View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11737A_low_563 (Length: 221)

Name: NF11737A_low_563
Description: NF11737A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11737A_low_563
NF11737A_low_563
[»] scaffold0190 (1 HSPs)
scaffold0190 (19-219)||(32739-32940)
[»] chr8 (23 HSPs)
chr8 (19-219)||(29303286-29303487)
chr8 (20-219)||(16271085-16271285)
chr8 (20-219)||(6679831-6680031)
chr8 (20-219)||(12305478-12305678)
chr8 (20-219)||(14565862-14566062)
chr8 (20-219)||(803534-803734)
chr8 (20-219)||(6604378-6604578)
chr8 (20-219)||(31416335-31416535)
chr8 (20-219)||(27355268-27355468)
chr8 (20-219)||(1266958-1267158)
chr8 (20-219)||(23655647-23655847)
chr8 (23-219)||(31570706-31570903)
chr8 (19-219)||(20975511-20975712)
chr8 (20-215)||(19852135-19852331)
chr8 (20-215)||(19858171-19858367)
chr8 (19-219)||(22061293-22061494)
chr8 (20-219)||(22051583-22051783)
chr8 (19-179)||(22371700-22371861)
chr8 (24-179)||(21841177-21841333)
chr8 (20-161)||(20009780-20009922)
chr8 (19-179)||(20388859-20389020)
chr8 (20-193)||(20395986-20396160)
chr8 (133-185)||(22366640-22366692)
[»] chr5 (26 HSPs)
chr5 (19-219)||(23079688-23079889)
chr5 (20-219)||(22503247-22503447)
chr5 (20-219)||(24797997-24798197)
chr5 (20-219)||(14886591-14886791)
chr5 (20-219)||(24619895-24620095)
chr5 (20-219)||(24716126-24716326)
chr5 (20-219)||(24749154-24749354)
chr5 (20-219)||(37542981-37543181)
chr5 (20-219)||(25848643-25848843)
chr5 (19-219)||(20342850-20343051)
chr5 (19-219)||(22235519-22235720)
chr5 (20-219)||(17268934-17269134)
chr5 (19-212)||(20822028-20822222)
chr5 (20-219)||(21890359-21890559)
chr5 (79-219)||(22381767-22381908)
chr5 (19-218)||(20774328-20774528)
chr5 (19-218)||(22462521-22462721)
chr5 (19-212)||(28894541-28894735)
chr5 (19-212)||(28916012-28916206)
chr5 (19-212)||(28923367-28923561)
chr5 (19-219)||(21563572-21563773)
chr5 (19-140)||(21831360-21831482)
chr5 (19-75)||(21680377-21680433)
chr5 (20-78)||(21496783-21496841)
chr5 (53-173)||(22332520-22332641)
chr5 (133-185)||(19566403-19566455)
[»] scaffold0060 (1 HSPs)
scaffold0060 (24-219)||(43468-43664)
[»] chr1 (12 HSPs)
chr1 (20-219)||(20295081-20295281)
chr1 (20-219)||(31539487-31539687)
chr1 (20-219)||(37677749-37677949)
chr1 (20-219)||(24099093-24099293)
chr1 (19-219)||(20835377-20835578)
chr1 (19-219)||(22432605-22432806)
chr1 (19-219)||(20939552-20939753)
chr1 (19-219)||(19662626-19662831)
chr1 (20-143)||(19855050-19855174)
chr1 (19-218)||(20856250-20856450)
chr1 (20-116)||(21951682-21951778)
chr1 (154-219)||(16369966-16370031)
[»] chr7 (30 HSPs)
chr7 (20-219)||(12456346-12456546)
chr7 (20-219)||(49152945-49153145)
chr7 (20-219)||(13022001-13022201)
chr7 (20-219)||(11305668-11305868)
chr7 (19-203)||(12457300-12457485)
chr7 (20-219)||(13968073-13968273)
chr7 (20-219)||(16949876-16950076)
chr7 (19-218)||(14285780-14285980)
chr7 (20-219)||(812-1012)
chr7 (20-219)||(8211533-8211733)
chr7 (19-219)||(6414155-6414356)
chr7 (20-219)||(15102008-15102208)
chr7 (20-215)||(26118010-26118206)
chr7 (19-211)||(13666189-13666382)
chr7 (19-219)||(14130517-14130718)
chr7 (19-219)||(14434335-14434536)
chr7 (19-219)||(23505274-23505475)
chr7 (23-219)||(18053361-18053558)
chr7 (20-219)||(16071699-16071899)
chr7 (20-219)||(19147855-19148055)
chr7 (20-219)||(20747254-20747454)
chr7 (19-219)||(15341075-15341276)
chr7 (19-219)||(19613319-19613520)
chr7 (20-219)||(14263649-14263849)
chr7 (19-193)||(11387832-11388007)
chr7 (19-219)||(12206204-12206405)
chr7 (19-185)||(21662638-21662805)
chr7 (24-193)||(11771672-11771842)
chr7 (65-219)||(8199271-8199426)
chr7 (65-219)||(18178385-18178540)
[»] chr3 (27 HSPs)
chr3 (20-219)||(16338158-16338358)
chr3 (20-219)||(28754601-28754801)
chr3 (20-219)||(47124227-47124427)
chr3 (20-219)||(10384251-10384451)
chr3 (38-219)||(16329324-16329507)
chr3 (20-219)||(11303419-11303619)
chr3 (19-219)||(18133991-18134192)
chr3 (19-218)||(17492914-17493114)
chr3 (19-178)||(11960814-11960974)
chr3 (20-170)||(14574255-14574406)
chr3 (23-219)||(8758731-8758928)
chr3 (19-219)||(13942307-13942508)
chr3 (23-219)||(41177805-41178002)
chr3 (20-219)||(16827849-16828048)
chr3 (38-219)||(13322316-13322498)
chr3 (23-219)||(4678721-4678918)
chr3 (20-219)||(16836156-16836356)
chr3 (24-219)||(12360192-12360388)
chr3 (19-212)||(44777537-44777731)
chr3 (20-219)||(16380574-16380774)
chr3 (19-219)||(10419690-10419891)
chr3 (19-219)||(13971765-13971966)
chr3 (19-219)||(14086956-14087157)
chr3 (74-179)||(15952668-15952774)
chr3 (19-81)||(31694831-31694893)
chr3 (19-219)||(15227932-15228133)
chr3 (19-77)||(31939329-31939387)
[»] chr6 (21 HSPs)
chr6 (19-219)||(10468411-10468612)
chr6 (19-211)||(14381029-14381222)
chr6 (20-219)||(5296769-5296969)
chr6 (20-219)||(24364930-24365130)
chr6 (20-218)||(8762496-8762695)
chr6 (42-219)||(17416004-17416182)
chr6 (19-219)||(19453938-19454139)
chr6 (19-219)||(21472119-21472320)
chr6 (19-219)||(15459854-15460055)
chr6 (19-219)||(27560179-27560380)
chr6 (23-219)||(28282379-28282576)
chr6 (19-219)||(34645148-34645349)
chr6 (20-173)||(25768755-25768909)
chr6 (19-218)||(21563694-21563894)
chr6 (19-218)||(21569553-21569753)
chr6 (20-219)||(22796195-22796395)
chr6 (19-193)||(19879842-19880017)
chr6 (19-87)||(19435653-19435721)
chr6 (20-219)||(18795208-18795408)
chr6 (48-173)||(5838810-5838936)
chr6 (152-193)||(15896638-15896679)
[»] chr4 (16 HSPs)
chr4 (19-219)||(33223577-33223778)
chr4 (20-219)||(3264212-3264412)
chr4 (20-219)||(20891636-20891836)
chr4 (20-218)||(11206649-11206848)
chr4 (20-219)||(29452955-29453155)
chr4 (20-219)||(44661284-44661484)
chr4 (20-219)||(15246578-15246778)
chr4 (49-219)||(15358537-15358708)
chr4 (20-219)||(1648695-1648895)
chr4 (20-219)||(27901040-27901240)
chr4 (20-219)||(15002782-15002982)
chr4 (21-166)||(15319858-15320004)
chr4 (19-179)||(15078329-15078490)
chr4 (19-167)||(8706624-8706773)
chr4 (19-177)||(14691598-14691757)
chr4 (19-219)||(15414443-15414644)
[»] scaffold0009 (1 HSPs)
scaffold0009 (20-219)||(249298-249498)
[»] chr2 (19 HSPs)
chr2 (20-219)||(31830943-31831143)
chr2 (20-219)||(1064036-1064236)
chr2 (20-219)||(20828544-20828744)
chr2 (20-219)||(20833270-20833470)
chr2 (19-219)||(19652009-19652210)
chr2 (20-219)||(11357832-11358032)
chr2 (20-219)||(24642027-24642227)
chr2 (19-219)||(23277061-23277262)
chr2 (23-219)||(12574638-12574835)
chr2 (19-219)||(24948874-24949075)
chr2 (23-219)||(27788026-27788223)
chr2 (20-219)||(27210130-27210330)
chr2 (38-219)||(21125135-21125317)
chr2 (19-219)||(27365036-27365237)
chr2 (19-124)||(23294315-23294421)
chr2 (19-163)||(23111076-23111221)
chr2 (19-105)||(45529911-45529997)
chr2 (133-182)||(23817115-23817164)
chr2 (147-219)||(23294243-23294315)
[»] scaffold0010 (2 HSPs)
scaffold0010 (20-219)||(41754-41954)
scaffold0010 (19-219)||(46819-47020)
[»] scaffold0093 (1 HSPs)
scaffold0093 (20-219)||(26946-27146)
[»] scaffold0034 (3 HSPs)
scaffold0034 (20-219)||(13322-13522)
scaffold0034 (19-219)||(4373-4574)
scaffold0034 (20-219)||(68055-68255)
[»] scaffold0035 (1 HSPs)
scaffold0035 (20-218)||(3437-3636)
[»] scaffold1061 (1 HSPs)
scaffold1061 (20-218)||(2274-2473)
[»] scaffold0104 (2 HSPs)
scaffold0104 (20-194)||(20104-20279)
scaffold0104 (20-194)||(22924-23099)
[»] scaffold0089 (1 HSPs)
scaffold0089 (20-219)||(16134-16334)
[»] scaffold0053 (2 HSPs)
scaffold0053 (20-219)||(57268-57468)
scaffold0053 (20-168)||(48455-48604)
[»] scaffold0156 (1 HSPs)
scaffold0156 (20-219)||(27910-28110)
[»] scaffold0067 (3 HSPs)
scaffold0067 (19-218)||(51600-51800)
scaffold0067 (19-218)||(60634-60834)
scaffold0067 (19-218)||(67022-67222)
[»] scaffold0058 (1 HSPs)
scaffold0058 (19-219)||(19805-20006)
[»] scaffold0203 (1 HSPs)
scaffold0203 (19-219)||(13719-13920)
[»] scaffold0120 (1 HSPs)
scaffold0120 (19-219)||(944-1145)
[»] scaffold1646 (1 HSPs)
scaffold1646 (19-194)||(34-210)
[»] scaffold0742 (1 HSPs)
scaffold0742 (20-219)||(5898-6098)
[»] scaffold0046 (1 HSPs)
scaffold0046 (19-210)||(81252-81444)
[»] scaffold0011 (3 HSPs)
scaffold0011 (20-211)||(149263-149455)
scaffold0011 (19-216)||(195124-195322)
scaffold0011 (20-193)||(25954-26128)
[»] scaffold0126 (1 HSPs)
scaffold0126 (19-219)||(41602-41803)
[»] scaffold0114 (2 HSPs)
scaffold0114 (19-219)||(44190-44391)
scaffold0114 (19-219)||(45202-45403)
[»] scaffold0076 (2 HSPs)
scaffold0076 (19-219)||(56320-56521)
scaffold0076 (19-219)||(33097-33298)
[»] scaffold0004 (3 HSPs)
scaffold0004 (19-219)||(323389-323590)
scaffold0004 (19-219)||(118253-118454)
scaffold0004 (19-179)||(202888-203049)
[»] scaffold0404 (1 HSPs)
scaffold0404 (20-219)||(5435-5635)
[»] scaffold0326 (1 HSPs)
scaffold0326 (20-219)||(17958-18158)
[»] scaffold0261 (2 HSPs)
scaffold0261 (20-219)||(14618-14818)
scaffold0261 (20-219)||(22797-22997)
[»] scaffold0020 (1 HSPs)
scaffold0020 (19-173)||(100972-101127)
[»] scaffold0367 (1 HSPs)
scaffold0367 (19-212)||(6658-6852)
[»] scaffold0298 (5 HSPs)
scaffold0298 (20-209)||(20678-20868)
scaffold0298 (19-107)||(11477-11565)
scaffold0298 (19-107)||(15247-15335)
scaffold0298 (118-219)||(12881-12982)
scaffold0298 (118-219)||(16651-16752)
[»] scaffold0222 (2 HSPs)
scaffold0222 (19-219)||(2775-2976)
scaffold0222 (19-211)||(7753-7946)
[»] scaffold0101 (1 HSPs)
scaffold0101 (19-219)||(4872-5073)
[»] scaffold0071 (1 HSPs)
scaffold0071 (19-219)||(48627-48828)
[»] scaffold0213 (1 HSPs)
scaffold0213 (21-212)||(5757-5949)
[»] scaffold0102 (1 HSPs)
scaffold0102 (20-219)||(40423-40623)
[»] scaffold0113 (1 HSPs)
scaffold0113 (19-218)||(25285-25485)
[»] scaffold0029 (2 HSPs)
scaffold0029 (19-219)||(113244-113445)
scaffold0029 (19-212)||(95422-95616)
[»] scaffold0682 (1 HSPs)
scaffold0682 (20-219)||(568-768)
[»] scaffold0049 (1 HSPs)
scaffold0049 (20-219)||(51284-51484)
[»] scaffold1710 (1 HSPs)
scaffold1710 (19-219)||(549-750)
[»] scaffold0518 (1 HSPs)
scaffold0518 (19-219)||(11454-11655)
[»] scaffold0005 (1 HSPs)
scaffold0005 (19-219)||(260993-261194)
[»] scaffold0751 (1 HSPs)
scaffold0751 (20-219)||(2479-2679)
[»] scaffold0348 (1 HSPs)
scaffold0348 (20-219)||(6869-7069)
[»] scaffold0165 (1 HSPs)
scaffold0165 (20-179)||(5155-5315)
[»] scaffold0139 (1 HSPs)
scaffold0139 (20-179)||(570-730)
[»] scaffold0001 (1 HSPs)
scaffold0001 (38-219)||(114870-115052)
[»] scaffold0585 (1 HSPs)
scaffold0585 (19-219)||(6456-6657)
[»] scaffold0235 (2 HSPs)
scaffold0235 (19-219)||(10877-11078)
scaffold0235 (19-219)||(21091-21292)
[»] scaffold0106 (1 HSPs)
scaffold0106 (20-144)||(32170-32295)
[»] scaffold0403 (1 HSPs)
scaffold0403 (20-219)||(3476-3676)
[»] scaffold0149 (2 HSPs)
scaffold0149 (23-219)||(6660-6858)
scaffold0149 (23-219)||(11091-11289)
[»] scaffold0249 (1 HSPs)
scaffold0249 (20-179)||(1393-1553)
[»] scaffold0239 (1 HSPs)
scaffold0239 (24-219)||(12211-12406)
[»] scaffold0192 (1 HSPs)
scaffold0192 (20-179)||(27249-27409)
[»] scaffold0232 (1 HSPs)
scaffold0232 (58-203)||(2336-2482)
[»] scaffold0523 (1 HSPs)
scaffold0523 (20-219)||(554-754)
[»] scaffold0465 (1 HSPs)
scaffold0465 (19-194)||(654-830)
[»] scaffold0309 (1 HSPs)
scaffold0309 (20-179)||(10518-10678)
[»] scaffold0108 (1 HSPs)
scaffold0108 (20-211)||(47817-48009)
[»] scaffold0026 (1 HSPs)
scaffold0026 (24-179)||(28782-28938)
[»] scaffold0090 (2 HSPs)
scaffold0090 (19-219)||(19534-19735)
scaffold0090 (19-219)||(23696-23897)
[»] scaffold0028 (2 HSPs)
scaffold0028 (19-219)||(49934-50135)
scaffold0028 (126-185)||(106101-106160)
[»] scaffold0072 (1 HSPs)
scaffold0072 (71-219)||(49457-49606)
[»] scaffold0124 (2 HSPs)
scaffold0124 (19-107)||(12996-13084)
scaffold0124 (118-219)||(11573-11674)
[»] scaffold0077 (1 HSPs)
scaffold0077 (20-101)||(20862-20943)
[»] scaffold2094 (1 HSPs)
scaffold2094 (19-174)||(482-637)
[»] scaffold0708 (1 HSPs)
scaffold0708 (20-108)||(7566-7654)
[»] scaffold0244 (1 HSPs)
scaffold0244 (20-144)||(18108-18233)
[»] scaffold0234 (1 HSPs)
scaffold0234 (19-165)||(24492-24638)
[»] scaffold0100 (1 HSPs)
scaffold0100 (20-185)||(25140-25306)
[»] scaffold0130 (1 HSPs)
scaffold0130 (19-219)||(10228-10429)
[»] scaffold0483 (1 HSPs)
scaffold0483 (19-177)||(12221-12380)
[»] scaffold0064 (2 HSPs)
scaffold0064 (38-219)||(28207-28389)
scaffold0064 (38-219)||(40198-40380)
[»] scaffold0068 (1 HSPs)
scaffold0068 (19-75)||(34018-34074)
[»] scaffold0600 (1 HSPs)
scaffold0600 (19-73)||(4608-4662)


