccatag 4525091  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | ||    
T  4525090 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagcttt 4524991  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  4524990 ctcaaacacaatgat 4524976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 4546079 - 4546304
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || || ||||||||||    
T  4546079 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacggtagccatag 4546178  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||  ||  || |||||||| || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | ||    
T  4546179 attgaccggctgcagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagcttt 4546278  T
Q  204 ctcaaatacaatgataccctctctga 229  Q
    |||||| |||||||| || |||||||    
T  4546279 ctcaaacacaatgatcccatctctga 4546304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 4 - 229
Target Start/End: Complemental strand, 28207343 - 28207118
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || || ||||||||||    
T  28207343 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacggtagccatag 28207244  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||  ||  || |||||||| || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | ||    
T  28207243 attgaccggctgcagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagcttt 28207144  T
Q  204 ctcaaatacaatgataccctctctga 229  Q
    |||||| |||||||| || |||||||    
T  28207143 ctcaaacacaatgatcccatctctga 28207118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 4724438 - 4724663
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || || ||||||||||    
T  4724438 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacggtagccatag 4724537  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||  ||  || |||||||| || || ||||| |||||||||||||| ||||| |||||||| |||||  |||| |||||||| ||| | ||    
T  4724538 attgaccggctgcagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccataccttttcgatgcactcgtagaagattcagcttt 4724637  T
Q  204 ctcaaatacaatgataccctctctga 229  Q
    |||||| |||||||| || |||||||    
T  4724638 ctcaaacacaatgatcccatctctga 4724663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 218
Target Start/End: Complemental strand, 4757662 - 4757448
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| ||||| |||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| |||||||||||||| |    
T  4757662 tgatgataaaacggtgggaagaacggatgttgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcgacagtagccattg 4757563  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| ||||  |  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | ||    
T  4757562 attgaccggctccggctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagcttt 4757463  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  4757462 ctcaaacacaatgat 4757448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 27360305 - 27360519
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| ||||| |||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || || ||||||||||    
T  27360305 tgatgataaaacggtgggaagaacggatgttgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacggtagccatag 27360404  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||  |||| |||||||| ||| | ||    
T  27360405 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgatgcactcgtagaagattcagcttt 27360504  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  27360505 ctcaaacacaatgat 27360519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 27450648 - 27450862
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| ||||| |||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || || ||||||||||    
T  27450648 tgatgataaaacggtgggaagaacggatgttgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacggtagccatag 27450747  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||  |||| |||||||| ||| | ||    
T  27450748 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgatgcactcgtagaagattcagcttt 27450847  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  27450848 ctcaaacacaatgat 27450862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 218
Target Start/End: Complemental strand, 29572914 - 29572700
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  29572914 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccattg 29572815  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| || ||||| |||||  |||| |||||||| ||| | ||    
T  29572814 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgcactcgtagaagattcagcttt 29572715  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  29572714 ctcaaacacaatgat 29572700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 179
Target Start/End: Complemental strand, 17025163 - 17024988
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  || || ||||| | ||| || |||||||||||||    
T  17025163 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgggctgcattgataggagcaacagtagccatag 17025064  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
       |||| |||| ||  || |||||||| || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  17025063 cttgaccggctccagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 17024988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 30558311 - 30558525
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||| ||   ||| | |||||  ||||| |  ||||| ||||| |  || || || |||||||| |    
T  30558311 tgatgataaaacggtgggaagaacggatgctgagaatatggcatatatgggtatgacggaggcatttgagctgcattgatgggagcaacggtagccatgg 30558410  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | ||    
T  30558411 attgaccggctccagctgacaccatccccacttcagtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagcttt 30558510  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  30558511 ctcaaacacaatgat 30558525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 179
Target Start/End: Complemental strand, 27007613 - 27007438
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| |||||||||||||||||||||||||||||||||||   |||   |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  27007613 tgatgataaaacggtgggaagaatggatgctgagaatacggcatatataggtatgacggaggcatttgagctgcattgataggagcaacagtagccattg 27007514  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||    
T  27007513 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcga 27007438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 179
Target Start/End: Complemental strand, 29549379 - 29549204
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| ||||||||||| |||||  |||| | |||||  ||||| |  ||||| ||||| | ||| || || ||||||||||    
T  29549379 tgatgataaaacggtgggaagaacggatgctgagagtacggcacatatgggtatgacggaggcatttgagctgcattgataggagcaacggtagccatag 29549280  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  || ||||| || || || ||||| ||||||||||| || ||||| ||||||||||||||    
T  29549279 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtgatgtccattaccatacctcttcga 29549204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 180
Target Start/End: Original strand, 16944322 - 16944498
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  16944322 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccattg 16944421  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 180  Q
    |  | || |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  16944422 attgcccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 16944498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 176
Target Start/End: Original strand, 24304913 - 24305085
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||| || || ||||| |||||||||||||||||  |||| | |||||  ||||| |  || |||||||| | ||| |||||||||||||| |    
T  24304913 tgatgataaaatggcggaaagaagggatgctgagaatacggcacatatgggtatgacggaggcatttgggcagcattgataggagcgacagtagccatgg 24305012  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 176  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| |||||||||||    
T  24305013 attgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctctt 24305085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 180
Target Start/End: Complemental strand, 29501307 - 29501131
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| |||||||||||||||||||||||||||||||||||   ||| | ||| |  ||||| |  ||||| ||||| | ||| || || |||||||| |    
T  29501307 tgatgataaaacggtgggaagaatggatgctgagaatacggcatatatgggtacgacggaggcatttgagctgcattgataggagcaacggtagccatgg 29501208  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 180  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  29501207 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 29501131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 180
Target Start/End: Original strand, 34463656 - 34463832
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||||||||||||||||||||| |||||||||||||||||    || | |||||  ||||| |  ||||| ||||| | ||| || ||||||| ||| |    
T  34463656 tgatggtaaaacggtgggaagaaaggatgctgagaatacggcatgtatgggtatgacggaggcatttgagctgcattgataggagcaacagtagtcattg 34463755  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 180  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  34463756 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 34463832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 179
Target Start/End: Complemental strand, 26918281 - 26918106
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||| || || ||||| |||||||||||||||||  |||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  26918281 tgatgataaaatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccatgg 26918182  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  26918181 attgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 26918106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 26777922 - 26778136
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||    || | |||||  ||||| |  || || | ||| | ||| || ||||||||||| |    
T  26777922 tgatgataaaacggtgggaagaaaggatgctgagaatacggcatgtatgggtatgacggaggcatttgggctgtattgataggtgcaacagtagccattg 26778021  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  | || |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  | || |||||||| ||| | ||    
T  26778022 attgcccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcgctcgtagaagattcagcttt 26778121  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  26778122 ctcaaacacaatgat 26778136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 176
Target Start/End: Original strand, 15424612 - 15424784
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||| || || ||||| ||||||||||||||||| ||||| | |||||  ||||| |  || || ||||| | ||| || ||||||||||| |    
T  15424612 tgatgataaaatggcggaaagaaaggatgctgagaatacggcgcatatgggtatgacggaggcatttgggctgcattgataggagcaacagtagccatgg 15424711  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 176  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| |||||||||||    
T  15424712 attgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctctt 15424784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 180
Target Start/End: Complemental strand, 16674028 - 16673852
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||||||||||||||||||||| ||||||||||| |||||   ||| |  ||||  ||||| |  ||||| ||||| | ||| || || ||||| || |    
T  16674028 tgatggtaaaacggtgggaagaacggatgctgagagtacggcatatatggatatgacggaggcatttgagctgcattgataggagcaacggtagctattg 16673929  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 180  Q
    |  |||| |||| ||  || |||||||| || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  16673928 attgaccggctccagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 16673852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 179
Target Start/End: Complemental strand, 3695964 - 3695789
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||    || | |||||  ||||| |  ||||| ||||| | ||| || || |||||||| |    
T  3695964 tgatgataaaacggtgggaagaaaggatgctgagaatacggcatgtatgggtatgacggaggcatttgagctgcattgataggagcaacggtagccattg 3695865  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||    
T  3695864 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcga 3695789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 179
Target Start/End: Complemental strand, 4772898 - 4772723
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| ||||| |||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || || ||||||||||    
T  4772898 tgatgataaaacggtgggaagaacggatgttgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacggtagccatag 4772799  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| ||||  |  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||    
T  4772798 attgaccggctccggctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcga 4772723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 179
Target Start/End: Complemental strand, 26988902 - 26988727
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||| || || ||||| |||||||||||||||||  |||| | |||||  ||||| |  || || ||||| | ||| || ||||||||||| |    
T  26988902 tgatgataaaatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgggctgcattgataggagcaacagtagccatgg 26988803  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  26988802 attgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 26988727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 179
Target Start/End: Complemental strand, 27044291 - 27044116
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  || || ||||| | ||| || || |||||||| |    
T  27044291 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgggctgcattgataggagcaacggtagccatgg 27044192  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||    
T  27044191 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcga 27044116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 179
Target Start/End: Complemental strand, 27485018 - 27484843
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || || |||||||| |    
T  27485018 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacggtagccattg 27484919  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| || || ||||||||    
T  27484918 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtatctcttcga 27484843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 20160605 - 20160508
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccat 101  Q
    ||||||||||| |||||  |||| ||||| ||||| ||  ||||| |   ||||||||||||||  |||| ||||||||||||||| |||||||||||    
T  20160605 tgatggtaaaatggtggatagaaaggatgttgagagtaatgtgcaaacaggtatggtggaggtaattgagtagcattaacaggggcaacagtagccat 20160508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 22172226 - 22172323
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccat 101  Q
    ||||||||||| |||||  |||| ||||| ||||| ||  ||||| |   ||||||||||||||  |||| ||||||||||||||| |||||||||||    
T  22172226 tgatggtaaaatggtggatagaaaggatgttgagagtaatgtgcaaacaggtatggtggaggtaattgagtagcattaacaggggcaacagtagccat 22172323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 176
Target Start/End: Complemental strand, 26999974 - 26999802
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||| || || ||||| |||||||||||||||||  |||| | |||||  ||||| |  || || ||||| | ||| || ||||||||||| |    
T  26999974 tgatgataaaatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgggctgcattgataggagcaacagtagccatgg 26999875  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 176  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| |||||||||||    
T  26999874 attgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctctt 26999802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 179
Target Start/End: Complemental strand, 16749755 - 16749580
