View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11737A_low_455 (Length: 237)
Name: NF11737A_low_455
Description: NF11737A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11737A_low_455 |
 | |
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| [»] scaffold0319 (1 HSPs) |
| | |
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| [»] scaffold0022 (1 HSPs) |
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| [»] scaffold0016 (1 HSPs) |
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| [»] scaffold0130 (1 HSPs) |
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| [»] scaffold0108 (1 HSPs) |
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| [»] scaffold0241 (1 HSPs) |
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| [»] scaffold0040 (1 HSPs) |
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| [»] scaffold0001 (1 HSPs) |
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| [»] scaffold0282 (1 HSPs) |
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| [»] scaffold0005 (1 HSPs) |
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| [»] scaffold0064 (1 HSPs) |
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| [»] scaffold0656 (1 HSPs) |
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| [»] scaffold0026 (1 HSPs) |
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| [»] scaffold0023 (2 HSPs) |
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| [»] scaffold0019 (1 HSPs) |
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| [»] scaffold0107 (1 HSPs) |
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| [»] scaffold0013 (4 HSPs) |
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| [»] scaffold0053 (1 HSPs) |
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| [»] scaffold0046 (1 HSPs) |
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| [»] scaffold0362 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 137; Significance: 1e-71; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 16 - 200
Target Start/End: Complemental strand, 1735501 - 1735317
Alignment:
| Q |
16 |
tggacttcatattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctt |
115 |
Q |
| |
|
||||| || ||||||||||||| ||||||||||||||| || ||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||| |
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|
| T |
1735501 |
tggacatcgtattccacaggcaagatggaaaccacattacagactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcgtcttctt |
1735402 |
T |
|
| Q |
116 |
tggaatgatctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctg |
200 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||| |
|
|
| T |
1735401 |
ttgaatgatctttcttcagaattgacaatgggggtgaaattcgttctgttgctggcttcttaaccatctcgaacacagctttctg |
1735317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 16 - 233
Target Start/End: Original strand, 17422845 - 17423062
Alignment:
| Q |
16 |
tggacttcatattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctt |
115 |
Q |
| |
|
||||| || ||||||||||| ||||| ||||||||||||||||||||||| || || || |||||| | |||||||| ||||||||||||||||| |||| |
|
|
| T |
17422845 |
tggacatcgtattccacaggtaggatagaaaccacattgcaaactatgtcgaggctcgggtcagatcccgtgaaattcgaagtcatctcctcatcctctt |
17422944 |
T |
|
| Q |
116 |
tggaatgatctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctacttt |
215 |
Q |
| |
|
||| |||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||| |||| ||| |
|
|
| T |
17422945 |
tgggatgatctttcttcaagattgacaatgggggtgagattctctctgttgctggtttcttaaccatttcgaacacctctttctgcttatcctccgtttt |
17423044 |
T |
|
| Q |
216 |
gtcaatattggtgatgtc |
233 |
Q |
| |
|
||||| |||||||||||| |
|
|
| T |
17423045 |
gtcaacattggtgatgtc |
17423062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 25 - 233
Target Start/End: Original strand, 22348764 - 22348972
Alignment:
| Q |
25 |
tattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggaatgat |
124 |
Q |
| |
|
|||| |||||| ||||| |||||||||||||| || || |||||||| || |||||| | |||||||||||||||| || ||||| ||||||| ||||| |
|
|
| T |
22348764 |
tatttcacaggtaggatcgaaaccacattgcatacgatatcaagactggggtcagatccaatgaaatttgaagtcatttcttcatcctctttgggatgat |
22348863 |
T |
|
| Q |
125 |
ctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatatt |
224 |
Q |
| |
|
||||||| | |||||||||||||||||| |||| |||| |||||||||| |||||||||||||||||| ||||||||||||| | ||||||||| ||| |
|
|
| T |
22348864 |
ctttctttaaaattgacaatgggggtgagattctctctattgctggttttttaaccatttcgaacacaactttctgcttgcctttccctttgtcaacatt |
22348963 |
T |
|
| Q |
225 |
ggtgatgtc |
233 |
Q |
| |
|
||||||||| |
|
|
| T |
22348964 |
ggtgatgtc |
22348972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 134; Significance: 7e-70; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 16 - 233
Target Start/End: Original strand, 14693217 - 14693434
Alignment:
| Q |
16 |
tggacttcatattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctt |
115 |
Q |
| |
|
||||| || ||||||||||||| ||| ||||||||||||||||||||||| || |||| |||||||| |||||||||||||||||||||| ||| |||| |
|
|
| T |
14693217 |
tggacatcgtattccacaggcaagatagaaaccacattgcaaactatgtcgaggtttgggtcagattccgtgaaatttgaagtcatctccttatcctctt |
14693316 |
T |
|
| Q |
116 |
tggaatgatctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctacttt |
215 |
Q |
| |
|
||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||| |||| ||| |
|
|
| T |
14693317 |
tggaatggtctttcttcaagattgacaatgggggtgaaattctctctgttgctggttttttaaccatttcgaacacggctttctgcttgtcctccgtttt |
14693416 |
T |
|
| Q |
216 |
gtcaatattggtgatgtc |
233 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
14693417 |
gtcaatattggtgatgtc |
14693434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 16 - 209
Target Start/End: Complemental strand, 10782360 - 10782167
Alignment:
| Q |
16 |
tggacttcatattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctt |
115 |
Q |
| |
|
||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||| |
|
|
| T |
10782360 |
tggacatcatattccacaggcaaaatggaaaccacattacaaactatgtcaagacttgggtcagattctgtgaaattcgaagtcatttcctcatcttctt |
10782261 |
T |
|
| Q |
116 |
tggaatgatctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctc |
209 |
Q |
| |
|
| | |||||||||| ||||||| ||||||||||| |||||||||||||||||||| ||||||||||| || |||||||||||||||||| |||| |
|
|
| T |
10782260 |
ttggatgatctttcatcagaatcgacaatgggggcgaaattcgctctgttgctggcttcttaaccatctcaaacacagctttctgcttgtcctc |
10782167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 22 - 230
Target Start/End: Complemental strand, 10150985 - 10150777
Alignment:
| Q |
22 |
tcatattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggaat |
121 |
Q |
| |
|
|||||||||||||| || || |||||||||||||| |||||||||||||| || |||||| | ||||||||||||||||| || ||||| ||||||| || |
|
|
| T |
10150985 |
tcatattccacaggtagtatagaaaccacattgcatactatgtcaagactggggtcagatccagtgaaatttgaagtcatttcttcatcctctttgggat |
10150886 |
T |
|
| Q |
122 |
gatctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaat |
221 |
Q |
| |
|
|||||||||||| |||||||||||||||||| |||| |||||| ||||||| |||||||||||||||||| |||| ||||||||||| ||||||||| |
|
|
| T |
10150885 |
gatctttcttcaaaattgacaatgggggtgagattctctctgtgactggttttttaaccatttcgaacacatcttttcgcttgccctctcctttgtcaac |
10150786 |
T |
|
| Q |
222 |
attggtgat |
230 |
Q |
| |
|
||||||||| |
|
|
| T |
10150785 |
attggtgat |
10150777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 16 - 221
Target Start/End: Original strand, 7401977 - 7402182
Alignment:
| Q |
16 |
tggacttcatattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctt |
115 |
Q |
| |
|
||||| || |||||| |||||||||| ||||||||||||||||||||||| ||||| || ||| |||| |||||||||||||||||||||||||| |||| |
|
|
| T |
7401977 |
tggacatcgtattcctcaggcaggattgaaaccacattgcaaactatgtcgagactcgggtcacattccgtgaaatttgaagtcatctcctcatcctctt |
7402076 |
T |
|
| Q |
116 |
tggaatgatctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctacttt |
215 |
Q |
| |
|
||||| || ||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| || |||| | ||| |
|
|
| T |
7402077 |
tggaacaatacttcttcaaaattgacaatgggggtgaaattctttctgttgctgccttcttaaccatttcgaacacagctttctgtttatcctccatttt |
7402176 |
T |
|
| Q |
216 |
gtcaat |
221 |
Q |
| |
|
|||||| |
|
|
| T |
7402177 |
gtcaat |
7402182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 25 - 203
Target Start/End: Original strand, 13306876 - 13307054
Alignment:
| Q |
25 |
tattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggaatgat |
124 |
Q |
| |
|
|||||||| || ||||| |||||||||||||||||||| || ||||| || |||||| | |||||||| |||||||| || ||||| ||||||| ||||| |
|
|
| T |
13306876 |
tattccaccggtaggatagaaaccacattgcaaactatatcgagactagggtcagatcccgtgaaattcgaagtcatatcttcatcctctttgggatgat |
13306975 |
T |
|
| Q |
125 |
ctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgctt |
203 |
Q |
| |
|
||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
13306976 |
ctttcttcaaaattgacaatgggggtgagattctctctgttgctggtttcttaaccatttcgaacacagttttctgctt |
13307054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 130; Significance: 2e-67; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 68 - 233
Target Start/End: Original strand, 18133578 - 18133743
Alignment:
| Q |
68 |
gacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaattgacaatgggggtgaaattcgctctgttgc |
167 |
Q |
| |
|
||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18133578 |
gacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaacgatctttcttcagaattgacaatgggggtgaaattcgctctgttgc |
18133677 |
T |
|
| Q |
168 |
tggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatattggtgatgtc |
233 |
Q |
| |
|
||||||||||||||| ||||||||| |||| ||||||||||| ||||||||||||||||||||| |
|
|
| T |
18133678 |
tggtttcttaaccatctcgaacacaactttttgcttgccctcccttttgtcaatattggtgatgtc |
18133743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 16 - 203
Target Start/End: Original strand, 14342647 - 14342834
Alignment:
| Q |
16 |
tggacttcatattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctt |
115 |
Q |
| |
|
||||| || ||||||||||||||||| ||||||||||||||||||||||| || || || |||||||| |||||||||||||||||||||||||| |||| |
|
|
| T |
14342647 |
tggacatcgtattccacaggcaggattgaaaccacattgcaaactatgtcgaggctcgggtcagattccgtgaaatttgaagtcatctcctcatcctctt |
14342746 |
T |
|
| Q |
116 |
tggaatgatctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgctt |
203 |
Q |
| |
|
||||| ||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14342747 |