Alignment Details
Target: scaffold0190 (Bit Score: 166; Significance: 5e-89; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 32739 - 32940
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-g 117  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |    
T  32739 acatcagaagcctgcagggttgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtgacaagtttaccaaacactccg 32838  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  32839 agagggcatgatgccatttgggttgctatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttacccggtagcacagttggtagaga 32938  T
Q  218 tt 219  Q
    ||    
T  32939 tt 32940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 154; Significance: 7e-82; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 29303286 - 29303487
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||| ||||||||||||| ||    
T  29303286 acatcagaagcctgcagggttgttgacaccgttggatgtaccggagtggaagtgggatagtatctctatggatttcgtgacgaatttaccaaacacttcg 29303385  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  29303386 agagggcatgatgccatttgggttgttgtcgaccggttgacgaagtcggcacatttcattcctattaatatcagttattcggtagcacaattggcagaga 29303485  T
Q  218 tt 219  Q
    ||    
T  29303486 tt 29303487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 16271085 - 16271285
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-ga 118  Q
    ||||||||||||| | | |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||||||| ||    
T  16271085 catcagaagcctgcaaggttgttgacaccgttagatgtaccggagtggaagtgggacagtatctctatggattttgtgacgagtttaccgaacactccga 16271184  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||||| || |||||||||||| ||||||||||||||||||||||||| |||||||| |||||| |||||||| ||||||||||||||||||||||    
T  16271185 gagggcatgacgctatttgggttgttgtcgaccggttgacgaagtcggcacacttcattccgattaatatcagttacccggtagcacagttggcagagat 16271284  T
Q  219 t 219  Q
    |    
T  16271285 t 16271285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 6680031 - 6679831
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-ga 118  Q
    |||||||||| || ||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||||||| ||    
T  6680031 catcagaagcatgcagggttgttgacaccgttagatgtaccggagtggaagtgggacagtatctctatggattttgtgacgagtttaccgaacactccga 6679932  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||||| || |||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||  ||||||| ||||||||||||||    
T  6679931 gagggcatgacgctatttgggttgttgtcgaccggttgacgaagtcggcacacttcattcctattaatatcagttatccggtagcgcagttggcagagat 6679832  T
Q  219 t 219  Q
    |    
T  6679831 t 6679831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 12305678 - 12305478
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||  ||||| |||||| |||    
T  12305678 catcagaagcctgcagggttgttgacaccgttggatgtaccggagtggaagtgggacagtatctctatggatttcgtgacgaccttaccgaacactccga 12305579  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    ||||| ||||  | ||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||    
T  12305578 gagggtatgacactatttgagttgttgtcgaccggttgacgaagtcggcacatttcattcctattaatatcagttatccggtagcacagttggcagagat 12305479  T
Q  219 t 219  Q
    |    
T  12305478 t 12305478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 14566062 - 14565862
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||| |||||| |||    
T  14566062 catcagaagcctgcagggttgttgacaccgttagatgtaccggagtggaagtgggacagtatctctatggattttgtgacgagtttaccgaacactccga 14565963  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||||| || |||||||| ||| |||| |||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||| ||||||||    
T  14565962 gagggcatgacgctatttgggtagttgtcgatcggttgacgaagtcggcacatttcattcctattaatatcagttatccggtagcacagttagcagagat 14565863  T
Q  219 t 219  Q
    |    
T  14565862 t 14565862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 803534 - 803734
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-ga 118  Q
    ||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||| |||| |||||| || ||||||||||| ||||||| ||    
T  803534 catcagaagcctgcagggttgttgacaccgttagatgtaccggagtggaagtgggacagtatctctacggattttgtgacgagtttaccgaacactccga 803633  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    | |||||||| || |||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||  ||||||| ||||||||||||||    
T  803634 gggggcatgacgctatttgggttgttgtcgaccggttgacgaagtcggcacacttcattcctattaatatcagttatccggtagcgcagttggcagagat 803733  T
Q  219 t 219  Q
    |    
T  803734 t 803734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 6604578 - 6604378
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-ga 118  Q
    |||||||||| || ||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||||||| ||    
T  6604578 catcagaagcatgcagggttgttgacaccgttagatgtaccggagtggaagtgggacagtatctctatggattttgtgacgagtttaccgaacactccga 6604479  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||| ||| |||||||  ||||||| ||||| ||||||||    
T  6604478 gagggcatgatgctatttgggttgttgtcgaccggttgacgaagtcggcacacttcattcctatcaatatcagttatccggtagcgcagttagcagagat 6604379  T
Q  219 t 219  Q
    |    
T  6604378 t 6604378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 31416335 - 31416535
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-ga 118  Q
    ||||||||||||| ||| |||||||||||||| ||||| ||||||||||||||||| || |||||||||||||| || ||||||||||| | ||||| ||    
T  31416335 catcagaagcctgcagggttgttgacaccgttagatgtgccggagtggaagtgggatagcatttctatggattttgtgacgagtttaccgagcactccga 31416434  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    ||||||||||||||||||||||| || ||||| ||||||||||||||||||| |||||||| |||||| |||||||  |||||||||||||||| |||||    
T  31416435 gagggcatgatgccatttgggttattgtcgacaggttgacgaagtcggcacacttcattccgattaatatcagttatccggtagcacagttggcggagat 31416534  T
Q  219 t 219  Q
    |    
T  31416535 t 31416535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 27355468 - 27355268
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-ga 118  Q
    ||||||||||||| ||| || ||||||||||| ||||||| ||||||||||||||||||||| ||||||||||| || |||| |||||| ||||||| ||    
T  27355468 catcagaagcctgcagggtttttgacaccgttagatgtactggagtggaagtgggacagtatctctatggattttgtgacgaatttaccgaacactccga 27355369  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||| |||| |||||||| || ||| |||||||  |||||| |||||||||||||||    
T  27355368 gagggcatgacgccatttgggttgttgtcgaccggttgacgaagtcgacacacttcattcccatcaatatcagttatccggtagaacagttggcagagat 27355269  T
Q  219 t 219  Q
    |    
T  27355268 t 27355268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 1267158 - 1266958
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-ga 118  Q
    ||||||||||||| ||| |||||||||||||||||||| ||||||||||| ||||| || ||||||||||||||||| |||||||||||||||||||  |    
T  1267158 catcagaagcctgcagggttgttgacaccgttggatgtgccggagtggaaatgggatagcatttctatggatttcgtgacgagtttaccaaacactctta 1267059  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||| || ||| | || ||||||||  ||||| |||||||||||||||| || || ||||| |||||| |||||||  | |||||||||||||| |||||    
T  1267058 gaggacacgattctatatgggttgtggtcgacaggttgacgaagtcggcgcactttattccgattaatatcagttatcctgtagcacagttggcggagat 1266959  T
Q  219 t 219  Q
    |    
T  1266958 t 1266958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 23655847 - 23655647
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| ||| || || |||||||| ||||| |||||||||||||||||||  ||||| |||||||| |||||||||||||| |||||| |||    
T  23655847 catcagaagcctgcagggttattaacaccgttagatgtgccggagtggaagtgggacaacatttccatggattttgtaacgagtttaccgaacactccga 23655748  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||||||||||||||||| ||| ||||| ||||||||||||||||||| ||||||   |||||| | |||||  |||||||  ||||||| |||||    
T  23655747 gagggcatgatgccatttgggtagttgtcgacaggttgacgaagtcggcacacttcattttgattaatattagttatccggtagcttagttggcggagat 23655648  T
Q  219 t 219  Q
    |    
T  23655647 t 23655647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 23 - 219
Target Start/End: Original strand, 31570706 - 31570903
Alignment:
Q  23 cagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cgagag 121  Q
    ||||| |||| ||||||||||||||| |||||||||||||||||||| ||||| || |||||||||||||| || |||||||||||||||||| |||| |    
T  31570706 cagaaacctgcaggattgttgacaccattggatgtaccggagtggaaatgggatagcatttctatggattttgtgacgagtttaccaaacactccgaggg 31570805  T
Q  122 ggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagatt 219  Q
    | |||||| | |||||||||||  | ||  |||||||||||||||||||||| |||||||| ||  | ||||| |||||||| |||||||| ||||||    
T  31570806 gacatgattcgatttgggttgtggttgataggttgacgaagtcggcacattttattcctatcaacattagttattcggtagctcagttggctgagatt 31570903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 20975511 - 20975712
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||  |||||||||||||||||||| ||||||||||| ||||| || |||||||||||||| || |||| ||||||| | ||| ||    
T  20975511 acatcagaagcctgcagtgttgttgacaccgttggatgtgccggagtggaaatgggatagcatttctatggattttgtgacgaatttaccacatactccg 20975610  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    |||||||||||| | || ||||||||  ||||| |||||||||||||||| || |||||||| |||||| |||||||  || |||| |||||||| ||||    
T  20975611 agagggcatgattctatatgggttgtggtcgacaggttgacgaagtcggcgcacttcattccgattaatatcagttatccgatagctcagttggcggaga 20975710  T
Q  218 tt 219  Q
    ||    
T  20975711 tt 20975712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 215
Target Start/End: Complemental strand, 19852331 - 19852135
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactcga- 118  Q
    |||||||||| || ||| |||||||||||||| ||||| || ||||||||||||||||| ||||| |||||||| |  |||||||| || || |||| |     
T  19852331 catcagaagcatgcagggttgttgacaccgttcgatgtgccagagtggaagtgggacagcatttccatggattttgagacgagtttgccgaatactccaa 19852232  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcaga 215  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||| |||||| ||| | || ||| | ||||   |||||||||||||||||||    
T  19852231 gagggcatgatgccatttgggttgttgtcgacaggttgacgaagtcggtacattttatttcgatcaatattagttttccggtagcacagttggcaga 19852135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 215
Target Start/End: Complemental strand, 19858367 - 19858171
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactcga- 118  Q
    |||||||||| || ||| |||||||||||||| ||||| || ||||||||||||||||| ||||| |||||||| |  |||||||| || || |||| |     
T  19858367 catcagaagcatgcagggttgttgacaccgttcgatgtgccagagtggaagtgggacagcatttccatggattttgagacgagtttgccgaatactccaa 19858268  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcaga 215  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||| |||||| ||| | || ||| | ||||   |||||||||||||||||||    
T  19858267 gagggcatgatgccatttgggttgttgtcgacaggttgacgaagtcggtacattttatttcgatcaatattagttttccggtagcacagttggcaga 19858171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 22061293 - 22061494
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| || ||||||||||||||||||||||||||||| ||||| || |||||||||||||| || | |||||||||||||||| ||    
T  22061293 acatcagaagcctgcagggttattgacaccgttggatgtaccggagtggaaatgggatagcatttctatggattttgtgatgagtttaccaaacactacg 22061392  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    ||||| || ||| | || ||||||||  ||||| ||||||  |||||||| || ||||||||||||||  |||  ||  ||||||| |||||||| ||||    
T  22061393 agaggacacgattctatatgggttgtggtcgacaggttgagaaagtcggcgcacttcattcctattaacatcaagtatccggtagctcagttggcggaga 22061492  T
Q  218 tt 219  Q
    ||    
T  22061493 tt 22061494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 22051783 - 22051583
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| ||| |||||||| ||||||||||||||||||||||| ||||| || |||||||||||||| || || ||||||| ||||||| |||    
T  22051783 catcagaagcctgcagggttgttgacgccgttggatgtaccggagtggaaatgggatagcatttctatggattttgtgacaagtttactaaacactccga 22051684  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    || | |||||| | |||||||||||    ||  ||||||| |||||||||||||| |||||||| ||  |||||||  ||||||| |||||||| |||||    
T  22051683 gaagacatgattctatttgggttgtgggtgataggttgacaaagtcggcacattttattcctatcaacatcagttatccggtagctcagttggctgagat 22051584  T
Q  219 t 219  Q
    |    
T  22051583 t 22051583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 19 - 179
Target Start/End: Complemental strand, 22371861 - 22371700
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| |||||||||||||| ||||| || ||||||||||||||||  ||||| |||||||| || ||||||||||| || ||| |     
T  22371861 acatcagaagcctgcagggttgttgacaccgttagatgtgcctgagtggaagtgggacaacatttccatggattttgtgacgagtttaccgaatactcca 22371762  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcc 179  Q
    ||||||||||||||||||||||| ||| | ||  |||||||||||||||| ||||| |||||    
T  22371761 agagggcatgatgccatttgggtagttgttgataggttgacgaagtcggcgcattttattcc 22371700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 24 - 179
Target Start/End: Complemental strand, 21841333 - 21841177
Alignment:
Q  24 agaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cgagagg 122  Q
    ||||||||| ||| |||||||||||||| ||||| || ||||||||||||||||  ||||| |||||||| || |||||||| || || ||| |||||||    
T  21841333 agaagcctgcagggttgttgacaccgttagatgtgccagagtggaagtgggacaacatttccatggattttgtgacgagtttgccgaatactccgagagg 21841234  T
Q  123 gcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcc 179  Q
    |||||||||||||||||| ||  ||||  ||||||||||||||||||| || |||||    
T  21841233 gcatgatgccatttgggtggtggtcgataggttgacgaagtcggcacactttattcc 21841177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 20009780 - 20009922
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| ||| ||||||||||| || ||||| || ||||||||||||||||  ||||| |||||||| || |||||||| || || ||| | |    
T  20009780 catcagaagcctgcagggttgttgacaccattagatgtgccagagtggaagtgggacaacatttccatggattttgtgacgagtttgccgaatactccaa 20009879  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaa 161  Q
    ||||| |||||||||||||||||||| |||| |||||||||||    
T  20009880 gagggaatgatgccatttgggttgttgtcgatcggttgacgaa 20009922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 179
Target Start/End: Complemental strand, 20389020 - 20388859
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-g 117  Q
    ||||||||||||||  || ||||||||||| || ||||| ||||||||||| ||||| || || || |||||||  || || |||||||| || |||| |    
T  20389020 acatcagaagcctgctgggttgttgacaccattagatgtgccggagtggaaatgggatagcatatccatggattgtgtgacaagtttaccgaatactccg 20388921  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcc 179  Q
    ||||||||||||||||||||||| ||| | ||  | ||||||||||||||||| || |||||    
T  20388920 agagggcatgatgccatttgggtagttgttgatagattgacgaagtcggcacactttattcc 20388859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 193
Target Start/End: Original strand, 20395986 - 20396160
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    |||||||| ||||  || |||||||||||||| ||||| || ||||| || ||||| ||||| || |||||||| || |||||||| || || ||| | |    
T  20395986 catcagaaacctgctgggttgttgacaccgttagatgtgccagagtgaaaatgggatagtatatccatggattttgtgacgagtttgccgaatactccaa 20396085  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagtt 193  Q
    |||||||||  || ||||||||  || | ||  | || |||||||| || |||||||||||  ||||| ||||||    
T  20396086 gagggcatgccgctatttgggtgattgtggatagattaacgaagtcagctcatttcattccggttaatatcagtt 20396160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 22366640 - 22366692
