View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11737A_low_498 (Length: 230)
Name: NF11737A_low_498
Description: NF11737A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11737A_low_498 |
 | |
|
| [»] scaffold0197 (1 HSPs) |
| | |
|
| [»] scaffold0028 (1 HSPs) |
| | |
|
| [»] scaffold0188 (1 HSPs) |
| | |
|
| [»] scaffold0355 (1 HSPs) |
| | |
|
| [»] scaffold0842 (1 HSPs) |
| | |
|
| [»] scaffold0006 (1 HSPs) |
| | |
|
| [»] scaffold0184 (1 HSPs) |
| | |
|
| [»] scaffold0078 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0197 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: scaffold0197
Description:
Target: scaffold0197; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 15446 - 15219
Alignment:
| Q |
1 |
accttcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15446 |
accttcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
15347 |
T |
|
| Q |
101 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
15346 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttgtaacat |
15247 |
T |
|
| Q |
201 |
tcaagccttcactaccttcatcaaccct |
228 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
15246 |
tcaagccttcactaccttcatcaaccct |
15219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 224; Significance: 1e-123; HSPs: 7)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 35744340 - 35744567
Alignment:
| Q |
1 |
accttcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35744340 |
accttcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
35744439 |
T |
|
| Q |
101 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
35744440 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttgtaacat |
35744539 |
T |
|
| Q |
201 |
tcaagccttcactaccttcatcaaccct |
228 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
35744540 |
tcaagccttcactaccttcatcaaccct |
35744567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 10685401 - 10685174
Alignment:
| Q |
1 |
accttcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
100 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10685401 |
accttcttcattcgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
10685302 |
T |
|
| Q |
101 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
10685301 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttgtaacat |
10685202 |
T |
|
| Q |
201 |
tcaagccttcactaccttcatcaaccct |
228 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
10685201 |
tcaagccttcactaccttcatcaaccct |
10685174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 26300300 - 26300511
Alignment:
| Q |
1 |
accttcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
100 |
Q |
| |
|
|||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||| |
|
|
| T |
26300300 |
accttcttcacttgaagcctccgcaacttggaccgaaggactaccatcgccccctttatccgaacaatccttcttgaaatgaccttgcttgtgacaaaga |
26300399 |
T |
|
| Q |
101 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
26300400 |
aagcatttatactttgatttgtcaaagcccttggacctcgac------------ttccccttgccttttcctctatgctcattcctccctcttgcaacat |
26300487 |
T |
|
| Q |
201 |
tcaagccttcactaccttcatcaa |
224 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
26300488 |
tcaagccttcactaccttcatcaa |
26300511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 18856412 - 18856269
Alignment:
| Q |
1 |
accttcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18856412 |
accttcttcatttgaagcctccgcaacttggaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
18856313 |
T |
|
| Q |
101 |
aagcatttatactttgatttgtcaaagcccttggacctagactt |
144 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
18856312 |
aagcatttatactttgatttgtcaaagcccttggacctcgactt |
18856269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 18866807 - 18866664
Alignment:
| Q |
1 |
accttcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18866807 |
accttcttcatttgaagcctccgcaacttggaccgaaggactaccatcgccccccttatctggacaatctttcttgaaatgaccttgcttgtgacaaaga |
18866708 |
T |
|
| Q |
101 |
aagcatttatactttgatttgtcaaagcccttggacctagactt |
144 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
18866707 |
aagcatttatactttgatttgtcaaagcccttggacctcgactt |
18866664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 23 - 225
Target Start/End: Complemental strand, 23800633 - 23800430
Alignment:
| Q |
23 |
gcaacttgaaccgaaggactaccatcgcccccctt-atccggacaatctttcttgaaatgaccttgcttgtgacaaagaaagcatttatactttgatttg |
121 |
Q |
| |
|
||||||||||| ||||||||||||| |||| |||| |||| | ||||| |||||||| || |||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
23800633 |
gcaacttgaacggaaggactaccattgccctcctttatccaggcaatccttcttgaagtggccttgcttatgacaaagaaagcatttatactttgatttg |
23800534 |
T |
|
| Q |
122 |
tcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacattcaagccttcactaccttcat |
221 |
Q |
| |
|
| |||||||||||||||||||||| | || || ||||| || |||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||| |
|
|
| T |
23800533 |
taaaagcccttggacctagacttgtacctcgacttcccctttccttttcctctatgctcactcctccctcttgtaacattcaagccttcaccaccttcat |
23800434 |
T |
|
| Q |
222 |
caac |
225 |
Q |
| |
|
|||| |
|
|
| T |
23800433 |
caac |
23800430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 18854123 - 18854075
Alignment:
| Q |
178 |
ctcattcctccctcttttaacattcaagccttcactaccttcatcaacc |
226 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||| ||||||||||||| |
|
|
| T |
18854123 |
ctcattcctccctcttgtaacattcaagccttcaccaccttcatcaacc |
18854075 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 224; Significance: 1e-123; HSPs: 9)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 33790265 - 33790492
Alignment:
| Q |
1 |
accttcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33790265 |
accttcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
33790364 |
T |
|
| Q |
101 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
33790365 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttgtaacat |
33790464 |
T |
|
| Q |
201 |
tcaagccttcactaccttcatcaaccct |
228 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
33790465 |
tcaagccttcactaccttcatcaaccct |
33790492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 31398129 - 31397902
Alignment:
| Q |
1 |
accttcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
100 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31398129 |
accttcttcattcgaagcctccgcaacttgaactgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
31398030 |
T |
|
| Q |
101 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
31398029 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttgtaacat |
31397930 |
T |
|
| Q |
201 |
tcaagccttcactaccttcatcaaccct |
228 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
31397929 |
tcaagccttcactaccttcatcaaccct |
31397902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 37557761 - 37557534
Alignment:
| Q |
1 |
accttcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37557761 |
accttcttcatttgaagcctccgcaacttgaaccgagggaccaccttcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
37557662 |
T |
|
| Q |
101 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
37557661 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttgtaacat |
37557562 |
T |
|
| Q |
201 |
tcaagccttcactaccttcatcaaccct |
228 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
37557561 |
tcaagccttcactaccttcatcaaccct |
37557534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 27448772 - 27448997
Alignment:
| Q |
1 |
accttcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
100 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27448772 |
accttcttcatttgaagcctccacaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
27448871 |
T |
|
| Q |
101 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| || || ||||| ||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
27448872 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggacctcgacttccccttgccttttcctctatgctcattcctccctcttgtaacat |
27448971 |
T |
|
| Q |
201 |
tcaagccttcactaccttcatcaacc |
226 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
27448972 |
tcaagccttcactaccttcatcaacc |
27448997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 43596071 - 43596294
Alignment:
| Q |
1 |
accttcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
100 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43596071 |
accttcttcatttgaagcctccacaacttgaaccgaaggactaccatcgcccctcttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
43596170 |
T |
|
| Q |
101 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| || || ||||| ||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
43596171 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggacctcgacttccccttgccttttcctctatgctcattcctccctcttgtaacat |
43596270 |
T |
|
| Q |
201 |
tcaagccttcactaccttcatcaa |
224 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
43596271 |
tcaagccttcactaccttcatcaa |
43596294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 43628865 - 43629088
Alignment:
| Q |
1 |
accttcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
100 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43628865 |
accttcttcatttgaagcctccacaacttgaaccgaaggactaccatcgcccctcttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
43628964 |
T |
|
| Q |
101 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| || || ||||| ||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
43628965 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggacctcgacttccccttgccttttcctctatgctcattcctccctcttgtaacat |
43629064 |
T |
|
| Q |
201 |
tcaagccttcactaccttcatcaa |
224 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
43629065 |
tcaagccttcactaccttcatcaa |
43629088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 21 - 226
Target Start/End: Complemental strand, 24556702 - 24556497
Alignment:
| Q |
21 |
ccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaagaaagcatttatactttgattt |
120 |
Q |
| |
|
||||||||||||| ||||||||||||| ||||| |||||| | ||||| |||||||| |||||||| ||| |||||||||||||||||||||||||||| |
|
|
| T |
24556702 |
ccgcaacttgaacggaaggactaccattgccccatttatccaggcaatccttcttgaagtgaccttgtttgagacaaagaaagcatttatactttgattt |
24556603 |
T |
|
| Q |
121 |
gtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacattcaagccttcactaccttca |
220 |
Q |
| |
|
|||||| | |||||||||||||||||| || | ||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||| | | ||| |
|
|
| T |
24556602 |
gtcaaaactcttggacctagacttggacctcaacttccccatgccttttcctctatgatcattcctccctcttgcaacattcaagccttcaccaacatca |
24556503 |
T |
|
| Q |
221 |
tcaacc |
226 |
Q |
| |
|
|||||| |
|
|
| T |
24556502 |
tcaacc |
24556497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 21 - 226
Target Start/End: Complemental strand, 24597734 - 24597529
Alignment:
| Q |
21 |
ccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaagaaagcatttatactttgattt |
120 |
Q |
| |
|
||||||||||||| ||||||||||||| ||||| |||||| | ||||| |||||||| |||||||| ||| |||||||||||||||||||||||||||| |
|
|
| T |
24597734 |
ccgcaacttgaacggaaggactaccattgccccatttatccaggcaatccttcttgaagtgaccttgtttgagacaaagaaagcatttatactttgattt |
24597635 |
T |
|
| Q |
121 |
gtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacattcaagccttcactaccttca |
220 |
Q |
| |
|
|||||| | |||||||||||||||||| || | ||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||| | | ||| |