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||| || || ||||| |||||||||||||||||  |||| | |||||  ||||  |  ||||| || || | ||| || ||||||||||| |    
T  16749755 tgatgataaaatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggagacatttgagctgcgttgataggagcaacagtagccatgg 16749656  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  16749655 attgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 16749580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 179
Target Start/End: Original strand, 26116714 - 26116889
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| | |||||||||||||||   ||| | |||||  ||||| |  ||||| | ||| | ||| || || ||||| ||||    
T  26116714 tgatgataaaacggtgggaagaacgaatgctgagaatacggcatatatgggtatgacggaggcatttgagctgtattgataggagcaacggtagctatag 26116813  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||    
T  26116814 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcga 26116889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 3e-29; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 37358904 - 37359129
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || || ||||||||||    
T  37358904 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacggtagccatag 37359003  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | ||    
T  37359004 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagcttt 37359103  T
Q  204 ctcaaatacaatgataccctctctga 229  Q
    ||||||||||||||| || |||||||    
T  37359104 ctcaaatacaatgatcccatctctga 37359129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 215
Target Start/End: Original strand, 15759106 - 15759317
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  15759106 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccattg 15759205  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  ||||||||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||| |||||| |||||| ||| | ||    
T  15759206 attgacctgctccagctgacaccatccccacttcagtttctttcttcttgtggtgtccattaccatacctcttcgacgcacttgcagaagattcagcttt 15759305  T
Q  204 ctcaaatacaat 215  Q
    |||||| |||||    
T  15759306 ctcaaacacaat 15759317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 31826668 - 31826882
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  31826668 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccattg 31826767  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | ||    
T  31826768 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagcttt 31826867  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  31826868 ctcaaacacaatgat 31826882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 227
Target Start/End: Complemental strand, 37754881 - 37754658
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| |  ||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  37754881 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatggatatgacggaggcatttgagctgcattgataggtgcaacagtagccattg 37754782  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||| |||||| |||||| ||| | ||    
T  37754781 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgacgcacttgcagaagattcagcttt 37754682  T
Q  204 ctcaaatacaatgataccctctct 227  Q
    |||||| |||||||| || |||||    
T  37754681 ctcaaacacaatgatcccatctct 37754658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 218
Target Start/End: Complemental strand, 12132068 - 12131854
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  12132068 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccattg 12131969  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| || |||||||||||  |||| |||||||| ||| | ||    
T  12131968 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtacctcttcgatgcactcgtagaagattcagcttt 12131869  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  12131868 ctcaaacacaatgat 12131854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 32599718 - 32599932
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  || || ||||| | ||| || ||||||| ||| |    
T  32599718 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgggctgcattgataggagcaacagtagtcattg 32599817  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || |||||||||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | ||    
T  32599818 attgaccggctccagctgacaccatccccacttccgtttccttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagcttt 32599917  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  32599918 ctcaaacacaatgat 32599932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 37671741 - 37671955
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || || ||||||||||    
T  37671741 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacggtagccatag 37671840  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| ||||  |  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | ||    
T  37671841 attgaccggctccggctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagcttt 37671940  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  37671941 ctcaaacacaatgat 37671955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 37771248 - 37771462
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| |  || |  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  37771248 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatggatacgacggaggcatttgagctgcattgataggtgcaacagtagccattg 37771347  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | ||    
T  37771348 attgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagcttt 37771447  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  37771448 ctcaaacacaatgat 37771462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 8665724 - 8665938
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||| || || ||||| |||||||||||||||||   ||| | |||||| ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  8665724 tgatgataaaatggcggaaagaaaggatgctgagaatacggcatatatgggtatggcggaggcatttgagctgcattgataggagcaacagtagccattg 8665823  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  | || |||||||| ||| | ||    
T  8665824 attgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatacctcttcgatgcgctcgtagaagattcagcttt 8665923  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  8665924 ctcaaacacaatgat 8665938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 218
Target Start/End: Complemental strand, 24681350 - 24681136
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||| || |||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  24681350 tgatgataaaatggcgggaagaaaggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggtgcaacagtagccatgg 24681251  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | ||    
T  24681250 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagcttt 24681151  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  24681150 ctcaaacacaatgat 24681136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 218
Target Start/End: Complemental strand, 24723877 - 24723663
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||| || |||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  24723877 tgatgataaaatggcgggaagaaaggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggtgcaacagtagccatgg 24723778  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | ||    
T  24723777 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagcttt 24723678  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  24723677 ctcaaacacaatgat 24723663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 218
Target Start/End: Complemental strand, 30151931 - 30151717
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| |  || || ||||||||||| |    
T  30151931 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgatgggagcaacagtagccattg 30151832  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| || ||||| |||||  |||| |||||||| ||| | ||    
T  30151831 attgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgcactcgtagaagattcagcttt 30151732  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  30151731 ctcaaacacaatgat 30151717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 179
Target Start/End: Complemental strand, 31431341 - 31431166
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || |||||||||| ||    
T  31431341 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccacag 31431242  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||    
T  31431241 attgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcga 31431166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 18375661 - 18375875
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||| ||   ||| | |||||  ||||| |  ||||| ||||| |  || || ||||||||||| |    
T  18375661 tgatgataaaacggtgggaagaacggatgctgagaatatggcatatatgggtatgacggaggcatttgagctgcattgatgggagcaacagtagccattg 18375760  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| || ||||| |||||  |||| |||||||| ||| | ||    
T  18375761 attgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgcactcgtagaagattcagcttt 18375860  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  18375861 ctcaaacacaatgat 18375875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 218
Target Start/End: Complemental strand, 33516269 - 33516055
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||| ||   ||| | |||||  ||||| |  ||||| ||||| |  || || || |||||||| |    
T  33516269 tgatgataaaacggtgggaagaacggatgctgagaatatggcatatatgggtatgacggaggcatttgagccgcattgatgggagcaacggtagccatgg 33516170  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | ||    
T  33516169 attgaccggctccagctgacaccatccccacttcagtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagcttt 33516070  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  33516069 ctcaaacacaatgat 33516055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 176
Target Start/End: Complemental strand, 2510964 - 2510792
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  || || ||||| | ||| || || |||||||| |    
T  2510964 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgggctgcattgataggagcaacggtagccatgg 2510865  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 176  Q
    |  |||| |||| ||  ||||||||||| || || ||||| |||||||||||||| ||||| |||||||||||    
T  2510864 attgaccggctccagctgataccattcccacttccgtttctttcttcttgtggtgtccattaccatacctctt 2510792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 176
Target Start/End: Complemental strand, 9317364 - 9317192
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  9317364 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccattg 9317265  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 176  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| |||||||||||    
T  9317264 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctctt 9317192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 179
Target Start/End: Complemental strand, 5637823 - 5637648
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  5637823 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccattg 5637724  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||    
T  5637723 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcga 5637648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 179
Target Start/End: Complemental strand, 26480305 - 26480130
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  26480305 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccattg 26480206  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||    
T  26480205 attgaccggctccagctgacaccatccccacttcagtttctttcttcttgtggtgtccattaccatatctcttcga 26480130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 28960047 - 28960261
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  || ||  |||| | ||| || ||||||||| | |    
T  28960047 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgggctacattgataggtgcaacagtagccgttg 28960146  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  | || |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | ||    
T  28960147 attgcccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagcttt 28960246  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  28960247 ctcaaacacaatgat 28960261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 179
Target Start/End: Original strand, 15659009 - 15659184
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    |||||||||||||| || ||||| |||||||||||||||||  |||| |  ||||  ||||| |  ||||  ||||| | ||| || ||||||||||| |    
T  15659009 tgatggtaaaacggcggaaagaaaggatgctgagaatacggcacatatggatatgacggaggcatttgagttgcattgataggagcaacagtagccattg 15659108  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  15659109 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 15659184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 179
Target Start/End: Complemental strand, 33777400 - 33777225
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||| || || ||||| |||||||||||||||||  |||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  33777400 tgatgataaaatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccatgg 33777301  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  33777300 attgaccagctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 33777225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 179
Target Start/End: Complemental strand, 34616434 - 34616259
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  || || ||||| | ||| || |||||||||||||    
T  34616434 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgggctgcattgataggtgcaacagtagccatag 34616335  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
       |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||    
T  34616334 cttgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcga 34616259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 176
Target Start/End: Complemental strand, 6874215 - 6874043
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||  ||||| | ||| || ||||||| ||| |    
T  6874215 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagttgcattgataggagcaacagtagtcattg 6874116  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 176  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| |||||||||||    
T  6874115 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctctt 6874043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 180
Target Start/End: Original strand, 18500997 - 18501173
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||    || | |||||  ||||| |  ||||  ||||| | ||| || ||||||||||| |    
T  18500997 tgatgataaaacggtgggaagaaaggatgctgagaatacggcatgtatgggtatgacggaggcatttgagttgcattgataggagcaacagtagccattg 18501096  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 180  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  18501097 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 18501173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 180
Target Start/End: Original strand, 29967315 - 29967491
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  29967315 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccattg 29967414  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 180  Q
    |  | || |||| ||  || ||||| || || || ||||| ||||| |||||||| ||||| ||||| |||||||||    
T  29967415 attgcccggctccagctgacaccatccccacttccgtttctttctttttgtggtgtccattaccatatctcttcgac 29967491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 180
Target Start/End: Complemental strand, 30029328 - 30029152
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  30029328 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccattg 30029229  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 180  Q
    |  | || |||| ||  || ||||| || || || ||||| ||||| |||||||| ||||| ||||| |||||||||    