Alignment:
Q  133 atttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaa 185  Q
    |||||||||||| | || | ||||||||||| ||||||||| |||||||||||    
T  22366640 atttgggttgttgttgatcagttgacgaagttggcacattttattcctattaa 22366692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 150; Significance: 2e-79; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 23079688 - 23079889
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-g 117  Q
    |||||||||||||| ||| |||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||| |    
T  23079688 acatcagaagcctgcagggttgttgacaccgttggatgtgccggagtggaagtcggacaatatttctatggatttcgtgacgagtttaccaaacactccg 23079787  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||  |||||||||||||||||||||    
T  23079788 agagggcatgatgccatttgggttgttgtcgaccggttgacgaagtcggcacatttcattcatattaatatcagttatccggtagcacagttggcagaga 23079887  T
Q  218 tt 219  Q
    ||    
T  23079888 tt 23079889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 22503447 - 22503247
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-ga 118  Q
    ||||||||||||| ||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||| ||||||| ||    
T  22503447 catcagaagcctgcagggttgttgtcaccgttggatgtatcggagtggaagtgggacagtatttctatggattttgtgacgagtttaccgaacactccga 22503348  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
     ||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||    
T  22503347 aagggcatgacgctatttgggttgttgtcgaccggttgacgaagtcggcacatttcattcctattaatatcagttatccggtagcacagttggcagagat 22503248  T
Q  219 t 219  Q
    |    
T  22503247 t 22503247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 24797997 - 24798197
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||| || |||||||| |||||||||||||| |||||| |||    
T  24797997 catcagaagcctgcagggttgttgacaccgttagatgtaccggagtggaagtgggacagtatctccatggattttgtaacgagtttaccgaacacttcga 24798096  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
     ||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||| ||||||||    
T  24798097 aaggacatgatgccatttgggtagttgtcgaccggttgacgaagtcggcacatttcattcctattaatatcagttatccggtagcacagttagcagagat 24798196  T
Q  219 t 219  Q
    |    
T  24798197 t 24798197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 14886591 - 14886791
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||| || |||||||| |||||||||||||| |||||| |||    
T  14886591 catcagaagcctgcagggttgttgacaccgttagatgtaccggagtggaagtgggacagtatctccatggattttgtaacgagtttaccgaacacttcga 14886690  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
     ||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||| ||||| ||||||||    
T  14886691 aaggacatgatgccatttgggtagttgtcgaccggttgacgaagtcggcacatttcattcctattaatatcagttatccggtagcgcagttagcagagat 14886790  T
Q  219 t 219  Q
    |    
T  14886791 t 14886791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 24619895 - 24620095
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||| | ||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||| |||||||| |||    
T  24619895 catcagaagcccgcagggttgttgacaccgttggatgtaccggagtggaaatgggacattatttctatggatttcgtgacgagtttagcaaacactccga 24619994  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| || ||| | |||||  |||||||| |||||||||||||    
T  24619995 gagggcatgatgccatttgggttgttgtcgatcggttgacgaagtcggcacatttcattccaataaatattagttatccggtagcagagttggcagagat 24620094  T
Q  219 t 219  Q
    |    
T  24620095 t 24620095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 24716126 - 24716326
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||| | ||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||| |||||||| |||    
T  24716126 catcagaagcccgcagggttgttgacaccgttggatgtaccggagtggaaatgggacattatttctatggatttcgtgacgagtttagcaaacactccga 24716225  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| || ||| | |||||  |||||||| |||||||||||||    
T  24716226 gagggcatgatgccatttgggttgttgtcgatcggttgacgaagtcggcacatttcattccaataaatattagttatccggtagcagagttggcagagat 24716325  T
Q  219 t 219  Q
    |    
T  24716326 t 24716326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 24749154 - 24749354
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-ga 118  Q
    ||||||||||| | ||| |||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||| ||||||||| ||||||||| ||    
T  24749154 catcagaagcccgcagggttgttgacaccgttggatgtactggagtggaaatgggacattatttctatggatttcgtgacgagtttagcaaacactccga 24749253  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| || ||| | |||||  |||||||| |||||||||||||    
T  24749254 gagggcatgatgccatttgggttgttgtcgatcggttgacgaagtcggcacatttcattccaataaatattagttatccggtagcagagttggcagagat 24749353  T
Q  219 t 219  Q
    |    
T  24749354 t 24749354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 37542981 - 37543181
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-ga 118  Q
    ||||||||||||| ||| |||||||||||||| |||||||| |||||||||||||||| ||| ||||||||||| |||||||||||||| ||||||| ||    
T  37542981 catcagaagcctgcagggttgttgacaccgttagatgtaccagagtggaagtgggacattatctctatggattttgtaacgagtttaccgaacactccga 37543080  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||||| || |||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||  ||||||| ||||| ||||||||    
T  37543081 gagggcatgacgctatttgggttgttgtcgaccggttgacaaagtcggcacatttcattcctattaatatcagttatccggtagcgcagttagcagagat 37543180  T
Q  219 t 219  Q
    |    
T  37543181 t 37543181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 25848843 - 25848643
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||| |||||| |||    
T  25848843 catcagaagcctgcagggttgttgacaccgttggatgtaccggagtggaagtgggacagtatctctatggattttgtgacgagtttaccgaacactccga 25848744  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    ||| |||||| || |||||||||||| |||||||||||| |||||||||||| || |||||||| ||| |||||||  | ||||||||||||||||||||    
T  25848743 gagagcatgacgctatttgggttgttgtcgaccggttgatgaagtcggcacactttattcctatcaatatcagttatccagtagcacagttggcagagat 25848644  T
Q  219 t 219  Q
    |    
T  25848643 t 25848643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 19 - 219
Target Start/End: Complemental strand, 20343051 - 20342850
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| || ||||||||||| |||||| ||    
T  20343051 acatcagaagcctgcagggttgttgacaccgttggacgtaccggagtggaagtgggacagtatctctatggattttgtgacgagtttaccgaacactccg 20342952  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    ||||||||||| || |||||||| ||| |||||||||||| |||||||||||| ||||||||||| ||| |||||||  ||||||| ||||| |||||||    
T  20342951 agagggcatgacgctatttgggtcgttgtcgaccggttgaggaagtcggcacacttcattcctatcaatatcagttatccggtagcgcagttagcagaga 20342852  T
Q  218 tt 219  Q
    ||    
T  20342851 tt 20342850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 22235519 - 22235720
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||||| || || |||||||||||||| || ||||||||||| |||||| ||    
T  22235519 acatcagaagcctgtagggttgttgacaccgttggatgtgccggagtggaagtgagatagcatttctatggattttgtgacgagtttaccgaacactccg 22235618  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    |||||||||||||| || | ||||||  ||||| |||||||||||||||| || || ||||| |||||| | ||||| ||||||||  ||||||| ||||    
T  22235619 agagggcatgatgctatattggttgtggtcgacaggttgacgaagtcggcgcactttattccgattaatattagttattcggtagcttagttggcggaga 22235718  T
Q  218 tt 219  Q
    ||    
T  22235719 tt 22235720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 17268934 - 17269134
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    |||||||| |||| ||||||||||||||||||||||||||| |||||||| ||||| || |||||||||||||| || || ||||||||||||||| |||    
T  17268934 catcagaaacctgcaggattgttgacaccgttggatgtaccagagtggaaatgggatagcatttctatggattttgtgacaagtttaccaaacactccga 17269033  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    | || |||||| | |||||||||||  | ||  |||||||||||||||||||||| |||||||| ||  |||||||  | ||||| |||||||| |||||    
T  17269034 ggggacatgattcgatttgggttgtggttgataggttgacgaagtcggcacattttattcctatcaacatcagttatccagtagctcagttggctgagat 17269133  T
Q  219 t 219  Q
    |    
T  17269134 t 17269134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 212
Target Start/End: Complemental strand, 20822222 - 20822028
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||| |||||  ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| || |||||||| || ||| ||    
T  20822222 acatcagaggcctgcgggattgttgacaccgttggatgtaccggagtggaaatgggatagtatttctatggatttcgtgacaagtttacctaatactccg 20822123  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggc 212  Q
    ||||| |||||| | || ||||||||  | ||| |||||||||||||||| || |||||||| |||||| | |||||  | ||||| ||||||||    
T  20822122 agaggacatgattctatatgggttgtagttgacaggttgacgaagtcggcgcacttcattccgattaatataagttatccagtagctcagttggc 20822028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 21890359 - 21890559
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| ||| |||||||||||||| ||||| || ||||||||||||||||  ||||| |||||||| || |||||||||| ||| ||| |||    
T  21890359 catcagaagcctgaagggttgttgacaccgttagatgtgccagagtggaagtgggacaacatttccatggattttgtgacgagtttacaaaatactccga 21890458  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||||||||||||||||||||| || |  |||||||||||||| |||| || ||||| || ||| | ||||   ||||||| |||||||| |||||    
T  21890459 gagggcatgatgccatttgggttgttgtctataggttgacgaagtcgacacactttattccgatcaatattagttttccggtagctcagttggcggagat 21890558  T
Q  219 t 219  Q
    |    
T  21890559 t 21890559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 79 - 219
Target Start/End: Complemental strand, 22381908 - 22381767
Alignment:
Q  79 tatttctatggatttcgtaacgagtttaccaaacactc-gagagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcatt 177  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |  | ||  ||||||||||||||||||| ||||||    
T  22381908 tatttctatggatttcgtgacgagtttaccaaacactccgagagggcatgatgccatttgggttctggttgataggttgacgaagtcggcacacttcatt 22381809  T
Q  178 cctattaatgtcagttactcggtagcacagttggcagagatt 219  Q
    ||||||||  |||||||  ||||||| |||||||| ||||||    
T  22381808 cctattaacatcagttatccggtagctcagttggctgagatt 22381767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 218
Target Start/End: Complemental strand, 20774528 - 20774328
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacac-tcg 117  Q
    |||||||| ||| | ||| |||||||||||||||||||||||||||||||| ||||| || |||||||||||||| ||  | |||||||| || || |||    
T  20774528 acatcagaggcccgcaggtttgttgacaccgttggatgtaccggagtggaaatgggatagcatttctatggattttgtgtcaagtttacctaatacttcg 20774429  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    ||||| |||||| | || ||||||||  | ||| |||||||||||||||| || |||||||| |||||| |||||||  | ||||| |||||||| ||||    
T  20774428 agaggacatgattcgatatgggttgtggtagacaggttgacgaagtcggcgcacttcattccgattaatatcagttatccagtagctcagttggcggaga 20774329  T
Q  218 t 218  Q
    |    
T  20774328 t 20774328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 218
Target Start/End: Complemental strand, 22462721 - 22462521
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||| ||||| ||| ||||||||||||||||| ||||| |||||||| ||||| |  |||||||||||||| || || |||||||| || ||| ||    
T  22462721 acatcagaggcctgcaggtttgttgacaccgttggaggtaccagagtggaaatgggatatcatttctatggattttgtgacaagtttacctaatactccg 22462622  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    |||||||||||| | || ||||||||  | ||| |||||||||||||||| || |||||||| |||||| |||||||  | ||||| |||||||| ||||    
T  22462621 agagggcatgattcgatatgggttgtggtagacaggttgacgaagtcggcgcacttcattccgattaatatcagttatccagtagctcagttggcggaga 22462522  T
Q  218 t 218  Q
    |    
T  22462521 t 22462521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 212
Target Start/End: Original strand, 28894541 - 28894735
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||| ||| | ||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || || ||||| || || ||| ||    
T  28894541 acatcagaggcccgcaggtttgttgacaccgttggatgtaccggagtggaaatgggatagtatttctatggattttgtgacaagtttgcctaatactccg 28894640  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggc 212  Q
    ||||| |||||| | || ||||||||  | ||  |||||||||||||||| || |||||||| |||||| |||||||  | ||||| ||||||||    
T  28894641 agaggacatgattcgatatgggttgtggttgataggttgacgaagtcggcgcacttcattccgattaatatcagttatccagtagctcagttggc 28894735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 212
Target Start/End: Original strand, 28916012 - 28916206
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||| ||| | ||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || || ||||| || || ||| ||    
T  28916012 acatcagaggcccgcaggtttgttgacaccgttggatgtaccggagtggaaatgggatagtatttctatggattttgtgacaagtttgcctaatactccg 28916111  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggc 212  Q
    ||||| |||||| | || ||||||||  | ||  |||||||||||||||| || |||||||| |||||| |||||||  | ||||| ||||||||    
T  28916112 agaggacatgattcgatatgggttgtggttgataggttgacgaagtcggcgcacttcattccgattaatatcagttatccagtagctcagttggc 28916206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 212
Target Start/End: Original strand, 28923367 - 28923561
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||| ||| | ||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || || ||||| || || ||| ||    
T  28923367 acatcagaggcccgcaggtttgttgacaccgttggatgtaccggagtggaaatgggatagtatttctatggattttgtgacaagtttgcctaatactccg 28923466  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggc 212  Q
    ||||| |||||| | || ||||||||  | ||  |||||||||||||||| || |||||||| |||||| |||||||  | ||||| ||||||||    
T  28923467 agaggacatgattcgatatgggttgtggttgataggttgacgaagtcggcgcacttcattccgattaatatcagttatccagtagctcagttggc 28923561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 21563572 - 21563773
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    ||||||||| | ||| || ||||||||||| |||||||| ||||||||||| ||||| || || || |||||||| || || |||||||| || ||| |     
T  21563572 acatcagaaacttgttgggttgttgacaccattggatgtgccggagtggaaatgggatagcatatccatggattttgtgacaagtttaccgaatactcca 21563671  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    |||||||| |||||||||||||| ||| | ||  | |||||||||||||| ||||| ||||| |||||| | ||||   |||| || |||||||| ||||    
T  21563672 agagggcacgatgccatttgggtagttgttgatagattgacgaagtcggcgcattttattccgattaatattagttttccggtggctcagttggcggaga 21563771  T
Q  218 tt 219  Q
    ||    
T  21563772 tt 21563773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 21831360 - 21831482
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-g 117  Q
    |||||||||||||   || |||||||||||||| ||||| |||||||| || || || || || |  |||||||| ||||| || ||||| || |||| |    
T  21831360 acatcagaagcctactgggttgttgacaccgttagatgtgccggagtgaaaatgagatagcatatgcatggattttgtaacaagattaccgaatactccg 21831459  T
Q  118 agagggcatgatgccatttgggt 140  Q
    |||||||||||||||||||||||    
T  21831460 agagggcatgatgccatttgggt 21831482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 21680377 - 21680433
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtggga 75  Q
    ||||||||| |||| ||| ||||||||||| |||||||||||||||||||| |||||    
T  21680377 acatcagaaacctgcagggttgttgacaccattggatgtaccggagtggaaatggga 21680433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 21496841 - 21496783
