View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11737A_low_336 (Length: 250)

Name: NF11737A_low_336
Description: NF11737A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11737A_low_336
NF11737A_low_336
[»] chr3 (37 HSPs)
chr3 (137-241)||(34420717-34420816)
chr3 (137-240)||(26573113-26573211)
chr3 (137-241)||(45620901-45621001)
chr3 (137-205)||(54374419-54374487)
chr3 (139-205)||(516425-516491)
chr3 (140-205)||(54032635-54032700)
chr3 (137-205)||(8247762-8247830)
chr3 (137-205)||(9607219-9607287)
chr3 (137-205)||(13628865-13628933)
chr3 (137-205)||(29366795-29366863)
chr3 (137-205)||(40272885-40272953)
chr3 (137-205)||(46421110-46421178)
chr3 (140-198)||(45948914-45948972)
chr3 (136-205)||(10870024-10870092)
chr3 (140-205)||(53996642-53996707)
chr3 (141-205)||(13730681-13730745)
chr3 (163-205)||(5173819-5173861)
chr3 (144-205)||(30928227-30928288)
chr3 (140-205)||(45139554-45139619)
chr3 (141-201)||(26782386-26782446)
chr3 (137-203)||(1217108-1217172)
chr3 (139-206)||(12525422-12525489)
chr3 (137-240)||(22609752-22609849)
chr3 (172-241)||(25944454-25944518)
chr3 (137-205)||(4495737-4495805)
chr3 (137-193)||(10795498-10795554)
chr3 (137-205)||(12914108-12914176)
chr3 (137-189)||(14986989-14987041)
chr3 (137-205)||(26869723-26869790)
chr3 (137-205)||(39212006-39212074)
chr3 (137-205)||(16735457-16735524)
chr3 (163-205)||(39203532-39203574)
chr3 (163-205)||(52926309-52926351)
chr3 (137-205)||(7696960-7697026)
chr3 (137-205)||(22122990-22123056)
chr3 (31-95)||(7198788-7198852)
chr3 (141-205)||(33926099-33926162)
[»] chr7 (41 HSPs)
chr7 (138-241)||(29907380-29907480)
chr7 (137-198)||(46354195-46354256)
chr7 (141-205)||(7193079-7193143)
chr7 (137-205)||(11617661-11617729)
chr7 (137-205)||(19426962-19427030)
chr7 (137-205)||(47716453-47716521)
chr7 (137-200)||(2541092-2541155)
chr7 (136-205)||(27629628-27629697)
chr7 (145-205)||(7644950-7645010)
chr7 (137-201)||(16341276-16341340)
chr7 (137-241)||(28362218-28362317)
chr7 (141-205)||(42805518-42805582)
chr7 (137-205)||(43557466-43557534)
chr7 (137-200)||(18512526-18512588)
chr7 (163-240)||(42495934-42496007)
chr7 (137-198)||(7879639-7879700)
chr7 (137-205)||(10693146-10693212)
chr7 (137-238)||(19265781-19265876)
chr7 (137-241)||(19266413-19266512)
chr7 (137-205)||(32233208-32233275)
chr7 (137-205)||(33871983-33872050)
chr7 (137-203)||(21172082-21172146)
chr7 (137-208)||(35203430-35203501)
chr7 (163-204)||(6736885-6736926)
chr7 (137-202)||(12473301-12473366)
chr7 (137-205)||(42391173-42391239)
chr7 (137-205)||(40463871-40463938)
chr7 (137-241)||(42101958-42102057)
chr7 (137-205)||(42798663-42798731)
chr7 (154-241)||(3469269-3469351)
chr7 (163-202)||(31591206-31591245)
chr7 (146-205)||(38262278-38262337)
chr7 (146-241)||(48123566-48123656)
chr7 (163-205)||(48735219-48735262)
chr7 (171-205)||(28078238-28078272)
chr7 (163-205)||(32758255-32758297)
chr7 (171-205)||(47077960-47077994)
chr7 (164-205)||(7794606-7794647)
chr7 (137-205)||(18747480-18747549)
chr7 (213-242)||(36267903-36267932)
chr7 (137-205)||(22699043-22699111)
[»] chr5 (27 HSPs)
chr5 (139-240)||(23974744-23974840)
chr5 (137-205)||(38879575-38879643)
chr5 (137-205)||(24448884-24448952)
chr5 (137-205)||(4619179-4619247)
chr5 (137-205)||(27328746-27328814)
chr5 (137-241)||(39301086-39301185)
chr5 (142-241)||(10634224-10634318)
chr5 (141-204)||(22025538-22025601)
chr5 (138-203)||(35710309-35710372)
chr5 (137-205)||(32703418-32703484)
chr5 (137-205)||(37024629-37024695)
chr5 (137-205)||(43334196-43334265)
chr5 (137-205)||(41014313-41014380)
chr5 (137-205)||(42924907-42924975)
chr5 (154-205)||(1565425-1565476)
chr5 (154-209)||(34074652-34074707)
chr5 (145-198)||(1405188-1405241)
chr5 (137-202)||(28516507-28516572)
chr5 (142-205)||(12006408-12006471)
chr5 (137-241)||(19143016-19143114)
chr5 (137-196)||(43574609-43574668)
chr5 (163-205)||(1850634-1850676)
chr5 (163-205)||(22907963-22908005)
chr5 (137-205)||(8170057-8170123)
chr5 (137-190)||(13801842-13801895)
chr5 (180-241)||(39079882-39079938)
chr5 (137-205)||(22187279-22187347)
[»] chr8 (34 HSPs)
chr8 (141-241)||(44781583-44781678)
chr8 (142-233)||(22598128-22598214)
chr8 (137-241)||(42083772-42083871)
chr8 (137-205)||(28817699-28817767)
chr8 (137-205)||(29521758-29521826)
chr8 (137-205)||(36720790-36720858)
chr8 (137-240)||(39461069-39461168)
chr8 (137-202)||(35105920-35105985)
chr8 (137-198)||(44530150-44530211)
chr8 (137-205)||(7136602-7136670)
chr8 (137-205)||(13160696-13160763)
chr8 (137-239)||(6760786-6760884)
chr8 (137-205)||(20284144-20284214)
chr8 (138-241)||(30962847-30962945)
chr8 (137-198)||(8897837-8897898)
chr8 (137-205)||(12670323-12670389)
chr8 (137-205)||(21070772-21070843)
chr8 (137-205)||(8484011-8484079)
chr8 (137-205)||(18164833-18164900)
chr8 (139-205)||(24365134-24365201)
chr8 (163-205)||(20869595-20869637)
chr8 (137-198)||(26954133-26954195)
chr8 (163-205)||(30454194-30454236)
chr8 (136-205)||(17823570-17823639)
chr8 (122-242)||(28407377-28407491)
chr8 (137-202)||(31457170-31457234)
chr8 (141-193)||(5135366-5135418)
chr8 (137-241)||(14018042-14018141)
chr8 (137-205)||(25250516-25250584)
chr8 (137-205)||(35261673-35261741)
chr8 (154-205)||(2626513-2626564)
chr8 (137-200)||(389642-389707)
chr8 (172-205)||(24245445-24245478)
chr8 (137-198)||(45071266-45071326)
[»] chr1 (46 HSPs)
chr1 (137-241)||(2435860-2435959)
chr1 (137-241)||(17470419-17470518)
chr1 (141-239)||(18724622-18724715)
chr1 (141-241)||(22327085-22327180)
chr1 (152-241)||(2435981-2436065)
chr1 (137-240)||(10668206-10668310)
chr1 (137-205)||(11596530-11596597)
chr1 (137-240)||(32632630-32632728)
chr1 (141-205)||(46991821-46991885)
chr1 (139-205)||(6925117-6925183)
chr1 (163-241)||(35019216-35019289)
chr1 (137-198)||(30395801-30395862)
chr1 (137-205)||(38478355-38478421)
chr1 (137-205)||(18944660-18944728)
chr1 (154-241)||(23371110-23371192)
chr1 (141-231)||(35117845-35117930)
chr1 (137-205)||(34725171-34725237)
chr1 (140-205)||(35005140-35005205)
chr1 (137-205)||(20004165-20004233)
chr1 (163-239)||(20036208-20036279)
chr1 (137-205)||(23768393-23768461)
chr1 (137-201)||(25468336-25468400)
chr1 (137-205)||(27201664-27201732)
chr1 (137-205)||(31272448-31272515)
chr1 (137-205)||(41319879-41319947)
chr1 (137-205)||(46248026-46248094)
chr1 (166-241)||(6983911-6983981)
chr1 (138-205)||(9939478-9939545)
chr1 (164-206)||(19414455-19414497)
chr1 (137-205)||(35253260-35253326)
chr1 (137-241)||(50811925-50812025)
chr1 (173-241)||(10378834-10378897)
chr1 (137-205)||(14617055-14617123)
chr1 (137-241)||(44485182-44485281)
chr1 (137-205)||(50760299-50760367)
chr1 (163-241)||(25554821-25554894)
chr1 (171-205)||(47214528-47214562)
chr1 (137-238)||(34679292-34679388)
chr1 (212-241)||(43207475-43207504)
chr1 (137-189)||(4251455-4251507)
chr1 (137-205)||(8197060-8197128)
chr1 (137-201)||(24564365-24564429)
chr1 (213-241)||(31442521-31442549)
chr1 (137-205)||(39215032-39215100)
chr1 (171-203)||(43768177-43768209)
chr1 (141-201)||(45264477-45264537)
[»] chr2 (38 HSPs)
chr2 (137-241)||(99338-99435)
chr2 (145-232)||(29419970-29420052)
chr2 (137-231)||(33795258-33795347)
chr2 (137-205)||(17896253-17896322)
chr2 (137-205)||(5841022-5841090)
chr2 (137-205)||(10543692-10543760)
chr2 (137-205)||(14530312-14530380)
chr2 (137-205)||(19614986-19615054)
chr2 (137-205)||(24200698-24200766)
chr2 (137-204)||(17623559-17623626)
chr2 (137-205)||(10546156-10546225)
chr2 (137-241)||(4516424-4516523)
chr2 (137-205)||(8455389-8455457)
chr2 (137-205)||(12023992-12024059)
chr2 (137-205)||(17667996-17668064)
chr2 (141-239)||(21377150-21377243)
chr2 (137-209)||(2003609-2003682)
chr2 (137-205)||(5450279-5450348)
chr2 (141-205)||(40416948-40417012)
chr2 (154-205)||(25079808-25079859)
chr2 (137-205)||(23397760-23397826)
chr2 (137-202)||(32781361-32781426)
chr2 (140-241)||(44521449-44521545)
chr2 (137-205)||(7214528-7214596)
chr2 (137-205)||(11514430-11514498)
chr2 (141-205)||(14444723-14444786)
chr2 (137-205)||(19977787-19977855)
chr2 (137-205)||(23145771-23145839)
chr2 (137-205)||(23557561-23557629)
chr2 (163-205)||(17380335-17380377)
chr2 (163-205)||(21779358-21779400)
chr2 (171-205)||(25641496-25641530)
chr2 (137-203)||(44449457-44449522)
chr2 (163-205)||(44604848-44604890)
chr2 (137-242)||(44643484-44643585)
chr2 (145-205)||(31158522-31158582)
chr2 (213-241)||(35017780-35017808)
chr2 (142-205)||(45235895-45235959)
[»] chr4 (49 HSPs)
chr4 (137-205)||(19027842-19027910)
chr4 (137-200)||(47443956-47444019)
chr4 (172-241)||(50856344-50856408)
chr4 (137-205)||(21646958-21647026)
chr4 (140-205)||(14590831-14590897)
chr4 (137-241)||(487208-487307)
chr4 (137-205)||(16408676-16408744)
chr4 (137-205)||(16911556-16911624)
chr4 (137-205)||(17043467-17043535)
chr4 (137-205)||(25463116-25463184)
chr4 (144-204)||(37494846-37494906)
chr4 (137-205)||(41018867-41018934)
chr4 (139-238)||(42164224-42164317)
chr4 (137-199)||(54730249-54730312)
chr4 (163-241)||(41549345-41549418)
chr4 (144-205)||(7385556-7385617)
chr4 (137-205)||(20224978-20225044)
chr4 (140-205)||(43035242-43035307)
chr4 (141-238)||(47441607-47441699)
chr4 (137-205)||(48598898-48598964)
chr4 (137-205)||(5648253-5648320)
chr4 (137-205)||(6430699-6430766)
chr4 (137-205)||(23580281-23580349)
chr4 (144-240)||(54966985-54967076)
chr4 (154-241)||(30581557-30581639)
chr4 (154-241)||(54640429-54640511)
chr4 (163-205)||(5306762-5306804)
chr4 (171-241)||(12257700-12257765)
chr4 (163-205)||(17315397-17315439)
chr4 (137-239)||(25343152-25343249)
chr4 (137-205)||(9832386-9832452)
chr4 (140-205)||(10660398-10660463)
chr4 (140-205)||(10874543-10874608)
chr4 (152-205)||(30690271-30690324)
chr4 (137-205)||(47528603-47528669)
chr4 (145-205)||(7038047-7038106)
chr4 (137-205)||(30639374-30639441)
chr4 (141-241)||(36589707-36589801)
chr4 (137-205)||(44363205-44363273)
chr4 (140-187)||(9987910-9987957)
chr4 (163-237)||(49938689-49938759)
chr4 (163-205)||(10380041-10380083)
chr4 (144-198)||(14983835-14983889)
chr4 (163-205)||(32629367-32629409)
chr4 (141-203)||(35567166-35567228)
chr4 (163-201)||(39077893-39077931)
chr4 (145-203)||(44357216-44357274)
chr4 (137-205)||(29207971-29208037)
chr4 (137-198)||(40915830-40915890)
[»] scaffold0049 (1 HSPs)
scaffold0049 (137-205)||(58971-59039)
[»] chr6 (23 HSPs)
chr6 (137-205)||(12221990-12222058)
chr6 (140-240)||(13905055-13905150)
chr6 (137-205)||(29355930-29355998)
chr6 (137-205)||(2166485-2166553)
chr6 (137-205)||(2178118-2178186)
chr6 (137-205)||(8409237-8409305)
chr6 (144-205)||(17432334-17432395)
chr6 (137-205)||(7947445-7947513)
chr6 (154-204)||(12063462-12063512)
chr6 (137-205)||(1346958-1347024)
chr6 (137-205)||(1354830-1354896)
chr6 (137-194)||(33138838-33138895)
chr6 (137-205)||(4136590-4136658)
chr6 (137-205)||(9161117-9161184)
chr6 (137-205)||(20400661-20400729)
chr6 (140-203)||(24097577-24097640)
chr6 (141-199)||(14553511-14553569)
chr6 (163-204)||(3116222-3116263)
chr6 (137-198)||(6024234-6024295)
chr6 (140-241)||(12889389-12889485)
chr6 (137-205)||(1941849-1941917)
chr6 (137-205)||(3815150-3815218)
chr6 (137-201)||(17448322-17448386)
[»] scaffold0005 (1 HSPs)
scaffold0005 (140-205)||(226481-226547)
[»] scaffold0057 (2 HSPs)
scaffold0057 (137-198)||(46832-46893)
scaffold0057 (137-205)||(24845-24908)
[»] scaffold0254 (1 HSPs)
scaffold0254 (137-205)||(4151-4219)
[»] scaffold0258 (1 HSPs)
scaffold0258 (137-205)||(13097-13164)
[»] scaffold0223 (1 HSPs)
scaffold0223 (163-205)||(11125-11167)
[»] scaffold0187 (2 HSPs)
scaffold0187 (163-205)||(10147-10189)
scaffold0187 (163-205)||(20475-20517)
[»] scaffold0167 (1 HSPs)
scaffold0167 (137-205)||(23593-23661)
[»] scaffold0311 (1 HSPs)
scaffold0311 (138-205)||(10804-10871)
[»] scaffold1176 (1 HSPs)
scaffold1176 (163-205)||(1684-1726)
[»] scaffold0168 (1 HSPs)
scaffold0168 (163-205)||(30573-30615)
[»] scaffold0018 (1 HSPs)
scaffold0018 (140-195)||(72943-72999)


Alignment Details
Target: chr3 (Bit Score: 57; Significance: 7e-24; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 137 - 241
Target Start/End: Original strand, 34420717 - 34420816
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgcc 236  Q
    |||||||||||||||| |||||||  ||||||| |||||| ||||||||||||||||||||||||||||      |||||||||||||||| ||||||||    
T  34420717 tacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtca-----cgtgacaacaactttactgttgcgcc 34420811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 137 - 240
Target Start/End: Complemental strand, 26573211 - 26573113
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgcc 236  Q
    |||||||||||||||| |||||||  || |||| |||||| ||||||||||||||||||||||||||||      |||||||||||||||||||||||||    
T  26573211 tacgcagccttaccctgttttttacacaggaggctgtttccaggacttgaacccgtgacctttcagtca-----cgtgacaacaactttaccgttgcgcc 26573117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 137 - 241
Target Start/End: Original strand, 45620901 - 45621001
Alignment:
Q  137 tacgcagccttaccctatttttt-aggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgc 235  Q
    |||||||||||||||| |||||| |  ||||||| |||||| || |||||||||||||||||||||||||      ||||||||||||||||||||||||    
T  45620901 tacgcagccttaccctgtttttttacacaagaggctgtttccagaacttgaacccgtgacctttcagtca-----cgtgacaacaactttaccgttgcgc 45620995  T
Q  236 caaggc 241  Q
    ||||||    
T  45620996 caaggc 45621001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 54374419 - 54374487
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||||||||||||||||||||  |||||||||||||| | |||||||||| |||||||||||||||    
T  54374419 tacgcagccttaccctattttttacacaagaggttgtttccaagacttgaacctgtgacctttcagtca 54374487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 516491 - 516425
Alignment:
Q  139 cgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||| |||||||  ||||||| |||||| ||||||||||||||||||||||||||||    
T  516491 cgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtca 516425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 205
Target Start/End: Original strand, 54032635 - 54032700
Alignment:
Q  140 gcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||||||||| |||||||  |||||||||||||| ||||||||||||||||||||| ||||||    