tggaacaatctttcttcaaaattgacaatgggggtgaaattctttttgttgctggtttcttaaccatttcgaacacagctttctgctt |
14342834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 37 - 228
Target Start/End: Original strand, 18171646 - 18171837
Alignment:
| Q |
37 |
aggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaa |
136 |
Q |
| |
|
||||| |||||||||||| | |||||||| ||||| || |||||| | |||||||| |||||||| || ||||| || |||| |||||||||||||| | |
|
|
| T |
18171646 |
aggatagaaaccacattgtacactatgtcgagactagggtcagatccagtgaaattcgaagtcatttcttcatcctccttgggatgatctttcttcaaga |
18171745 |
T |
|
| Q |
137 |
ttgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatattggtg |
228 |
Q |
| |
|
||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| ||||||| |
|
|
| T |
18171746 |
ttgacaatgggggcgaaattctttctgttgctggttttttaaccatttcgaacacagctttctgcttaccctctcctttgtcaacattggtg |
18171837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0319 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0319
Description:
Target: scaffold0319; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 25 - 233
Target Start/End: Complemental strand, 9834 - 9626
Alignment:
| Q |
25 |
tattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggaatgat |
124 |
Q |
| |
|
||||||||||| ||||| |||||||||||||| |||||||| ||||| || |||||| | ||||||||||||||||| || ||||| ||||||| ||| | |
|
|
| T |
9834 |
tattccacaggtaggatagaaaccacattgcatactatgtcgagactagggtcagatccagtgaaatttgaagtcatttcttcatcctctttgggatgtt |
9735 |
T |
|
| Q |
125 |
ctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatatt |
224 |
Q |
| |
|
||||||| | |||||||||||||||||| |||| |||||||||||| || ||||||||||||||||||||||||||||| |||||| ||||||||| ||| |
|
|
| T |
9734 |
ctttctttaaaattgacaatgggggtgagattctctctgttgctggctttttaaccatttcgaacacagctttctgcttaccctctcctttgtcaacatt |
9635 |
T |
|
| Q |
225 |
ggtgatgtc |
233 |
Q |
| |
|
||||||||| |
|
|
| T |
9634 |
ggtgatgtc |
9626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0022 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0022
Description:
Target: scaffold0022; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 22 - 233
Target Start/End: Complemental strand, 11558 - 11347
Alignment:
| Q |
22 |
tcatattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggaat |
121 |
Q |
| |
|
|||||||||| ||| ||||| |||||||||||||| ||||||| ||||| || |||||||| ||||||||||||||||| || ||||| ||||||| || |
|
|
| T |
11558 |
tcatattccataggtaggatagaaaccacattgcatactatgttgagactagggtcagattcagtgaaatttgaagtcatttcttcatcctctttgggat |
11459 |
T |
|
| Q |
122 |
gatctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaat |
221 |
Q |
| |
|
|||||||||| | ||||||||||||||| || |||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
11458 |
gatctttctttaaaattgacaatgggggcgagattctctctgttgctggttttttaaccatttcgaacacagctttctgcttaccctctgttttgtcaac |
11359 |
T |
|
| Q |
222 |
attggtgatgtc |
233 |
Q |
| |
|
|||||||||||| |
|
|
| T |
11358 |
attggtgatgtc |
11347 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 116; Significance: 4e-59; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 22 - 233
Target Start/End: Original strand, 13289364 - 13289575
Alignment:
| Q |
22 |
tcatattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggaat |
121 |
Q |
| |
|
|||||||||| ||| ||||| |||||||||||||| |||||||| ||||| || |||||| | |||||||| |||||||| || ||||| ||||||| || |
|
|
| T |
13289364 |
tcatattccaaaggtaggatagaaaccacattgcatactatgtcgagactagggtcagatccagtgaaattcgaagtcatttcttcatcctctttgggat |
13289463 |
T |
|
| Q |
122 |
gatctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaat |
221 |
Q |
| |
|
|||||||||| | ||||||||||||||| || |||| |||||||||||| || ||||||||||||||||||||||||||||| |||||| ||||||||| |
|
|
| T |
13289464 |
gatctttctttaaaattgacaatgggggcgagattctctctgttgctggctttttaaccatttcgaacacagctttctgcttaccctctcctttgtcaac |
13289563 |
T |
|
| Q |
222 |
attggtgatgtc |
233 |
Q |
| |
|
|||||||||||| |
|
|
| T |
13289564 |
attggtgatgtc |
13289575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 25 - 233
Target Start/End: Original strand, 14772567 - 14772775
Alignment:
| Q |
25 |
tattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggaatgat |
124 |
Q |
| |
|
||||||||||| ||||| || ||||||||||| ||||| || ||||| || |||||| | ||||||||||||||||| || ||||| ||||||| ||||| |
|
|
| T |
14772567 |
tattccacaggtaggatcgagaccacattgcatactatatcgagactggggtcagatccagtgaaatttgaagtcatttcttcatcctctttgggatgat |
14772666 |
T |
|
| Q |
125 |
ctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatatt |
224 |
Q |
| |
|
||||||| |||||||||||||||||||| |||| ||||||||||||||| |||||||||||||| |||||| |||| || || | ||||||||| ||| |
|
|
| T |
14772667 |
ctttctttagaattgacaatgggggtgagattctctctgttgctggttttttaaccatttcgaatacagctctctgttttcctttccctttgtcaacatt |
14772766 |
T |
|
| Q |
225 |
ggtgatgtc |
233 |
Q |
| |
|
||||||||| |
|
|
| T |
14772767 |
ggtgatgtc |
14772775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 113; Significance: 2e-57; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 25 - 233
Target Start/End: Original strand, 23200629 - 23200837
Alignment:
| Q |
25 |
tattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggaatgat |
124 |
Q |
| |
|
|||||||| || ||||| |||||||||||||| ||||| || ||||| || |||||| | |||||||| |||||||| || ||||| ||||||| ||||| |