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacag 78  Q
    ||||| ||||||| ||| |||||||||||||| ||||| || ||||||||||| |||||    
T  21496841 catcaaaagcctgcagggttgttgacaccgttagatgtgccagagtggaagtgagacag 21496783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 173
Target Start/End: Original strand, 22332520 - 22332641
Alignment:
Q  53 gatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cgagagggcatgatgccatttgggttgttatcgacc 151  Q
    ||||| ||||| ||||||||||| ||||| || |||||||| || |||||||| ||||| ||| | |||||| | || || ||||||||| || | ||      
T  22332520 gatgtgccggaatggaagtgggatagtatatccatggattttgtgacgagtttgccaaatactcctagagggaacgacgcaatttgggttattgttgata 22332619  T
Q  152 ggttgacgaagtcggcacattt 173  Q
    | |||||||||||||| |||||    
T  22332620 gattgacgaagtcggctcattt 22332641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 19566403 - 19566455
Alignment:
Q  133 atttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaa 185  Q
    |||||||||||| | || | ||||||||||||| ||||||| |||||||||||    
T  19566403 atttgggttgttgttgatcagttgacgaagtcgacacattttattcctattaa 19566455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 24 - 219
Target Start/End: Complemental strand, 43664 - 43468
Alignment:
Q  24 agaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cgagagg 122  Q
    ||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  43664 agaagcctgcatggttgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtgacgagtttaccaaacactccgagagg 43565  T
Q  123 gcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagatt 219  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||   ||||||||||||||||||||||    
T  43564 gcatgatgtcatttgggttgttgtcgaccggttgacgaagtcggcacacttcattcctattaatatcagttatctggtagcacagttggcagagatt 43468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 145; Significance: 2e-76; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 20295281 - 20295081
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-ga 118  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||| |||||||||||||| ||||||| ||    
T  20295281 catcagaagcctgcagggttgttgacaccgttggatgtaccggactggaagtgggacattatctctatggattttgtaacgagtttaccgaacactccga 20295182  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||||| || ||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  20295181 gagggcatgacgctatttgggttattgtcgaccggttgacgaagtcggcacatttcattcctattaatatcagttactcggtagcacagttggcagagat 20295082  T
Q  219 t 219  Q
    |    
T  20295081 t 20295081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 31539487 - 31539687
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-ga 118  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||| || ||||||| ||    
T  31539487 catcagaagcctgcagggttgttgacaccgttggatgtaccggagtggaagtgggacagtatctctatggattttgtgacgagtttgccgaacactccga 31539586  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    | |||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||| ||||||||||||||    
T  31539587 gggggcatgacgctatttgggttgttgtcgaccggttgacgaagtcggcacatttcattcctattaatatcagttatccggtagcgcagttggcagagat 31539686  T
Q  219 t 219  Q
    |    
T  31539687 t 31539687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 37677949 - 37677749
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-ga 118  Q
    ||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||| ||||| |||||||| ||||||| ||    
T  37677949 catcagaagcctgcagggttgttgacaccgttagatgtaccggagtggaagtgggatagtatctctatggattttgtaactagtttaccgaacactccga 37677850  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||| ||||| ||||||||    
T  37677849 gagggcatgacgctatttgggttgttgtcgaccggttgacgaagtcggcacatttcattcctattaatatcagttatccggtagcgcagttagcagagat 37677750  T
Q  219 t 219  Q
    |    
T  37677749 t 37677749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 24099093 - 24099293
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| ||| |||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||| || || |||||||| |||||| |||    
T  24099093 catcagaagcctgcagggttgttgacaccgttagatgtgccggagtggaaatgggacagtatttctatggattttgtgacaagtttaccgaacactacga 24099192  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    ||||||||||||| ||||||||| || ||||| |||||||||||||||||||||||||||| || ||| |||||||  |||||||||||||||| |||||    
T  24099193 gagggcatgatgctatttgggttattgtcgacaggttgacgaagtcggcacatttcattccaatcaatatcagttatccggtagcacagttggcggagat 24099292  T
Q  219 t 219  Q
    |    
T  24099293 t 24099293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 20835377 - 20835578
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||| || |||||||||||||| || ||||||||||| |||||| ||    
T  20835377 acatcagaagcctgcagggttgttgacaccgttggatgtgccggagtggaagtgggatagcatttctatggattttgtgacgagtttacctaacactccg 20835476  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    |||||||||||||| || ||||||||  |||||  |||||| |||||| | ||||| ||||| |||||| |||||||  ||||||| |||||||| ||||    
T  20835477 agagggcatgatgctatatgggttgtggtcgacatgttgacaaagtcgacgcattttattccgattaatatcagttatccggtagctcagttggcggaga 20835576  T
Q  218 tt 219  Q
    ||    
T  20835577 tt 20835578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 22432605 - 22432806
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| ||||||||||||||||||||||| |||||||| ||||| || |||||||||||||| || |||||||||||||||||| ||    
T  22432605 acatcagaagcctgcagggttgttgacaccgttggatgtaccagagtggaaatgggatagcatttctatggattttgtgacgagtttaccaaacactccg 22432704  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    ||||||||| || | || ||||||||  ||||  ||||||| ||||||||||| ||||||||||||||  |||||||  ||||||| |||||||| ||||    
T  22432705 agagggcataattctatatgggttgtggtcgataggttgacaaagtcggcacacttcattcctattaacatcagttatccggtagctcagttggctgaga 22432804  T
Q  218 tt 219  Q
    ||    
T  22432805 tt 22432806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 20939552 - 20939753
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||   ||||||||||||||| || ||||||||||| ||| || ||    
T  20939552 acatcagaagcctgcagggttgttgacaccgttggatgtgccggagtggaagtgggattttatttctatggattttgtgacgagtttaccgaacgctccg 20939651  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    |||||||||||||| || ||||||||  ||||| |||||||||||||| | || || ||| | |||||| ||| ||| |||||||| |||||||| ||||    
T  20939652 agagggcatgatgctatatgggttgtggtcgacaggttgacgaagtcgacgcactttatttcgattaatatcaattattcggtagctcagttggcggaga 20939751  T
Q  218 tt 219  Q
    ||    
T  20939752 tt 20939753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 19662626 - 19662831
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgt----accggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacac 114  Q
    |||||||||||||| ||  ||||||||||||||||||||     ||||||||||||||| | || |||| ||||||||| |||||||||||||| |||||    
T  19662626 acatcagaagcctgcagagttgttgacaccgttggatgtgccggccggagtggaagtggtatagcatttttatggattttgtaacgagtttaccgaacac 19662725  T
Q  115 t-cgagagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggca 213  Q
    | |||||||||||||||| || ||||||||  ||||| ||||||||||||||||||| || ||||| |||||| |||||||  ||||||| ||||||||     
T  19662726 tccgagagggcatgatgctatgtgggttgtggtcgacaggttgacgaagtcggcacactttattccgattaatatcagttatccggtagctcagttggcg 19662825  T
Q  214 gagatt 219  Q
    ||||||    
T  19662826 gagatt 19662831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 19855174 - 19855050
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    |||||||||||||  || |||||||||||||||||||| || |||||||||||||| || |||||||||||||| || ||||||||||| |||||| |||    
T  19855174 catcagaagcctgcggggttgttgacaccgttggatgtgccagagtggaagtgggatagcatttctatggattttgtgacgagtttaccgaacactccga 19855075  T
Q  119 gagggcatgatgccatttgggttgt 143  Q
    ||||||||||||| || ||||||||    
T  19855074 gagggcatgatgctatatgggttgt 19855050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 19 - 218
Target Start/End: Original strand, 20856250 - 20856450
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||| ||||| ||| ||||||||||||||||| ||||| |||||||| ||||| |  |||||||||||||| || || |||||||| || ||| ||    
T  20856250 acatcagaggcctgcaggtttgttgacaccgttggaggtaccagagtggaaatgggatatcatttctatggattttgtgacaagtttacctaatactccg 20856349  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    |||||||||||| | || ||||||||  | ||| |||||||||||||||| || |||||||  |||||| |||||||  | ||||| |||||||| ||||    
T  20856350 agagggcatgattcgatatgggttgtggtagacaggttgacgaagtcggcgcacttcattctgattaatatcagttatccagtagctcagttggcggaga 20856449  T
Q  218 t 218  Q
    |    
T  20856450 t 20856450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 21951778 - 21951682
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc 116  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||| || |||||||    
T  21951778 catcagaagcctgcagggttgttgacaccgttggatgtaccggagtggaagtgggacagtatctctatggattttgtgacgagtttgccgaacactc 21951682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 16370031 - 16369966
Alignment:
Q  154 ttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagatt 219  Q
    |||||||||||||| ||||||||||| |||||| ||||||   |  |||| |||||||||||||||    
T  16370031 ttgacgaagtcggctcatttcattccgattaatatcagttttcctatagctcagttggcagagatt 16369966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 141; Significance: 4e-74; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 12456546 - 12456346
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| | | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||| |||    
T  12456546 catcagaagcctgcatggttgttgacaccgttggatgtaccggagtggaagtgggacaatatttctatggattttgtgacgagtttaccaaacactacga 12456447  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||| |||||||  ||||||||||||||| ||||||    
T  12456446 gagggcatgatgccatttgggttgttgtcgaccggttgacgaagtcggcacacttcattcctatcaatatcagttatccggtagcacagttggtagagat 12456347  T
Q  219 t 219  Q
    |    
T  12456346 t 12456346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 49153145 - 49152945
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-ga 118  Q
    ||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||| ||    
T  49153145 catcagaagcctgcagggttgttgacaccgttagatgtaccggagtggaagtgggacagtatctctatggattttgtaacgagtttaccgaacactccga 49153046  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||| ||||||||    
T  49153045 gagggcatgacgctatttgggttgttgtcgaccggttgacgaagtcggcacatttcattcctattaatatcagttatccggtagcacagttagcagagat 49152946  T
Q  219 t 219  Q
    |    
T  49152945 t 49152945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 13022201 - 13022001
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-ga 118  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||| ||||||| ||||||||||| ||    
T  13022201 catcagaagcctgcagggttgttgacaccgttggatgtaccggagtggaaatgggatagcatttctatggatttcgtgacgagttaaccaaacactccga 13022102  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    | |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||  |||||||||||||||| |||||    
T  13022101 gggggcatgatgccatttgggttgttgtcgaccggttgacgaagtcggcacacttcattcctattaatatcagttatccggtagcacagttggcggagat 13022002  T
Q  219 t 219  Q
    |    
T  13022001 t 13022001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 11305668 - 11305868
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-ga 118  Q
    ||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||||||| ||    
T  11305668 catcagaagcctgcagggttgttgacaccgttagatgtaccggagtggaagtgggacagtatctctatggattttgtgacgagtttaccgaacactccga 11305767  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    | |||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||| ||||||||||||||    
T  11305768 gggggcatgacgctatttgggttgttgtcgaccggttgacgaagtcggcacatttcattcctattaatatcagttatccggtagcgcagttggcagagat 11305867  T
Q  219 t 219  Q
    |    
T  11305868 t 11305868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 19 - 203
Target Start/End: Complemental strand, 12457485 - 12457300
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  |||||| ||    
T  12457485 acatcagaagcctgcagggttgttgacaccgttggatgtaccggagtggaagtgggacagtatctctatggatttcgtgacgagtttacggaacactccg 12457386  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagc 203  Q
    |||||||||||||| |||| ||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||  |||||||    
T  12457385 agagggcatgatgctatttaggttgttgtagaccggttgacgaagtcggcacatttcattcctattaatatcagttatccggtagc 12457300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 13968073 - 13968273
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| || |||||||||||||||||| |||    
T  13968073 catcagaagcctgcagggttgttgacaccgttggatgtaccggactggaagtgggacagtatctctatggattttgtgacgagtttaccaaacactccga 13968172  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||||| || |||||||||||| ||||||||||||||||||||||||| || |||||||||||| | |||||  ||||||| ||||| ||||||||    
T  13968173 gagggcatgacgctatttgggttgttgtcgaccggttgacgaagtcggcacactttattcctattaatataagttatccggtagcgcagttagcagagat 13968272  T
Q  219 t 219  Q
    |    
T  13968273 t 13968273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 16949876 - 16950076
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-ga 118  Q
    ||||||||||||| ||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |||| | ||||| ||    
T  16949876 catcagaagcctgcagggttgttaacaccgttagatgtaccggagtggaagtgggacagtatttctatggatttcgtgacgagtctaccgagcactccga 16949975  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    ||||||||||||||||||||||| || ||||| ||||||||||||||||||| |||||||| |||||| |||||||  |||||||||||||||| |||||    
T  16949976 gagggcatgatgccatttgggttattgtcgacaggttgacgaagtcggcacacttcattccgattaatatcagttatccggtagcacagttggcggagat 16950075  T
Q  219 t 219  Q
    |    
T  16950076 t 16950076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 19 - 218
Target Start/End: Original strand, 14285780 - 14285980
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||    
T  14285780 acatcagaagcctgcagggttgttgacaccgttggatgtgccggagtggaagtgggacagtatttctatggattttgtaacaagtttaccaaacactccg 14285879  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    ||||| |||||| | |||||||||||  ||||| |||||||||||||| | || |||||||| |||||  |||||||  ||||||||||||| || ||||    
T  14285880 agaggacatgattctatttgggttgtggtcgacaggttgacgaagtcgacgcacttcattccgattaacatcagttatccggtagcacagttagcggaga 14285979  T
Q  218 t 218  Q
    |    
T  14285980 t 14285980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 812 - 1012
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| ||| ||||||||| |||| ||||| ||||||||||||||||||| ||||||||||||||||||  | |||||||| |||||| |||    
T  812 catcagaagcctgcagggttgttgacatcgttagatgtgccggagtggaagtgggacaatatttctatggatttcgtgccaagtttaccgaacactccga 911  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    ||||||||||||||||||||||  || ||||| ||||||||||||| |||||||||||||| || ||| |||||||   ||||||||||||||| |||||    
T  912 gagggcatgatgccatttgggtcattgtcgacaggttgacgaagtcagcacatttcattccgatcaatatcagttatctggtagcacagttggcggagat 1011  T
Q  219 t 219  Q
    |    
T  1012 t 1012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 8211533 - 8211733
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| | | |||||||||||||| |||||||||||||||||||| |||||||| ||||||||||| || |||||| |||| |||||| |||    