T  30029228 attgcccggctccagctgacaccatccccacttccgtttctttctttttgtggtgtccattaccatatctcttcgac 30029152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 180
Target Start/End: Original strand, 40473801 - 40473977
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||||||||||||||||||||| ||||||||||| |||||    |  | |||||  ||||| |  ||||| ||||| | |||||| ||||||||||| |    
T  40473801 tgatggtaaaacggtgggaagaacggatgctgagagtacggcatgtgtgggtatgacggaggcatttgagctgcattgataggggcaacagtagccattg 40473900  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 180  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| || || |||||||||    
T  40473901 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtatctcttcgac 40473977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 180
Target Start/End: Complemental strand, 43078162 - 43077986
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||    || | ||| |  ||||| |  ||||| ||||| | ||| || |||||||||||||    
T  43078162 tgatgataaaacggtgggaagaaaggatgctgagaatacggcatgtatgggtacgacggaggcatttgagctgcattgataggtgcaacagtagccatag 43078063  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 180  Q
       |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  43078062 cttgaccggctccagttgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 43077986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 179
Target Start/End: Complemental strand, 3789439 - 3789264
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| ||||||||||| |||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || || |||||||| |    
T  3789439 tgatgataaaacggtgggaagaacggatgctgagagtacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacggtagccattg 3789340  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||    
T  3789339 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcga 3789264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 179
Target Start/End: Complemental strand, 11549267 - 11549092
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||| ||||| ||||| |||||||| ||||||||  |||| | |||||  ||||| |  || || ||||| | ||| || ||||||||||| |    
T  11549267 tgatgataaaatggtggaaagaaaggatgctgtgaatacggcacatatgggtatgacggaggcatttgggctgcattgataggagcaacagtagccatgg 11549168  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  11549167 attgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 11549092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 179
Target Start/End: Original strand, 13325093 - 13325268
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| ||||| |||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || || |||||||| |    
T  13325093 tgatgataaaacggtgggaagaacggatgttgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacggtagccattg 13325192  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||    
T  13325193 attgaccagctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcga 13325268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 179
Target Start/End: Original strand, 23718237 - 23718412
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||| || || ||||| |||||||||||||||||  |||| | |||||  ||||| |  || || ||||| | ||| || ||||||||||| |    
T  23718237 tgatgataaaatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgggctgcattgataggagcaacagtagccatgg 23718336  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  23718337 attgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 23718412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 179
Target Start/End: Original strand, 23752699 - 23752874
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||| || || ||||| |||||||||||||||||  |||| | |||||  ||||| |  || || ||||| | ||| || ||||||||||| |    
T  23752699 tgatgataaaatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgggctgcattgataggagcaacagtagccatgg 23752798  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  23752799 attgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 23752874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 179
Target Start/End: Complemental strand, 30168382 - 30168207
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||| ||   ||| | |||||  ||||| |  ||||| ||||| |  || || | ||||||||| |    
T  30168382 tgatgataaaacggtgggaagaacggatgctgagaatatggcatatatgggtatgacggaggcatttgagctgcattgatgggagcaatagtagccatgg 30168283  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||    
T  30168282 attgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatatctcttcga 30168207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 33292441 - 33292346
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagcc 99  Q
    ||||| ||||||||||||||||| ||||||||||| ||||||||||| | ||| |  || || | |||||||||||| | ||| || |||||||||    
T  33292441 tgatgataaaacggtgggaagaacggatgctgagagtacggtgcataagggtaggacgggggaaactgagcagcattgataggagcaacagtagcc 33292346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 180
Target Start/End: Complemental strand, 41674622 - 41674446
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||||||||| || || ||||| |||||||||| ||||||  |||| | |||||  ||||| |  || || | ||| | ||| || ||||||||||| |    
T  41674622 tgatggtaaaatggcggaaagaaaggatgctgagcatacggcacatatgggtatgacggaggcatttgggctgtattgataggagcaacagtagccatgg 41674523  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 180  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| |||||||||||||||    
T  41674522 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgac 41674446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 179
Target Start/End: Original strand, 22999363 - 22999538
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||| || || ||||| |||||||||||||||||  |||| | |||||  ||||| |  || || ||||| | ||| || ||||||||||| |    
T  22999363 tgatgataaaatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgggctgcattgataggagcaacagtagccatgg 22999462  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  || ||||| || |  || ||||| |||||||||||||| ||||| ||||||||||||||    
T  22999463 attgaccggctccagctgacaccatccctatttccgtttctttcttcttgtggtgtccattaccatacctcttcga 22999538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 22888374 - 22888289
Alignment:
Q  16 ggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccat 101  Q
    ||||| ||||| ||||||||||| || || ||||| | ||| |  ||||||| ||| |||||||||| |||||| |||||||||||    
T  22888374 ggtggaaagaagggatgctgagagtatggcgcatatgggtacgacggaggtaactgggcagcattaataggggcaacagtagccat 22888289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 9548927 - 9548967
Alignment:
Q  139 gtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    ||||| |||||||||||||| ||||| ||||||||||||||    
T  9548927 gtttctttcttcttgtggtgtccattaccatacctcttcga 9548967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 2e-27; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 218
Target Start/End: Complemental strand, 51638121 - 51637907
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  51638121 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccattg 51638022  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||| |||||| |||||| ||| | ||    
T  51638021 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgacgcacttgcagaagattcagcttt 51637922  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  51637921 ctcaaacacaatgat 51637907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 179
Target Start/End: Complemental strand, 10962573 - 10962398
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  10962573 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccattg 10962474  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  10962473 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 10962398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 180
Target Start/End: Complemental strand, 28584884 - 28584708
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  28584884 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatacgggtatgacggaggcatttgagctgcattgataggagcaacagtagccattg 28584785  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 180  Q
    |  | || |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  28584784 attgcccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 28584708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 176
Target Start/End: Original strand, 41793660 - 41793832
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||| || |||||||| ||||| |||||||||||   ||| | |||||  ||||| |  || || ||||| | ||| || || |||||||| |    
T  41793660 tgatgataaaatggcgggaagaaaggatgttgagaatacggcatatatgggtatgacggaggcatttgggctgcattgataggagcaacggtagccatgg 41793759  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 176  Q
    |  |||| |||| ||  ||||||||||| || || ||||| |||||||||||||| ||||| |||||||||||    
T  41793760 attgaccggctccagctgataccattcccacttccgtttctttcttcttgtggtgtccattaccatacctctt 41793832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 20461014 - 20460914
Alignment:
Q  1 tattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagcca 100  Q
    |||||||| || || ||||| ||||| ||||||||||| ||  | ||||| | ||| || ||||||| ||| |||||||||| |||||| | ||||||||    
T  20461014 tattgatgatagaatggtggaaagaaaggatgctgagagtattgcgcatacgggtacggcggaggtaactgggcagcattaataggggcaatagtagcca 20460915  T
Q  101 t 101  Q
    |    
T  20460914 t 20460914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 4 - 229
Target Start/End: Complemental strand, 7841 - 7616
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || || ||||||||||    
T  7841 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacggtagccatag 7742  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||  ||  || |||||||| || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | ||    
T  7741 attgaccggctgcagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagcttt 7642  T
Q  204 ctcaaatacaatgataccctctctga 229  Q
    |||||| |||||||| || |||||||    
T  7641 ctcaaacacaatgatcccatctctga 7616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 7e-27; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 6542867 - 6543092
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  6542867 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggtgcaacagtagccattg 6542966  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | ||    
T  6542967 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagcttt 6543066  T
Q  204 ctcaaatacaatgataccctctctga 229  Q
    |||||| |||||||| || |||||||    
T  6543067 ctcaaacacaatgatcccatctctga 6543092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 218
Target Start/End: Complemental strand, 8211606 - 8211392
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| ||||||||||| ||||| ||||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  8211606 tgatgataaaacggtgggaagaacggatgctgagagtacggcgcatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccatgg 8211507  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| | ||| |||||| | ||    
T  8211506 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgcagaggactcagcttt 8211407  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  8211406 ctcaaacacaatgat 8211392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 22871267 - 22871481
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| | |||||| ||||| | ||| || |||||||||||||    
T  22871267 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatctgagctgcattgataggtgcaacagtagccatag 22871366  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| | ||| || ||| | ||    
T  22871367 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgcagaggattcagcttt 22871466  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  22871467 ctcaaacacaatgat 22871481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 22886326 - 22886540
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| | |||||| ||||| | ||| || |||||||||||||    
T  22886326 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatctgagctgcattgataggtgcaacagtagccatag 22886425  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| | ||| || ||| | ||    
T  22886426 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgcagaggattcagcttt 22886525  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  22886526 ctcaaacacaatgat 22886540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 218
Target Start/End: Complemental strand, 5013577 - 5013363
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| |  || || ||||||||||| |    
T  5013577 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgatgggagcaacagtagccattg 5013478  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| || ||||| |||||  |||| |||||||| ||| | ||    
T  5013477 attgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgcactcgtagaagattcagcttt 5013378  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  5013377 ctcaaacacaatgat 5013363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 218
Target Start/End: Complemental strand, 18225056 - 18224842
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||| ||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  18225056 tgatgataaaacggtgggaagaacggatgctgagaatatggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccattg 18224957  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| || ||||| |||||  |||| |||||||| ||| | ||    
T  18224956 attgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgcactcgtagaagattcagcttt 18224857  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  18224856 ctcaaacacaatgat 18224842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 31964866 - 31965080
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||||| |||||||| |    
T  31964866 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcgacggtagccatgg 31964965  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| ||||  |  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  | || |||||||| ||| | ||    
T  31964966 attgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcgctcgtagaagattcagcttt 31965065  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  31965066 ctcaaacacaatgat 31965080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 50134464 - 50134678
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||||| |||||||| |    
T  50134464 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcgacggtagccatgg 50134563  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| ||||  |  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  | || |||||||| ||| | ||    
T  50134564 attgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcgctcgtagaagattcagcttt 50134663  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  50134664 ctcaaacacaatgat 50134678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 215
Target Start/End: Complemental strand, 28339167 - 28338956
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||||| |||||||| |    
T  28339167 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcgacggtagccatgg 28339068  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| ||||  |  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  | || |||||||| ||| | ||    
T  28339067 attgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcgctcgtagaagattcagcttt 28338968  T
Q  204 ctcaaatacaat 215  Q
    |||||| |||||    
T  28338967 ctcaaacacaat 28338956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 4347077 - 4347291
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   | | | |||||  ||||| |  || || || || | ||| || ||||||||||| |    
T  4347077 tgatgataaaacggtgggaagaacggatgctgagaatacggcatacatgggtatgacggaggcatttgggctgcgttgataggagcaacagtagccatgg 4347176  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | ||    
T  4347177 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagcttt 4347276  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  4347277 ctcaaacacaatgat 4347291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 218