|
|
| T |
23200629 |
tattccaccggtaggatagaaaccacattgcacactatatcgagactagggtcagatcccgtgaaattcgaagtcatttcttcatcctctttgggatgat |
23200728 |
T |
|
| Q |
125 |
ctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatatt |
224 |
Q |
| |
|
||||||||| ||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||| ||| |
|
|
| T |
23200729 |
ctttcttcaaaattgacaatgggggcgagattctctctgttgctggtttcttaaccatttcgaacacagccttctgcttaccctctgttttgtcaacatt |
23200828 |
T |
|
| Q |
225 |
ggtgatgtc |
233 |
Q |
| |
|
||||||||| |
|
|
| T |
23200829 |
ggtgatgtc |
23200837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 25 - 233
Target Start/End: Complemental strand, 22638512 - 22638304
Alignment:
| Q |
25 |
tattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggaatgat |
124 |
Q |
| |
|
|||||||| || ||||| |||||||||||||| |||||||| ||||| || |||||| | |||||||| |||||||| || ||||| ||||||| ||||| |
|
|
| T |
22638512 |
tattccaccggtaggatagaaaccacattgcacactatgtcgagactagggtcagatccagtgaaattcgaagtcatttcttcatcctctttgggatgat |
22638413 |
T |
|
| Q |
125 |
ctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatatt |
224 |
Q |
| |
|
||||||||| ||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||| |||||||| |||||| ||| |||| || |
|
|
| T |
22638412 |
ctttcttcaaaattgacaatgggggcgagattctctctgttgctggtttcttaaccatttcgaacacagccttctgcttaccctctgttttatcaacatc |
22638313 |
T |
|
| Q |
225 |
ggtgatgtc |
233 |
Q |
| |
|
||||||||| |
|
|
| T |
22638312 |
ggtgatgtc |
22638304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 25 - 233
Target Start/End: Original strand, 23626258 - 23626466
Alignment:
| Q |
25 |
tattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggaatgat |
124 |
Q |
| |
|
|||||||| || ||||| |||||||||||||| |||||||| ||||| || |||||| | |||||||| |||||||| || |||| || |||| ||||| |
|
|
| T |
23626258 |
tattccaccggtaggatagaaaccacattgcacactatgtcgagactagggtcagatccagtgaaattcgaagtcatttctacatcctccttgggatgat |
23626357 |
T |
|
| Q |
125 |
ctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatatt |
224 |
Q |
| |
|
|||| |||| |||||||||||||| || |||| |||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||||| ||| |
|
|
| T |
23626358 |
cttttttcaatattgacaatgggggcgagattctctctgttgctggtttcttaaccattttgaacacagctttctgcttaccctctgttttgtcaacatt |
23626457 |
T |
|
| Q |
225 |
ggtgatgtc |
233 |
Q |
| |
|
||||||||| |
|
|
| T |
23626458 |
ggtgatgtc |
23626466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 25 - 233
Target Start/End: Complemental strand, 24912091 - 24911884
Alignment:
| Q |
25 |
tattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggaatgat |
124 |
Q |
| |
|
|||||||||| || || || ||||||||||| |||||||| ||||| || |||||| | ||||||||||||||||| || ||||| ||||||| ||| | |
|
|
| T |
24912091 |
tattccacagatagaattgataccacattgcatactatgtcgagactggggtcagatccagtgaaatttgaagtcatttcttcatcctctttgggatggt |
24911992 |
T |
|
| Q |
125 |
ctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatatt |
224 |
Q |
| |
|
| ||||| | |||||||| ||||||||||||| || |||||||||||| |||||||||||||| |||||| ||||||| || | ||||||||||||| |
|
|
| T |
24911991 |
ccttctttaagattgacaa-gggggtgaaattctctttgttgctggttttttaaccatttcgaaaacagctctctgctttcctttccctttgtcaatatt |
24911893 |
T |
|
| Q |
225 |
ggtgatgtc |
233 |
Q |
| |
|
||||||||| |
|
|
| T |
24911892 |
ggtgatgtc |
24911884 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0016
Description:
Target: scaffold0016; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 25 - 233
Target Start/End: Original strand, 126559 - 126767
Alignment:
| Q |
25 |
tattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggaatgat |
124 |
Q |
| |
|
|||||||| || ||||| |||||||||||||| ||||| || ||||| || |||||| | |||||||| |||||||| || ||||| ||||||| ||||| |
|
|
| T |
126559 |
tattccaccggtaggatagaaaccacattgcacactatatcgagactagggtcagatccagtgaaattcgaagtcatttcttcatcctctttgggatgat |
126658 |
T |
|
| Q |
125 |
ctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatatt |
224 |
Q |
| |
|
||||||||| ||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||| |||||||| |||||| ||| |||| || |
|
|
| T |
126659 |
ctttcttcaaaattgacaatgggggcgagattctctctgttgctggtttcttaaccatttcgaacacagccttctgcttaccctctgttttatcaacatc |
126758 |
T |
|
| Q |
225 |
ggtgatgtc |
233 |
Q |
| |
|
||||||||| |
|
|
| T |
126759 |
ggtgatgtc |
126767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0130 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0130
Description:
Target: scaffold0130; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 37 - 233
Target Start/End: Complemental strand, 43327 - 43131
Alignment:
| Q |
37 |
aggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaa |
136 |
Q |
| |
|
||||| |||||||||||||| |||||||| ||||| || |||||| | |||||||| ||||||| || ||||| || |||| |||||||||||||| || |
|
|
| T |
43327 |
aggatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaaattcgaagtcagttcttcatcctccttgggatgatctttcttcaaaa |
43228 |
T |
|
| Q |
137 |
ttgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatattggtgatgtc |
233 |
Q |
| |
|
||||||||||||| || |||| |||||||||||||||||||||||||| |||||||||||||||||| |||||| ||| |||| |||||||||||| |
|
|
| T |
43227 |
ttgacaatgggggcgagattctctctgttgctggtttcttaaccattttgaacacagctttctgcttaccctctgttttatcaacattggtgatgtc |