|
|
| T |
24597634 |
gtcaaaactcttggacctagacttggacctcaacttccccatgccttttcctctatgatcattcctccctcttgcaacattcaagccttcaccaacatca |
24597535 |
T |
|
| Q |
221 |
tcaacc |
226 |
Q |
| |
|
|||||| |
|
|
| T |
24597534 |
tcaacc |
24597529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 226
Target Start/End: Original strand, 34841687 - 34841790
Alignment:
| Q |
123 |
caaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacattcaagccttcactaccttcatc |
222 |
Q |
| |
|
|||| ||||||||| ||||||| || || || | ||| ||||||||||| |||||| | |||| || ||| ||| |||||||||||||| || |||||| |
|
|
| T |
34841687 |
caaatcccttggacttagacttagacctcgactacccaatgccttttcctatatgcttactccttccccttgtaatattcaagccttcaccactttcatc |
34841786 |
T |
|
| Q |
223 |
aacc |
226 |
Q |
| |
|
|||| |
|
|
| T |
34841787 |
aacc |
34841790 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 222; Significance: 1e-122; HSPs: 7)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 14738709 - 14738484
Alignment:
| Q |
1 |
accttcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14738709 |
accttcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
14738610 |
T |
|
| Q |
101 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
14738609 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttgtaacat |
14738510 |
T |
|
| Q |
201 |
tcaagccttcactaccttcatcaacc |
226 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
14738509 |
tcaagccttcactaccttcatcaacc |
14738484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 85 - 228
Target Start/End: Complemental strand, 33331499 - 33331356
Alignment:
| Q |
85 |
ttgcttgtgacaaagaaagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattc |
184 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33331499 |
ttgcttgtgacaaagaaagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattc |
33331400 |
T |
|
| Q |
185 |
ctccctcttttaacattcaagccttcactaccttcatcaaccct |
228 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
33331399 |
ctccctcttgtaacattcaagccttcactaccttcatcaaccct |
33331356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 5 - 145
Target Start/End: Original strand, 29485528 - 29485668
Alignment:
| Q |
5 |
tcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaagaaagc |
104 |
Q |
| |
|
|||||||| || |||||||||||||||| || |||||||||| |||||| ||| |||| ||||| |||||||||||||||||||| ||||||||||||| |
|
|
| T |
29485528 |
tcttcattggacacctccgcaacttgaacggatggactaccattgccccctttagccgggcaatccttcttgaaatgaccttgcttatgacaaagaaagc |
29485627 |
T |
|
| Q |
105 |
atttatactttgatttgtcaaagcccttggacctagacttg |
145 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29485628 |
atttatactttgatttgtcaaagcccttggacctagacttg |
29485668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 21 - 226
Target Start/End: Complemental strand, 24432438 - 24432239
Alignment:
| Q |
21 |
ccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaagaaagcatttatactttgattt |
120 |
Q |
| |
|
||||||||||||| ||||||||| ||| |||||| ||||||| |||| |||||||| |||| ||| |||||||||||||||||||||||||||||||| |
|
|
| T |
24432438 |
ccgcaacttgaacggaaggactagcattgccccctctatccgggtaatccttcttgaagtgacattgtttgtgacaaagaaagcatttatactttgattt |
24432339 |
T |
|
| Q |
121 |
gtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacattcaagccttcactaccttca |
220 |
Q |
| |
|
|||||| ||||||||||||||||| || || || ||| |||||||||||||||||| | | ||||||| ||||||||||| ||||| ||| ||| |
|
|
| T |
24432338 |
gtcaaaacccttggacctagactttgacctcgacttc------ccttttcctctatgctcacttcaccctcttgcaacattcaagctttcaccaccctca |
24432245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 33332213 - 33332122
Alignment:
| Q |
1 |
accttcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgt |
92 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33332213 |
accttcttcatttgaagcctccgcaacttgaaccgagggaccactttcgccccccttatccggacaatctttcttgaaatgaccttgcttgt |
33332122 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 226
Target Start/End: Original strand, 24077902 - 24078108
Alignment:
| Q |
23 |
gcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaagaaagcatttatactttgatttgt |
122 |
Q |
| |
|
||||||| ||| |||| |||||||| || ||||| || |||||||| |||||||| ||||| || || ||||||| || || |||||||||||| | |
|
|
| T |
24077902 |
gcaacttaaacagaagaactaccatttcctcccttgtcaggacaatccttcttgaagtgaccatgtttatgacaaatgaaatatcgatactttgatttat |
24078001 |
T |
|
| Q |
123 |
caaagcccttggacctagacttggatcttgatttccc---tttgccttttcctctatgctcattcctccctcttttaacattcaagccttcactaccttc |
219 |
Q |
| |
|
|||| |||||| || |||||| || | || ||||| ||||| |||||||||||| ||| |||| ||||| ||| ||||||||||||||||| || |
|
|
| T |
24078002 |
caaaccccttgaacttagactaagacttcgacttcccccctttgcattttcctctatgatcactcctttctcttgtaatattcaagccttcactactttt |
24078101 |
T |
|
| Q |
220 |
atcaacc |
226 |
Q |
| |
|
||||||| |
|
|
| T |
24078102 |
atcaacc |
24078108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 226
Target Start/End: Original strand, 9035413 - 9035474
Alignment:
| Q |
165 |
cttttcctctatgctcattcctccctcttttaacattcaagccttcactaccttcatcaacc |
226 |
Q |
| |
|
||||| ||||||||||| |||| || ||| ||| |||||||||||||| ||||||||||||| |
|
|
| T |
9035413 |
ctttttctctatgctcactccttccccttataatattcaagccttcaccaccttcatcaacc |
9035474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0028 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: scaffold0028
Description:
Target: scaffold0028; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 150092 - 149865
Alignment:
| Q |
1 |
accttcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
100 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
150092 |
accttcttcattcgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