Target Start/End: Complemental strand, 4416781 - 4416567
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||  ||||| | ||| || ||||||| ||| |    
T  4416781 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagttgcattgataggagcaacagtagtcattg 4416682  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  | || |||||||| ||| | ||    
T  4416681 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcgctcgtagaagattcagcttt 4416582  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  4416581 ctcaaacacaatgat 4416567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 218
Target Start/End: Complemental strand, 5466850 - 5466636
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||| ||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || |||||||||||||    
T  5466850 tgatgataaaatggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggtgcaacagtagccatag 5466751  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| ||||  |  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||| ||  | || |||||||| ||| | ||    
T  5466750 attgaccggctccggctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctctttgatgcgctcgtagaagattcagcttt 5466651  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  5466650 ctcaaacacaatgat 5466636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 5609715 - 5609929
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| ||||||||||||||||    ||| | |||||  ||||| |  ||||| ||||| | ||| ||||| |||||||| |    
T  5609715 tgatgataaaacggtgggaagaacggatgctgagaatacgtcatatatgggtatgacggaggcatttgagctgcattgataggagcgacggtagccatgg 5609814  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| ||||  |  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||| ||| |||| |||||||| ||| | ||    
T  5609815 attgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctctttgacgcactcgtagaagattcagcttt 5609914  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  5609915 ctcaaacacaatgat 5609929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 179
Target Start/End: Original strand, 5596759 - 5596934
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| |||||||||||||||||||||||||||||||||||   ||| | ||| |  ||||| |  ||||| ||||| | ||| || || |||||||| |    
T  5596759 tgatgataaaacggtgggaagaatggatgctgagaatacggcatatatgggtacgacggaggcatttgagctgcattgataggagcaacggtagccattg 5596858  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  5596859 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 5596934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 215
Target Start/End: Complemental strand, 7996427 - 7996216
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||| || |||||||| |||||||||||||||||   ||| | |||||| ||||| |  ||||| ||||| |  || || ||||||||||| |    
T  7996427 tgatgataaaatggcgggaagaaaggatgctgagaatacggcatatatgggtatggcggaggcatttgagctgcattgatgggagcaacagtagccattg 7996328  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| | |||||| ||| | ||    
T  7996327 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgaggcactcgcagaagattcagcttt 7996228  T
Q  204 ctcaaatacaat 215  Q
    |||||| |||||    
T  7996227 ctcaaacacaat 7996216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 215
Target Start/End: Complemental strand, 10642935 - 10642724
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||| || |||||||| |||||||||||||||||   ||| | |||||| ||||| |  ||||| ||||| |  || || ||||||||||| |    
T  10642935 tgatgataaaatggcgggaagaaaggatgctgagaatacggcatatatgggtatggcggaggcatttgagctgcattgatgggagcaacagtagccattg 10642836  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| | |||||| ||| | ||    
T  10642835 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgaggcactcgcagaagattcagcttt 10642736  T
Q  204 ctcaaatacaat 215  Q
    |||||| |||||    
T  10642735 ctcaaacacaat 10642724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 215
Target Start/End: Original strand, 28116350 - 28116561
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||| || |||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || || |||||||| |    
T  28116350 tgatgataaaatggcgggaagaaaggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacggtagccatgg 28116449  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | ||    
T  28116450 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagcttt 28116549  T
Q  204 ctcaaatacaat 215  Q
    |||||| |||||    
T  28116550 ctcaaacacaat 28116561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 179
Target Start/End: Original strand, 29149148 - 29149323
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||  |||| | |||||  ||||| |  || || ||||| | ||| || | ||||||||| |    
T  29149148 tgatgataaaacggtgggaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgggctgcattgataggagcaatagtagccatgg 29149247  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  29149248 attgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 29149323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 179
Target Start/End: Complemental strand, 18330538 - 18330364
Alignment:
Q  5 gatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccataga 104  Q
    |||| ||||| ||||| ||||| |||||||||||||||||  |||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| ||    
T  18330538 gatgataaaatggtggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccatgga 18330439  T
Q  105 ccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
      |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  18330438 ttgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 18330364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 218
Target Start/End: Complemental strand, 28021143 - 28020929
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  || || | ||| | ||| || ||||||||||| |    
T  28021143 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgggctgtattgataggagcaacagtagccatgg 28021044  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  | || |||| ||  || ||||| || || || |||||||||||||||||||| || || ||||||||||| ||  |||| |||||||| ||| | ||    
T  28021043 attgcccggctccagctgacaccatccccacttccgtttccttcttcttgtggtgtccgttaccatacctctttgatgcactcgtagaagattcagcttt 28020944  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  28020943 ctcaaacacaatgat 28020929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 180
Target Start/End: Original strand, 20577255 - 20577431
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||||||||||||||||||||| |||||||||||||||||    || | |||||  ||||| |  ||||  ||||| | ||| || ||||||||||| |    
T  20577255 tgatggtaaaacggtgggaagaaaggatgctgagaatacggcatgtatgggtatgacggaggcatttgagttgcattgataggagcaacagtagccattg 20577354  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 180  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  20577355 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 20577431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 180
Target Start/End: Complemental strand, 24328024 - 24327848
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  24328024 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccattg 24327925  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 180  Q
    |  | || |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  24327924 attgcccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 24327848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 180
Target Start/End: Complemental strand, 48465780 - 48465604
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||||||||||||||||||||| ||||||||||| |||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || || ||||| || |    
T  48465780 tgatggtaaaacggtgggaagaacggatgctgagagtacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacggtagctattg 48465681  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 180  Q
    |  |||| |||| ||  || |||||||| || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  48465680 attgaccggctccagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 48465604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 179
Target Start/End: Original strand, 18277445 - 18277620
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| ||||||||||| |||||  |||| | |||||  ||||| |  ||||  ||||| | ||| || ||||| ||||| |    
T  18277445 tgatgataaaacggtgggaagaacggatgctgagagtacggcacatatgggtatgacggaggcatttgagttgcattgataggagcaacagtggccattg 18277544  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  18277545 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 18277620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 179
Target Start/End: Original strand, 18292746 - 18292921
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| ||||||||||| |||||  |||| | |||||  ||||| |  ||||  ||||| | ||| || ||||| ||||| |    
T  18292746 tgatgataaaacggtgggaagaacggatgctgagagtacggcacatatgggtatgacggaggcatttgagttgcattgataggagcaacagtggccattg 18292845  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  18292846 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 18292921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 179
Target Start/End: Original strand, 18308047 - 18308222
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| ||||||||||| |||||  |||| | |||||  ||||| |  ||||  ||||| | ||| || ||||| ||||| |    
T  18308047 tgatgataaaacggtgggaagaacggatgctgagagtacggcacatatgggtatgacggaggcatttgagttgcattgataggagcaacagtggccattg 18308146  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  18308147 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 18308222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 32439022 - 32438927
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagcc 99  Q
    ||||| ||||||||||||||||| ||||||||||| ||||||||||| | ||| |  || || | |||||||||||| ||||| || |||||||||    
T  32439022 tgatgataaaacggtgggaagaacggatgctgagagtacggtgcataagggtaggacgggggaaactgagcagcattgacaggagcaacagtagcc 32438927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 179
Target Start/End: Complemental strand, 35880631 - 35880456
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||| || || ||||| |||||||||||||||||  |||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  35880631 tgatgataaaatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccatgg 35880532  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  35880531 attgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 35880456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 179
Target Start/End: Complemental strand, 47023318 - 47023143
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||    || | |||||  ||||| |  ||||  ||||| | ||| || ||||||||||| |    
T  47023318 tgatgataaaacggtgggaagaaaggatgctgagaatacggcatgtatgggtatgacggaggcatttgagttgcattgataggagcaacagtagccattg 47023219  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  47023218 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 47023143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 180
Target Start/End: Complemental strand, 7073077 - 7072901
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||||||||| || || ||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  7073077 tgatggtaaaatggcggaaagaaaggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccatgg 7072978  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 180  Q
    |  |||  |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| |||||||||||||||    
T  7072977 attgactggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgac 7072901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 180
Target Start/End: Original strand, 11110754 - 11110930
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||    || | |||||  ||||| |  ||||  ||||| | ||| || || |||||||| |    
T  11110754 tgatgataaaacggtgggaagaaaggatgctgagaatacggcatgtatgggtatgacggaggcatttgagttgcattgataggagcaacggtagccatgg 11110853  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 180  Q
    |  |||| |||| ||  || ||||| || || || |||||||||||||||||||| ||||| ||||| |||||||||    
T  11110854 attgaccggctccagctgacaccatccccacttccgtttccttcttcttgtggtgtccattaccatatctcttcgac 11110930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 176
Target Start/End: Original strand, 15741475 - 15741647
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||| || || ||||| |||||||||||||||||  |||| | |||||  ||||| |  || || ||||| | ||| || ||||||||||| |    
T  15741475 tgatgataaaatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgggctgcattgataggagcaacagtagccatgg 15741574  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 176  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| |||||||||||||||||    
T  15741575 attgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattgccatacctctt 15741647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 180
Target Start/End: Complemental strand, 18242592 - 18242416
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || || |||||||| |    
T  18242592 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacggtagccattg 18242493  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 180  Q
    |  |||| ||||  |  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  18242492 attgaccggctccggctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 18242416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 180
Target Start/End: Original strand, 36997482 - 36997658
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||    || | |||||  ||||| |  ||||| ||||| | ||| || || |||||||| |    
T  36997482 tgatgataaaacggtgggaagaaaggatgctgagaatacggcatgtatgggtatgacggaggcatttgagctgcattgataggagcaacggtagccattg 36997581  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 180  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  36997582 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 36997658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 180
Target Start/End: Complemental strand, 51781876 - 51781700
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||||||||||||||||||||| ||||||||||| |||||    || | |||||  ||||| |  ||||| ||||| | ||| || || |||||||| |    
T  51781876 tgatggtaaaacggtgggaagaacggatgctgagagtacggcatgtatgggtatgacggaggcatttgagctgcattgataggagcaacggtagccattg 51781777  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 180  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  51781776 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 51781700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 179
Target Start/End: Complemental strand, 4721496 - 4721321
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||| || || |||||  ||||||||||||||||  |||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  4721496 tgatgataaaatggcggaaagaaaagatgctgagaatacggcacatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccatgg 4721397  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  4721396 attgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 4721321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 4893078 - 4892983
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagcc 99  Q
    ||||| ||||||||||||||||| ||||||||||| ||||||||||| | ||| |  || || | |||||||||||| | ||| || |||||||||    
T  4893078 tgatgataaaacggtgggaagaacggatgctgagagtacggtgcataagggtaggacgggggaaactgagcagcattgataggagcaacagtagcc 4892983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 17985349 - 17985563
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||| ||   ||| | |||||  ||||| |  ||||| ||||| |  || || || |||||||| |    
T  17985349 tgatgataaaacggtgggaagaacggatgctgagaatatggcatatatgggtatgacggaggcatttgagctgcattgatgggagcaacggtagccatgg 17985448  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| || ||||| || ||  |||| |||||||| ||| | ||    
