View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11737A_low_414 (Length: 242)
Name: NF11737A_low_414
Description: NF11737A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11737A_low_414 |
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Alignment Details
Target: chr2 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 1329664 - 1329436
Alignment:
| Q |
2 |
gttcctctggtggtggaagggccttgacgtcattcatatcctcttccggttcaggttcgggttcgggttccttggcttcttcatccgaattgttctcttc |
101 |
Q |
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| T |
1329664 |
gttcctctggtggtggaagggccttgactgcattcatatcctcttccggttcaggttcgggttcgggttccttggcttcttcatccgaattgttctcttc |
1329565 |
T |
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| Q |
102 |
ttgaacatcagctttattgctttgtgctagcatgttcttatctttgataaactcttccataacctctaacttctttggtgtgaccttatctatctcaggg |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1329564 |
ttgaacatcagctttattgctttgtgctagcatgttcttatctttgataaactcttccataacctctaacttctttggtgtgaccttatctatctcaggg |
1329465 |
T |
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| Q |
202 |
tactcagaagagcgacaaattccaatatt |
230 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
1329464 |
tactcagaagagcgacaaattccaatatt |
1329436 |
T |
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