T  54032635 gcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgaccttccagtca 54032700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 8247762 - 8247830
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||| ||||||||| |||||||  ||||||| |||||| ||||||||||||||||||||||||||||    
T  8247762 tacgcaaccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtca 8247830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 9607287 - 9607219
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| ||||||| |||||||| |||||| ||||||||||||  ||||||||||||||    
T  9607287 tacgcagccttaccctgttttttacgcaagaggctgtttccaggacttgaaccgatgacctttcagtca 9607219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 13628865 - 13628933
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| ||| |||  ||||||| |||||| ||||||||||||||||||||||||||||    
T  13628865 tacgcagccttaccctgtttcttacacaagaggctgtttccaggacttgaacccgtgacctttcagtca 13628933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 29366795 - 29366863
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| |||||||  ||||||| |||||| |||||||||||||||||||||| |||||    
T  29366795 tacgcagccttaccctgttttttatacaagaggctgtttccaggacttgaacccgtgaccttttagtca 29366863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 40272885 - 40272953
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| |||||||  |||||||||||||| ||||||||||||| ||||||| ||||||    
T  40272885 tacgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccatgaccttccagtca 40272953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 46421110 - 46421178
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| |||||||  ||||||| |||||| |||||||||||||||||||||| |||||    
T  46421110 tacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttaagtca 46421178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 45948914 - 45948972
Alignment:
Q  140 gcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctt 198  Q
    |||||||||||||||||||||  |||||||||||||| |||| ||||||||||||||||    
T  45948914 gcagccttaccctattttttacacaagaggttgtttccaggaattgaacccgtgacctt 45948972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 136 - 205
Target Start/End: Original strand, 10870024 - 10870092
Alignment:
Q  136 ttacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||||||||||||| ||||| |  ||||||| |||||| ||||||||||||||||||||||||||||    
T  10870024 ttacgcagccttaccctgttttt-acacaagaggctgtttccaggacttgaacccgtgacctttcagtca 10870092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 140 - 205
Target Start/End: Original strand, 53996642 - 53996707
Alignment:
Q  140 gcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||||||||| |||||||  |||||||||||||| | ||||||||| ||||||||||||||||    
T  53996642 gcagccttaccctgttttttacacaagaggttgtttccacgacttgaacacgtgacctttcagtca 53996707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 13730681 - 13730745
Alignment:
Q  141 cagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||| |||||||  ||||||| |||||| ||||||||||||||||||||| ||||||    
T  13730681 cagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtca 13730745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 205
Target Start/End: Original strand, 5173819 - 5173861
Alignment:
Q  163 caagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  5173819 caagaggttgtttccaggacttgaacccgtgacctttcagtca 5173861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 205
Target Start/End: Original strand, 30928227 - 30928288
Alignment:
Q  144 ccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||| | |||||||  ||||||| |||||| ||||||||||||||||||||||||||||    
T  30928227 ccttaccttgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtca 30928288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 205
Target Start/End: Original strand, 45139554 - 45139619
Alignment:
Q  140 gcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||||||||| | |||||  |||||||||||||| |  |||||||||||||||||||||||||    
T  45139554 gcagccttaccctgtgttttacacaagaggttgtttccaaaacttgaacccgtgacctttcagtca 45139619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 201
Target Start/End: Complemental strand, 26782446 - 26782386
Alignment:
Q  141 cagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttca 201  Q
    |||| |||||||||||||||  |||||| ||||||| |||||||||| |||||||||||||    
T  26782446 cagcattaccctattttttacacaagagattgtttcaaggacttgaatccgtgacctttca 26782386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 203
Target Start/End: Complemental strand, 1217172 - 1217108
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagt 203  Q
    |||||||||||||||| ||||  |  ||||||| |||||| ||||||||||||||||||||||||||    
T  1217172 tacgcagccttaccctgttttaca--caagaggctgtttccaggacttgaacccgtgacctttcagt 1217108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 206
Target Start/End: Complemental strand, 12525489 - 12525422
Alignment:
Q  139 cgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcat 206  Q
    ||||||||||||||  ||||||  ||||||| |||||| |||||| ||||| ||||||||||||||||    
T  12525489 cgcagccttaccctgatttttacacaagaggctgtttccaggactcgaacctgtgacctttcagtcat 12525422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 240
Target Start/End: Complemental strand, 22609849 - 22609752
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgcc 236  Q
    |||||||||||||||| ||||| |  ||||||| |||||| | ||||||||||||| ||||| ||||||       ||||||||||||||||||||||||    
T  22609849 tacgcagccttaccctgttttt-acacaagaggctgtttccaagacttgaacccgttaccttacagtca-----catgacaacaactttaccgttgcgcc 22609756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 25944518 - 25944454
Alignment:
Q  172 gtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgccaaggc 241  Q
    ||||| ||||||||||||| ||||||||||||||      |||||||||||||||| |||||||||||||    
T  25944518 gtttccaggacttgaacccatgacctttcagtca-----cgtgacaacaactttactgttgcgccaaggc 25944454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 4495737 - 4495805
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| |||||||  ||| ||| | |||  ||||||||||||||||||||| ||||||    
T  4495737 tacgcagccttaccctgttttttacacaataggctattttcaggacttgaacccgtgaccttccagtca 4495805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 10795498 - 10795554
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtg 193  Q
    |||||||||||||||| | |||||  ||||||| |||||| ||||||||||||||||    
T  10795498 tacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 10795554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 12914108 - 12914176
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||| |||||||||| |||||||  ||||||| |||||| |||||||||||  |||||||||| ||||    
T  12914108 tacgccgccttaccctgttttttacacaagaggctgtttccaggacttgaacttgtgacctttcggtca 12914176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 14987041 - 14986989
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacc 189  Q
    |||||||||||||||| |||||||  ||||||| |||||| ||||||||||||    
T  14987041 tacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacc 14986989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 26869790 - 26869723
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| ||||| |  | ||||| |||||| |||||||||||| |||||||||||||||    
T  26869790 tacgcagccttaccctgttttt-acaccagaggctgtttccaggacttgaacctgtgacctttcagtca 26869723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 39212074 - 39212006
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||| |||||| | || ||||  ||||||||| |||| |||||||||||||||||| |||||||||    
T  39212074 tacgcagtcttaccttgttatttacacaagaggttatttccaggacttgaacccgtgacatttcagtca 39212006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 16735524 - 16735457
Alignment:
Q  137 tacgcagccttaccctattttt-taggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| ||||| ||  ||||||| |||||| |||||||||||||||||| || ||||||    
T  16735524 tacgcagccttaccctgtttttcta--caagaggctgtttcgaggacttgaacccgtgacgttacagtca 16735457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 205
Target Start/End: Complemental strand, 39203574 - 39203532
Alignment:
Q  163 caagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||| |||||| |||||||||||| |||||||||||||||    
T  39203574 caagaggctgtttcaaggacttgaacctgtgacctttcagtca 39203532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 205
Target Start/End: Original strand, 52926309 - 52926351
Alignment:
Q  163 caagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||| |||||| ||||||||||||||||||||| ||||||    
T  52926309 caagaggctgtttccaggacttgaacccgtgaccttccagtca 52926351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 7696960 - 7697026
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| ||||  |  ||||||  |||||| |||||||||||||||||||||| |||||    
T  7696960 tacgcagccttaccctgttttaca--caagagactgtttccaggacttgaacccgtgaccttttagtca 7697026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 22122990 - 22123056
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| ||||  |  ||||||  |||||| |||||||||||||| |||||||||||||    
T  22122990 tacgcagccttaccctgttttaca--caagagactgtttccaggacttgaacccgcgacctttcagtca 22123056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 7198852 - 7198788
Alignment:
Q  31 aaaagcgaaattaacttagaaatagattatgaaaggcagacaacagtatttcgaatgcaagtgaa 95  Q
    ||||| ||||||||||||||||| ||||||||| || |||||  | ||||| | |||||||||||    
T  7198852 aaaagagaaattaacttagaaattgattatgaatggtagacagtaatattttgcatgcaagtgaa 7198788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 33926162 - 33926099
Alignment:
Q  141 cagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||| ||||| |  ||||||| | |||| ||||||||||||| ||||||||||||||    
T  33926162 cagccttaccctgttttt-acacaagaggctatttccaggacttgaacccatgacctttcagtca 33926099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 4e-22; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 241
Target Start/End: Complemental strand, 29907480 - 29907380
Alignment:
Q  138 acgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgcca 237  Q
    |||||||||||| ||||||||||  ||||||| |||||||||||||||||||||||||||||||||||  || |   |||||||||||||||||| | ||    
T  29907480 acgcagccttacactattttttacacaagaggctgtttctaggacttgaacccgtgacctttcagtcacatgat---acaacaactttaccgttgtgaca 29907384  T
Q  238 aggc 241  Q
    ||||    
T  29907383 aggc 29907380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 198
Target Start/End: Complemental strand, 46354256 - 46354195
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctt 198  Q
    |||||||||||||||| |||||||  |||||||||||||| |||||||||||||||||||||    
T  46354256 tacgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgacctt 46354195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 7193143 - 7193079
Alignment:
Q  141 cagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||| |||| ||||  |||||||||||||| ||||||||||||||||||||||||||||    
T  7193143 cagccttaccatattgtttacacaagaggttgtttcgaggacttgaacccgtgacctttcagtca 7193079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 11617661 - 11617729
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||| |||||||| |||||||  |||||||||||||| |||||||||||| |||||||||||||||    
T  11617661 tacgcagtcttaccctgttttttacacaagaggttgtttccaggacttgaacctgtgacctttcagtca 11617729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 19426962 - 19427030
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||| ||||||||||||||||  ||||||| |||||| ||||||||||||||||||||||| ||||    
T  19426962 tacgcagtcttaccctattttttacacaagaggctgtttccaggacttgaacccgtgacctttcggtca 19427030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 47716521 - 47716453
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| |||||||  ||||||| |||||| ||||||||||||||||||||| ||||||    
T  47716521 tacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtca 47716453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 2541092 - 2541155
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttc 200  Q
    |||||||||||||||| |||||||  ||||||| |||||| |||||||||||||||||||||||    
T  2541092 tacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttc 2541155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 136 - 205
Target Start/End: Complemental strand, 27629697 - 27629628
Alignment:
Q  136 ttacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||| ||||||||| |||||||  ||||||| |||||| ||||||||||||||||||||||| ||||    
T  27629697 ttacgcaaccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcggtca 27629628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 7645010 - 7644950
Alignment:
Q  145 cttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||| |||||||  ||||||| |||||| ||||||||||||||||||||||||||||    
T  7645010 cttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtca 7644950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 16341340 - 16341276
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttca 201  Q
    |||| ||||||||||| |||||||  ||||||| ||||||||| |||||||||||||||||||||    
T  16341340 tacgtagccttaccctgttttttacacaagaggctgtttctagaacttgaacccgtgacctttca 16341276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 241
Target Start/End: Original strand, 28362218 - 28362317
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgcc 236  Q
    ||||||||||||||   |||||||  |||||||  |||||||||||||||||| |||||||||||| ||       ||||||||||||||||||||||||    
T  28362218 tacgcagccttaccaagttttttacacaagaggcagtttctaggacttgaacctgtgacctttcagcca-----catgacaacaactttaccgttgcgcc 28362312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 42805582 - 42805518
Alignment:
Q  141 cagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||| |||||||  ||||||| |||||| ||||||||||||||||||||| ||||||    
T  42805582 cagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtca 42805518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 43557534 - 43557466
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||||||||| || |||||||  ||||||| |||||| ||||||||||||| ||||||||||||||    
T  43557534 tacgcagccttactctgttttttacacaagaggctgtttccaggacttgaacccatgacctttcagtca 43557466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 18512526 - 18512588
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttc 200  Q
    |||||||||||||||||||||| |  ||||| |||||||| |||||||||||||||||||||||    
T  18512526 tacgcagccttaccctattttt-acacaagatgttgtttccaggacttgaacccgtgacctttc 18512588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 42495934 - 42496007