43131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0108 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0108
Description:
Target: scaffold0108; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 22 - 233
Target Start/End: Complemental strand, 26405 - 26194
Alignment:
| Q |
22 |
tcatattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggaat |
121 |
Q |
| |
|
|||||||||||||| |||||||| ||||| ||||| |||||||| ||||| || |||||| | |||||||| ||||||||||| ||||| || ||| | |
|
|
| T |
26405 |
tcatattccacaggtaggatggacaccacgttgcatactatgtcgagactagggtcagatccagtgaaattcgaagtcatctcttcatcctccttgagag |
26306 |
T |
|
| Q |
122 |
gatctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaat |
221 |
Q |
| |
|
|||||||||| |||||||||||||||||| |||| |||||||||||| || |||||||||||||||||||||||||| || ||||| ||||||||| |
|
|
| T |
26305 |
agtctttcttcaaaattgacaatgggggtgagattctctctgttgctggctttttaaccatttcgaacacagctttctgtttatcctctcctttgtcaac |
26206 |
T |
|
| Q |
222 |
attggtgatgtc |
233 |
Q |
| |
|
|||||||||||| |
|
|
| T |
26205 |
attggtgatgtc |
26194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 99; Significance: 5e-49; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 43 - 233
Target Start/End: Complemental strand, 23435281 - 23435091
Alignment:
| Q |
43 |
gaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaattgaca |
142 |
Q |
| |
|
|||||||||||||| |||||||| ||||| || |||||| | |||||||| |||||||| || ||||| || |||| |||||||||||||| |||||||| |
|
|
| T |
23435281 |
gaaaccacattgcacactatgtcgagactagggtcagatcccgtgaaattcgaagtcatttcttcatcctccttgggatgatctttcttcaaaattgaca |
23435182 |
T |
|
| Q |
143 |
atgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatattggtgatgtc |
233 |
Q |
| |
|
||||||| || |||| |||| ||||||||||||||||||||||||||||| | |||||||| |||||| |||||||| |||||||||||| |
|
|
| T |
23435181 |
atgggggcgagattctctctattgctggtttcttaaccatttcgaacacaaccttctgcttaccctctgttttgtcaacattggtgatgtc |
23435091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 25 - 233
Target Start/End: Original strand, 19035178 - 19035386
Alignment:
| Q |
25 |
tattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggaatgat |
124 |
Q |
| |
|
||||||||||| ||||| || ||||||||||| | || |||||||| || |||||| | |||||||| |||||||| || ||||| | ||||| || || |
|
|
| T |
19035178 |
tattccacaggtaggatcgagaccacattgcatataatatcaagactggggtcagatccagtgaaattcgaagtcatttcttcatcctttttgggattat |
19035277 |
T |
|
| Q |
125 |
ctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatatt |
224 |
Q |
| |
|
|||||||| |||||||||||| | ||| |||| ||||||||||||||| ||||| |||||||||| |||||| |||||||||||| ||||||||| ||| |
|
|
| T |
19035278 |
ttttcttcaaaattgacaatggagatgagattctctctgttgctggttttttaactatttcgaacatagctttttgcttgccctctcctttgtcaacatt |
19035377 |
T |
|
| Q |
225 |
ggtgatgtc |
233 |
Q |
| |
|
||||||||| |
|
|
| T |
19035378 |
ggtgatgtc |
19035386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0241 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0241
Description:
Target: scaffold0241; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 25 - 233
Target Start/End: Complemental strand, 11668 - 11460
Alignment:
| Q |
25 |
tattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggaatgat |
124 |
Q |
| |
|
||||||||||| ||||| || ||||||||||| || || |||||||| || |||||| | ||||||||||||||||| || ||||| ||||||| ||||| |
|
|
| T |
11668 |
tattccacaggtaggattgagaccacattgcatacgatatcaagactggggtcagatccagtgaaatttgaagtcatttcttcatcctctttgggatgat |
11569 |
T |
|
| Q |
125 |
ctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatatt |
224 |
Q |
| |
|
||||||| | |||||||||||||||||| |||| ||||||||||||||| |||||||||||||| ||||||||||| || || | ||||||| | ||| |
|
|
| T |
11568 |
ctttctttataattgacaatgggggtgagattctctctgttgctggttttttaaccatttcgaatacagctttctgttttcctttccctttgtctacatt |
11469 |
T |
|
| Q |
225 |
ggtgatgtc |
233 |
Q |
| |
|
||||||||| |
|
|
| T |
11468 |
ggtgatgtc |
11460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0040 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0040
Description:
Target: scaffold0040; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 25 - 233
Target Start/End: Complemental strand, 29816 - 29608
Alignment:
| Q |
25 |
tattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggaatgat |
124 |
Q |
| |
|
|||||||| || ||||| |||||||||||||| |||||||| || || || |||||| | ||||||| ||| ||||| || ||||| ||||||| ||||| |
|
|
| T |
29816 |
tattccactggtaggatagaaaccacattgcatactatgtctaggctggggtcagatccggtgaaatctgaggtcatttcttcatcctctttgggatgat |
29717 |
T |
|
| Q |
125 |
ctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatatt |
224 |
Q |
| |
|
||||||||| ||||||||| |||||||| |||| |||| | |||||||| |||||||||||||||||| |||| |||||||||| | |||||||||||| |
|
|
| T |
29716 |
ctttcttcaaaattgacaacgggggtgagattctctctatggctggttttttaaccatttcgaacacatctttttgcttgccctttcttttgtcaatatt |
29617 |
T |
|
| Q |
225 |
ggtgatgtc |
233 |
Q |
| |
|
||||||||| |
|
|
| T |
29616 |
ggtgatgtc |
29608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 97; Significance: 8e-48; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 25 - 233
Target Start/End: Original strand, 22805838 - 22806046
Alignment:
| Q |
25 |
tattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggaatgat |
124 |
Q |
| |
|
||||||||||| ||||| || ||||||||||| ||||| || ||| | || |||||| | ||||||||||||||||| || ||||| ||||||| ||||| |
|
|
| T |
22805838 |
tattccacaggtaggattgagaccacattgcatactatatcgagattggggtcagatccagtgaaatttgaagtcatttcttcatcctctttgggatgat |
22805937 |
T |
|
| Q |
125 |
ctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatatt |
224 |
Q |
| |
|
||||||| |||||||||||||||||||| |||| ||||||||||||||| ||||||||||| || |||||| ||||||| || | ||||||||| ||| |
|
|
| T |
22805938 |
ctttctttagaattgacaatgggggtgagattctctctgttgctggttttttaaccatttcaaatacagctctctgctttcctttccctttgtcaacatt |
22806037 |
T |
|
| Q |
225 |
ggtgatgtc |
233 |
Q |
| |
|
||||||||| |
|
|
| T |
22806038 |
ggtgatgtc |
22806046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 116 - 233
Target Start/End: Original strand, 41380414 - 41380531
Alignment:
| Q |
116 |
tggaatgatctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctacttt |
215 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| | || |
|
|
| T |
41380414 |
tggaatgatctttcttcaaaattgacaatgggggtgaaattcgctctgttgctggcttcttaaccatctcgaacacagctttctgcttgccctccatctt |
41380513 |
T |
|
| Q |
216 |
gtcaatattggtgatgtc |
233 |
Q |
| |
|
|||||| |||||| |||| |
|
|
| T |
41380514 |
gtcaatgttggtggtgtc |
41380531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 25 - 233
Target Start/End: Original strand, 126760 - 126968
Alignment:
| Q |
25 |
tattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggaatgat |
124 |
Q |
| |
|
||||||||||| ||||| || ||||||||||| || || |||||||| || |||||| | ||||||||||||||||| || ||||| || |||| ||||| |
|
|
| T |
126760 |
tattccacaggtaggatcgagaccacattgcatacgatatcaagactggggtcagatcccgtgaaatttgaagtcatttcttcatcctcattgggatgat |
126859 |
T |
|
| Q |
125 |
ctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatatt |
224 |
Q |
| |
|
||||||| | |||| ||||||||||||| |||| |||||||| |||||| ||||||||||||||||| ||||||||||| |||| ||||||||| ||| |
|
|
| T |
126860 |
ctttctttaaaattcacaatgggggtgagattctctctgttgttggttttttaaccatttcgaacaccgctttctgctttcccttccctttgtcaacatt |
126959 |
T |
|
| Q |
225 |
ggtgatgtc |
233 |
Q |
| |
|
|| |||||| |
|
|
| T |
126960 |
ggagatgtc |
126968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0282 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0282
Description:
Target: scaffold0282; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 25 - 233
Target Start/End: Original strand, 5538 - 5746
Alignment:
| Q |
25 |
tattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggaatgat |
124 |
Q |
| |
|
||||||||||| || || || ||||||||||| ||||| || ||||| || |||||| | ||||||||||||||||| || ||||| ||||||| ||||| |
|
|
| T |
5538 |
tattccacaggtagaattgagaccacattgcatactatatcgagactggggtcagatccagtgaaatttgaagtcatttcttcatcctctttgggatgat |
5637 |
T |
|
| Q |
125 |
ctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatatt |
224 |
Q |
| |
|
||||||| |||||||||||||||||||| |||| ||||||||||||||| | ||||||||| || ||| || ||||||| || | ||||||||| ||| |
|
|
| T |
5638 |
ctttctttagaattgacaatgggggtgagattctctctgttgctggtttttaaaccatttcaaatacaactctctgctttcctttccctttgtcaacatt |
5737 |
T |
|
| Q |
225 |
ggtgatgtc |
233 |
Q |
| |
|
||||||||| |
|
|
| T |
5738 |
ggtgatgtc |
5746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0005 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0005
Description:
Target: scaffold0005; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 25 - 233
Target Start/End: Complemental strand, 67163 - 66955
Alignment:
| Q |
25 |
tattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggaatgat |
124 |
Q |
| |
|
||||||||||| ||||| || ||||||||||| ||||| || ||||| || |||||| | ||||||||||||||||| || ||||| ||||||| ||||| |
|
|
| T |
67163 |
tattccacaggtaggattgagaccacattgcatactatatcgagactggggtcagatccagtgaaatttgaagtcatttcttcatcctctttgggatgat |
67064 |
T |
|
| Q |
125 |
ctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatatt |
224 |
Q |
| |
|
||||||| |||||||||||||||||||| |||| ||||||||||||||| | ||||||||| || ||| || |||| || || | ||||||||| ||| |
|
|
| T |
67063 |
ctttctttagaattgacaatgggggtgagattctctctgttgctggtttttaaaccatttcaaatacaactctctgatttcctttccctttgtcaacatt |
66964 |
T |
|
| Q |
225 |
ggtgatgtc |
233 |
Q |
| |
|
||||||||| |
|
|
| T |
66963 |
ggtgatgtc |
66955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0064 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0064
Description:
Target: scaffold0064; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 22 - 230
Target Start/End: Original strand, 37590 - 37798
Alignment:
| Q |
22 |
tcatattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggaat |
121 |
Q |
| |
|
|||||||||||||| ||||| || ||||| || || |||||||| ||||| || |||||| | |||||||| |||||||| || ||||| || |||| | |
|
|
| T |
37590 |
tcatattccacaggtaggatagacaccacgttacatactatgtcgagactagggtcagatccagtgaaattcgaagtcatatcttcatcctccttgggaa |
37689 |
T |
|
| Q |
122 |
gatctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaat |
221 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| || ||||||||| || |||||||||||||||||||||||||| || ||||| ||||| ||| |
|
|
| T |
37690 |
agtctttcttcaaaattgacaatgggggtgaaattctctatgttgctggctttttaaccatttcgaacacagctttctgtttaacctctcctttgacaaa |