T  17985449 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtacctttttgatgcactcgtagaagattcagcttt 17985548  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  17985549 ctcaaacacaatgat 17985563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 29665378 - 29665592
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| ||||||||||| |||||    || | |||||  ||||| |  ||||| ||||| | ||| || || |||||||| |    
T  29665378 tgatgataaaacggtgggaagaacggatgctgagagtacggcatgtatgggtatgacggaggcatttgagctgcattgataggagcaacggtagccattg 29665477  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||   |||| |||||||| |||   ||    
T  29665478 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcggtgcactcgtagaagattcagtttt 29665577  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  29665578 ctcaaacacaatgat 29665592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 16626896 - 16626993
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccat 101  Q
    ||||| || |||||||| ||||| ||||||||||| ||  ||||||| | ||| |  ||||||| ||| |||||||||| |||||| |||||||||||    
T  16626896 tgatgatagaacggtggaaagaagggatgctgagagtattgtgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagccat 16626993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 180
Target Start/End: Complemental strand, 51796965 - 51796788
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||||||||||||||||||||| ||||||||||| |||||    || | |||||  ||||| |  ||||| ||||| | ||| || || |||||||| |    
T  51796965 tgatggtaaaacggtgggaagaacggatgctgagagtacggcatgtatgggtatgacggaggcatttgagctgcattgataggagcaacggtagccattg 51796866  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtg-gccattgccatacctcttcgac 180  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| |||||| ||||| |||||||||    
T  51796865 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtgccattaccatatctcttcgac 51796788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 176
Target Start/End: Original strand, 4797046 - 4797218
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||| || || ||||| |||||||||||||||||  |||| | |||||  ||||| |  || || ||||| | ||| || ||||||||||| |    
T  4797046 tgatgataaaatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgggctgcattgataggagcaacagtagccatgg 4797145  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 176  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| |||||||||||    
T  4797146 attgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctctt 4797218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 18051109 - 18050955
Alignment:
Q  22 aagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatagaccgacctgctctagagg 121  Q
    ||||| ||||| ||||||||||| ||||| | |||||  ||||| |  || || ||||| | ||| || ||||||||||| ||  |||| |||| ||  |    
T  18051109 aagaaaggatgttgagaatacggcgcatatgggtatgacggaggcatttgggctgcattgataggagcaacagtagccatggattgaccggctccagctg 18051010  T
Q  122 ataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 176  Q
    | ||||| || || || ||||| |||||||||||||| ||||| |||||||||||    
T  18051009 acaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctctt 18050955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 179
Target Start/End: Complemental strand, 6192163 - 6192006
Alignment:
Q  22 aagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatagaccgacctgctctagagg 121  Q
    ||||| |||||||||||||||||  |||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| ||  |||| |||| |   |    
T  6192163 aagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccatggattgaccggctccaactg 6192064  T
Q  122 ataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    | ||||| |  || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  6192063 acaccatccatacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 6192006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 22387968 - 22388065
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccat 101  Q
    ||||| ||||||| ||||||||| ||||||||||| || |||||||| | ||| |  || || | |||||||||||| | ||| || |||||||||||    
T  22387968 tgatgataaaacgatgggaagaacggatgctgagagtatggtgcataagggtaggacgggggaaactgagcagcattgataggagcaacagtagccat 22388065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 4e-25; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 4145361 - 4145575
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  4145361 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccattg 4145460  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  | || |||||||| ||| | ||    
T  4145461 attgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatacctcttcgatgcgctcgtagaagattcagcttt 4145560  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  4145561 ctcaaacacaatgat 4145575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 215
Target Start/End: Complemental strand, 45387248 - 45387037
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||| || |||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  45387248 tgatgataaaatggcgggaagaaaggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccattg 45387149  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||| |||||| |||||| ||| | ||    
T  45387148 attgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatacctcttcgacgcacttgcagaagattcagcttt 45387049  T
Q  204 ctcaaatacaat 215  Q
    |||||| |||||    
T  45387048 ctcaaacacaat 45387037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 218
Target Start/End: Complemental strand, 3445199 - 3444985
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||||||||||||||||||||| ||||||||||| |||||    || | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  3445199 tgatggtaaaacggtgggaagaacggatgctgagagtacggcatgtatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccattg 3445100  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | ||    
T  3445099 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagcttt 3445000  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  3444999 ctcaaacacaatgat 3444985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 26275332 - 26275546
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  26275332 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccattg 26275431  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| || |||||||||||  |||| |||||||| ||| | ||    
T  26275432 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtacctcttcgatgcactcgtagaagattcagcttt 26275531  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  26275532 ctcaaacacaatgat 26275546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 26320107 - 26320321
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  26320107 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccattg 26320206  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| || |||||||||||   ||| |||||||| ||| | ||    
T  26320207 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtacctcttcgatgtactcgtagaagattcagcttt 26320306  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  26320307 ctcaaacacaatgat 26320321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 26485982 - 26486196
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||||||||||||||||||||| ||||||||||| |||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || || ||||| || |    
T  26485982 tgatggtaaaacggtgggaagaacggatgctgagagtacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacggtagctattg 26486081  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | ||    
T  26486082 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagcttt 26486181  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  26486182 ctcaaacacaatgat 26486196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 31564637 - 31564851
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| ||||| |||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || || ||||||||||    
T  31564637 tgatgataaaacggtgggaagaacggatgttgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacggtagccatag 31564736  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||  |||| |||||||| ||| | ||    
T  31564737 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgatgcactcgtagaagattcagcttt 31564836  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  31564837 ctcaaacacaatgat 31564851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 179
Target Start/End: Complemental strand, 9618556 - 9618381
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  9618556 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccattg 9618457  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||    
T  9618456 attgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatatctcttcga 9618381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 24592779 - 24592993
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  24592779 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccattg 24592878  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||| || ||  ||| || ||| | ||    
T  24592879 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgacgcatttacagaggattcagcttt 24592978  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  24592979 ctcaaacacaatgat 24592993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 16736695 - 16736912
Alignment:
Q  1 tattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagcca 100  Q
    |||||||| ||||| || || ||||| |||||||||||||||||   ||| | |||||  ||||  |  ||||| ||||| | ||| || || |||||||    
T  16736695 tattgatgataaaatggcggaaagaaaggatgctgagaatacggcatatatgggtatgacggagacatttgagctgcattgataggagcaacggtagcca 16736794  T
Q  101 tagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacc 200  Q
    | ||  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||| |||| | |||||| ||| |    
T  16736795 tggattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatatctcttcgacgcactcgcagaagattcagc 16736894  T
Q  201 cttctcaaatacaatgat 218  Q
     |||||||| ||||||||    
T  16736895 tttctcaaacacaatgat 16736912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 16751749 - 16751966
Alignment:
Q  1 tattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagcca 100  Q
    |||||||| ||||| || || ||||| |||||||||||||||||   ||| | |||||  ||||  |  ||||| ||||| | ||| || || |||||||    
T  16751749 tattgatgataaaatggcggaaagaaaggatgctgagaatacggcatatatgggtatgacggagacatttgagctgcattgataggagcaacggtagcca 16751848  T
Q  101 tagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacc 200  Q
    | ||  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||| |||| | |||||| ||| |    
T  16751849 tggattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatatctcttcgacgcactcgcagaagattcagc 16751948  T
Q  201 cttctcaaatacaatgat 218  Q
     |||||||| ||||||||    
T  16751949 tttctcaaacacaatgat 16751966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 17523440 - 17523223
Alignment:
Q  1 tattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagcca 100  Q
    |||||||| ||||| || || ||||| |||||||||||||||||   ||| | |||||  ||||  |  ||||| ||||| | ||| || || |||||||    
T  17523440 tattgatgataaaatggcggaaagaaaggatgctgagaatacggcatatatgggtatgacggagacatttgagctgcattgataggagcaacggtagcca 17523341  T
Q  101 tagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacc 200  Q
    | ||  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||| |||| | |||||| ||| |    
T  17523340 tggattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatatctcttcgacgcactcgcagaagattcagc 17523241  T
Q  201 cttctcaaatacaatgat 218  Q
     |||||||| ||||||||    
T  17523240 tttctcaaacacaatgat 17523223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 17529775 - 17529992
Alignment:
Q  1 tattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagcca 100  Q
    |||||||| ||||| || || ||||| |||||||||||||||||   ||| | |||||  ||||  |  ||||| ||||| | ||| || || |||||||    
T  17529775 tattgatgataaaatggcggaaagaaaggatgctgagaatacggcatatatgggtatgacggagacatttgagctgcattgataggagcaacggtagcca 17529874  T
Q  101 tagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacc 200  Q
    | ||  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||| |||| | |||||| ||| |    
T  17529875 tggattgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatatctcttcgacgcactcgcagaagattcagc 17529974  T
Q  201 cttctcaaatacaatgat 218  Q
     |||||||| ||||||||    
T  17529975 tttctcaaacacaatgat 17529992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 180
Target Start/End: Original strand, 26538111 - 26538287
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||||||||||||||||||||| ||||||||||| |||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || || ||||| || |    
T  26538111 tgatggtaaaacggtgggaagaacggatgctgagagtacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacggtagctattg 26538210  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 180  Q
    |  |||| |||| ||  || |||||||| || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  26538211 attgaccggctccagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 26538287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 179
Target Start/End: Complemental strand, 5127897 - 5127722
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||| || || ||||| |||||||||||||||||  |||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  5127897 tgatgataaaatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccatgg 5127798  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  5127797 attgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 5127722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 179
Target Start/End: Complemental strand, 31124816 - 31124641
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || || |||||||| |    
T  31124816 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacggtagccattg 31124717  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||    
T  31124716 attgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatatctcttcga 31124641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 218
Target Start/End: Complemental strand, 26435162 - 26434948
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| ||||||||||| |||||   ||| | |||||  ||||| |  ||||| ||| | | ||| || ||||| ||||| |    
T  26435162 tgatgataaaacggtgggaagaacggatgctgagagtacggcatatatgggtatgacggaggcatttgagctgcactgataggagcaacagtggccatgg 26435063  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    || |||| ||||  |  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||   |||| |||||||| ||| | ||    
T  26435062 actgaccggctcctgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcggtgcactcgtagaagattcagcttt 26434963  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  26434962 ctcaaacacaatgat 26434948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 5159427 - 5159330
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccat 101  Q
    ||||| ||||||||||||||||| ||||||||||| ||||||||||| | ||| |  || || | |||||||||||| | ||| || |||||||||||    
T  5159427 tgatgataaaacggtgggaagaacggatgctgagagtacggtgcataagggtaggacgggggaaactgagcagcattgataggagcaacagtagccat 5159330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 180
Target Start/End: Complemental strand, 11441465 - 11441289
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||    || | |||||  ||||| |  ||||| ||||| | ||| || || |||||||| |    
T  11441465 tgatgataaaacggtgggaagaaaggatgctgagaatacggcatgtatgggtatgacggaggcatttgagctgcattgataggagcaacggtagccattg 11441366  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 180  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  11441365 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 11441289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 176
Target Start/End: Complemental strand, 16041219 - 16041059