Alignment:
Q  163 caagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttacc-gttgcgccaagg 240  Q
    ||||||| |||||| ||||||||||||||||||||||||||||     | |||||||||||||||| ||||||||||||    
T  42495934 caagaggctgtttccaggacttgaacccgtgacctttcagtca-----tatgacaacaactttaccagttgcgccaagg 42496007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 198
Target Start/End: Complemental strand, 7879700 - 7879639
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctt 198  Q
    |||||||||||||| | |||||||  |||||| ||||||| |||||||||||||||||||||    
T  7879700 tacgcagccttaccttgttttttacacaagagattgtttccaggacttgaacccgtgacctt 7879639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 10693146 - 10693212
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| ||||  |  ||||||| |||||| ||||||||||||||||||||||||||||    
T  10693146 tacgcagccttaccctcttttaca--caagaggctgtttccaggacttgaacccgtgacctttcagtca 10693212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 238
Target Start/End: Complemental strand, 19265876 - 19265781
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgcc 236  Q
    |||||||||||||||| ||||| |  |||| || ||| || | ||||||||||||||||||||||||||      |||||||||||||||||||||||||    
T  19265876 tacgcagccttaccctcttttt-acacaagcggctgtatccaagacttgaacccgtgacctttcagtca-----cgtgacaacaactttaccgttgcgcc 19265783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 241
Target Start/End: Complemental strand, 19266512 - 19266413
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgcc 236  Q
    |||||||||||||||| ||||||| ||||| || | |||  |||||||||||||  |||||||||||||       ||||||||||||||||||||| ||    
T  19266512 tacgcagccttaccctgttttttacgcaagtggctattttcaggacttgaacccacgacctttcagtca-----catgacaacaactttaccgttgcacc 19266418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 32233208 - 32233275
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||| |||||||||| ||||| |  |||||||||||||| ||||||||||||| ||||||||||||||    
T  32233208 tacgctgccttaccctgttttt-acacaagaggttgtttccaggacttgaacccatgacctttcagtca 32233275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 33871983 - 33872050
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||| ||| ||||| |  |||||||||||||| |||||||||||||| |||||||||||||    
T  33871983 tacgcagccttatcctgttttt-acacaagaggttgtttccaggacttgaacccgcgacctttcagtca 33872050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 203
Target Start/End: Original strand, 21172082 - 21172146
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagt 203  Q
    |||||||||||||||| ||||  |  ||||||| |||||| ||||||||||||||||||||||||||    
T  21172082 tacgcagccttaccctgttttaca--caagaggctgtttccaggacttgaacccgtgacctttcagt 21172146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 35203501 - 35203430
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgt 208  Q
    ||||||| |||| ||| |||||||  ||||||  |||||| |||||||||||||||||||||||| ||||||    
T  35203501 tacgcagtcttatcctgttttttacacaagagaatgtttccaggacttgaacccgtgacctttcaatcatgt 35203430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 204
Target Start/End: Complemental strand, 6736926 - 6736885
Alignment:
Q  163 caagaggttgtttctaggacttgaacccgtgacctttcagtc 204  Q
    |||||||||||||  |||||||||||||||||||||||||||    
T  6736926 caagaggttgttttgaggacttgaacccgtgacctttcagtc 6736885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 12473366 - 12473301
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcag 202  Q
    |||||| ||||||||| ||||| |  |||||||||||||  ||||||||||||| |||||||||||    
T  12473366 tacgcatccttaccctgtttttgacacaagaggttgtttgcaggacttgaacccatgacctttcag 12473301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 42391173 - 42391239
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| ||||  |  ||||| | |||||| ||||||||||||||||||||||||||||    
T  42391173 tacgcagccttaccctgttttaca--caagaagctgtttccaggacttgaacccgtgacctttcagtca 42391239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 40463938 - 40463871
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||||||||||| | ||||||  ||||||  |||||||| ||||||||||||||||||| ||||||    
T  40463938 tacgcagccttaccc-agtttttacacaagagactgtttctatgacttgaacccgtgaccttacagtca 40463871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 241
Target Start/End: Original strand, 42101958 - 42102057
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgcc 236  Q
    |||||||  ||||||| ||||||| | |||||| |||||| |||||||||||   ||||||| ||||||      ||||||||||||||||||||| |||    
T  42101958 tacgcagtgttaccctgttttttacggaagaggctgtttccaggacttgaacttttgaccttccagtca-----cgtgacaacaactttaccgttgtgcc 42102052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 42798731 - 42798663
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||| | |||||||  ||||||  |||||| | ||||||||||||||||||| ||||||    
T  42798731 tacgcagccttaccttgttttttacacaagagactgtttccaagacttgaacccgtgaccttccagtca 42798663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 241
Target Start/End: Original strand, 3469269 - 3469351
Alignment:
Q  154 ttttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgccaaggc 241  Q
    |||||||  ||||||  ||||||||||||||||  | |||||||||||||||  ||     |||||||||||||||||||||||||||    
T  3469269 ttttttacacaagagaatgtttctaggacttgagtctgtgacctttcagtcacatg-----acaacaactttaccgttgcgccaaggc 3469351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 202
Target Start/End: Original strand, 31591206 - 31591245
Alignment:
Q  163 caagaggttgtttctaggacttgaacccgtgacctttcag 202  Q
    |||||||||||||| ||||||||||| |||||||||||||    
T  31591206 caagaggttgtttccaggacttgaactcgtgacctttcag 31591245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 205
Target Start/End: Original strand, 38262278 - 38262337
Alignment:
Q  146 ttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||| |||||||||  ||||||  |||||| ||||||||||||||||||||| ||||||    
T  38262278 ttaccatattttttacacaagagactgtttccaggacttgaacccgtgaccttccagtca 38262337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 48123566 - 48123656
Alignment:
Q  146 ttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgccaaggc 241  Q
    ||||||| || ||||  ||||||| |||||| ||||||||||||| ||||||||||| ||       ||| |||||||||||||||||||||||||    
T  48123566 ttaccctgttatttacacaagaggctgtttccaggacttgaacccatgacctttcagaca-----catgataacaactttaccgttgcgccaaggc 48123656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 205
Target Start/End: Original strand, 48735219 - 48735262
Alignment:
Q  163 caagaggttgtttcta-ggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||| | |||||||||||||||||||||||||||    
T  48735219 caagaggttgtttccaaggacttgaacccgtgacctttcagtca 48735262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 205
Target Start/End: Original strand, 28078238 - 28078272
Alignment:
Q  171 tgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||||||||||||||| ||||||    
T  28078238 tgtttctaggacttgaacccgtgaccttacagtca 28078272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 205
Target Start/End: Complemental strand, 32758297 - 32758255
Alignment:
Q  163 caagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||| |||||| |||||||||||| |||||||||||||||    
T  32758297 caagaggctgtttccaggacttgaacctgtgacctttcagtca 32758255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 205
Target Start/End: Original strand, 47077960 - 47077994
Alignment:
Q  171 tgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||| ||||||||||||||||||||||||||||    
T  47077960 tgtttccaggacttgaacccgtgacctttcagtca 47077994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 205
Target Start/End: Original strand, 7794606 - 7794647
Alignment:
Q  164 aagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||| |||||| ||||||||||||||||||||| ||||||    
T  7794606 aagaggctgtttccaggacttgaacccgtgaccttccagtca 7794647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 18747549 - 18747480
Alignment:
Q  137 tacgcagccttacccta-ttttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||||||||||||  |||||||  ||| ||| |||||| | ||||||| ||||||||||||||||||    
T  18747549 tacgcagccttaccctgcttttttacacaaaaggctgtttccaagacttgatcccgtgacctttcagtca 18747480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 213 - 242
Target Start/End: Original strand, 36267903 - 36267932
Alignment:
Q  213 tgacaacaactttaccgttgcgccaaggca 242  Q
    ||||||||||||||||||||||||||||||    
T  36267903 tgacaacaactttaccgttgcgccaaggca 36267932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 22699043 - 22699111
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||| |||||||| |||||||  ||||||  | |||| ||||||||||||| | ||||||||||||    
T  22699043 tacgcagtcttaccctgttttttacacaagagactatttccaggacttgaacccataacctttcagtca 22699111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 4e-22; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 139 - 240
Target Start/End: Complemental strand, 23974840 - 23974744
Alignment:
Q  139 cgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgccaa 238  Q
    |||||||||||||| |||||||  |||||||||||||| ||||||||||||||||||||| ||||||       ||||||||||||||||||||||||||    
T  23974840 cgcagccttaccctcttttttacacaagaggttgtttccaggacttgaacccgtgaccttccagtca-----catgacaacaactttaccgttgcgccaa 23974746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 38879643 - 38879575
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| |||||||  ||||||| |||||| ||||||||||||||||||||||||||||    
T  38879643 tacgcagccttaccctgttttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtca 38879575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 24448952 - 24448884
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||||||||||||||||||||  ||| ||| |||||| ||||||||||||||||||||| ||||||    
T  24448952 tacgcagccttaccctattttttacacaaaaggctgtttccaggacttgaacccgtgaccttccagtca 24448884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 4619179 - 4619247
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| |||||||  ||||||| | |||| ||||||||||||||||||||| ||||||    
T  4619179 tacgcagccttaccctgttttttacacaagaggctatttccaggacttgaacccgtgaccttccagtca 4619247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 27328814 - 27328746
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| |||||||  ||||||  |||||| |||||||||||| |||||||||||||||    
T  27328814 tacgcagccttaccctgttttttacacaagagactgtttccaggacttgaacctgtgacctttcagtca 27328746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 241
Target Start/End: Complemental strand, 39301185 - 39301086
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgcc 236  Q
    |||||| ||||||||| |||| ||  |||||||||||| | | |||||||||||||||||||||||| |       ||||||||||||||||||||||||    
T  39301185 tacgcatccttaccctgttttatacacaagaggttgttcccaagacttgaacccgtgacctttcagtaa-----catgacaacaactttaccgttgcgcc 39301091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 142 - 241
Target Start/End: Original strand, 10634224 - 10634318
Alignment:
Q  142 agccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgccaaggc 241  Q
    |||||||||||  |||||   || ||||||||||||||||||||||||| ||||||||||||||       |||||||||||| ||||||||||||||||    
T  10634224 agccttaccctgatttttgcacacgaggttgtttctaggacttgaacccatgacctttcagtca-----cttgacaacaacttcaccgttgcgccaaggc 10634318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 204
Target Start/End: Complemental strand, 22025601 - 22025538
Alignment:
Q  141 cagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtc 204  Q
    |||||||||||| |||||||  ||||||| |||||| ||||||||||||| |||||||||||||    
T  22025601 cagccttaccctgttttttacacaagaggctgtttccaggacttgaacccatgacctttcagtc 22025538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 35710372 - 35710309
Alignment:
Q  138 acgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagt 203  Q
    ||||||||||||||||||||  |  ||||||| |||||| ||||||||||||||||||||||||||    
T  35710372 acgcagccttaccctattttaca--caagaggctgtttccaggacttgaacccgtgacctttcagt 35710309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 32703484 - 32703418
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| ||||  |  ||||||| |||||| ||||||||||||||||||||||||||||    
T  32703484 tacgcagccttaccctgttttaca--caagaggctgtttccaggacttgaacccgtgacctttcagtca 32703418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 37024629 - 37024695
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| ||||  |  ||||||| |||||| ||||||||||||||||||||||||||||    
T  37024629 tacgcagccttaccctgttttaca--caagaggctgtttccaggacttgaacccgtgacctttcagtca 37024695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 43334265 - 43334196
Alignment:
Q  137 tacgcagccttaccctatttttt-aggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| |||||| |  || |||| |||||| ||||||||||||||||||||||||||||    
T  43334265 tacgcagccttaccctgtttttttacacaggaggctgtttccaggacttgaacccgtgacctttcagtca 43334196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 41014380 - 41014313
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| ||||| |  ||||||| |||||| ||||||||||||||||||||| ||||||    
T  41014380 tacgcagccttaccctgttttt-acacaagaggctgtttccaggacttgaacccgtgaccttccagtca 41014313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 42924907 - 42924975
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||| ||||||||| |||||||  ||||| |||||||  ||||||||||| ||||||||||||||||    
T  42924907 tacgcaaccttaccctgttttttacacaagatgttgttttcaggacttgaactcgtgacctttcagtca 42924975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 205
Target Start/End: Complemental strand, 1565476 - 1565425
Alignment:
Q  154 ttttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||  |||||||||||||| |||||||||||||| |||||||||||||    
T  1565476 ttttttactcaagaggttgtttccaggacttgaacccgcgacctttcagtca 1565425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 209
Target Start/End: Original strand, 34074652 - 34074707
Alignment:
Q  154 ttttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtg 209  Q
    |||||||  ||||||| ||||||||||||||||||  |||||||||||||||||||    
T  34074652 ttttttacacaagaggctgtttctaggacttgaacttgtgacctttcagtcatgtg 34074707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 198
Target Start/End: Complemental strand, 1405241 - 1405188
Alignment:
Q  145 cttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctt 198  Q