37789 |
T |
|
| Q |
222 |
attggtgat |
230 |
Q |
| |
|
||||||||| |
|
|
| T |
37790 |
attggtgat |
37798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 25 - 233
Target Start/End: Complemental strand, 21511184 - 21510976
Alignment:
| Q |
25 |
tattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggaatgat |
124 |
Q |
| |
|
||||||||| | | ||| || ||||||||||| | || |||||||| || |||||| | ||||||||||||||||| || ||||| || |||| ||||| |
|
|
| T |
21511184 |
tattccacaagtaagatcgagaccacattgcatatgatatcaagactggggtcagatccagtgaaatttgaagtcatttcttcatcctccttgggatgat |
21511085 |
T |
|
| Q |
125 |
ctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatatt |
224 |
Q |
| |
|
||||||| | |||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||| ||||||||||| || | ||||||||| ||| |
|
|
| T |
21511084 |
ctttctttaaaattgacaatgggggtgagattctctctgttgctggttttttaaccatttcgaacaccgctttctgctttcctttccctttgtcaacatt |
21510985 |
T |
|
| Q |
225 |
ggtgatgtc |
233 |
Q |
| |
|
|| |||||| |
|
|
| T |
21510984 |
ggagatgtc |
21510976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0656 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0656
Description:
Target: scaffold0656; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 25 - 233
Target Start/End: Complemental strand, 5235 - 5028
Alignment:
| Q |
25 |
tattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggaatgat |
124 |
Q |
| |
|
||||||||||| || || || ||||||||||| |||||||| ||||| | |||||| | |||||||| |||||||| || ||||| || |||| ||| | |
|
|
| T |
5235 |
tattccacaggtagaattgataccacattgcatactatgtcgagactgaggtcagatccagtgaaattcgaagtcatttcttcatcctccttgggatggt |
5136 |
T |
|
| Q |
125 |
ctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatatt |
224 |
Q |
| |
|
||||||| | |||||||| |||||||| |||| |||||||||||| || |||||||||||||| |||||| | ||||| |||| | ||||||||||||| |
|
|
| T |
5135 |
ctttctttaagattgacaaggggggtgagattctctctgttgctggctttttaaccatttcgaaaacagctatttgctt-ccctttcctttgtcaatatt |
5037 |
T |
|
| Q |
225 |
ggtgatgtc |
233 |
Q |
| |
|
||||||||| |
|
|
| T |
5036 |
ggtgatgtc |
5028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0026
Description:
Target: scaffold0026; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 25 - 233
Target Start/End: Original strand, 138973 - 139181
Alignment:
| Q |
25 |
tattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggaatgat |
124 |
Q |
| |
|
||||| ||||| ||||| |||||||||||||| |||||||| ||||| || ||||| | |||||||| |||||||| || ||||| ||||||| ||| | |
|
|
| T |
138973 |
tattctacaggtaggattgaaaccacattgcatactatgtcgagactagggtcagacccagtgaaattcgaagtcatttcttcatcctctttgggatggt |
139072 |
T |
|
| Q |
125 |
ctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatatt |
224 |
Q |
| |
|
||||||| | |||||||| || ||||| || | || |||||||||||| |||||||||||||| |||||| ||||||| || | ||||||||| ||| |
|
|
| T |
139073 |
ctttctttaagattgacaagggaggtgagatcctctttgttgctggttttttaaccatttcgaatacagctctctgctttcctttccctttgtcaacatt |
139172 |
T |
|
| Q |
225 |
ggtgatgtc |
233 |
Q |
| |
|
||||||||| |
|
|
| T |
139173 |
ggtgatgtc |
139181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0023
Description:
Target: scaffold0023; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 95 - 233
Target Start/End: Complemental strand, 65376 - 65238
Alignment:
| Q |
95 |
aagtcatctcctcatcttctttggaatgatctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagc |
194 |
Q |
| |
|
||||||| || ||||| ||||||| |||||||||||| | |||||||||||||||| | |||| ||||||||||||||| |||||||||||||||||| | |
|
|
| T |
65376 |
aagtcatttcttcatcctctttgggatgatctttctttaaaattgacaatgggggttagattctctctgttgctggttttttaaccatttcgaacacaac |
65277 |
T |
|
| Q |
195 |
tttctgcttgccctctactttgtcaatattggtgatgtc |
233 |
Q |
| |
|
||||||||| | | ||||||||| |||||||||||| |
|
|
| T |
65276 |
tttctgctttactttccctttgtcaacattggtgatgtc |
65238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 95 - 233
Target Start/End: Complemental strand, 74554 - 74416
Alignment:
| Q |
95 |
aagtcatctcctcatcttctttggaatgatctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagc |
194 |
Q |
| |
|
||||||| || ||||| ||||||| |||||||||||| | |||||||||||||||| | |||| ||||||||||||||| |||||||||||||||||| | |
|
|
| T |
74554 |
aagtcatttcttcatcctctttgggatgatctttctttaaaattgacaatgggggttagattctctctgttgctggttttttaaccatttcgaacacaac |
74455 |
T |
|
| Q |
195 |
tttctgcttgccctctactttgtcaatattggtgatgtc |
233 |
Q |
| |
|
||||||||| | | ||||||||| |||||||||||| |
|
|
| T |
74454 |
tttctgctttactttccctttgtcaacattggtgatgtc |
74416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0019
Description:
Target: scaffold0019; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 46 - 233
Target Start/End: Original strand, 159086 - 159273
Alignment:
| Q |
46 |
accacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaattgacaatg |
145 |
Q |
| |
|
||||||||||| |||||||| ||||| || |||||| | |||||||| |||||||| || ||||| || |||| ||| | |||||||| ||||| || | |
|
|
| T |
159086 |
accacattgcatactatgtcgagactagggtcagatccagtgaaattcgaagtcatttcttcatcctccttgggatggtttttcttcaagattgataagg |
159185 |
T |
|
| Q |
146 |
ggggtgaaattcgctctgttgctggtttcttaaccatttcgaacacagctttctgcttgccctctactttgtcaatattggtgatgtc |
233 |
Q |
| |
|