149993 |
T |
|
| Q |
101 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
149992 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttgtaacat |
149893 |
T |
|
| Q |
201 |
tcaagccttcactaccttcatcaaccct |
228 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
149892 |
tcaagccttcactaccttcatcaaccct |
149865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 220; Significance: 1e-121; HSPs: 9)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 16883877 - 16884104
Alignment:
| Q |
1 |
accttcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
100 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16883877 |
accttcttcattcgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
16883976 |
T |
|
| Q |
101 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
16883977 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttgtaacat |
16884076 |
T |
|
| Q |
201 |
tcaagccttcactaccttcatcaaccct |
228 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
16884077 |
tcaagccttcactaccttcatcaaccct |
16884104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 24262460 - 24262233
Alignment:
| Q |
1 |
accttcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
100 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24262460 |
accttcttcattcgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
24262361 |
T |
|
| Q |
101 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
24262360 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttgtaacat |
24262261 |
T |
|
| Q |
201 |
tcaagccttcactaccttcatcaaccct |
228 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
24262260 |
tcaagccttcactaccttcatcaaccct |
24262233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 12405287 - 12405512
Alignment:
| Q |
1 |
accttcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12405287 |
accttcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
12405386 |
T |
|
| Q |
101 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||| |
|
|
| T |
12405387 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggatctcgatttccctttgccttttcctctatgctcattcctccctattgtaacat |
12405486 |
T |
|
| Q |
201 |
tcaagccttcactaccttcatcaacc |
226 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
12405487 |
tcaagccttcactaccttcatcaacc |
12405512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 18412608 - 18412833
Alignment:
| Q |
1 |
accttcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
18412608 |
accttcttcatttgaagcctccgcaacttggaccgaaggactaccatcgccccctttatccggacaatccttcttgaaatgaccttgcttgtgacaaaga |
18412707 |
T |
|
| Q |
101 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| || || ||||| ||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
18412708 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggacctcgacttccccttgccttttcctctatgctcattcctccctcttgcaacat |
18412807 |
T |
|
| Q |
201 |
tcaagccttcactaccttcatcaacc |
226 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
18412808 |
tcaagccttcactaccttcatcaacc |
18412833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 21644987 - 21645200
Alignment:
| Q |
1 |
accttcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
21644987 |
accttcttcatttgaagcctccgcaacttggaccgaaggactaccatcgccgcccttatccggacaatccttcttgaaatgaccttgcttgtgacaaaga |
21645086 |
T |
|
| Q |
101 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
21645087 |
aagcatttatactttgatttgtcaaagcccttggacctcgac------------ttccccttgccttttcctctatgctcattcctctctcttgcaacat |
21645174 |
T |
|
| Q |
201 |
tcaagccttcactaccttcatcaacc |
226 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
21645175 |
tcaagccttcactaccttcatcaacc |
21645200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 5 - 222
Target Start/End: Original strand, 21987874 - 21988091
Alignment:
| Q |
5 |
tcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaagaaagc |
104 |
Q |
| |
|
||||||||||| ||||||||||||||||| || ||||||||||||||||| ||||||| ||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
21987874 |
tcttcatttgacgcctccgcaacttgaacggacggactaccatcgccccctttatccgagcaatccttcttgaaatgaccttgcttatgacaaagaaaat |
21987973 |
T |
|
| Q |
105 |
atttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacattcaa |
204 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||| || || ||||| ||||||||||||||||||||||||| |||||| ||||||||| |
|
|
| T |
21987974 |
acttatactttgatttgtcaaagcccttggacctagacttggacctcgacttccccttgccttttcctctatgctcattccctcctcttgcaacattcaa |
21988073 |
T |
|
| Q |
205 |
gccttcactaccttcatc |
222 |
Q |
| |
|
|||||||| ||||||||| |
|
|
| T |
21988074 |
gccttcaccaccttcatc |
21988091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 9186282 - 9186069
Alignment:
| Q |
1 |
accttcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
100 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| ||||||||||||| |||||| || ||||| ||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
9186282 |
accttcttcatttgaagcctccacaacttgaacggaaggactaccattgccccctttgtccgggcaatccttcttgaaatgaccttgcttatgacaaaga |
9186183 |
T |
|
| Q |
101 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||| || | ||| ||||||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
9186182 |
aagcatttatactttgatttgtcaaagccct------------tggatctcgactgccccttgccttttcctctatgctcactcctccctcttgcaacat |
9186095 |
T |
|
| Q |
201 |
tcaagccttcactaccttcatcaacc |
226 |
Q |
| |
|
||||||||||| |||||||||||||| |
|
|
| T |
9186094 |
tcaagccttcaataccttcatcaacc |
9186069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 5 - 226
Target Start/End: Original strand, 49090643 - 49090852
Alignment:
| Q |
5 |
tcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaagaaagc |
104 |
Q |
| |
|
|||||||| || ||||||||||||||||| ||||||||||||| ||||| || ||||| |||| || ||||||||||||||||| ||||||||||||| |
|
|
| T |
49090643 |
tcttcattggacgcctccgcaacttgaacggaaggactaccatttccccctttgtccgggaaatccttattgaaatgaccttgcttatgacaaagaaagc |
49090742 |
T |
|
| Q |
105 |
atttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacattcaa |
204 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
49090743 |
atttatactttgatttgtcaaagcccttggacctcgac------------ttcccattgccttttcctctatgctcactcctccctcttacaacattcaa |
49090830 |
T |
|
| Q |
205 |
gccttcactaccttcatcaacc |
226 |
Q |
| |
|
| |||||| ||||||||||||| |
|
|
| T |
49090831 |
gtcttcaccaccttcatcaacc |
49090852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 226
Target Start/End: Complemental strand, 5818296 - 5818098
Alignment:
| Q |
28 |
ttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaagaaagcatttatactttgatttgtcaaag |
127 |
Q |
| |
|
|||||| |||| || |||| |||||| || ||| ||||||| || ||||| | ||| |||| |||||||||||||||| || ||||||||||| |
|
|
| T |
5818296 |
ttgaacggaagaaccaccactgccccctttgtccagacaatccttgttgaagtcaccgggcttatgacaaagaaagcattgtaacaatgatttgtcaagc |
5818197 |
T |
|
| Q |
128 |
cccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacattcaagccttcactaccttcatcaacc |
226 |
Q |
| |
|
||||||||| |||| ||||| || ||||| |||||||||||| |||||||| |||| || ||| ||||||||||||||||| ||| ||||||||| |
|
|
| T |
5818196 |
cccttggacttagagttggacctcaatttcgtcttgccttttcctttatgctcactccttccccttgcaacattcaagccttcaccaccctcatcaacc |
5818098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 220; Significance: 1e-121; HSPs: 8)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 8516044 - 8516271
Alignment:
| Q |
1 |
accttcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
100 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8516044 |
accttcttcattcgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
8516143 |
T |
|
| Q |
101 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
8516144 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttgtaacat |
8516243 |
T |
|
| Q |
201 |
tcaagccttcactaccttcatcaaccct |
228 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
8516244 |
tcaagccttcactaccttcatcaaccct |
8516271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 32479290 - 32479517
Alignment:
| Q |
1 |
accttcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
100 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32479290 |
accttcttcattcgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
32479389 |
T |
|
| Q |
101 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
32479390 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttgtaacat |
32479489 |
T |
|
| Q |
201 |
tcaagccttcactaccttcatcaaccct |
228 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
32479490 |
tcaagccttcactaccttcatcaaccct |
32479517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 5 - 226
Target Start/End: Complemental strand, 28490306 - 28490086
Alignment:
| Q |
5 |
tcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaagaaagc |
104 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28490306 |
tcttcatttgaagcctccgtaacttgaaccgaaggactaccatcgccccc-ttatccggaaaatctttcttgaaatgaccttgcttgtgacaaagaaagc |
28490208 |
T |
|
| Q |
105 |
atttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacattcaa |
204 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||| || || ||||| |||||||||||||||||||||||||| |||||| |||||||||| |
|
|
| T |
28490207 |
atttatactttgatttgtcaaagcccttggatctagacttggacctcgacttccccttgccttttcctctatgctcattccttcctcttgtaacattcaa |
28490108 |
T |
|
| Q |
205 |
gccttcactaccttcatcaacc |
226 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
28490107 |
gccttcactaccttcatcaacc |
28490086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 5 - 226
Target Start/End: Original strand, 16263316 - 16263538
Alignment:
| Q |
5 |
tcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaa-tgaccttgcttgtgacaaagaaag |
103 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||| | ||||| ||||||||| ||||||||||| |||||||||||| |
|
|
| T |
16263316 |
tcttcatttgaagcctccgcaacttgaacggaaggactaccattgccccctttatcctggcaatccttcttgaaaatgaccttgcttatgacaaagaaag |
16263415 |
T |
|
| Q |
104 |
catttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacattca |
203 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||| || || ||||| ||||||||||||||||||||| ||||||||||| |||||||| |
|
|
| T |
16263416 |
catttatactttgatttgtcaaagccctgggacctagacttggacctcgacttccccttgccttttcctctatgctcactcctccctcttgcaacattca |
16263515 |
T |
|
| Q |
204 |
agccttcactaccttcatcaacc |
226 |
Q |
| |
|
||||||||| ||||||||||||| |
|
|
| T |
16263516 |
agccttcaccaccttcatcaacc |
16263538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 5 - 226
Target Start/End: Complemental strand, 9602980 - 9602758
Alignment:
| Q |
5 |
tcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaagaaagc |
104 |
Q |
| |
|
||||||||||| ||||||||||||||||| ||||||| ||||| |||| | |||||||| |||| |||||||| ||||||||||| ||||||||||||| |
|
|
| T |
9602980 |
tcttcatttgacgcctccgcaacttgaacggaaggacaaccattgccctctctatccggaaaatccttcttgaagtgaccttgcttatgacaaagaaagc |
9602881 |
T |
|
| Q |
105 |
atttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaac--attc |
202 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||| ||| |||| |
|
|
| T |
9602880 |
atttatactttgatttgtcaaagcccttggacctagactaggaccttgatttccctttgccttttcctctatgctcactcctccctcttgcaacatattc |
9602781 |
T |
|
| Q |
203 |
aagccttcactaccttcatcaacc |
226 |
Q |
| |
|
||||| |||| ||||||||||||| |
|
|
| T |
9602780 |
aagcc-tcaccaccttcatcaacc |