    ||||| ||||||||||   ||||||||||||| |||||||||||||||||||||    
T  1405241 cttactctattttttatataagaggttgtttccaggacttgaacccgtgacctt 1405188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 202
Target Start/End: Original strand, 28516507 - 28516572
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcag 202  Q
    ||||||||| || ||| |||||||  ||||||| |||||| | |||||||||||||||||||||||    
T  28516507 tacgcagccctagcctgttttttacacaagaggatgtttccaagacttgaacccgtgacctttcag 28516572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 205
Target Start/End: Original strand, 12006408 - 12006471
Alignment:
Q  142 agccttaccctattttttaggcaagaggttgtttctaggacttgaa-cccgtgacctttcagtca 205  Q
    |||||||||||||||||||   ||||||||||||| | |||||||| ||||||||||||||||||    
T  12006408 agccttaccctattttttacataagaggttgtttcca-gacttgaaccccgtgacctttcagtca 12006471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 241
Target Start/End: Original strand, 19143016 - 19143114
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgcc 236  Q
    |||||||||||||||| ||||| |  |||||||||||||| |||||||||||| ||| | ||| |||||      |||||||||| |||||| |||||||    
T  19143016 tacgcagccttaccctgttttt-acacaagaggttgtttccaggacttgaacctgtggcattttagtca-----cgtgacaacaattttaccattgcgcc 19143109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 43574668 - 43574609
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacc 196  Q
    |||||||||||||||| |||| ||  |||||| ||||||| ||||||||||| |||||||    
T  43574668 tacgcagccttaccctgttttctacacaagagattgtttccaggacttgaacacgtgacc 43574609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 205
Target Start/End: Complemental strand, 1850676 - 1850634
Alignment:
Q  163 caagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||||| ||||  |||||||||||||||||||||||||||    
T  1850676 caagaggttatttccgggacttgaacccgtgacctttcagtca 1850634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 205
Target Start/End: Original strand, 22907963 - 22908005
Alignment:
Q  163 caagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||| ||||||| |||||||||||| ||||||||||||||    
T  22907963 caagaggctgtttcttggacttgaacccttgacctttcagtca 22908005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 8170057 - 8170123
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| ||||  |  ||| ||| |||||| ||||||||||||||||||||||| ||||    
T  8170057 tacgcagccttaccctgttttaca--caaaaggctgtttccaggacttgaacccgtgacctttcggtca 8170123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 13801842 - 13801895
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaaccc 190  Q
    |||||||||||||||| |||||||  ||||||| || ||| |||||||||||||    
T  13801842 tacgcagccttaccctgttttttacacaagaggctgcttccaggacttgaaccc 13801895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 241
Target Start/End: Original strand, 39079882 - 39079938
Alignment:
Q  180 gacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgccaaggc 241  Q
    ||||||||||||||||||||| ||||  ||     |||||||||||||||||||||||||||    
T  39079882 gacttgaacccgtgacctttctgtcacatg-----acaacaactttaccgttgcgccaaggc 39079938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 22187347 - 22187279
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||| |||| | | |||||||  ||||||| |||||| ||||||| |||| |||||||||||||||    
T  22187347 tacgcagtcttatcatgttttttacacaagaggctgtttccaggacttaaaccggtgacctttcagtca 22187279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 241
Target Start/End: Original strand, 44781583 - 44781678
Alignment:
Q  141 cagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgccaagg 240  Q
    |||||||||||| | |||||  |||||||||||||| ||||||||||||||||| ||||||||||      |||||||||||||||||||||||||||||    
T  44781583 cagccttaccctgtcttttacacaagaggttgtttccaggacttgaacccgtgaactttcagtca-----cgtgacaacaactttaccgttgcgccaagg 44781677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 142 - 233
Target Start/End: Complemental strand, 22598214 - 22598128
Alignment:
Q  142 agccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgc 233  Q
    ||||||||||| |||||||  |||||||||||||| |||| |||||||||||||||||||||||     |||||||||||||||||||||||    
T  22598214 agccttaccctgttttttacacaagaggttgtttccaggatttgaacccgtgacctttcagtca-----tgtgacaacaactttaccgttgc 22598128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 137 - 241
Target Start/End: Original strand, 42083772 - 42083871
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgcc 236  Q
    ||||||||||| ||| ||||||||  ||| ||| |||||| ||||||||||||||||||||||||||||      |||||||||| ||||||||||||||    
T  42083772 tacgcagccttgccccattttttacacaaaaggctgtttccaggacttgaacccgtgacctttcagtca-----cgtgacaacaattttaccgttgcgcc 42083866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 28817699 - 28817767
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| |||||||  ||||||| |||||| ||||||||||||||||||||| ||||||    
T  28817699 tacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtca 28817767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 29521758 - 29521826
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| |||||||  ||||||| |||||| ||||||||||||||||||||| ||||||    
T  29521758 tacgcagccttaccctgttttttaaacaagaggctgtttccaggacttgaacccgtgaccttccagtca 29521826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 36720858 - 36720790
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| |||||||  ||||||| |||||| ||||||||||||||||||||| ||||||    
T  36720858 tacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtca 36720790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 240
Target Start/End: Original strand, 39461069 - 39461168
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttacc-gttgcgc 235  Q
    ||||||||||||| || |||||||  ||||||| |||||| |||||||||||||||||||||||||||     |  |||||||||||||||| |||||||    
T  39461069 tacgcagccttactctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtc-----tcatgacaacaactttaccagttgcgc 39461163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 35105985 - 35105920
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcag 202  Q
    ||||||||||||| || | |||||  |||||||||||||| |||||||||||||||||||||||||    
T  35105985 tacgcagccttacactctcttttacacaagaggttgtttccaggacttgaacccgtgacctttcag 35105920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 137 - 198
Target Start/End: Complemental strand, 44530211 - 44530150
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctt 198  Q
    |||||||||||||||| |||||||  |||||||||||||| | |||||||||||||||||||    
T  44530211 tacgcagccttaccctgttttttacacaagaggttgtttccaagacttgaacccgtgacctt 44530150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 7136602 - 7136670
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||||||||||||  ||||||  |||||||||||||| ||||||||||||| ||||||| ||||||    
T  7136602 tacgcagccttaccctggtttttacacaagaggttgtttccaggacttgaacccatgaccttccagtca 7136670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 13160763 - 13160696
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| ||||| |  ||||||| |||||||||||||||||||||||||||| ||||||    
T  13160763 tacgcagccttaccctgttttt-acacaagaggctgtttctaggacttgaacccgtgaccttacagtca 13160696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 6760884 - 6760786
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttacc-gttgcgc 235  Q
    |||| ||||||||||| |||||||  ||||||| |||||| |||||||||||||||||||||  |||||     | |||||||||||||||| |||||||    
T  6760884 tacgaagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttctagtca-----tatgacaacaactttaccagttgcgc 6760790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 20284144 - 20284214
Alignment:
Q  137 tacgcagccttaccctatttttt--aggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| ||||||  |  ||||||| |||||| ||||||||||||||||||||||||||||    
T  20284144 tacgcagccttacccttttttttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtca 20284214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 241
Target Start/End: Original strand, 30962847 - 30962945
Alignment:
Q  138 acgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgcca 237  Q
    ||||||||| |||||||||||||  ||||||| |||||| ||||||||||  |||||||||||| |||       ||||||||||||| |||||||||||    
T  30962847 acgcagcctaaccctattttttacacaagaggctgtttccaggacttgaagtcgtgacctttcaatca-----catgacaacaacttttccgttgcgcca 30962941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 198
Target Start/End: Original strand, 8897837 - 8897898
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctt 198  Q
    |||| |||||||||||||||||||  |||| ||||||||| ||||||| |||||||||||||    
T  8897837 tacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgacctt 8897898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 12670323 - 12670389
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| ||||  |  ||||||| |||||| ||||||||||||||||||||||||||||    
T  12670323 tacgcagccttaccctgttttaca--caagaggctgtttccaggacttgaacccgtgacctttcagtca 12670389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 21070772 - 21070843
Alignment:
Q  137 tacgcagccttaccctatttttt---aggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| ||||||   |  ||||||| |||||| ||||||||||||||||||||||||||||    
T  21070772 tacgcagccttaccctttttttttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtca 21070843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 8484011 - 8484079
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||||||| |||| |||||||  |||||||||||||| ||||||||||||| |||| ||| |||||    
T  8484011 tacgcagccttgccctgttttttacacaagaggttgtttccaggacttgaacccatgacatttaagtca 8484079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 18164833 - 18164900
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||| ||||||||| ||||| |  ||||||| |||||| ||||||||||||||||||||||||||||    
T  18164833 tacgcaaccttaccctgttttt-acacaagaggctgtttccaggacttgaacccgtgacctttcagtca 18164900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 24365134 - 24365201
Alignment:
Q  139 cgcagccttaccct-attttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||| ||||||||  ||||||| |||||||||| |||||||||||||| ||| |||||    
T  24365134 cgcagccttaccctgattttttacacaagaggctgtttctagggcttgaacccgtgacattttagtca 24365201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 205
Target Start/End: Original strand, 20869595 - 20869637
Alignment:
Q  163 caagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||| |||||| ||||||||||||||||||||||||||||    
T  20869595 caagaggctgtttccaggacttgaacccgtgacctttcagtca 20869637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 198
Target Start/End: Complemental strand, 26954195 - 26954133
Alignment:
Q  137 tacgcagccttaccctatttttt-aggcaagaggttgtttctaggacttgaacccgtgacctt 198  Q
    |||||||||||||||| |||||| |  ||||||| |||||| |||||||||||||||||||||    
T  26954195 tacgcagccttaccctgtttttttacacaagaggctgtttccaggacttgaacccgtgacctt 26954133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 205
Target Start/End: Original strand, 30454194 - 30454236
Alignment:
Q  163 caagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||| |||||| ||||||||||||||||||||||||||||    
T  30454194 caagaggctgtttccaggacttgaacccgtgacctttcagtca 30454236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 205
Target Start/End: Complemental strand, 17823639 - 17823570
Alignment:
Q  136 ttacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||| |||| |||  ||||||  ||||||| |||||| ||||||||||||||||||||||| ||||    
T  17823639 ttacgcagtcttatcctggtttttacacaagaggctgtttccaggacttgaacccgtgacctttcggtca 17823570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 242
Target Start/End: Complemental strand, 28407491 - 28407377
Alignment:
Q  122 aaggggtcccaccattacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaa 221  Q
    ||||||||||||||||  |  |||||||||| ||||| |  ||||||| |||||| ||||||||||||||||||||| ||||||       |||||||||    
T  28407491 aaggggtcccaccatttggt-gccttaccctgttttt-acacaagaggctgtttccaggacttgaacccgtgaccttccagtca-----catgacaacaa 28407399  T
Q  222 ctttacc-gttgcgccaaggca 242  Q
    ||||||| ||||||||||||||    
T  28407398 ctttaccagttgcgccaaggca 28407377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 31457234 - 31457170
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcag 202  Q
    |||||||||||  ||||||||| |  |||||||||||||  |||||||||||||||||||||||||    
T  31457234 tacgcagccttttcctattttt-acacaagaggttgtttacaggacttgaacccgtgacctttcag 31457170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 193
Target Start/End: Original strand, 5135366 - 5135418
Alignment:
Q  141 cagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtg 193  Q
    |||||||||||| |||||||  ||||||| |||||| ||||||||||||||||    
T  5135366 cagccttaccctcttttttacacaagaggctgtttccaggacttgaacccgtg 5135418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 241
Target Start/End: Original strand, 14018042 - 14018141
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgcc 236  Q
    ||||||| || ||||| |||||||  ||||||  |||||| | ||||||||||| |||||||||| |||      ||||||||||| |||||||||||||    
T  14018042 tacgcagtctcaccctgttttttacacaagagactgtttccaagacttgaacccatgacctttcaatca-----cgtgacaacaacattaccgttgcgcc 14018136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 25250584 - 25250516
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||||| ||||||||||||||  ||| ||| |||||| |||||||||||  |||||||| ||||||    
T  25250584 tacgcagccataccctattttttacacaataggctgtttccaggacttgaacatgtgaccttccagtca 25250516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 35261741 - 35261673
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||| ||||||||| |||||||  ||||||  |||||| ||| ||||||||||||||||| ||||||    
T  35261741 tacgcaaccttaccctgttttttacacaagagactgtttccagggcttgaacccgtgaccttccagtca 35261673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 205
Target Start/End: Complemental strand, 2626564 - 2626513
Alignment:
Q  154 ttttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||  ||||||| |||||| ||||||||||||||||||||||| ||||    
T  2626564 ttttttacacaagaggctgtttccaggacttgaacccgtgacctttcggtca 2626513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 200
Target Start/End: Complemental strand, 389707 - 389642
Alignment:
Q  137 tacgcagccttaccctattttttaggca--agaggttgtttctaggacttgaacccgtgacctttc 200  Q