| ||||| |||| ||||||||||| || ||||||||||| || || ||||||||||| || | |||||||||||||||||||||| |
|
|
| T |
159186 |
gcggtgagattctttctgttgctggctttttaaccatttcaaaaacggctttctgcttccctttccctttgtcaatattggtgatgtc |
159273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0107 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0107
Description:
Target: scaffold0107; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 85 - 233
Target Start/End: Complemental strand, 1992 - 1844
Alignment:
| Q |
85 |
gtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccattt |
184 |
Q |
| |
|
|||||||| |||||||| || ||||| | |||| ||| |||||||| | |||||||| |||||||| |||| ||||||||||||||| |||||||||| |
|
|
| T |
1992 |
gtgaaattcgaagtcatttcttcatcctacttgggatggtctttctttaagattgacaaggggggtgagattctctctgttgctggttttttaaccattt |
1893 |
T |
|
| Q |
185 |
cgaacacagctttctgcttgccctctactttgtcaatattggtgatgtc |
233 |
Q |
| |
|
|||| |||||| ||||||| || | ||||||||| |||||||||||| |
|
|
| T |
1892 |
cgaaaacagctctctgctttcctttccctttgtcaacattggtgatgtc |
1844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013 (Bit Score: 45; Significance: 9e-17; HSPs: 4)
Name: scaffold0013
Description:
Target: scaffold0013; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 46 - 182
Target Start/End: Complemental strand, 75541 - 75405
Alignment:
| Q |
46 |
accacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaattgacaatg |
145 |
Q |
| |
|
||||||||||| ||||| || ||||||| |||||||||||||||||||| ||||| || ||||| ||||| | ||| |||||||||| |||||| || | |
|
|
| T |
75541 |
accacattgcatactatatcgagacttgagtcagattctgtgaaatttgacgtcatttcttcatcctctttaggatggtctttcttcaaaattgataaag |
75442 |
T |
|
| Q |
146 |
ggggtgaaattcgctctgttgctggtttcttaaccat |
182 |
Q |
| |
|
| || || |||| || || |||||||| |||||||| |
|
|
| T |
75441 |
gaggggagattctttccgtggctggttttttaaccat |
75405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 140
Target Start/End: Complemental strand, 83970 - 83876
Alignment:
| Q |
46 |
accacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaattga |
140 |
Q |
| |
|
||||||||||| ||||| || |||||||| |||||||||||||||||||| ||||| | ||||| ||||| | ||| |||||||||| |||||| |
|
|
| T |
83970 |
accacattgcatactatatcgagacttgggtcagattctgtgaaatttgacgtcattttttcatcctctttagtatggtctttcttcaaaattga |
83876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 140
Target Start/End: Complemental strand, 121642 - 121548
Alignment:
| Q |
46 |
accacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaattga |
140 |
Q |
| |
|
||||||||||| ||||| || |||||||| |||||||||||||||||||| ||||| | ||||| ||||| | ||| |||||||||| |||||| |
|
|
| T |
121642 |
accacattgcatactatatcgagacttgggtcagattctgtgaaatttgacgtcattttttcatcctctttagtatggtctttcttcaaaattga |
121548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 148897 - 148842
Alignment:
| Q |
46 |
accacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcat |
101 |
Q |
| |
|
||||||||||| ||||| || |||||||| ||||||| |||||||||||| ||||| |
|
|
| T |
148897 |
accacattgcatactatatcgagacttgggtcagattttgtgaaatttgacgtcat |
148842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0053 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0053
Description:
Target: scaffold0053; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 140
Target Start/End: Original strand, 42285 - 42379
Alignment:
| Q |
46 |
accacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaattga |
140 |
Q |
| |
|
||||||||||| ||||| || ||||||||||||||||| |||||||| || ||||| || ||||| || || | ||||| |||||||| |||||| |
|
|
| T |
42285 |
accacattgcacactatatcgagacttggatcagattcagtgaaattcgacgtcatttcttcatcctccttaggatgatttttcttcaaaattga |
42379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0046 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0046
Description:
Target: scaffold0046; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 154
Target Start/End: Complemental strand, 33742 - 33613
Alignment:
| Q |
25 |
tattccacaggcaggatggaaaccacattgcaaactatgtcaagacttggatcagattctgtgaaatttgaagtcatctcctcatcttctttggaatgat |
124 |
Q |
| |
|
||||||||||||| | || ||||||||||| |||||||| ||||| || |||||| | ||||||| |||||||| || ||||| ||||||| ||| | |
|
|
| T |
33742 |
tattccacaggcaaaactgacaccacattgcacactatgtcgagactggggtcagatccaatgaaattcgaagtcatttcttcatcctctttgggatggt |
33643 |
T |
|
| Q |
125 |
ctttcttcagaattgacaatgggggtgaaa |
154 |
Q |
| |
|
||||||||| ||||| || || ||||||| |
|
|
| T |
33642 |
ctttcttcaagattgataagggaggtgaaa |
33613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0362 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0362
Description:
Target: scaffold0362; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 196
Target Start/End: Complemental strand, 14574 - 14463
Alignment:
| Q |
85 |
gtgaaatttgaagtcatctcctcatcttctttggaatgatctttcttcagaattgacaatgggggtgaaattcgctctgttgctggtttcttaaccattt |
184 |
Q |
| |
|
|||||||| |||||||| || ||||| || || | ||||||| |||||| |||||| || || || || |||| || || |||||||| |||||||||| |
|
|
| T |
14574 |
gtgaaattcgaagtcatttcttcatcctccttaggatgatctctcttcaaaattgataagggaggggagattctttccgtggctggttttttaaccattt |
14475 |
T |
|
| Q |
185 |
cgaacacagctt |
196 |
Q |
| |
|
|||| ||||||| |
|
|
| T |
14474 |
cgaaaacagctt |
14463 |
T |
|
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