T  8211533 catcagaagcctgcatggttgttgacaccgttagatgtaccggagtggaagtgagacagtatctctatggattttgtgacgagtctaccgaacactccga 8211632  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||||| || |||||||| ||| ||||||||||||||||||||||||| ||||||||||| ||| |||||||  ||||||| || || ||||||||    
T  8211633 gagggcatgacgctatttgggtagttgtcgaccggttgacgaagtcggcacacttcattcctatcaatatcagttatccggtagcgcaattagcagagat 8211732  T
Q  219 t 219  Q
    |    
T  8211733 t 8211733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 19 - 219
Target Start/End: Complemental strand, 6414356 - 6414155
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||| |||||| ||    
T  6414356 acatcagaagcctgcagggttgttgacaccgttggatgtgccggagtggaagtgggatagtatttctatggattttgtgacgagtttacctaacactccg 6414257  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    |||||||||||| | || ||||||||  ||||| ||||||||||||||||||| || ||||| || ||| |||||||  || |||| ||||| |||||||    
T  6414256 agagggcatgattctatatgggttgtggtcgacaggttgacgaagtcggcacactttattccgatcaatatcagttatccgatagctcagttagcagaga 6414157  T
Q  218 tt 219  Q
    ||    
T  6414156 tt 6414155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 15102008 - 15102208
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacac-tcga 118  Q
    ||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||  |||||||||||||| || ||||||||||| ||||| ||||    
T  15102008 catcagaagcctgcagggttgttgacaccgttggatgtgccggagtggaagtgggacaacatttctatggattttgtgacgagtttaccgaacacttcga 15102107  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    || ||||||||||||||||||| ||| ||||| | ||||||||||||||||| || ||||| || ||| | |||||  ||||||| |||||||| |||||    
T  15102108 gacggcatgatgccatttgggtggttgtcgacagattgacgaagtcggcacactttattccgatcaatattagttatccggtagctcagttggcggagat 15102207  T
Q  219 t 219  Q
    |    
T  15102208 t 15102208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 20 - 215
Target Start/End: Original strand, 26118010 - 26118206
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    |||||||||||||  || |||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||| || ||||||||||| |||||| |||    
T  26118010 catcagaagcctgcggggttgttgacaccgttagatgtaccggagtggaagtgggatagtatctctatggattttgtgacgagtttaccgaacactccga 26118109  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcaga 215  Q
    | |||||||| || |||||||||||| ||||||||||||| ||||||||||| ||||||||||| ||| ||| |||  ||||||| ||||| |||||    
T  26118110 gggggcatgacgctatttgggttgttgtcgaccggttgacaaagtcggcacacttcattcctatcaatatcaattatccggtagcgcagttagcaga 26118206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 211
Target Start/End: Complemental strand, 13666382 - 13666189
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| |||||||||||| ||||||| ||||||||||||||||| || |||||||||||||| |||||||||||||| |||||| ||    
T  13666382 acatcagaagcctgcagggttgttgacaccgatggatgtgccggagtggaagtgggatagcatttctatggattttgtaacgagtttaccgaacactccg 13666283  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttgg 211  Q
    |||||||||||||| || ||||||||  ||||| ||||||| |||||||| || || ||||| || ||| |||||||  ||||||| |||||||    
T  13666282 agagggcatgatgctatatgggttgtggtcgacaggttgacaaagtcggcgcactttattccgatcaatatcagttatccggtagctcagttgg 13666189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 219
Target Start/End: Complemental strand, 14130718 - 14130517
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| |||||||||||||| ||||| ||||||||||| ||||| || |||||||||||||| || || ||||||||||||||| ||    
T  14130718 acatcagaagcctgcagggttgttgacaccgttagatgtgccggagtggaaatgggatagcatttctatggattttgtgacaagtttaccaaacactccg 14130619  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    ||||| |||||| | |||||||||||  | ||  ||||||| |||||||||||||| |||||||| ||  |||||||  ||||||| |||||||| ||||    
T  14130618 agaggacatgattctatttgggttgtggttgataggttgacaaagtcggcacattttattcctatcaacatcagttatccggtagctcagttggctgaga 14130519  T
Q  218 tt 219  Q
    ||    
T  14130518 tt 14130517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 219
Target Start/End: Complemental strand, 14434536 - 14434335
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| |||||||||||||| ||||| ||||||||||| ||||| || |||||||||||||| || || ||||||||||||||| ||    
T  14434536 acatcagaagcctgcagggttgttgacaccgttagatgtgccggagtggaaatgggatagcatttctatggattttgtgacaagtttaccaaacactccg 14434437  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    ||||| |||||| | |||||||||||  | ||  ||||||| |||||||||||||| |||||||| ||  |||||||  ||||||| |||||||| ||||    
T  14434436 agaggacatgattctatttgggttgtggttgataggttgacaaagtcggcacattttattcctatcaacatcagttatccggtagctcagttggctgaga 14434337  T
Q  218 tt 219  Q
    ||    
T  14434336 tt 14434335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 23505274 - 23505475
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    ||||||||| |||| |||||||||||| || |||||||||||||||||||| ||||| || |||||||||||||| || |||||||||||||||||| ||    
T  23505274 acatcagaaacctgcaggattgttgacgccattggatgtaccggagtggaaatgggatagcatttctatggattttgtgacgagtttaccaaacactccg 23505373  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    || || |||||| | |||||||||||  | ||  |||||||||||||||||||||| |||||||| ||  |||||||  | ||||| |||||||| ||||    
T  23505374 aggggacatgattcgatttgggttgtggttgataggttgacgaagtcggcacattttattcctatcaacatcagttatccagtagctcagttggctgaga 23505473  T
Q  218 tt 219  Q
    ||    
T  23505474 tt 23505475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 23 - 219
Target Start/End: Original strand, 18053361 - 18053558
Alignment:
Q  23 cagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cgagag 121  Q
    ||||| |||| ||||||||||||||| |||||||||||||||||||| ||||| || |||||||||||||| || |||| ||||||||||||| |||| |    
T  18053361 cagaaacctgcaggattgttgacaccattggatgtaccggagtggaaatgggatagcatttctatggattttgtgacgaatttaccaaacactccgaggg 18053460  T
Q  122 ggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagatt 219  Q
    | |||||| | |||||||||||  | ||  |||||||||||||||||||||| |||||||| ||  | |||||  ||||||| |||||||| ||||||    
T  18053461 gacatgattcgatttgggttgtggttgataggttgacgaagtcggcacattttattcctatcaacattagttatccggtagctcagttggctgagatt 18053558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 16071699 - 16071899
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactcga- 118  Q
    ||||||||||||| ||| |||||||||||||| ||||| |  ||||||||||||||||  ||||| |||||||| || ||||||||| | ||||||| |     
T  16071699 catcagaagcctgcagggttgttgacaccgttagatgtgctagagtggaagtgggacaacatttccatggattttgtgacgagtttatcgaacactcaaa 16071798  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||||||||||||||||||||| ||||  ||||||||||||||||||| ||  |||| || ||| | |||||  ||||||| |||||||| |||||    
T  16071799 gagggcatgatgccatttgggttgttgtcgataggttgacgaagtcggcacactttcttccgatcaatattagttatccggtagctcagttggcggagat 16071898  T
Q  219 t 219  Q
    |    
T  16071899 t 16071899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 19148055 - 19147855
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| ||| |||||||||||||||||||| || || ||||||||||| || ||||| |||||||| || ||||||||||| || ||| | |    
T  19148055 catcagaagcctgcagggttgttgacaccgttggatgtgccagaatggaagtgggatagcatttccatggattttgtgacgagtttaccgaatactccta 19147956  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    ||||| |||||||||||||||||||| ||||  ||||||||||||||||||| || ||||| || ||| | ||||   ||||||| |||||||| |||||    
T  19147955 gagggtatgatgccatttgggttgttgtcgataggttgacgaagtcggcacactttattccgatcaatattagttttccggtagctcagttggcggagat 19147856  T
Q  219 t 219  Q
    |    
T  19147855 t 19147855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 20747454 - 20747254
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| ||| |||||||||||||||||||| || || ||||||||||| || ||||| |||||||| || ||||||||||| || ||| | |    
T  20747454 catcagaagcctgcagggttgttgacaccgttggatgtgccagaatggaagtgggatagcatttccatggattttgtgacgagtttaccgaatactccaa 20747355  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    ||||| |||||||||||||||||||| ||||  ||||||||||||||||||| || ||||| || ||| | ||||   ||||||| |||||||| |||||    
T  20747354 gagggtatgatgccatttgggttgttgtcgataggttgacgaagtcggcacactttattccgatcaatattagttttccggtagctcagttggcggagat 20747255  T
Q  219 t 219  Q
    |    
T  20747254 t 20747254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 219
Target Start/End: Complemental strand, 15341276 - 15341075
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaaca-ctcg 117  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||| || ||||||||||||||  | |||||||||||||||| | ||    
T  15341276 acatcagaagcctgcagggttgttgacaccgttggatgtaccggagtggaaatgggatagcatttctatggattttatgacgagtttaccaaacaccccg 15341177  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    ||||| |||||| | || ||||||||  ||||  ||||||| |||| |||||| || |||||||| ||  | |||||  ||||||| |||||||| ||||    
T  15341176 agaggacatgattctatatgggttgtagtcgataggttgacaaagttggcacactttattcctatcaacattagttatccggtagctcagttggctgaga 15341077  T
Q  218 tt 219  Q
    ||    
T  15341076 tt 15341075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 219
Target Start/End: Complemental strand, 19613520 - 19613319
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| ||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||| || || |||||||| || ||| ||    
T  19613520 acatcagaagcctgcagggttgttgacaccattggatgtaccggagtggaaatgggatagtatttctatggattttgtgacaagtttacctaatactccg 19613421  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    ||||| |||||| | || ||||||||  | ||  | |||||||||||||| || || ||||| || ||| ||||||  ||||| || |||||||| ||||    
T  19613420 agaggacatgattctatatgggttgtggttgatagattgacgaagtcggcgcactttattccgataaatatcagtttttcggtggctcagttggcggaga 19613321  T
Q  218 tt 219  Q
    ||    
T  19613320 tt 19613319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 14263649 - 14263849
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-ga 118  Q
    |||||||||||||   | |||||||||||||| ||||| || ||||||||||||||||  ||||| ||| |||| || ||||||||| | || |||| ||    
T  14263649 catcagaagcctgcgtggttgttgacaccgttagatgtgccagagtggaagtgggacaacatttccatgaattttgtgacgagtttatcgaatactccga 14263748  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    ||||||||||||||||||| |||||| ||||  |||| |||||||||||||| || ||||| || ||| | ||||   ||||||| |||||||| |||||    
T  14263749 gagggcatgatgccatttgcgttgttgtcgataggttaacgaagtcggcacactttattccgatcaatattagttttccggtagctcagttggcggagat 14263848  T
Q  219 t 219  Q
    |    
T  14263849 t 14263849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 193
Target Start/End: Original strand, 11387832 - 11388007
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| ||||||||||| || ||||| || ||||||||||||||||  ||||||| ||||||  | ||||||||||| || ||| ||    
T  11387832 acatcagaagcctgcagggttgttgacaccattagatgtgccagagtggaagtgggacaacatttctacggattttatgacgagtttaccgaatactccg 11387931  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagtt 193  Q
    | |||||||||||| ||||||||| || | ||  ||||||||||||| || || || ||||| || ||| ||||||    
T  11387932 atagggcatgatgctatttgggtttttgtggataggttgacgaagtcagcgcactttattccgataaatatcagtt 11388007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 12206204 - 12206405
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-g 117  Q
    ||||||||||||||  || ||||||||||| || ||||| || || ||||| ||||| || || || ||||| || ||||| ||||||||||| |||| |    
T  12206204 acatcagaagcctgctgggttgttgacaccattagatgttccagaatggaaatgggatagcatatccatggactttgtaacaagtttaccaaatactctg 12206303  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    ||||||||||||| ||| ||| | ||| | ||  | |||| |||||| ||||| || ||||| |||||| | ||||   | || ||||||||||||||||    
T  12206304 agagggcatgatgtcatatggatggttgttgatagattgaagaagtcagcacactttattccaattaatattagttttccagtggcacagttggcagaga 12206403  T
Q  218 tt 219  Q
    ||    
T  12206404 tt 12206405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 185
Target Start/End: Complemental strand, 21662805 - 21662638
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    ||||||||| ||||| || ||||||||||| || ||||| || ||||||| |||||| ||||| || |||||||| || |||||||| || || ||| |     
T  21662805 acatcagaaacctgttgggttgttgacacctttagatgttccagagtggacgtgggatagtatatccatggattttgtgacgagtttgccgaatactcca 21662706  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaa 185  Q
    | ||| |||||||| ||||||||  || | ||  |  ||||||||||||| ||||| ||||| |||||    
T  21662705 aaaggacatgatgcgatttgggtaattgtggatagactgacgaagtcggctcattttattccgattaa 21662638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 193
Target Start/End: Original strand, 11771672 - 11771842
Alignment:
Q  24 agaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-gagagg 122  Q
    |||| |||| ||| ||| ||||||| || |||||||| |||||||| ||||| || || || |||||||| || |||||||| || || |||| || |||    
T  11771672 agaaacctgcagggttgatgacacctttagatgtaccagagtggaaatgggatagcatatccatggattttgtgacgagtttgccgaatactccgaaagg 11771771  T
Q  123 gcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagtt 193  Q
    | |||| || ||||||||  || | ||  | |||||||||||||| ||||||||||| || ||| ||||||    
T  11771772 gaatgacgcgatttgggtgattgttgatagattgacgaagtcggctcatttcattccgataaatatcagtt 11771842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 219
Target Start/End: Complemental strand, 8199426 - 8199271
Alignment:
Q  65 tggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactcg-agagggcatgatgccatttgggttgttatcgaccggttgacgaagt 163  Q
    ||||| ||||| ||||| || |||||||| || |||||||| ||||| ||||  |||||| | || || ||||||||| || | ||  ||||||||||||    
T  8199426 tggaaatgggatagtatatccatggattttgtgacgagtttgccaaatactcctagagggaacgacgcaatttgggttattgttgataggttgacgaagt 8199327  T
Q  164 cggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagatt 219  Q
    | || |||||| | ||||||||| | |||| | | || || |||||||||||||||    
T  8199326 cagctcatttcctacctattaatattagtttccctgttgcccagttggcagagatt 8199271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 219
Target Start/End: Complemental strand, 18178540 - 18178385
Alignment:
Q  65 tggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cgagagggcatgatgccatttgggttgttatcgaccggttgacgaagt 163  Q
    ||||| ||||| ||||| ||||||||||| || |||||||| ||||| ||| | |||||| | || || ||||||||| || | ||  | ||||||||||    
T  18178540 tggaaatgggatagtatatctatggattttgtgacgagtttgccaaatactcctagagggaacgacgcaatttgggttattgttgatagattgacgaagt 18178441  T
Q  164 cggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagatt 219  Q
    |||| |||||  | ||||||||| | |||| | | || || |||||||||||||||    
T  18178440 cggctcattttctacctattaatattagtttccctgttgcccagttggcagagatt 18178385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 141; Significance: 4e-74; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 16338158 - 16338358
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactcga- 118  Q
    ||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||| ||||||| |     
T  16338158 catcagaagcctgcagggttgttcacaccgttggatgtaccggagtggaagtgggacaatatctctatggatttcgtgacgagtttaccgaacactccaa 16338257  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||    
T  16338258 gagggcatgacgccatttgggttgttgtcgaccggttgacgaagtcggcacacttcattcctattaatatcagttacccggtagcacagttggcagagat 16338357  T
Q  219 t 219  Q
    |    
T  16338358 t 16338358  T