    |||||| ||||||||| |||||| | ||  ||||| |||||| |||||||||||||||||||||||    
T  389707 tacgcaaccttaccctgtttttttgacacaagagggtgtttccaggacttgaacccgtgacctttc 389642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 24245478 - 24245445
Alignment:
Q  172 gtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||| ||||||||||||||||||||||||||||    
T  24245478 gtttccaggacttgaacccgtgacctttcagtca 24245445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 198
Target Start/End: Complemental strand, 45071326 - 45071266
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctt 198  Q
    |||||||||||||||| ||||| |  ||||||| |||||| || ||||||||||||||||||    
T  45071326 tacgcagccttaccctgttttt-acacaagaggctgtttccagaacttgaacccgtgacctt 45071266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 137 - 241
Target Start/End: Original strand, 2435860 - 2435959
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgcc 236  Q
    ||||||| |||||||||||||| |  || |||| |||||| ||||||||||||||||||||||||||||      |||||||||||||||||||||||||    
T  2435860 tacgcaggcttaccctatttttcacacaggaggctgtttccaggacttgaacccgtgacctttcagtca-----cgtgacaacaactttaccgttgcgcc 2435954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 137 - 241
Target Start/End: Original strand, 17470419 - 17470518
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgcc 236  Q
    |||||||||||||||| |||||||  ||||||| |||||||||||||||||||| ||||| ||||||||      |||||||||||||||||||||| ||    
T  17470419 tacgcagccttaccctgttttttacacaagaggctgtttctaggacttgaacccatgaccattcagtca-----cgtgacaacaactttaccgttgcacc 17470513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 141 - 239
Target Start/End: Original strand, 18724622 - 18724715
Alignment:
Q  141 cagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgccaag 239  Q
    |||||||||||| |||||||  ||||||| |||||| ||||||||||||||||||||||||||||       |||||||||||||||||||||||||||    
T  18724622 cagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtca-----catgacaacaactttaccgttgcgccaag 18724715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 241
Target Start/End: Complemental strand, 22327180 - 22327085
Alignment:
Q  141 cagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgccaagg 240  Q
    |||||||||||| |||||||  |||||||||||||| |||||||||||||| |||||||||||||       ||||||||||||| ||||||||||||||    
T  22327180 cagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgcgacctttcagtca-----catgacaacaactttgccgttgcgccaagg 22327086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 152 - 241
Target Start/End: Original strand, 2435981 - 2436065
Alignment:
Q  152 tattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgccaaggc 241  Q
    |||||||||  || ||||||||||| ||||||||||||||||||||||||||||      |||||||||||||||||||||| |||||||    
T  2435981 tattttttacacaggaggttgtttccaggacttgaacccgtgacctttcagtca-----cgtgacaacaactttaccgttgcaccaaggc 2436065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 240
Target Start/End: Complemental strand, 10668310 - 10668206
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttacc-gttgcgc 235  Q
    |||||| ||||||| | |||||||  ||||||| |||||| ||||||||||||||||||||||||||||  |    |||||||||||||||| |||||||    
T  10668310 tacgcaaccttaccttgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatcacatgacaacaactttaccagttgcgc 10668211  T
Q  236 caagg 240  Q
    |||||    
T  10668210 caagg 10668206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 11596597 - 11596530
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| ||||| |  ||||||||||||||||||||||||||||||||| |||||||||    
T  11596597 tacgcagccttaccctgttttt-acacaagaggttgtttctaggacttgaacccgtgacatttcagtca 11596530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 240
Target Start/End: Original strand, 32632630 - 32632728
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttacc-gttgcgc 235  Q
    |||||||||||||||| ||||| |  ||||||| |||||| ||||||||||||||||||||||||||||     | |||||||||||||||| |||||||    
T  32632630 tacgcagccttaccctgttttt-acacaagaggctgtttccaggacttgaacccgtgacctttcagtca-----tatgacaacaactttaccagttgcgc 32632723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 46991885 - 46991821
Alignment:
Q  141 cagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||| |||||||  |||||||||||||| ||||||||||||||||||||| ||||||    
T  46991885 cagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgaccttccagtca 46991821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 6925183 - 6925117
Alignment:
Q  139 cgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||||||||||||||||||  ||||||| | |||| ||||||||||||||||||||| ||||||    
T  6925183 cgcagccttaccctattttttacacaagaggctatttccaggacttgaacccgtgaccttccagtca 6925117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 241
Target Start/End: Complemental strand, 35019289 - 35019216
Alignment:
Q  163 caagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgccaaggc 241  Q
    |||||||||||||  |||||||||| | |||||||||||||||||||     |||||||||||||||||||||||||||    
T  35019289 caagaggttgtttacaggacttgaatctgtgacctttcagtcatgtg-----acaacaactttaccgttgcgccaaggc 35019216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 137 - 198
Target Start/End: Original strand, 30395801 - 30395862
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctt 198  Q
    |||||||||||||||| |||||||  ||||||| |||||| |||||||||||||||||||||    
T  30395801 tacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctt 30395862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 38478355 - 38478421
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| ||||  |  ||||||| |||||||||||||||||||||||||||||||||||    
T  38478355 tacgcagccttaccctgttttaca--caagaggctgtttctaggacttgaacccgtgacctttcagtca 38478421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 18944728 - 18944660
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| |||||||  ||||||| |||||| ||| |||||||| |||||||||||||||    
T  18944728 tacgcagccttaccctgttttttacacaagaggctgtttccaggccttgaacctgtgacctttcagtca 18944660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 154 - 241
Target Start/End: Complemental strand, 23371192 - 23371110
Alignment:
Q  154 ttttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgccaaggc 241  Q
    |||||||  |||| || |||||||||||||||||||||||||||||||||||     || || ||||||||||| |||||||||||||    
T  23371192 ttttttacccaagtggctgtttctaggacttgaacccgtgacctttcagtca-----tgcgaaaacaactttactgttgcgccaaggc 23371110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 231
Target Start/End: Original strand, 35117845 - 35117930
Alignment:
Q  141 cagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgtt 231  Q
    |||||||||||| | |||||  ||||||| | |||| ||||||||||||||||||||||||||||      ||||||||||||||||||||    
T  35117845 cagccttaccctgtattttacacaagaggctatttccaggacttgaacccgtgacctttcagtca-----cgtgacaacaactttaccgtt 35117930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 34725171 - 34725237
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| ||||  |  ||||||| |||||| ||||||||||||||||||||||||||||    
T  34725171 tacgcagccttaccctgttttaca--caagaggctgtttccaggacttgaacccgtgacctttcagtca 34725237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 35005205 - 35005140
Alignment:
Q  140 gcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||||||||| |||||||  ||||||| |||||  | ||||||||||||||||||||||||||    
T  35005205 gcagccttaccctgttttttacacaagaggctgttttcaagacttgaacccgtgacctttcagtca 35005140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 20004165 - 20004233
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||| | |||||||  | ||||| |||||| ||||||||||||||||||||| ||||||    
T  20004165 tacgcagccttaccttgttttttacacgagaggctgtttccaggacttgaacccgtgaccttccagtca 20004233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 239
Target Start/End: Complemental strand, 20036279 - 20036208
Alignment:
Q  163 caagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgccaag 239  Q
    |||||| ||||||| ||||||||||||||||||||||||||||       |||||||||||||||| ||||||||||    
T  20036279 caagagtttgtttccaggacttgaacccgtgacctttcagtca-----catgacaacaactttaccattgcgccaag 20036208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 23768393 - 23768461
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| |||||||  ||||||| |||||| | |||||||||| |||||||| ||||||    
T  23768393 tacgcagccttaccctgttttttacacaagaggctgtttccatgacttgaacctgtgaccttacagtca 23768461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 25468336 - 25468400
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttca 201  Q
    |||||| |||||||||  ||||||  |||||||||||||| ||||||||||||| ||||||||||    
T  25468336 tacgcaaccttaccctgatttttacacaagaggttgtttccaggacttgaacccatgacctttca 25468400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 27201732 - 27201664
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| ||| | |  ||||||| |||||| ||||||||||||| ||||||||||||||    
T  27201732 tacgcagccttaccctgtttctgacacaagaggctgtttccaggacttgaacccatgacctttcagtca 27201664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 31272448 - 31272515
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||| | ||||| |  |||||||||||||| |||||||||||| |||||||||||||||    
T  31272448 tacgcagccttaccatgttttt-acacaagaggttgtttccaggacttgaacctgtgacctttcagtca 31272515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 41319879 - 41319947
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| |||||||  ||||||  |||||| ||||||| |||| |||||||||||||||    
T  41319879 tacgcagccttaccctgttttttacacaagagactgtttccaggacttaaacctgtgacctttcagtca 41319947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 46248026 - 46248094
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||| |||||||| |||||||  ||||||| |||||| | |||||||||||||||| |||||||||    
T  46248026 tacgcagtcttaccctgttttttacacaagaggctgtttccaagacttgaacccgtgacatttcagtca 46248094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 6983911 - 6983981
Alignment:
Q  166 gaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgccaaggc 241  Q
    |||| |||||| |||||||||||| |||||||||||||||      ||||||||||||||||| ||||||||||||    
T  6983911 gaggctgtttccaggacttgaacctgtgacctttcagtca-----cgtgacaacaactttaccattgcgccaaggc 6983981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 205
Target Start/End: Complemental strand, 9939545 - 9939478
Alignment:
Q  138 acgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||| ||||||| | ||| |||  |||||||||||||| ||||||||||| ||||||||||||||||    
T  9939545 acgcaaccttaccatgtttcttaaacaagaggttgtttccaggacttgaactcgtgacctttcagtca 9939478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 19414497 - 19414455
Alignment:
Q  164 aagaggttgtttctaggacttgaacccgtgacctttcagtcat 206  Q
    |||||| | ||||||||||||||||||||||||||||||||||    
T  19414497 aagaggctctttctaggacttgaacccgtgacctttcagtcat 19414455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 35253260 - 35253326
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| ||||  |  ||||||| |||||| ||||||||||||||||| ||||||||||    
T  35253260 tacgcagccttaccctgttttaca--caagaggctgtttcgaggacttgaacccgtgatctttcagtca 35253326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 241
Target Start/End: Complemental strand, 50812025 - 50811925
Alignment:
Q  137 tacgcagccttaccctatttttt-aggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgc 235  Q
    |||||| ||||||||| |||||| |  ||||| | |||||| ||||| |||  |||||||||||||||||      ||||||||||||||||||||||||    
T  50812025 tacgcaaccttaccctgtttttttacacaagaagctgtttccaggacatgattccgtgacctttcagtca-----cgtgacaacaactttaccgttgcgc 50811931  T
Q  236 caaggc 241  Q
    ||||||    
T  50811930 caaggc 50811925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 10378834 - 10378897
Alignment:
Q  173 tttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgccaaggc 241  Q
    |||| ||||||||||||||| ||||||||||||      |||||||||||||||||||||| |||||||    
T  10378834 tttccaggacttgaacccgtaacctttcagtca-----cgtgacaacaactttaccgttgcaccaaggc 10378897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 14617123 - 14617055
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||| ||||||| | || ||||  ||||||| |||||| ||||||||||| ||||||||||||||||    
T  14617123 tacgcaaccttaccttgttatttacacaagaggctgtttccaggacttgaactcgtgacctttcagtca 14617055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 241
Target Start/End: Original strand, 44485182 - 44485281
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgcc 236  Q
    |||||||||||||| | | |||||  |||| ||||||||| ||||||  |||||||||||||||| |||       ||||||||||||||| ||||||||    
T  44485182 tacgcagccttaccatgtcttttacacaagtggttgtttccaggactataacccgtgacctttcaatca-----catgacaacaactttactgttgcgcc 44485276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 50760299 - 50760367
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||  |||| ||  ||||||| |||||  |||||||||||||||||||| |||||||    
T  50760299 tacgcagccttacccagttttatacacaagaggctgttttcaggacttgaacccgtgacctctcagtca 50760367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 241
Target Start/End: Original strand, 25554821 - 25554894
Alignment:
Q  163 caagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgccaaggc 241  Q
    |||||||||||||| ||||||| ||| |||| ||||| |||||      ||||||||||||||||| ||||||||||||    
T  25554821 caagaggttgtttccaggacttaaacacgtggccttttagtca-----cgtgacaacaactttaccattgcgccaaggc 25554894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 205
Target Start/End: Complemental strand, 47214562 - 47214528
Alignment:
Q  171 tgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||| ||||||||||||||||||||||||||||    
T  47214562 tgtttccaggacttgaacccgtgacctttcagtca 47214528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 238
Target Start/End: Original strand, 34679292 - 34679388
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgcc 236  Q
    ||||||| |||||||| |||||||  ||||||||||||||||||| | ||||  ||||  |||||||||       |||||| |||||||||||||||||    
T  34679292 tacgcagtcttaccctgttttttacacaagaggttgtttctaggaatggaacatgtgatatttcagtca-----catgacaataactttaccgttgcgcc 34679386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 212 - 241
Target Start/End: Complemental strand, 43207504 - 43207475
Alignment:
Q  212 gtgacaacaactttaccgttgcgccaaggc 241  Q
    ||||||||||||||||||||||||||||||    