9602758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 5 - 226
Target Start/End: Complemental strand, 3324669 - 3324460
Alignment:
| Q |
5 |
tcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaagaaagc |
104 |
Q |
| |
|
|||||||| || |||| ||||||||| || |||||| |||||| |||||| |||| ||| ||||| |||||||| ||||||||||| ||||||||||||| |
|
|
| T |
3324669 |
tcttcattggacgccttcgcaacttgcacggaaggattaccattgccccctttattcgggcaatccttcttgaagtgaccttgcttatgacaaagaaagc |
3324570 |
T |
|
| Q |
105 |
atttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacattcaa |
204 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
3324569 |
atttatactttgatttgtcaaagcccttggacctcgac------------ttccccttgccttttcctctatgctcactcctccctcttgcaacattcaa |
3324482 |
T |
|
| Q |
205 |
gccttcactaccttcatcaacc |
226 |
Q |
| |
|
|||||||| ||||||||||||| |
|
|
| T |
3324481 |
gccttcaccaccttcatcaacc |
3324460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 2673357 - 2673323
Alignment:
| Q |
1 |
accttcttcatttgaagcctccgcaacttgaaccg |
35 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||| |
|
|
| T |
2673357 |
accttcttcattcgaagcctccgcaacttgaaccg |
2673323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 113
Target Start/End: Original strand, 10611835 - 10611889
Alignment:
| Q |
59 |
tccggacaatctttcttgaaatgaccttgcttgtgacaaagaaagcatttatact |
113 |
Q |
| |
|
|||||||||||||||||||| |||||| | |||||||||| ||| ||||| |||| |
|
|
| T |
10611835 |
tccggacaatctttcttgaagtgacctggattgtgacaaataaaacatttgtact |
10611889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 216; Significance: 1e-119; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 19348228 - 19348454
Alignment:
| Q |
1 |
accttcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19348228 |
accttcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgcccc-cttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
19348326 |
T |
|
| Q |
101 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
19348327 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttgtaacat |
19348426 |
T |
|
| Q |
201 |
tcaagccttcactaccttcatcaaccct |
228 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
19348427 |
tcaagccttcactaccttcatcaaccct |
19348454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 25402600 - 25402825
Alignment:
| Q |
1 |
accttcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
100 |
Q |
| |
|
||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
25402600 |
accttcttcatttgatgcctccgcaacttggaccgaaggactaccatcgccccccttatccggacaatccttcttgaaatgaccttgcttgtgacaaaga |
25402699 |
T |
|
| Q |
101 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| || || ||||| ||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
25402700 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggacctcgacttccccttgccttttcctctatgctcattcctccctcttacaacat |
25402799 |
T |
|
| Q |
201 |
tcaagccttcactaccttcatcaacc |
226 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
25402800 |
tcaagccttcactaccttcatcaacc |
25402825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 17 - 226
Target Start/End: Complemental strand, 10446546 - 10446349
Alignment:
| Q |
17 |
gcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaagaaagcatttatactttg |
116 |
Q |
| |
|
||||||||||||||||| ||| ||||||||| |||||| |||||| | ||||| |||||||| ||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
10446546 |
gcctccgcaacttgaacggaatgactaccattgccccctttatccaggcaatccttcttgaagtgaccttgcttatgacaaagaaagcatttatactttg |
10446447 |
T |
|
| Q |
117 |
atttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacattcaagccttcactacc |
216 |
Q |
| |
|
|||||||||||||||||||||| ||| ||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||| ||| |
|
|
| T |
10446446 |
atttgtcaaagcccttggacctcgac------------ttccccttgccttttcctctatggtcgctcctccctcttgcaacattcaagccttcaccacc |
10446359 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 214; Significance: 1e-117; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 41397189 - 41397414
Alignment:
| Q |
1 |
accttcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
100 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41397189 |
accttctttatttgaagcctccgcaacttgaaccgaaggactaccgtcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
41397288 |
T |
|
| Q |
101 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
41397289 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttgtaacat |
41397388 |
T |
|
| Q |
201 |
tcaagccttcactaccttcatcaacc |
226 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
41397389 |
tcaagccttcactaccttcatcaacc |
41397414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 19359975 - 19359750
Alignment:
| Q |
1 |
accttcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||| |||| ||||||||||||||||||| ||||||||| |
|
|
| T |
19359975 |
accttcttcatttgaagcctccgcaacttggacggaaggactaccatcgccccctttatccgggaaatccttcttgaaatgaccttgctaatgacaaaga |
19359876 |
T |
|
| Q |
101 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||| || || ||||| ||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
19359875 |
aagcatttatactttgatttgtcaaagcccttggaccttgacttggacctcgacttccccttgccttttcctctatgctcattcctccctcttgcaacat |
19359776 |
T |
|
| Q |
201 |
tcaagccttcactaccttcatcaacc |
226 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
19359775 |
tcaagccttcactaccttcatcaacc |
19359750 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 5 - 226
Target Start/End: Complemental strand, 47099951 - 47099730
Alignment:
| Q |
5 |
tcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaagaaagc |
104 |
Q |
| |
|
|||||||| ||||||||| |||||||||| ||||||||||||| |||||| |||||||| |||| |||||||| ||||||||||| ||||||||||||| |