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Target: chr3; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 28754801 - 28754601
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-ga 118  Q
    ||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||| | ||    
T  28754801 catcagaagcctgcagggttgttgacaccgttagatgtaccggagtggaagtgggacagtatctctatggattttgtaacgagtttaccgaacaccccga 28754702  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||| ||||||||    
T  28754701 gagggcatgacgctatttgggttgttgtcgaccggttgacgaagtcggcacatttcattcctattaatatcagttatccggtagcacagttagcagagat 28754602  T
Q  219 t 219  Q
    |    
T  28754601 t 28754601  T

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Target: chr3; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 47124427 - 47124227
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-ga 118  Q
    ||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| || || |||||||| ||||||| ||    
T  47124427 catcagaagcctgcagggttgttgacaccgttagatgtaccggagtggaagtgggacagtatctctatggattttgtgacaagtttaccgaacactccga 47124328  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |  ||||||| || |||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||    
T  47124327 ggaggcatgacgctatttgggtagttgtcgaccggttgacgaagtcggcacatttcattcctattaatatcagttacccggtagcgcagttggcagagat 47124228  T
Q  219 t 219  Q
    |    
T  47124227 t 47124227  T

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Target: chr3; HSP #4
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 10384451 - 10384251
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||| |||||| |||    
T  10384451 catcagaagcctgcagggttgttgacaccgttagatgtaccggagtggaagtgggacagtatctctatggattttgtgacgagtttaccgaacactccga 10384352  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    | |||||||| || |||||||||||| ||||||||||||||||||||||||| ||||||||||| ||| |||||||  ||||||| ||||| ||||||||    
T  10384351 gggggcatgacgctatttgggttgttgtcgaccggttgacgaagtcggcacacttcattcctatcaatatcagttatccggtagcgcagttagcagagat 10384252  T
Q  219 t 219  Q
    |    
T  10384251 t 10384251  T