Alignment:
Q  16 ggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatagaccgacctgctc 115  Q
    ||||| ||||| ||||||||||| || || ||||| | ||| |  ||||||| ||| |||||||||| |||||| ||||||||||| ||  |||| ||||    
T  16041219 ggtggaaagaagggatgctgagagtatggcgcatatgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatggattgaccggctc 16041120  T
Q  116 tagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 176  Q
      |  |||||||| || || |||||||| |||||||| || || || || |||||||||||    
T  16041119 cggcagataccatccctacttctgtttctttcttcttatgatgaccgttaccatacctctt 16041059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 179
Target Start/End: Original strand, 26670152 - 26670327
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || || ||||| || |    
T  26670152 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacggtagctattg 26670251  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||    
T  26670252 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcga 26670327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 5147578 - 5147792
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| ||||||||||| |||||   ||| |  ||||  ||||| |  ||||| ||||| | ||| || |  |||||||| |    
T  5147578 tgatgataaaacggtgggaagaacggatgctgagagtacggcatatatggatatgacggaggcatttgagctgcattgataggagcaatggtagccatgg 5147677  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  || | | |||||| ||| | ||    
T  5147678 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcattcgcagaagattcagcttt 5147777  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  5147778 ctcaaacacaatgat 5147792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 176
Target Start/End: Complemental strand, 2154478 - 2154306
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||| || || ||||| |||||||||||||||||  |||| | |||||  ||||| |  || || ||||| | ||| || ||||||||||| |    
T  2154478 tgatgataaaatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgggctgcattgataggagcaacagtagccatgg 2154379  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 176  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| |||||||||||    
T  2154378 attgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctctt 2154306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 179
Target Start/End: Original strand, 11425014 - 11425189
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||||||||| || || ||||| |||||||||||||||||   ||| | |||||  ||||| |  || ||  |||| | ||| || ||||||||||| |    
T  11425014 tgatggtaaaatggcggaaagaaaggatgctgagaatacggcatatatgggtatgacggaggcatttgggctacattgataggagcaacagtagccatgg 11425113  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  11425114 attgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 11425189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 16503636 - 16503790
Alignment:
Q  22 aagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatagaccgacctgctctagagg 121  Q
    ||||| ||||||||||| ||||| ||||| | |||||  ||||| |  || |||||||||| ||| || ||||||||||| ||  |||| ||||  |  |    
T  16503636 aagaaaggatgctgagagtacggcgcatatgggtatgacggaggcatttgggcagcattaataggagcaacagtagccatggattgaccggctccggcag 16503735  T
Q  122 ataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 176  Q
    | ||||| || || || ||||| |||||||||||||| || || |||||||||||    
T  16503736 acaccatccctacttccgtttctttcttcttgtggtgtccgttaccatacctctt 16503790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 16518672 - 16518826
Alignment:
Q  22 aagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatagaccgacctgctctagagg 121  Q
    ||||| ||||||||||| ||||| ||||| | |||||  ||||| |  || |||||||||| ||| || ||||||||||| ||  |||| ||||  |  |    
T  16518672 aagaaaggatgctgagagtacggcgcatatgggtatgacggaggcatttgggcagcattaataggagcaacagtagccatggattgaccggctccggcag 16518771  T
Q  122 ataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 176  Q
    | ||||| || || || ||||| |||||||||||||| || || |||||||||||    
T  16518772 acaccatccctacttccgtttctttcttcttgtggtgtccgttaccatacctctt 16518826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 4e-25; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 31126870 - 31127084
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||| ||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  31126870 tgatgataaaacggtgggaagaacggatgctgagaatatggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccattg 31126969  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | ||    
T  31126970 attgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagcttt 31127069  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  31127070 ctcaaacacaatgat 31127084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 218
Target Start/End: Complemental strand, 21969620 - 21969406
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| |||||||| |||||||| |||||||||||||||||   ||| | |||||| ||||| |  ||||| ||||| |  || || ||||||||||| |    
T  21969620 tgatgataaaacggcgggaagaaaggatgctgagaatacggcatatatgggtatggcggaggcatttgagctgcattgatgggagcaacagtagccattg 21969521  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| || ||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | ||    
T  21969520 attgaccggctccagctgacaccatccccacttccgtttcttttttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagcttt 21969421  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  21969420 ctcaaacacaatgat 21969406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 218
Target Start/End: Complemental strand, 54833309 - 54833095
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| ||||||||||| |||||  |||| | |||||  ||||| |  ||||| ||||| | ||| || ||||| ||||| |    
T  54833309 tgatgataaaacggtgggaagaacggatgctgagagtacggcacatatgggtatgacggaggcatttgagctgcattgataggagcaacagtggccatgg 54833210  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| ||||  |  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||| |||| | |||||| ||| | ||    
T  54833209 attgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgacgcactcgcagaagattcagcttt 54833110  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  54833109 ctcaaacacaatgat 54833095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 179
Target Start/End: Complemental strand, 19373180 - 19373005
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| ||||||||||| |||||  |||| | |||||  ||||| |  ||||| ||||| | ||| || || ||||||||||    
T  19373180 tgatgataaaacggtgggaagaacggatgctgagagtacggcacatatgggtatgacggaggcatttgagctgcattgataggagcaacggtagccatag 19373081  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  19373080 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 19373005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 218
Target Start/End: Complemental strand, 30753661 - 30753447
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||| || |||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  30753661 tgatgataaaatggcgggaagaaaggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggtgcaacagtagccatgg 30753562  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || | ||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | ||    
T  30753561 attgaccggctccagctgacatcatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagcttt 30753462  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  30753461 ctcaaacacaatgat 30753447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 40105990 - 40106204
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  40105990 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccattg 40106089  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| | ||| || ||||| |||||  |||| |||||||| ||| | ||    
T  40106090 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtctattaccgtaccttttcgatgcactcgtagaagattcagcttt 40106189  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  40106190 ctcaaacacaatgat 40106204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 180
Target Start/End: Complemental strand, 39850542 - 39850366
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||||||||||||||||||||| ||||||||||| |||||    || | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  39850542 tgatggtaaaacggtgggaagaacggatgctgagagtacggcatgtatgggtatgacggaggcatttgagctgcattgataggtgcaacagtagccattg 39850443  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 180  Q
    |  |||| |||| ||  || |||||||| || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  39850442 attgaccggctccagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 39850366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 218
Target Start/End: Complemental strand, 14098460 - 14098246
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||| ||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  14098460 tgatgataaaacggtgggaagaacggatgctgagaatatggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccattg 14098361  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||| || ||  ||| || ||| | ||    
T  14098360 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgacgcatttacagaggattcagcttt 14098261  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  14098260 ctcaaacacaatgat 14098246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 27163669 - 27163883
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||| || |||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| |  || || ||||||||||| |    
T  27163669 tgatgataaaatggcgggaagaaaggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgatgggagcaacagtagccattg 27163768  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| || ||||| |||||  |||| |||||||| ||| | ||    
T  27163769 attgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgcactcgtagaagattcagcttt 27163868  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  27163869 ctcaaacacaatgat 27163883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 176
Target Start/End: Complemental strand, 14664937 - 14664765
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||| || || ||||| ||||||||||||||||||||||| | |||||  ||||| |  || |||||||| | ||| || ||||||||||| |    
T  14664937 tgatgataaaatggcggaaagaaaggatgctgagaatacggtgcatatgggtatgacggaggcatttgggcagcattgataggagcaacagtagccatgg 14664838  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 176  Q
    |  |||| ||||  |  || ||||| || || || ||||| |||||||||||||| ||||| |||||||||||    
T  14664837 attgaccagctccggcagacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctctt 14664765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 180
Target Start/End: Original strand, 18800974 - 18801150
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||| || |||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || |||||||||||||    
T  18800974 tgatgataaaatggcgggaagaaaggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggtgcaacagtagccatag 18801073  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 180  Q
       |||| |||| ||  || ||||| || || |||||||| |||||||||||||| ||||| ||||| |||||||||    
T  18801074 cttgaccggctccagctgacaccatccccacttctgtttctttcttcttgtggtgtccattaccatatctcttcgac 18801150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 179
Target Start/End: Original strand, 14763656 - 14763831
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| ||||||||||| |||||  |||| | |||||  ||||| |  ||||  ||||| | ||| || ||||| ||||| |    
T  14763656 tgatgataaaacggtgggaagaacggatgctgagagtacggcacatatgggtatgacggaggcatttgagttgcattgataggagcaacagtggccattg 14763755  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  14763756 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 14763831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 24112584 - 24112489
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagcc 99  Q
    ||||| ||||||||||||||||| ||||||||||| ||||||||||| | ||| |  || || | |||||||||||| ||||| || |||||||||    
T  24112584 tgatgataaaacggtgggaagaacggatgctgagagtacggtgcataagggtaggacgggggaaactgagcagcattgacaggagcaacagtagcc 24112489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 34189309 - 34189404
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagcc 99  Q
    ||||| ||||||||||||||||| ||||||||||| ||||||||||| | ||| |  || || | |||||||||||| | ||| ||||||||||||    
T  34189309 tgatgataaaacggtgggaagaacggatgctgagagtacggtgcataagggtaggacgggggaaactgagcagcattgataggagcgacagtagcc 34189404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 218
Target Start/End: Complemental strand, 5005654 - 5005575
Alignment:
Q  139 gtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacccttctcaaatacaatgat 218  Q
    ||||| |||||||||||||| ||||| |||||||||||||||  ||| | |||||| ||| | |||||||| ||||||||    
T  5005654 gtttctttcttcttgtggtgtccattaccatacctcttcgacgtactcgcagaagattcagctttctcaaacacaatgat 5005575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 179
Target Start/End: Original strand, 24592663 - 24592838
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||| || || ||||| |||||||||||||||||  |||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  24592663 tgatgataaaatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccatgg 24592762  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  || ||||| || |  || ||||| |||||||||||||| ||||| ||||||||||||||    
T  24592763 attgaccggctccagctgacaccatccctatttccgtttctttcttcttgtggtgtccattaccatacctcttcga 24592838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 179
Target Start/End: Original strand, 36344864 - 36345039
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||| ||||||| ||||||||||| |||||  |||| | |||||  ||||| |  ||||  ||||| | ||| || ||||| ||||| |    
T  36344864 tgatgataaaacggtaggaagaacggatgctgagagtacggcacatatgggtatgacggaggcatttgagttgcattgataggagcaacagtggccattg 36344963  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  36344964 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 36345039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 152
Target Start/End: Complemental strand, 1900167 - 1900031
Alignment:
Q  16 ggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatagaccgacctgctc 115  Q
    ||||| ||||| ||||||||||| || || ||||| | ||| |  ||||||| ||| |||||||||| |||||| ||||||||||| ||  |||| ||||    
T  1900167 ggtggaaagaagggatgctgagagtatggcgcatatgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatggattgaccggctc 1900068  T
Q  116 tagaggataccattccaacctctgtttccttcttctt 152  Q
      |  |||||||| || || |||||||| ||||||||    
T  1900067 cggcagataccatccctacttctgtttctttcttctt 1900031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 180
Target Start/End: Original strand, 33674162 - 33674338
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||||||||| ||||||||||| ||||||||||| |||||    || | |||||  ||||| |  ||||| ||||| | ||| || || |||||||| |    
T  33674162 tgatggtaaaatggtgggaagaacggatgctgagagtacggcatgtatgggtatgacggaggcatttgagctgcattgataggagcaacggtagccattg 33674261  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 180  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  33674262 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 33674338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 15227795 - 15227644
Alignment:
Q  1 tattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagcca 100  Q
    |||||||| || || ||||| ||||| ||||||||||| ||  | ||||| | ||| |  ||||||| ||| |||||||||| |||||| ||||||||||    
T  15227795 tattgatgatagaatggtggaaagaagggatgctgagagtattgcgcatacgggtacgacggaggtaactgggcagcattaataggggcaacagtagcca 15227696  T
Q  101 tagaccgacctgctctagaggataccattccaacctctgtttccttcttctt 152  Q
    | ||  |||| ||||  |  |||||||| || || |||||||| ||||||||    
T  15227695 tggattgaccagctccggcagataccatccctacttctgtttctttcttctt 15227644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0350 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 7591 - 7805