T  43207504 gtgacaacaactttaccgttgcgccaaggc 43207475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 4251455 - 4251507
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacc 189  Q
    |||||| ||||||||| |||||||   || |||||||||||||||||||||||    
T  4251455 tacgcatccttaccctgttttttacataaaaggttgtttctaggacttgaacc 4251507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 8197128 - 8197060
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||| ||||||||| | |||||||  |||||||   || | ||||||||||||||||||||||||||||    
T  8197128 tacgtagccttaccatgttttttacacaagaggcaattaccaggacttgaacccgtgacctttcagtca 8197060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 24564429 - 24564365
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttca 201  Q
    |||||| ||||||||| |||||||  |||||||||||||| | |||||||| | | |||||||||    
T  24564429 tacgcacccttaccctgttttttacacaagaggttgtttccaagacttgaatctgcgacctttca 24564365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 213 - 241
Target Start/End: Original strand, 31442521 - 31442549
Alignment:
Q  213 tgacaacaactttaccgttgcgccaaggc 241  Q
    |||||||||||||||||||||||||||||    
T  31442521 tgacaacaactttaccgttgcgccaaggc 31442549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 39215032 - 39215100
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||  |||||||  |||||||||||||| || ||||||||  | ||||||| |||||    
T  39215032 tacgcagccttacccagttttttacacaagaggttgtttccagtacttgaacttgggaccttttagtca 39215100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 203
Target Start/End: Complemental strand, 43768209 - 43768177
Alignment:
Q  171 tgtttctaggacttgaacccgtgacctttcagt 203  Q
    |||||| ||||||||||||||||||||||||||    
T  43768209 tgtttccaggacttgaacccgtgacctttcagt 43768177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 201
Target Start/End: Original strand, 45264477 - 45264537
Alignment:
Q  141 cagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttca 201  Q
    ||||||||| || ||||||   |||||||||||||| |||||||||||  |||||||||||    
T  45264477 cagccttactctgttttttgcacaagaggttgtttccaggacttgaacatgtgacctttca 45264537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 1e-19; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 137 - 241
Target Start/End: Original strand, 99338 - 99435
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgcc 236  Q
    ||||||||||| || | |||||||  ||||||| |||||||||||||||||||||||||||||||||||      |||||||||||||||| ||||||||    
T  99338 tacgcagccttgccatgtttttta--caagaggctgtttctaggacttgaacccgtgacctttcagtca-----cgtgacaacaactttactgttgcgcc 99430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 232
Target Start/End: Original strand, 29419970 - 29420052
Alignment:
Q  145 cttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttg 232  Q
    |||||||| |||||||  |||||||||||||| ||||||||||| ||||||||||||||||     ||||||||||||||||||||||    
T  29419970 cttaccctgttttttacacaagaggttgtttccaggacttgaactcgtgacctttcagtca-----tgtgacaacaactttaccgttg 29420052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 137 - 231
Target Start/End: Complemental strand, 33795347 - 33795258
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgtt 231  Q
    |||||||||||||||| |||||||  ||||||||||||||  ||||||||||||||||||||||| |||      ||||||||||||||||||||    
T  33795347 tacgcagccttaccctgttttttacccaagaggttgtttccgggacttgaacccgtgacctttcaatca-----cgtgacaacaactttaccgtt 33795258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 17896322 - 17896253
Alignment:
Q  137 tacgcagccttaccctatttttt-aggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||||||||||||||||||| |  ||||||||||||||||||||||||| |||||||||||| ||||    
T  17896322 tacgcagccttaccctatttttttacacaagaggttgtttctaggacttgaatccgtgacctttcggtca 17896253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 5841090 - 5841022
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||| |||||||||||||||||  ||| ||| |||||||||||||||||||||||||||| ||||||    
T  5841090 tacgcatccttaccctattttttacacaaaaggctgtttctaggacttgaacccgtgaccttccagtca 5841022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 10543760 - 10543692
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| |||||||  |||||||  ||||| ||||||||||||||||||||||||||||    
T  10543760 tacgcagccttaccctgttttttacacaagaggccgtttccaggacttgaacccgtgacctttcagtca 10543692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 14530380 - 14530312
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||| ||||||||||| |||||||  ||||||| |||||| ||||||||||||||||||||||||||||    
T  14530380 tacgtagccttaccctgttttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtca 14530312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 19615054 - 19614986
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||| |||||||| |||||||  ||||||| |||||| ||||||||||||||||||||||||||||    
T  19615054 tacgcagtcttaccctgttttttatacaagaggatgtttcaaggacttgaacccgtgacctttcagtca 19614986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 24200698 - 24200766
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| |||||||  ||||||| |||||| |||||||||||||||||| |||||||||    
T  24200698 tacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacttttcagtca 24200766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 204
Target Start/End: Complemental strand, 17623626 - 17623559
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtc 204  Q
    ||||||||||||||||  ||||||  |||||||||||||| ||||||||||||||||||||| |||||    
T  17623626 tacgcagccttaccctgatttttacacaagaggttgtttcgaggacttgaacccgtgaccttccagtc 17623559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 10546225 - 10546156
Alignment:
Q  137 tacgcagccttaccctatttttt-aggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| |||||| |  ||||||| |||||| ||||||||||||||||||||||||||||    
T  10546225 tacgcagccttaccctgtttttttatacaagaggatgtttccaggacttgaacccgtgacctttcagtca 10546156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 241
Target Start/End: Original strand, 4516424 - 4516523
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgcc 236  Q
    |||||||| || |||| |||||||  ||||||| ||||||||| |||||||   |||||||||||||||      |||||||||||||||||||||||||    
T  4516424 tacgcagcgttgccctgttttttacacaagaggctgtttctagaacttgaatatgtgacctttcagtca-----cgtgacaacaactttaccgttgcgcc 4516518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 8455389 - 8455457
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| | |||||  ||||||| |||||| ||||||||||||||||||||| ||||||    
T  8455389 tacgcagccttaccctgtgttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtca 8455457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 12023992 - 12024059
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| ||||| |  ||||||| |||||| ||||||||||||||||||||||||||||    
T  12023992 tacgcagccttaccctgttttt-acacaagaggctgtttccaggacttgaacccgtgacctttcagtca 12024059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 17668064 - 17667996
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||||||||||||  ||||||  ||||||||| |||| ||||||||||||||||||||| ||||||    
T  17668064 tacgcagccttaccctgatttttacacaagaggttctttccaggacttgaacccgtgaccttccagtca 17667996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 239
Target Start/End: Original strand, 21377150 - 21377243
Alignment:
Q  141 cagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgccaag 239  Q
    |||||||||||| |||||||  ||||||| |||||||| ||||||||| ||| ||||||||||||       ||||||||||||||||||||| |||||    
T  21377150 cagccttaccctgttttttacacaagaggatgtttctatgacttgaactcgtaacctttcagtca-----catgacaacaactttaccgttgctccaag 21377243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 209
Target Start/End: Original strand, 2003609 - 2003682
Alignment:
Q  137 tacgcagccttaccctatttttt-aggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtg 209  Q
    |||||| ||||||||| |||||| | ||||| || |||||| |||||||| |||||||||||||||||||||||    
T  2003609 tacgcatccttaccctgtttttttacgcaaggggctgtttccaggacttgtacccgtgacctttcagtcatgtg 2003682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 5450348 - 5450279
Alignment:
Q  137 tacgcagccttaccctatttttt-aggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||| | |||||| |  |||||||||||||| |||| |||||||||||||||||||||||    
T  5450348 tacgcagccttaccatgtttttttacacaagaggttgtttccaggaattgaacccgtgacctttcagtca 5450279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 40416948 - 40417012
Alignment:
Q  141 cagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||| |||| |||||||  |||||||||||||| | ||||||||||||||||||| ||||||    
T  40416948 cagcctttccctgttttttatacaagaggttgtttccatgacttgaacccgtgaccttccagtca 40417012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 205
Target Start/End: Original strand, 25079808 - 25079859
Alignment:
Q  154 ttttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||  |||||||||||||||| ||||||||||||||||||| ||||||    
T  25079808 ttttttacacaagaggttgtttctaagacttgaacccgtgaccttccagtca 25079859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 23397826 - 23397760
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||| ||||||||||||||||  |  ||||||| |||||| ||||||||||||| ||||||||||||||    
T  23397826 tacgtagccttaccctattttaca--caagaggctgtttccaggacttgaacccatgacctttcagtca 23397760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 202
Target Start/End: Original strand, 32781361 - 32781426
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcag 202  Q
    ||||||| |||||||| |||||||  ||||||||||||||   ||||||||| |||||||||||||    
T  32781361 tacgcagtcttaccctgttttttacacaagaggttgtttccgagacttgaactcgtgacctttcag 32781426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 241
Target Start/End: Original strand, 44521449 - 44521545
Alignment:
Q  140 gcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgccaag 239  Q
    ||||||||||| | |||||||  |||||| ||||||| | || |||||| ||||||||||||||||      |||| ||||||||||||||| |||||||    
T  44521449 gcagccttaccttgttttttacacaagagattgtttccaagatttgaacgcgtgacctttcagtca-----cgtgataacaactttaccgttccgccaag 44521543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 7214596 - 7214528
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| | |||||  ||||||  |||||| | ||||||||||| ||||||||||||||    
T  7214596 tacgcagccttaccctgtattttacacaagagactgtttccaagacttgaacccatgacctttcagtca 7214528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 11514498 - 11514430
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||  | |||||||  ||||||| |||||| |||| |||||||||||||||| ||||||    
T  11514498 tacgcagccttactttgttttttacacaagaggctgtttccaggagttgaacccgtgaccttccagtca 11514430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 14444786 - 14444723
Alignment:
Q  141 cagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||| ||||| |  ||||||| |||||| ||||||||||||||||||||| ||||||    
T  14444786 cagccttaccctgttttt-acacaagaggctgtttccaggacttgaacccgtgaccttccagtca 14444723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 19977787 - 19977855
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||| ||||| |||||||||||   |||||| |||||| || |||||||||||||||||||| ||||    
T  19977787 tacgcaaccttatcctattttttacaaaagaggctgtttccagaacttgaacccgtgacctttcggtca 19977855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 23145771 - 23145839
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||||||||| || |||||||  ||||||  |||||  | ||||||||||||||||||||||||||    
T  23145771 tacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttcagtca 23145839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 23557561 - 23557629
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||||||||| || |||||||  ||||||  |||||  | ||||||||||||||||||||||||||    
T  23557561 tacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttcagtca 23557629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 205
Target Start/End: Original strand, 17380335 - 17380377
Alignment:
Q  163 caagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||| | ||||||||||||||||||||| ||||    
T  17380335 caagaggttgtttccaagacttgaacccgtgacctttcggtca 17380377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 205
Target Start/End: Original strand, 21779358 - 21779400
Alignment:
Q  163 caagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||| ||| || ||||||||||||||||||||||||||||    
T  21779358 caagaggctgtctccaggacttgaacccgtgacctttcagtca 21779400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 205
Target Start/End: Complemental strand, 25641530 - 25641496
Alignment:
Q  171 tgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||| ||||||||||||||||||||||||||||    
T  25641530 tgtttccaggacttgaacccgtgacctttcagtca 25641496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 203
Target Start/End: Original strand, 44449457 - 44449522
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagt 203  Q
    |||||||||||| ||| ||||| |  ||||||||||||| ||||| |||||| ||||||||||||||    
T  44449457 tacgcagccttatcctgtttttcattcaagaggttgtttttagga-ttgaactcgtgacctttcagt 44449522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 205
Target Start/End: Complemental strand, 44604890 - 44604848
Alignment:
Q  163 caagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||| |||||||||||| |||||||| ||||||    
T  44604890 caagaggttgtttccaggacttgaacctgtgaccttccagtca 44604848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 242
Target Start/End: Complemental strand, 44643585 - 44643484
Alignment:
Q  137 tacgcagccttaccctatttttt-aggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgc 235  Q
    ||||||||||||| || |||||| | | |||||| | ||||||| |||||||| ||||||||||||||||  || ||     ||||||||||| ||||||    
T  44643585 tacgcagccttactctgtttttttacggaagaggctctttctagaacttgaacacgtgacctttcagtcacatgatg-----acaactttaccattgcgc 44643491  T
Q  236 caaggca 242  Q
    |||||||    
T  44643490 caaggca 44643484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 31158522 - 31158582
Alignment:
Q  145 cttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||| ||||||| |||||||| |||||  | ||||| ||||| ||||||||||||||    
T  31158522 cttaccctgttttttacgcaagaggctgttttgaagactttaacccttgacctttcagtca 31158582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 213 - 241
Target Start/End: Complemental strand, 35017808 - 35017780
Alignment:
Q  213 tgacaacaactttaccgttgcgccaaggc 241  Q