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Target: chr3; HSP #5
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 38 - 219
Target Start/End: Original strand, 16329324 - 16329507
Alignment:
Q  38 ttgttgacaccgtt-ggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-gagagggcatgatgccatt 135  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||| |||||||||||| || |||    
T  16329324 ttgttgacaccgttaggatgtaccggagtggaagtgggacagtatctctatggatttcgtgacgagtctaccaaacactccgagagggcatgacgctatt 16329423  T
Q  136 tgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagatt 219  Q
    ||||||||| || |||||||||||||||| ||||| ||||||||||| ||| |||||||| |||||||||||||||||||||||    
T  16329424 tgggttgttgtcaaccggttgacgaagtcagcacacttcattcctatcaatatcagttacccggtagcacagttggcagagatt 16329507  T

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Target: chr3; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 11303419 - 11303619
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    |||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||  |||||||||||||| |||||||||||||| |||||| |||    
T  11303419 catcagaagcttgtagggttgttgacaccgttggatgtgccggagtggaagtgggacaacatttctatggattttgtaacgagtttaccgaacactccga 11303518  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||||||||||||||||| ||  ||||| ||||||||||||||||||| || ||||| || ||| | |||||   |||||| |||||||| |||||    
T  11303519 gagggcatgatgccatttgggtcgtcgtcgacaggttgacgaagtcggcacactttattccgatcaatattagttatctggtagctcagttggcggagat 11303618  T
Q  219 t 219  Q
    |    
T  11303619 t 11303619  T