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  7591 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccattg 7690  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| || |||||||||||  |||| |||||||| ||| | ||    
T  7691 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtacctcttcgatgcactcgtagaagattcagcttt 7790  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  7791 ctcaaacacaatgat 7805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 218
Target Start/End: Complemental strand, 39889962 - 39889748
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||| ||||| |    
T  39889962 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacagtggccatgg 39889863  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | ||    
T  39889862 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagcttt 39889763  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  39889762 ctcaaacacaatgat 39889748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 231
Target Start/End: Original strand, 22926369 - 22926596
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||||| |||||||| |    
T  22926369 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcgacggtagccatgg 22926468  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| ||||  |  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  | || |||||||| ||| | ||    
T  22926469 attgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcgctcgtagaagattcagcttt 22926568  T
Q  204 ctcaaatacaatgataccctctctgatg 231  Q
    |||||| |||||||| || || ||||||    
T  22926569 ctcaaacacaatgattccatccctgatg 22926596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 12716946 - 12717160
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||| || |||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  12716946 tgatgataaaatggcgggaagaaaggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggtgcaacagtagccatgg 12717045  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | ||    
T  12717046 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagcttt 12717145  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  12717146 ctcaaacacaatgat 12717160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 21677523 - 21677737
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||| || || ||||| |||||||||||||||||   ||| | |||||| ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  21677523 tgatgataaaatggcggaaagaaaggatgctgagaatacggcatatatgggtatggcggaggcatttgagctgcattgataggagcaacagtagccattg 21677622  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  | || |||||||| ||| | ||    
T  21677623 attgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatacctcttcgatgcgctcgtagaagattcagcttt 21677722  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  21677723 ctcaaacacaatgat 21677737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 218
Target Start/End: Complemental strand, 31876181 - 31875967
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  31876181 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccattg 31876082  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| || ||||| |||||  |||| |||||||| ||| | ||    
T  31876081 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgcactcgtagaagattcagcttt 31875982  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  31875981 ctcaaacacaatgat 31875967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 218
Target Start/End: Complemental strand, 34861580 - 34861366
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  34861580 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccattg 34861481  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| || ||||| |||||  |||| |||||||| ||| | ||    
T  34861480 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgcactcgtagaagattcagcttt 34861381  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  34861380 ctcaaacacaatgat 34861366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 37686250 - 37686464
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  37686250 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccattg 37686349  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| || ||||| |||||  |||| |||||||| ||| | ||    
T  37686350 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgcactcgtagaagattcagcttt 37686449  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  37686450 ctcaaacacaatgat 37686464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 37701515 - 37701729
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  37701515 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccattg 37701614  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| || ||||| |||||  |||| |||||||| ||| | ||    
T  37701615 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgcactcgtagaagattcagcttt 37701714  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  37701715 ctcaaacacaatgat 37701729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 218
Target Start/End: Complemental strand, 32049698 - 32049484
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||| || |||||||| |||||||||||||||||   ||| | |||||| ||||| |  ||||| ||||| |  || || ||||||||||| |    
T  32049698 tgatgataaaatggcgggaagaaaggatgctgagaatacggcatatatgggtatggcggaggcatttgagctgcattgatgggagcaacagtagccattg 32049599  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| || ||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | ||    
T  32049598 attgaccggctccagctgacaccatccccacttccgtttcttttttcttgtggtgtccattaccatacctcttcgaggcactcgtagaagattcagcttt 32049499  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  32049498 ctcaaacacaatgat 32049484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 179
Target Start/End: Complemental strand, 37925393 - 37925218
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  37925393 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccattg 37925294  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||    
T  37925293 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcga 37925218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 16829679 - 16829893
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||| ||   ||| | |||||  ||||| |  ||||  ||||| |  || || || |||||||| |    
T  16829679 tgatgataaaacggtgggaagaacggatgctgagaatatggcatatatgggtatgacggaggcatttgagttgcattgatgggagcaacggtagccatgg 16829778  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | ||    
T  16829779 attgaccggctccagctgacaccatccccacttcagtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagcttt 16829878  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  16829879 ctcaaacacaatgat 16829893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 218
Target Start/End: Complemental strand, 16891802 - 16891588
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||| ||   ||| | |||||  ||||| |  ||||  ||||| |  || || || |||||||| |    
T  16891802 tgatgataaaacggtgggaagaacggatgctgagaatatggcatatatgggtatgacggaggcatttgagttgcattgatgggagcaacggtagccatgg 16891703  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  |||| |||||||| ||| | ||    
T  16891702 attgaccggctccagctgacaccatccccacttcagtttctttcttcttgtggtgtccattaccatacctcttcgatgcactcgtagaagattcagcttt 16891603  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  16891602 ctcaaacacaatgat 16891588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 180
Target Start/End: Original strand, 19416840 - 19417016
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  19416840 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagccgcattgataggagcaacagtagccattg 19416939  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 180  Q
    |  | || |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  19416940 attgcccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 19417016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 180
Target Start/End: Complemental strand, 40233399 - 40233223
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||||||||||||||||||||| ||||||||||| |||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || || |||||||| |    
T  40233399 tgatggtaaaacggtgggaagaacggatgctgagagtacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacggtagccattg 40233300  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 180  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  40233299 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 40233223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 179
Target Start/End: Original strand, 261106 - 261281
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||    || | |||||  ||||| |  ||||  ||||| | ||| || ||||||||||| |    
T  261106 tgatgataaaacggtgggaagaaaggatgctgagaatacggcatgtatgggtatgacggaggcatttgagttgcattgataggagcaacagtagccattg 261205  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  261206 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 261281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 9350335 - 9350375
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacgg 44  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  9350335 tgatggtaaaacggtgggaagaaaggatgctgagaatacgg 9350375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 12586701 - 12586661
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacgg 44  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  12586701 tgatggtaaaacggtgggaagaaaggatgctgagaatacgg 12586661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 180
Target Start/End: Original strand, 13936885 - 13937061
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||||||||| || || ||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  13936885 tgatggtaaaatggcggaaagaaaggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccatgg 13936984  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 180  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  13936985 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 13937061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 27777107 - 27777067
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacgg 44  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  27777107 tgatggtaaaacggtgggaagaaaggatgctgagaatacgg 27777067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 27803592 - 27803552
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacgg 44  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  27803592 tgatggtaaaacggtgggaagaaaggatgctgagaatacgg 27803552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 27816874 - 27816834
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacgg 44  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  27816874 tgatggtaaaacggtgggaagaaaggatgctgagaatacgg 27816834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 180
Target Start/End: Complemental strand, 34279349 - 34279173
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||||||||| || || ||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  34279349 tgatggtaaaatggcggaaagaaaggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccatgg 34279250  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 180  Q
    |  |||| ||||  |  || ||||| || || || ||||| |||||||||||||| ||||| |||||||||||||||    
T  34279249 attgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgac 34279173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 179
Target Start/End: Complemental strand, 37375061 - 37374886
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| |||||||| |||||||| ||||||||||| |||||  |||| | |||||  ||||| |  ||||  || || | ||| || ||||||||||| |    
T  37375061 tgatgataaaacggcgggaagaacggatgctgagagtacggcacatatgggtatgacggaggcatttgagttgcgttgataggagcaacagtagccattg 37374962  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  37374961 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 37374886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 11635530 - 11635744
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||| || |||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || || |||||||| |    
T  11635530 tgatgataaaatggcgggaagaaaggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacggtagccatgg 11635629  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| ||||  |  || ||||| || || || | ||| |||||||||||||| ||||| |||||||||||| || |||| | |||||| ||| | ||    
T  11635630 attgaccggctcctgctgacaccatccccacttccgcttctttcttcttgtggtgtccattaccatacctcttcaacgcactcgcagaagattcagcttt 11635729  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  11635730 ctcaaacacaatgat 11635744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 11641719 - 11641933
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||| || |||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || || |||||||| |    
T  11641719 tgatgataaaatggcgggaagaaaggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacggtagccatgg 11641818  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| ||||  |  || ||||| || || || | ||| |||||||||||||| ||||| |||||||||||| || |||| | |||||| ||| | ||    
T  11641819 attgaccggctcctgctgacaccatccccacttccgcttctttcttcttgtggtgtccattaccatacctcttcaacgcactcgcagaagattcagcttt 11641918  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  11641919 ctcaaacacaatgat 11641933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 176
Target Start/End: Original strand, 23128907 - 23129079
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||| || || ||||| ||||||||||||||||| ||||| | |||||  ||||| |  || || ||||| | ||| || ||||||||||| |    
T  23128907 tgatgataaaatggcggaaagaaaggatgctgagaatacggcgcatatgggtatgacggaggcatttgggctgcattgataggagcaacagtagccatgg 23129006  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 176  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| || || |||||||||||    
T  23129007 attgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccgttaccatacctctt 23129079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 180
Target Start/End: Original strand, 39052169 - 39052345
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||||||||||||||||||||| ||||||||||| |||||   ||| | |||||  ||||| |  ||||| |||||   ||| || || || || || |    
T  39052169 tgatggtaaaacggtgggaagaacggatgctgagagtacggcatatatgggtatgacggaggcatttgagctgcattggtaggagcaacggttgctattg 39052268  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 180  Q
    |  |||| |||| ||  || |||||||| || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  39052269 attgaccggctccagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 39052345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 12655322 - 12655270
Alignment:
Q  124 accattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 176  Q
    |||||||| || || ||||| |||||||||||||| ||||| |||||||||||    
T  12655322 accattcctacttccgtttctttcttcttgtggtgtccattaccatacctctt 12655270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 20837698 - 20837646
Alignment:
Q  124 accattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 176  Q
    |||||||| || || ||||| |||||||||||||| ||||| |||||||||||    
T  20837698 accattcctacttccgtttctttcttcttgtggtgtccattaccatacctctt 20837646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 21703514 - 21703650
Alignment:
Q  16 ggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatagaccgacctgctc 115  Q
    ||||| ||||| ||||||||||| || || ||||| | ||| |  ||||||| ||  |||||||||| |||||| ||||||||||| ||  |||| ||||    
T  21703514 ggtggaaagaagggatgctgagagtatggcgcatatgggtacgacggaggtaactaggcagcattaataggggcaacagtagccatggattgaccggctc 21703613  T
Q  116 tagaggataccattccaacctctgtttccttcttctt 152  Q
      |  |||||||| || || |||||||| ||||||||    