    |||||||||||||||||||||||||||||    
T  35017808 tgacaacaactttaccgttgcgccaaggc 35017780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 205
Target Start/End: Original strand, 45235895 - 45235959
Alignment:
Q  142 agccttaccctatt-ttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||| |||||   |||||  |||||||||||||||||| ||||| ||||||||||    
T  45235895 agccttaccctattattttacagaagagactgtttctaggacttgaactcgtgatctttcagtca 45235959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 4e-19; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 19027910 - 19027842
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| |||||||  ||||| |||||||| ||||||||||||||||||||||||||||    
T  19027910 tacgcagccttaccctgttttttacacaagatgttgtttccaggacttgaacccgtgacctttcagtca 19027842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 137 - 200
Target Start/End: Complemental strand, 47444019 - 47443956
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttc 200  Q
    |||||||||||||||| ||||||| |||||||| |||||| |||||||||||||||||||||||    
T  47444019 tacgcagccttaccctgttttttacgcaagaggctgtttccaggacttgaacccgtgacctttc 47443956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 50856344 - 50856408
Alignment:
Q  172 gtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgccaaggc 241  Q
    |||||||||||||||||||||||||||||| |||     |||||||||||||||||||||||||||||||    
T  50856344 gtttctaggacttgaacccgtgacctttcaatca-----tgtgacaacaactttaccgttgcgccaaggc 50856408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 21647026 - 21646958
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||||||||||||||||||||  ||||||| |||||| |||||||||||| |||||||| ||||||    
T  21647026 tacgcagccttaccctattttttacacaagaggctgtttccaggacttgaacctgtgaccttccagtca 21646958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 14590897 - 14590831
Alignment:
Q  140 gcagccttaccctatttttt-aggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||||||||| |||||| || ||||||| ||||||||||||||||| |||||||||||||||||    
T  14590897 gcagccttaccctgtttttttagacaagaggctgtttctaggacttgaatccgtgacctttcagtca 14590831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 241
Target Start/End: Original strand, 487208 - 487307
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgcc 236  Q
    |||||||| ||||| | |||| ||  |||||||||||||| | ||||||||||||||||||||||||||       ||||||||||||||||||| ||||    
T  487208 tacgcagctttaccttgttttatacacaagaggttgtttccaagacttgaacccgtgacctttcagtca-----catgacaacaactttaccgttacgcc 487302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 16408676 - 16408744
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||| |||||||| |||||||  ||||||| |||||| ||||||||||||||||||||| ||||||    
T  16408676 tacgcagtcttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtca 16408744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 16911624 - 16911556
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||||||||||||  ||| ||  ||||||| ||||||||||||||||||||||||||||| |||||    
T  16911624 tacgcagccttaccctgatttgtacacaagaggctgtttctaggacttgaacccgtgacctttaagtca 16911556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 17043467 - 17043535
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| | |||||  ||||||| |||||| |||||||||||| |||||||||||||||    
T  17043467 tacgcagccttaccctgtattttacacaagaggctgtttccaggacttgaacctgtgacctttcagtca 17043535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 25463184 - 25463116
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||| |||| |||  |||||||  |||||||||||||| ||||||||||||||||||||||||||||    
T  25463184 tacgcaacctttcccagttttttacacaagaggttgtttccaggacttgaacccgtgacctttcagtca 25463116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 37494906 - 37494846
Alignment:
Q  144 ccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtc 204  Q
    ||||||||| |||||||  |||||||||||||| |||||||||||| ||||||||||||||    
T  37494906 ccttaccctgttttttacacaagaggttgtttccaggacttgaacctgtgacctttcagtc 37494846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 41018867 - 41018934
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||| |||||||||||| |||| |  |||||||||||||| ||||||||||||||||||||||||||||    
T  41018867 tacgtagccttaccctaatttt-acacaagaggttgtttccaggacttgaacccgtgacctttcagtca 41018934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 139 - 238
Target Start/End: Original strand, 42164224 - 42164317
Alignment:
Q  139 cgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgccaa 238  Q
    |||||||||||||| ||||| |  |||||||||||||| | ||||||||||||||||||||||||||       ||||||||| ||||||||||||||||    
T  42164224 cgcagccttaccctgttttt-acacaagaggttgtttccaagacttgaacccgtgacctttcagtca-----catgacaacaattttaccgttgcgccaa 42164317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 199
Target Start/End: Complemental strand, 54730312 - 54730249
Alignment:
Q  137 tacgcagccttaccctatttttt-aggcaagaggttgtttctaggacttgaacccgtgaccttt 199  Q
    |||||||||||| |||||||||| |  ||||||| |||||||||||||||||||||||||||||    
T  54730312 tacgcagccttatcctatttttttacacaagaggctgtttctaggacttgaacccgtgaccttt 54730249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 241
Target Start/End: Complemental strand, 41549418 - 41549345
Alignment:
Q  163 caagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgccaaggc 241  Q
    |||||||||||||| || ||||||||||||||| ||||| ||||||||     ||||||||||||| ||||||||||||    
T  41549418 caagaggttgtttccagaacttgaacccgtgacatttcaatcatgtgt-----caacaactttacctttgcgccaaggc 41549345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 205
Target Start/End: Original strand, 7385556 - 7385617
Alignment:
Q  144 ccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||||  || |||| |||||| ||| ||||||||||||||||||||||||    
T  7385556 ccttaccctattttttacacatgaggctgtttccagggcttgaacccgtgacctttcagtca 7385617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 20225044 - 20224978
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| ||||  |  |||||||||||||| ||||||||||||| ||||||||||||||    
T  20225044 tacgcagccttaccctgttttaca--caagaggttgtttccaggacttgaacccatgacctttcagtca 20224978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 43035307 - 43035242
Alignment:
Q  140 gcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||||||| | ||| |||  ||||||||||||||  |||||||||||||||||||||||||||    
T  43035307 gcagccttaccgtgtttcttacacaagaggttgtttcctggacttgaacccgtgacctttcagtca 43035242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 47441607 - 47441699
Alignment:
Q  141 cagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgccaa 238  Q
    ||||||||||||  ||||||   |||||  ||||||| ||||||||||| |||||||||||||||      |||||||||||||||||||||||||||    
T  47441607 cagccttaccctgatttttacaaaagagactgtttcttggacttgaacctgtgacctttcagtca-----cgtgacaacaactttaccgttgcgccaa 47441699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 48598898 - 48598964
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| ||||  |  ||||||| |||||| ||||||||||||||||||||||||||||    
T  48598898 tacgcagccttaccctgttttaca--caagaggctgtttccaggacttgaacccgtgacctttcagtca 48598964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 5648320 - 5648253
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| ||||| |  ||||||| |||||| ||||||||||||||||||||| ||||||    
T  5648320 tacgcagccttaccctgttttt-acacaagaggctgtttccaggacttgaacccgtgaccttacagtca 5648253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 6430699 - 6430766
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| ||||| |  ||||||| |||||| | ||||||||||||||||||||||||||    
T  6430699 tacgcagccttaccctgttttt-acacaagaggctgtttccatgacttgaacccgtgacctttcagtca 6430766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 23580281 - 23580349
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||| ||| |||| |||||||  ||||||| | ||||||| |||||||||||||||||||||||||    
T  23580281 tacgcagtcttcccctgttttttacacaagaggctctttctagaacttgaacccgtgacctttcagtca 23580349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 240
Target Start/End: Complemental strand, 54967076 - 54966985
Alignment:
Q  144 ccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgccaagg 240  Q
    ||||||||| |||||||  ||||||||| |||| || ||||||||  |||||||||||||||       ||||||||||||||||||||||||||||    
T  54967076 ccttaccctgttttttacacaagaggttctttccagaacttgaacatgtgacctttcagtca-----catgacaacaactttaccgttgcgccaagg 54966985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 241
Target Start/End: Original strand, 30581557 - 30581639
Alignment:
Q  154 ttttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgccaaggc 241  Q
    |||||||  |||||||||||||| | ||||||||||| |||||||| |     ||| |||||||||||||||| ||||||||||||||    
T  30581557 ttttttacacaagaggttgtttccacgacttgaacccttgacctttta-----gtgatgtgacaacaactttagcgttgcgccaaggc 30581639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 241
Target Start/End: Original strand, 54640429 - 54640511
Alignment:
Q  154 ttttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgccaaggc 241  Q
    |||||||  ||||||| |||||| | ||||||||||||||||||||||| ||      |||||||||| |||||||||||||||||||    
T  54640429 ttttttacacaagaggctgtttccaagacttgaacccgtgacctttcagcca-----cgtgacaacaattttaccgttgcgccaaggc 54640511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 205
Target Start/End: Original strand, 5306762 - 5306804
Alignment:
Q  163 caagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||| |||||| ||||||||||||||||||||||||||||    
T  5306762 caagaggctgtttccaggacttgaacccgtgacctttcagtca 5306804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 12257700 - 12257765
Alignment:
Q  171 tgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgccaaggc 241  Q
    ||||||||||| ||||||||||||||||||| |||      ||||||||||||||||||||||| ||||||    
T  12257700 tgtttctaggatttgaacccgtgacctttcaatca-----cgtgacaacaactttaccgttgcgtcaaggc 12257765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 205
Target Start/End: Original strand, 17315397 - 17315439
Alignment:
Q  163 caagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||| |||| |||||||||||||||||||||||    
T  17315397 caagaggttgtttcgaggaattgaacccgtgacctttcagtca 17315439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 25343249 - 25343152
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgcc 236  Q
    |||||||||||||||| |||||||  ||||||  | |||| || ||||||||| ||||||| |||||||      ||||||||||||||||| |||||||    
T  25343249 tacgcagccttaccctgttttttacacaagagactatttccagaacttgaacctgtgacctatcagtca-----cgtgacaacaactttaccattgcgcc 25343155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 9832386 - 9832452
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| ||||  |  ||||||| |||||  ||||||||||||||||||||||||||||    
T  9832386 tacgcagccttaccctgttttaca--caagaggctgttttcaggacttgaacccgtgacctttcagtca 9832452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 10660463 - 10660398
Alignment:
Q  140 gcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||| ||||||||||||||   ||||||||||||| |||||||||||  || ||||||||||||    
T  10660463 gcagccataccctattttttacataagaggttgtttccaggacttgaacatgtaacctttcagtca 10660398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 10874608 - 10874543
Alignment:
Q  140 gcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||| ||||||||||||||   ||||||||||||| |||||||||||  || ||||||||||||    
T  10874608 gcagccataccctattttttacataagaggttgtttccaggacttgaacatgtaacctttcagtca 10874543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 30690271 - 30690324
Alignment:
Q  152 tattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||  ||||||| | |||| ||||||||||||||||||||||||||||    
T  30690271 tattttttacacaagaggctttttccaggacttgaacccgtgacctttcagtca 30690324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 47528603 - 47528669
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| ||||  |  ||||||| |||||| |||||||||||| |||||||||||||||    
T  47528603 tacgcagccttaccctgttttaca--caagaggctgtttccaggacttgaacctgtgacctttcagtca 47528669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 7038106 - 7038047
Alignment:
Q  145 cttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||||||||||||  ||||| | |||||| |||||||||||| |||||||||||||||    
T  7038106 cttaccctattttttacacaagaagctgtttc-aggacttgaacctgtgacctttcagtca 7038047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 30639441 - 30639374
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| ||||| |  ||||||  |||||| |||||||||||| |||||||||||||||    
T  30639441 tacgcagccttaccctgttttt-acacaagagtctgtttccaggacttgaaccagtgacctttcagtca 30639374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 241
Target Start/End: Complemental strand, 36589801 - 36589707
Alignment:
Q  141 cagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgccaagg 240  Q
    |||| ||||| | |||||||  ||||||| |||||| |||||||||||| | ||| |||||||||||||     ||| ||||||||||||||||||||||    
T  36589801 cagcattaccatgttttttacacaagaggctgtttccaggacttgaacctg-gacgtttcagtcatgtg-----acatcaactttaccgttgcgccaagg 36589708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 44363205 - 44363273
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||||| |||||| |||||||  || |||| |||||  ||||||||||| ||||||||||||||||    
T  44363205 tacgcagccctaccctgttttttacacacgaggctgttttcaggacttgaactcgtgacctttcagtca 44363273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 187
Target Start/End: Original strand, 9987910 - 9987957
Alignment:
Q  140 gcagccttaccctattttttaggcaagaggttgtttctaggacttgaa 187  Q
    |||||||||||||||| ||||  |||||||||||||| ||||||||||    
T  9987910 gcagccttaccctattgtttacacaagaggttgtttccaggacttgaa 9987957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 237
Target Start/End: Original strand, 49938689 - 49938759
Alignment:
Q  163 caagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaac-tttaccgttgcgcca 237  Q
    ||||||| |||||| |||||||||||| |||||||||||||||      ||||||||||| |||||||||||||||    
T  49938689 caagaggctgtttccaggacttgaacctgtgacctttcagtca-----cgtgacaacaacttttaccgttgcgcca 49938759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 205
Target Start/End: Original strand, 10380041 - 10380083
Alignment:
Q  163 caagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||||||||| ||||||||||||  |||||||||||||||    