|
|
| T |
47099951 |
tcttcattggaagcctccacaacttgaacggaaggactaccattgccccctttatccgggtaatccttcttgaagtgaccttgcttatgacaaagaaagc |
47099852 |
T |
|
| Q |
105 |
atttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacattcaa |
204 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||| || || ||||| | ||||||||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
47099851 |
atttatactttgatttgtcaaaccccttggacctagacttggacctcgacttcccctcgccttttcctctatgctcactcctccctcttgcaacattcaa |
47099752 |
T |
|
| Q |
205 |
gccttcactaccttcatcaacc |
226 |
Q |
| |
|
|||||||| |||||| |||||| |
|
|
| T |
47099751 |
gccttcaccaccttcttcaacc |
47099730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 226
Target Start/End: Complemental strand, 9024917 - 9024711
Alignment:
| Q |
21 |
ccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaagaaagcatttatactttgattt |
120 |
Q |
| |
|
||||||||||||| |||| || ||||| |||||| ||||| || ||| |||||||| ||| | || ||||| ||||||||| |||||||||| |
|
|
| T |
9024917 |
ccgcaacttgaacggaagaaccaccattgccccctttatcacgaaaatgcttcttgaactgatcgggcccatgacagagaaagcatcataactttgattt |
9024818 |
T |
|
| Q |
121 |
gtcaaag-cccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacattcaagccttcactaccttc |
219 |
Q |
| |
|
|||||| ||||||||| |||||||||| || || ||||| ||||||||| ||||||||||| | | ||| |||||||||||||||||| ||| || |
|
|
| T |
9024817 |
gtcaaactcccttggacttagacttggacctcgacttccccttgcctttttctctatgctcactttatcaacttgtaacattcaagccttcaccaccctc |
9024718 |
T |
|
| Q |
220 |
atcaacc |
226 |
Q |
| |
|
||||||| |
|
|
| T |
9024717 |
atcaacc |
9024711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 224
Target Start/End: Complemental strand, 17346588 - 17346428
Alignment:
| Q |
64 |
acaatctttcttgaaatgaccttgcttgtgacaaagaaagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttg |
163 |
Q |
| |
|
|||||| |||||||| ||| | |||| ||||||||||||||| ||||| |||| ||||| |||||| || |||||||||| || || |||| ||| |
|
|
| T |
17346588 |
acaatccttcttgaagtgatcgggcttttgacaaagaaagcatcgtaacttttatttctcaaatcccttgtacttagacttggacctcgacctccccttg |
17346489 |
T |
|
| Q |
164 |
ccttttcctctatgctcattcctccctcttttaacattcaagccttcactaccttcatcaa |
224 |
Q |
| |
|
|||||| ||||| ||||| |||| || ||| ||||||||| || |||| ||||| ||||| |
|
|
| T |
17346488 |
cctttttctctacgctcactccttccccttgcaacattcaaaccgtcaccaccttaatcaa |
17346428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 206; Significance: 1e-113; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 9225541 - 9225316
Alignment:
| Q |
1 |
accttcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
100 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9225541 |
accttcttcatttgaagtctccgtaacttgaaccgagggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
9225442 |
T |
|
| Q |
101 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacat |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
9225441 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttgtaacat |
9225342 |
T |
|
| Q |
201 |
tcaagccttcactaccttcatcaacc |
226 |
Q |
| |
|
||||||||||| |||||||||||||| |
|
|
| T |
9225341 |
tcaagccttcagtaccttcatcaacc |
9225316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 5 - 226
Target Start/End: Original strand, 5146855 - 5147076
Alignment:
| Q |
5 |
tcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaagaaagc |
104 |
Q |
| |
|
||||||||||| ||||||||||||||||| || ||||||||||| ||||| |||||||||||||| |||||||| ||||||||||| ||||||||||| | |
|
|
| T |
5146855 |
tcttcatttgatgcctccgcaacttgaacggacggactaccatcaccccctttatccggacaatccttcttgaagtgaccttgcttatgacaaagaaaac |
5146954 |
T |
|
| Q |
105 |
atttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacattcaa |
204 |
Q |
| |
|
| ||||||||| ||||||||||||| |||||||||||| |||| || || ||||| |||||||||||||||||||||||||| |||||| ||||||||| |
|
|
| T |
5146955 |
acttatacttttatttgtcaaagcctttggacctagacctggacctcgacttccccttgccttttcctctatgctcattccttcctcttgcaacattcaa |
5147054 |
T |
|
| Q |
205 |
gccttcactaccttcatcaacc |
226 |
Q |
| |
|
|||||||| ||||||||||||| |
|
|
| T |
5147055 |
gccttcaccaccttcatcaacc |
5147076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 5 - 225
Target Start/End: Complemental strand, 16625126 - 16624918
Alignment:
| Q |
5 |
tcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaagaaagc |
104 |
Q |
| |
|
|||||||| || ||||||||||||||||| |||||||||| || |||||| |||||||| ||||| |||||||||||||||||||| ||||||||||||| |
|
|
| T |
16625126 |
tcttcattggacgcctccgcaacttgaacggaaggactacgattgccccctttatccgggcaatccttcttgaaatgaccttgcttatgacaaagaaagc |
16625027 |
T |
|
| Q |
105 |
atttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacattcaa |
204 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| ||| ||||| |||||||||||| |||||||| ||||||||||| ||||||||| |
|
|
| T |
16625026 |
atttatactttgatttttcaaagcccttggacctcgac------------ttccccttgccttttcctttatgctcactcctccctcttgcaacattcaa |
16624939 |
T |
|
| Q |
205 |
gccttcactaccttcatcaac |
225 |
Q |
| |
|
|||||||| |||||||||||| |
|
|
| T |
16624938 |
gccttcaccaccttcatcaac |
16624918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 80 - 211
Target Start/End: Complemental strand, 18241798 - 18241667
Alignment:
| Q |
80 |
tgaccttgcttgtgacaaagaaagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgct |
179 |
Q |
| |
|
|||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | || || ||||| || |||||||||||||||| |
|
|
| T |
18241798 |
tgacattgcttatgacaaagaaagcatttatactttgatttgtcaaagcccttggacctagacttgcacctcgacttcccctttccttttcctctatgct |
18241699 |
T |
|
| Q |
180 |
cattcctccctcttttaacattcaagccttca |
211 |
Q |
| |
|
|| ||||||||||| |||||||||||||||| |
|
|
| T |
18241698 |