T  21703614 cggcagataccatccctacttctgtttctttcttctt 21703650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 176
Target Start/End: Original strand, 27434797 - 27434957
Alignment:
Q  16 ggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatagaccgacctgctc 115  Q
    ||||| ||||| ||||||||||| ||||| ||||| | ||| |  ||||| |  || |||||||||| ||| || ||||||||||| ||  |||| ||||    
T  27434797 ggtggaaagaaaggatgctgagagtacggcgcatatgggtacgacggaggcatttgggcagcattaataggagcaacagtagccatggattgaccggctc 27434896  T
Q  116 tagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 176  Q
      |  || ||||| || || || ||||| |||||||||||||| || || |||||||||||    
T  27434897 cggcagacaccatccctacttccgtttctttcttcttgtggtgtccgttaccatacctctt 27434957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 4e-22; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 12093044 - 12093269
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || | |||||||||||    
T  12093044 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcacttgagctgcattgataggagcaatagtagccatag 12093143  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  | || |||  ||  || |||||||| || || ||||| |||||||||||||| ||||| ||||| ||||||||  |||| |||||||| ||| | ||    
T  12093144 attggccggctgcagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgatgcactcgtagaagattcagcttt 12093243  T
Q  204 ctcaaatacaatgataccctctctga 229  Q
    |||||| |||||||| || |||||||    
T  12093244 ctcaaacacaatgatcccatctctga 12093269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 19208671 - 19208885
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  19208671 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccattg 19208770  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| || ||| |||||||  |||| |||||||| ||| | ||    
T  19208771 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccgtacttcttcgatgcactcgtagaagattcagcttt 19208870  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  19208871 ctcaaacacaatgat 19208885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 218
Target Start/End: Complemental strand, 19286369 - 19286155
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| ||||||||||| |||||  |||| | |||||  ||||| |  ||||| ||||| | ||| || ||||| ||||| |    
T  19286369 tgatgataaaacggtgggaagaacggatgctgagagtacggcacatatgggtatgacggaggcatttgagctgcattgataggagcaacagtggccatgg 19286270  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| ||||  |  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||| |||| | |||||| ||| | ||    
T  19286269 attgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgacgcactcgcagaagattcagcttt 19286170  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  19286169 ctcaaacacaatgat 19286155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 179
Target Start/End: Complemental strand, 18710490 - 18710315
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| ||||||||||| |||||  |||| | |||||  ||||| |  ||||| ||||| | ||| || || |||||||| |    
T  18710490 tgatgataaaacggtgggaagaacggatgctgagagtacggcacatatgggtatgacggaggcatttgagctgcattgataggagcaacggtagccattg 18710391  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  || |||||||| || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  18710390 attgaccggctccagctgacaccattcccacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 18710315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 218
Target Start/End: Complemental strand, 31354428 - 31354214
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  || || ||||| | ||| || || || ||||| |    
T  31354428 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgggctgcattgataggagcaacggtggccatgg 31354329  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||  | || |||||||| ||| | ||    
T  31354328 attgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcgatgcgctcgtagaagattcagcttt 31354229  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  31354228 ctcaaacacaatgat 31354214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 180
Target Start/End: Original strand, 31490061 - 31490237
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||| ||   ||| | |||||  ||||| |  ||||| ||||| | |||||| ||||||||||| |    
T  31490061 tgatgataaaacggtgggaagaacggatgctgagaatatggcatatatgggtatgacggaggcatttgagctgcattgataggggcaacagtagccattg 31490160  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 180  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  31490161 attgaccggctccagctgacaccatccccacttcagtttctttcttcttgtggtgtccattaccatatctcttcgac 31490237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 229
Target Start/End: Complemental strand, 29829217 - 29828992
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || || |||||||| |    
T  29829217 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacggtagccattg 29829118  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||| || |   ||| || ||| | ||    
T  29829117 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgacgcattcacagaggattcagcttt 29829018  T
Q  204 ctcaaatacaatgataccctctctga 229  Q
    |||||| |||||||| || |||||||    
T  29829017 ctcaaacacaatgattccatctctga 29828992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 180
Target Start/End: Original strand, 3329830 - 3330006
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| |||||||||||||||||||||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||  ||||||| |    
T  3329830 tgatgataaaacggtgggaagaatggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacgatagccatgg 3329929  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 180  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  3329930 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgac 3330006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 180
Target Start/End: Complemental strand, 33258627 - 33258451
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  33258627 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccattg 33258528  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgac 180  Q
    |  | || |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| |||||||||    
T  33258527 attgcccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgcccattaccatatctcttcgac 33258451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 179
Target Start/End: Original strand, 28362266 - 28362441
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| |  || || || |||||||| |    
T  28362266 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgatgggagcaacggtagccatgg 28362365  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||    
T  28362366 attgaccggctccagctgataccatccccacttcagtttctttcttcttgtggtgtccattaccatatctcttcga 28362441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 176
Target Start/End: Complemental strand, 14557531 - 14557359
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||| || || ||||| |||||||||||||||||  |||| | |||||  ||||| |  || || ||||| | ||| |||||||||||||| |    
T  14557531 tgatgataaaatggcggaaagaagggatgctgagaatacggcacatatgggtatgacggaggcatttgggctgcattgataggagcgacagtagccatgg 14557432  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 176  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| |||||||||||    
T  14557431 attgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctctt 14557359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 176
Target Start/End: Complemental strand, 16277458 - 16277286
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||| || || ||||| ||||||||||||||||| ||||| | |||||  ||||| |  || || ||||| | ||| || ||||||||||| |    
T  16277458 tgatgataaaatggcggaaagaaaggatgctgagaatacggcgcatatgggtatgacggaggcatttgggctgcattgataggagcaacagtagccatgg 16277359  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 176  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| |||||||||||    
T  16277358 attgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctctt 16277286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 2137588 - 2137742
Alignment:
Q  22 aagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatagaccgacctgctctagagg 121  Q
    ||||| ||||||||||||||||| ||||| | |||||  ||||| |  || || ||||| | ||| || ||||||||||| ||  |||| |||| ||  |    
T  2137588 aagaaaggatgctgagaatacggcgcatatgggtatgacggaggcatttgggctgcattgataggagcaacagtagccatggattgaccggctccagctg 2137687  T
Q  122 ataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 176  Q
    | ||||| || || || ||||| |||||||||||||| ||||| |||||||||||    
T  2137688 acaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctctt 2137742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 19674345 - 19674131
Alignment:
Q  1 tattgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagcca 100  Q
    |||||||| ||||| || || ||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || || |||||||    
T  19674345 tattgatgataaaatggcggaaagaaaggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacggtagcca 19674246  T
Q  101 tagaccgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcacc 200  Q
    | ||  |||  |||| ||  || ||||| || || || ||||| ||||||||||| || ||||| ||||||||||||||| |||| | |||||| ||| |    
T  19674245 tggattgactggctccagctgacaccatccccacgtccgtttctttcttcttgtgatgtccattaccatacctcttcgacgcactcgcagaagattcagc 19674146  T
Q  201 cttctcaaatacaat 215  Q
     ||||| || |||||    
T  19674145 tttctcgaacacaat 19674131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 19687984 - 19687830
Alignment:
Q  22 aagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatagaccgacctgctctagagg 121  Q
    ||||| |||||||| |||||||| ||||| | |||||  ||||| |  || |||||||| | ||| || ||||||||||| ||  |||| ||||  |  |    
T  19687984 aagaaaggatgctgggaatacggcgcatatgggtatgacggaggcatttgggcagcattgataggagcaacagtagccatggattgaccggctccggctg 19687885  T
Q  122 ataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 176  Q
    | ||||| || || || ||||| |||||||||||||| ||||| |||||||||||    
T  19687884 acaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctctt 19687830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 179
Target Start/End: Complemental strand, 8136 - 7961
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || |||||||||| ||    
T  8136 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccacag 8037  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  8036 attgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 7961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 15282 - 15496
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||| ||   ||| | |||||  ||||| |  ||||| ||||| |  || || ||||||||||| |    
T  15282 tgatgataaaacggtgggaagaacggatgctgagaatatggcatatatgggtatgacggaggcatttgagctgcattgatgggagcaacagtagccattg 15381  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  |||||||| || || || ||||| |||||||||||||| ||||| || ||||| |||||  |||| |||||||| ||| | ||    
T  15382 attgaccggctccagctgataccatccccacttccgtttctttcttcttgtggtgtccattaccgtaccttttcgatgcactcgtagaagattcagcttt 15481  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  15482 ctcaaacacaatgat 15496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 26554 - 26768
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  26554 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccattg 26653  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtagaagactcaccctt 203  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||||||| || ||  ||| || ||| | ||    
T  26654 attgaccggctccagctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctcttcgacgcatttacagaggattcagcttt 26753  T
Q  204 ctcaaatacaatgat 218  Q
    |||||| ||||||||    
T  26754 ctcaaacacaatgat 26768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 179
Target Start/End: Original strand, 482 - 657
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||| || || ||||| |||||||||||||||||  |||| | |||||  ||||| |  ||||| ||||| | ||| || ||||||||||| |    
T  482 tgatgataaaatggcggaaagaaaggatgctgagaatacggcacatatgggtatgacggaggcatttgagctgcattgataggagcaacagtagccatgg 581  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcga 179  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| ||||||||||||||    
T  582 attgaccggctccagttgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctcttcga 657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 190
Target Start/End: Original strand, 9418 - 9604
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||||||||||||||| |||||||||||||||||   ||| | |||||  ||||| |  ||||| ||||| | ||| ||||| |||||||| |    
T  9418 tgatgataaaacggtgggaagaacggatgctgagaatacggcatatatgggtatgacggaggcatttgagctgcattgataggagcgacggtagccatgg 9517  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctcttcgacccacttgtag 190  Q
    |  |||| ||||  |  || ||||| || || || ||||| |||||||||||||| ||||| ||||| ||||| ||| |||| ||||    
T  9518 attgaccggctcccgctgacaccatccccacttccgtttctttcttcttgtggtgtccattaccatatctctttgacgcactcgtag 9604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 19919 - 19879
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacgg 44  Q
    ||||| ||||||||||||||||| |||||||||||||||||    
T  19919 tgatgataaaacggtgggaagaacggatgctgagaatacgg 19879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 176
Target Start/End: Complemental strand, 27196 - 27024
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatag 103  Q
    ||||| ||||| || || ||||| ||||||||||||||||| ||||| | |||||  ||||| |  || || ||||| | ||| || ||||||||||| |    
T  27196 tgatgataaaatggcggaaagaaaggatgctgagaatacggcgcatatgggtatgacggaggcatttgggctgcattgataggagcaacagtagccatgg 27097  T
Q  104 accgacctgctctagaggataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 176  Q
    |  |||| |||| ||  || ||||| || || || ||||| |||||||||||||| ||||| |||||||||||    
T  27096 attgaccggctccagctgacaccatccctacttccgtttctttcttcttgtggtgtccattaccatacctctt 27024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 29649 - 29495
Alignment:
Q  22 aagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatagaccgacctgctctagagg 121  Q
    ||||| ||||||||||||||||| ||||| | ||| | |||||| |  || |||||||||| ||| || ||||||||||| ||  |||| ||||  |  |    
T  29649 aagaaaggatgctgagaatacggcgcatacgggtacgatggaggcatttgggcagcattaataggagcaacagtagccatggattgaccggctccggcag 29550  T
Q  122 ataccattccaacctctgtttccttcttcttgtggtggccattgccatacctctt 176  Q
    | ||||| || || || ||||| |||||||||||||| || || |||||||||||    
T  29549 acaccatccctacttccgtttctttcttcttgtggtgtccgttaccatacctctt 29495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0496 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0496
Description:

Target: scaffold0496; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 85 - 125
Alignment:
Q  4 tgatggtaaaacggtgggaagaatggatgctgagaatacgg 44  Q
    ||||| ||||||||||||||||| |||||||||||||||||    
T  85 tgatgataaaacggtgggaagaacggatgctgagaatacgg 125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 152
Target Start/End: Complemental strand, 20298 - 20168
Alignment:
Q  22 aagaatggatgctgagaatacggtgcataggagtatggtggaggtagctgagcagcattaacaggggcgacagtagccatagaccgacctgctctagagg 121  Q
    ||||| ||||||||||| || || ||||| | ||| |  ||||||| ||| |||||||||| |||||| ||||||||||| ||  |||| ||||  |  |    
T  20298 aagaagggatgctgagagtatggcgcatatgggtacgacggaggtaactgggcagcattaataggggcaacagtagccatggattgaccggctccggcag 20199  T
Q  122 ataccattccaacctctgtttccttcttctt 152  Q
    ||||||| || || |||||||| ||||||||    
T  20198 ataccatccctacttctgtttctttcttctt 20168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 44
Target Start/End: Complemental strand, 5886 - 5853
Alignment:
Q  11 aaaacggtgggaagaatggatgctgagaatacgg 44  Q
    |||||||||||||||| |||||||||||||||||    
T  5886 aaaacggtgggaagaaaggatgctgagaatacgg 5853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University