T  10380041 caagaggttgtttgtaggacttgaacaagtgacctttcagtca 10380083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 14983889 - 14983835
Alignment:
Q  144 ccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctt 198  Q
    |||||||||||||||||  ||||||| |||||| | |||||||| ||||||||||    
T  14983889 ccttaccctattttttacacaagaggctgtttcaaagacttgaatccgtgacctt 14983835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 205
Target Start/End: Original strand, 32629367 - 32629409
Alignment:
Q  163 caagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||| |||||| |||| |||||||||||||||||||||||    
T  32629367 caagaggctgtttcgaggatttgaacccgtgacctttcagtca 32629409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 203
Target Start/End: Complemental strand, 35567228 - 35567166
Alignment:
Q  141 cagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagt 203  Q
    |||||||||||| |||||||  |||| || |||||| | ||||||||||| ||||||||||||    
T  35567228 cagccttaccctgttttttacacaagtggctgtttccaagacttgaacccatgacctttcagt 35567166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 201
Target Start/End: Original strand, 39077893 - 39077931
Alignment:
Q  163 caagaggttgtttctaggacttgaacccgtgacctttca 201  Q
    ||||||| |||||| ||||||||||||||||||||||||    
T  39077893 caagaggctgtttccaggacttgaacccgtgacctttca 39077931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 44357274 - 44357216
Alignment:
Q  145 cttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagt 203  Q
    ||||| |||||| |||  ||| |||||||||||||||||||||| | ||||||||||||    
T  44357274 cttactctatttattacacaaaaggttgtttctaggacttgaactcatgacctttcagt 44357216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 29207971 - 29208037
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| ||||  |  |||||||   |||| ||||||||||||||||||||||||||||    
T  29207971 tacgcagccttaccctgttttaca--caagaggcaatttccaggacttgaacccgtgacctttcagtca 29208037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 198
Target Start/End: Complemental strand, 40915890 - 40915830
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctt 198  Q
    |||||||||||||| | ||||| |  ||||||| |||||| |||||||||||||||||||||    
T  40915890 tacgcagccttaccttgttttt-acacaagaggctgtttccaggacttgaacccgtgacctt 40915830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 59039 - 58971
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||| |||||||| |||||||  ||||||| |||||| ||||||||||||||||||||||||||||    
T  59039 tacgcagtcttaccctgttttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtca 58971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 9e-17; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 12221990 - 12222058
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| |||||||  ||||||| |||||| | ||||||||||||||||||||||||||    
T  12221990 tacgcagccttaccctgttttttacacaagaggctgtttccaagacttgaacccgtgacctttcagtca 12222058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 140 - 240
Target Start/End: Original strand, 13905055 - 13905150
Alignment:
Q  140 gcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgccaag 239  Q
    ||||||||||||| |||||||  |||||||| ||||  ||||||||| ||||||||||||||||||       |||||||||||||||||||||||||||    
T  13905055 gcagccttaccctgttttttacacaagaggtcgttttcaggacttgagcccgtgacctttcagtca-----catgacaacaactttaccgttgcgccaag 13905149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 29355930 - 29355998
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| ||| |||  ||||||| |||||| ||||||||||||||||||||||||||||    
T  29355930 tacgcagccttaccctgtttcttacacaagaggctgtttccaggacttgaacccgtgacctttcagtca 29355998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 2166485 - 2166553
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||| ||||| ||| | |||||  |||||||||||||| ||||||||||||||||||||||||||||    
T  2166485 tacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaacccgtgacctttcagtca 2166553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 2178118 - 2178186
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||| ||||| ||| | |||||  |||||||||||||| ||||||||||||||||||||||||||||    
T  2178118 tacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaacccgtgacctttcagtca 2178186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 8409305 - 8409237
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| |||||||  |||||||  ||||| |||||||||| |||||||||||||||||    
T  8409305 tacgcagccttaccctgttttttacacaagaggcagtttccaggacttgaatccgtgacctttcagtca 8409237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 205
Target Start/End: Complemental strand, 17432395 - 17432334
Alignment:
Q  144 ccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||||| |||||||  ||||| |||||||| |||||||||||| |||||||||||||||    
T  17432395 ccttaccctgttttttacacaagatgttgtttccaggacttgaacctgtgacctttcagtca 17432334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 7947445 - 7947513
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||||||||||||  ||||||  || ||||||||||| |||| ||||||| |||||||||||||||    
T  7947445 tacgcagccttaccctggtttttacacaggaggttgtttccaggagttgaaccggtgacctttcagtca 7947513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 204
Target Start/End: Complemental strand, 12063512 - 12063462
Alignment:
Q  154 ttttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtc 204  Q
    |||||||  ||||||| | ||||||||||||||||||||||||||||||||    
T  12063512 ttttttatacaagaggctatttctaggacttgaacccgtgacctttcagtc 12063462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 1347024 - 1346958
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| ||||  |  |||| || |||||| ||||||||||||||||||||||||||||    
T  1347024 tacgcagccttaccctgttttaca--caagtggctgtttccaggacttgaacccgtgacctttcagtca 1346958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 1354830 - 1354896
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| ||||  |  ||||||| |||||| |||||||||||| |||||||||||||||    
T  1354830 tacgcagccttaccctgttttaca--caagaggctgtttccaggacttgaaccagtgacctttcagtca 1354896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 194
Target Start/End: Complemental strand, 33138895 - 33138838
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtga 194  Q
    ||||| ||||||| || |||||||  |||||||||||||| |||||||||||||||||    
T  33138895 tacgcggccttactctgttttttatacaagaggttgtttccaggacttgaacccgtga 33138838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 4136590 - 4136658
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||| ||||||||| | |||||  ||||| ||||||| ||||||||||||||||||| ||| |||||    
T  4136590 tacgcaaccttaccctgtattttacacaagatgttgtttttaggacttgaacccgtgacattttagtca 4136658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 9161184 - 9161117
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||||||||| || ||||| |  ||||||| |||||| |||||||||||| |||||||||||||||    
T  9161184 tacgcagccttactctgttttt-acacaagaggctgtttccaggacttgaacctgtgacctttcagtca 9161117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 20400729 - 20400661
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||| |||||||| |||||||  |||||| ||||||| |  ||||||||| |||||||||||||||    
T  20400729 tacgcagtcttaccctgttttttacacaagagattgtttccataacttgaacctgtgacctttcagtca 20400661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 203
Target Start/End: Complemental strand, 24097640 - 24097577
Alignment:
Q  140 gcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagt 203  Q
    ||||||||||||| |||||||  ||||||| || ||| ||||||| ||| ||||||||||||||    
T  24097640 gcagccttaccctgttttttatacaagaggctggttcgaggacttaaactcgtgacctttcagt 24097577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 14553569 - 14553511
Alignment:
Q  141 cagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgaccttt 199  Q
    ||||||||||||||||||||  ||||| | | |||| |||||||||||| |||||||||    
T  14553569 cagccttaccctattttttacacaagaagctatttccaggacttgaacctgtgaccttt 14553511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 204
Target Start/End: Original strand, 3116222 - 3116263
Alignment:
Q  163 caagaggttgtttctaggacttgaacccgtgacctttcagtc 204  Q
    |||||||||||||| | ||||||||||| |||||||||||||    
T  3116222 caagaggttgtttccatgacttgaacccatgacctttcagtc 3116263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 198
Target Start/End: Complemental strand, 6024295 - 6024234
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctt 198  Q
    ||||||| |||||| | |||||||  ||||||| ||||||||||| ||||| ||||||||||    
T  6024295 tacgcagtcttaccatgttttttacacaagaggctgtttctaggatttgaaaccgtgacctt 6024234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 241
Target Start/End: Complemental strand, 12889485 - 12889389
Alignment:
Q  140 gcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtcatgtgttgtgacaacaactttaccgttgcgccaag 239  Q
    |||||||| |||| ||||| |  ||||||| |||||  | |||||||||| ||||||||||| |||      ||||||||||||||||||||| ||||||    
T  12889485 gcagccttgccctgtttttaacacaagaggctgttttcaagacttgaacctgtgacctttcactca-----cgtgacaacaactttaccgttgtgccaag 12889391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 1941917 - 1941849
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| |||||||  |||||||||||||  | ||||| || ||| |||||| ||||||    
T  1941917 tacgcagccttaccctgttttttacacaagaggttgtttacatgacttcaatccgcgaccttccagtca 1941849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 3815150 - 3815218
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||| | |||| |||||||||  ||| ||  |||||| |||||||||||||||||| |||||||||    
T  3815150 tacgcagtcgtaccatattttttacacaatagtctgtttccaggacttgaacccgtgacatttcagtca 3815218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 17448386 - 17448322
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttca 201  Q
    |||||||||||||||| |||||||  ||| | |||||||  |  |||||||||||||||||||||    
T  17448386 tacgcagccttaccctgttttttacacaaaatgttgttttcaaaacttgaacccgtgacctttca 17448322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 205
Target Start/End: Original strand, 226481 - 226547
Alignment:
Q  140 gcagccttaccctatttttt-aggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||||||||| |||||| || ||||||| ||||||||||||||||| |||||||||||||||||    
T  226481 gcagccttaccctgtttttttagacaagaggctgtttctaggacttgaatccgtgacctttcagtca 226547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 137 - 198
Target Start/End: Complemental strand, 46893 - 46832
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctt 198  Q
    |||||| |||||||||||||||||  |||||||||||||| || ||||||||||||||||||    
T  46893 tacgcaaccttaccctattttttacacaagaggttgtttccagcacttgaacccgtgacctt 46832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 24845 - 24908
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||||| |||||||  ||||||| ||||     ||||||||||| ||||||||||||||    
T  24845 tacgcagccttaccctgttttttacacaagaggctgtt-----gacttgaacccatgacctttcagtca 24908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 4219 - 4151
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||| ||||| ||| | |||||  |||||||||||||| ||||||||||||||||||||||||||||    
T  4219 tacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaacccgtgacctttcagtca 4151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 13097 - 13164
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||| | ||||| | |||||||| |||||| |||||||||||| |||||||||||||||    
T  13097 tacgcagccttaccttgttttt-acgcaagaggctgtttccaggacttgaaccggtgacctttcagtca 13164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 205
Target Start/End: Complemental strand, 11167 - 11125
Alignment:
Q  163 caagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||| |||||| ||||||||||||||||||||||||||||    
T  11167 caagaggctgtttccaggacttgaacccgtgacctttcagtca 11125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 205
Target Start/End: Original strand, 10147 - 10189
Alignment:
Q  163 caagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||| |||||| ||||||||||||||||||||||||||||    
T  10147 caagaggctgtttccaggacttgaacccgtgacctttcagtca 10189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 205
Target Start/End: Original strand, 20475 - 20517
Alignment:
Q  163 caagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||| |||||| ||||||||||||||||||||||||||||    
T  20475 caagaggctgtttccaggacttgaacccgtgacctttcagtca 20517  T

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Target: scaffold0167 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 23661 - 23593
Alignment:
Q  137 tacgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||| ||||| |||||||  |||||||||||||  | |||||||||||||  |||||||||||    
T  23661 tacgcagcctcaccctgttttttacacaagaggttgtttgcaagacttgaacccgtaccctttcagtca 23593  T

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Target: scaffold0311 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 205
Target Start/End: Complemental strand, 10871 - 10804
Alignment:
Q  138 acgcagccttaccctattttttaggcaagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||| |||||| |||||||  |||||||||||||  ||  ||||||||||||||||| ||||||    
T  10871 acgcagccctaccctgttttttacacaagaggttgttttcagaccttgaacccgtgaccttccagtca 10804  T

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Target: scaffold1176 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 205
Target Start/End: Original strand, 1684 - 1726
Alignment:
Q  163 caagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    |||||||||||||  ||||||||||||| ||||||||||||||    
T  1684 caagaggttgttttcaggacttgaacccatgacctttcagtca 1726  T

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Target: scaffold0168 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 205
Target Start/End: Complemental strand, 30615 - 30573
Alignment:
Q  163 caagaggttgtttctaggacttgaacccgtgacctttcagtca 205  Q
    ||||||| |||||| |||||||||||| |||||||||||||||    
T  30615 caagaggctgtttccaggacttgaaccggtgacctttcagtca 30573  T

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Target: scaffold0018 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 72943 - 72999
Alignment:
Q  140 gcagccttaccctattttttaggcaagagg-ttgtttctaggacttgaacccgtgac 195  Q
    ||||||||||| | |||||||  ||||||  ||||||||||||||||||||||||||    
T  72943 gcagccttaccgtgttttttacacaagagacttgtttctaggacttgaacccgtgac 72999  T

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