View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11737A_low_537 (Length: 226)
Name: NF11737A_low_537
Description: NF11737A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11737A_low_537 |
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Alignment Details
Target: chr8 (Bit Score: 164; Significance: 8e-88; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 32 - 207
Target Start/End: Complemental strand, 38124822 - 38124647
Alignment:
| Q |
32 |
cacacaaaaacaaattcagctgtgtaagtagaaaaaagtgttttcaactgtagatcgtggaatatagcagtttgttcaaactctattaagctacagagtt |
131 |
Q |
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| T |
38124822 |
cacacaaaaacaaattcagctgtgtaagtagaaaaaagtgttttcaagtgtagatcgtggaatatagcagtttgttcaaactctattaagttacagagtt |
38124723 |
T |
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| Q |
132 |
tcatagctactatttgacattactttgttctaaacagcgtatcacgaaccaatagcaatttatttaaattccatag |
207 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38124722 |
tcatagctactatttgacatcactttgttctaaacagcgtatcacgaaccaatagcaatttatttaaattccatag |
38124647 |
T |
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