View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11737A_low_395 (Length: 245)
Name: NF11737A_low_395
Description: NF11737A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11737A_low_395 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 11 - 245
Target Start/End: Original strand, 46008566 - 46008800
Alignment:
| Q |
11 |
atggacatcaccaacacagtgaaaaacagagaacaagaaaaagcgaaagaagattttgttgctcaaatcaaattcaagaaagctcttaaaccattagatg |
110 |
Q |
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| T |
46008566 |
atggacatcaccaacacagtgaaaaacagagaacaagaaaaagtgaaagaagattttgttgctcaaatcaaattcaagaaagctcttaaaccattagatg |
46008665 |
T |
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| Q |
111 |
aatcaaaccaaggaaaagtaccctcaacaaacacatctcattccccaagactcagcagattcaatgataacaaccatacacattcaccaacaactactca |
210 |
Q |
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| T |
46008666 |
aatcaaatcaaggaaaagtaccctcaacaaacacatctcattccccaagactcagcagattcaatgataacaaccataaacattcaccaacaactactcc |
46008765 |
T |
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| Q |
211 |
aatagaccaaaataaacaacaagtactaaaacaat |
245 |
Q |
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| T |
46008766 |
aagagaccaaaatacacatcaagtactaaaacaat |
46008800 |
T |
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