cactcctccctcttgcaacattcaagccttca |
18241667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 116
Target Start/End: Complemental strand, 15313441 - 15313384
Alignment:
| Q |
59 |
tccggacaatctttcttgaaatgaccttgcttgtgacaaagaaagcatttatactttg |
116 |
Q |
| |
|
||||||||||| |||||||| |||||| | |||||||||| ||| ||||| ||||||| |
|
|
| T |
15313441 |
tccggacaatccttcttgaagtgacctggattgtgacaaataaaacatttgtactttg |
15313384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0188 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: scaffold0188
Description:
Target: scaffold0188; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 19076 - 18851
Alignment:
| Q |
1 |
accttcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaaga |
100 |
Q |
| |
|
|||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||| |
|
|
| T |
19076 |
accttcttcatttgaagccttcgcaacttggaccgaaggactaccatcgccccccttatccggacaatccttcttaaaataaccttgcttgtgacaaaga |
18977 |
T |
|
| Q |
101 |
aagcatttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacat |
200 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||| || || ||||| ||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
18976 |
aagcatttatactttgatttgtcaaatcccttggacctagacttggacctcgacttccccttgccttttcctctatgctcattcctccctcttgtaacat |
18877 |
T |
|
| Q |
201 |
tcaagccttcactaccttcatcaacc |
226 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
18876 |
tcaagccttcactaccttcatcaacc |
18851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0355 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: scaffold0355
Description:
Target: scaffold0355; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 41 - 226
Target Start/End: Complemental strand, 974 - 789
Alignment:
| Q |
41 |
ctaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaagaaagcatttatactttgatttgtcaaagcccttggacctag |
140 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||| |
|
|
| T |
974 |
ctaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaagaaagcatttatactttgatttgttaaatcccttggatctag |
875 |
T |
|
| Q |
141 |
acttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacattcaagccttcactaccttcatcaacc |
226 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
874 |
acttggatctttatttccctttgccttttcctctatgctcatttctccctcttgtaacattcaagccttcactaccttcatcaacc |
789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0842 (Bit Score: 154; Significance: 8e-82; HSPs: 1)
Name: scaffold0842
Description:
Target: scaffold0842; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 5 - 226
Target Start/End: Complemental strand, 4327 - 4106
Alignment:
| Q |
5 |
tcttcatttgaagcctccgcaacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaagaaagc |
104 |
Q |
| |
|
||||||||||| ||||| |||| |||||| ||||||||||||| |||||| |||||||| ||||| |||||||||||||||||||| ||||||||||||| |
|
|
| T |
4327 |
tcttcatttgacgcctctgcaaattgaacggaaggactaccattgccccctttatccgggcaatccttcttgaaatgaccttgcttatgacaaagaaagc |
4228 |
T |
|
| Q |
105 |
atttatactttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacattcaa |
204 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||| || || ||||| ||||||||||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
4227 |
atttatactttgatttgtcaaagctcttggacctagacttggacctcgacttccccttgccttttcctctatgctcactcctccctcttgcaacattcaa |
4128 |
T |
|
| Q |
205 |
gccttcactaccttcatcaacc |
226 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
4127 |
gccttcactaccttcatcaacc |
4106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0006
Description:
Target: scaffold0006; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 24 - 226
Target Start/End: Original strand, 1480 - 1682
Alignment:
| Q |
24 |
caacttgaaccgaaggactaccatcgccccccttatccggacaatctttcttgaaatgaccttgcttgtgacaaagaaagcatttatactttgatttgtc |
123 |
Q |
| |
|
|||||||||| ||||||||||||| |||||| |||| ||| |||| ||||| || ||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
1480 |
caacttgaacggaaggactaccattgccccctttattcgggaaatccttctttaagtgaccttgcttatgacaaagaaagcatttatactttgatttgtc |
1579 |
T |
|
| Q |
124 |
aaagcccttggacctagacttggatcttgatttccctttgccttttcctctatgctcattcctccctcttttaacattcaagccttcactaccttcatca |
223 |
Q |
| |
|
|||||||| ||||||||||||||| || || ||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||| |
|
|
| T |
1580 |
aaagccctgggacctagacttggacctcgacttccccttgccttttcctctatgctcactcctccctcttgcaacattcaagccttcaccaccttcatca |
1679 |
T |
|
| Q |
224 |
acc |
226 |
Q |
| |
|
||| |
|
|
| T |
1680 |
acc |
1682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0184 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0184
Description:
Target: scaffold0184; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 177
Target Start/End: Complemental strand, 30510 - 30444
Alignment:
| Q |
111 |
actttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatg |
177 |
Q |
| |
|
|||||||||||||||| ||||||||| ||||| |||| || || ||||||||||||||||||||||| |
|
|
| T |
30510 |
actttgatttgtcaaaacccttggacttagacatggacctcgacttccctttgccttttcctctatg |
30444 |
T |
|
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Target: scaffold0078 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0078
Description:
Target: scaffold0078; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 42334 - 42400
Alignment:
| Q |
111 |
actttgatttgtcaaagcccttggacctagacttggatcttgatttccctttgccttttcctctatg |
177 |
Q |
| |
|
|||||||||||||||| ||||||||| ||||| |||| || || ||||||||||||||||||||||| |
|
|
| T |
42334 |
actttgatttgtcaaaacccttggacttagacatggacctcgacttccctttgccttttcctctatg |
42400 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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