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Target: chr3; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 18133991 - 18134192
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||| ||||||||| ||| |||||||||||||||||||| ||||||||||||||||| || ||||| |||||||| || |||||||||||||||||| ||    
T  18133991 acattagaagcctgcagggttgttgacaccgttggatgtgccggagtggaagtgggatagcatttcaatggattttgtgacgagtttaccaaacactccg 18134090  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    |||||||||||||| || ||||||||  ||||| |||||||||| ||||| || || ||||| |||||| |||||||  ||||||| |||||||| ||||    
T  18134091 agagggcatgatgctatatgggttgtggtcgacaggttgacgaattcggcgcactttattccgattaatatcagttatccggtagctcagttggcggaga 18134190  T
Q  218 tt 219  Q
    ||    
T  18134191 tt 18134192  T

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Target: chr3; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 19 - 218
Target Start/End: Complemental strand, 17493114 - 17492914
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| ||||||||||||||||||||||| |||| ||||||||| || |||||||||||||| || ||||||||||| |||||| |     
T  17493114 acatcagaagcctgcagggttgttgacaccgttggatgtaccagagttgaagtgggatagcatttctatggattttgtgacgagtttaccgaacactcca 17493015  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    ||||||||||||||||| |||||| || ||||  | |||||||||||||| ||||| ||||| |||||| ||| |||  ||||||| |||||||| ||||    
T  17493014 agagggcatgatgccatatgggttattgtcgatagattgacgaagtcggcgcattttattccaattaatatcaattatccggtagctcagttggcggaga 17492915  T
Q  218 t 218  Q
    |    
T  17492914 t 17492914  T

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Target: chr3; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 19 - 178
Target Start/End: Original strand, 11960814 - 11960974
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| || |||||||| ||||||||| ||    
T  11960814 acatcagaagcctgcaggattgttgacaccgttggatgtaccggagtggaaatgagacagtatttctatggattttgtgacgagttttccaaacactccg 11960913  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattc 178  Q
    ||||| |||||| | || ||||||||  ||||  ||||||| |||||||||||||| ||||    
T  11960914 agaggacatgattctatatgggttgtggtcgataggttgacaaagtcggcacattttattc 11960974  T

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Target: chr3; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 20 - 170
Target Start/End: Complemental strand, 14574406 - 14574255
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| ||| ||||||||| |||| ||||| || |||||||||||||| || ||||| |||||||| || ||||||||||| |||||| |||    
T  14574406 catcagaagcctgcagggttgttgacatcgttagatgtgccagagtggaagtgggatagcatttccatggattttgtgacgagtttaccgaacactccga 14574307  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcaca 170  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  14574306 gagggcatgatgccatttgggttgttgtcgacaggttgacgaagtcggcaca 14574255  T

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Target: chr3; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 23 - 219
Target Start/End: Original strand, 8758731 - 8758928
Alignment:
Q  23 cagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cgagag 121  Q
    ||||| |||| ||||||||||||||| |||||||||||||||||||| ||||| || |||||||||||||| || |||||||||||||||||| |||| |    
T  8758731 cagaaacctgcaggattgttgacaccattggatgtaccggagtggaaatgggatagcatttctatggattttgtgacgagtttaccaaacactccgaggg 8758830  T
Q  122 ggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagatt 219  Q
    | |||||| | |||||||||||  | ||  |||||||||||||||||||||| |||||||| ||  | |||||  ||||||| |||||||| ||||||    
T  8758831 gacatgattcgatttgggttgtggttgataggttgacgaagtcggcacattttattcctatcaacattagttatccggtagctcagttggctgagatt 8758928  T

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Target: chr3; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 219
Target Start/End: Complemental strand, 13942508 - 13942307
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    ||||||||| |||| ||||||||||||| | |||||||||||||||||||| ||||| || |||||||||||||| || |||||||||||||||||| ||    
T  13942508 acatcagaaacctgcaggattgttgacatcattggatgtaccggagtggaaatgggatagcatttctatggattttgtgacgagtttaccaaacactccg 13942409  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    || || |||||| | |||||||||||  | ||  |||||||||||||||||||||| |||||||| ||  |||||||  | ||||| |||||||| ||||    
T  13942408 aggggacatgattcgatttgggttgtggttgataggttgacgaagtcggcacattttattcctatcaacatcagttatccagtagctcagttggctgaga 13942309  T
Q  218 tt 219  Q
    ||    
T  13942308 tt 13942307  T

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Target: chr3; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 23 - 219
Target Start/End: Complemental strand, 41178002 - 41177805
Alignment:
Q  23 cagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cgagag 121  Q
    ||||| |||| ||||||||||||||| |||||||||||||||||||| ||||| || |||||||||||||| || |||||||||||||||||| |||| |    
T  41178002 cagaaacctgcaggattgttgacaccattggatgtaccggagtggaaatgggatagcatttctatggattttgtgacgagtttaccaaacactccgaggg 41177903  T
Q  122 ggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagatt 219  Q
    | |||||| | |||||||||||  | ||  |||||||||||||||||||||| |||||||| ||  | |||||  ||||||| |||||||| ||||||    
T  41177902 gacatgattcgatttgggttgtggttgataggttgacgaagtcggcacattttattcctatcaacattagttatccggtagctcagttggctgagatt 41177805  T

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Target: chr3; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 16827849 - 16828048
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-ga 118  Q
    ||||||||||||| ||| |||||||||||||| ||||| || ||||||||||||||||  ||||| |||||||| || ||||||||||| ||||||| ||    
T  16827849 catcagaagcctgcagggttgttgacaccgttagatgtgccagagtggaagtgggacaacatttccatggattttgtgacgagtttaccgaacactctga 16827948  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||||||||||||||||||||  | ||  ||||||||||||||||||| || ||||| || ||| | |||||  ||||||| |||||||| |||||    
T  16827949 gagggcatgatgccatttgggttgtg-tggataggttgacgaagtcggcacactttattccgatcaatattagttatccggtagctcagttggcggagat 16828047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 38 - 219
Target Start/End: Original strand, 13322316 - 13322498
Alignment:
Q  38 ttgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cgagagggcatgatgccattt 136  Q
    |||||||||||||||||||||||||||||||| |||||||| || ||||||||||| || ||||||||||| || ||| ||||||| |||||| | || |    
T  13322316 ttgttgacaccgttggatgtaccggagtggaaatgggacagcatctctatggattttgtgacgagtttacctaatactccgagaggacatgattctatat 13322415  T
Q  137 gggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagatt 219  Q
    |||||||  ||||| |||||||||||||||| || || ||| | |||||| |||||||  ||||||| |||||||||||||||    
T  13322416 gggttgtggtcgacaggttgacgaagtcggcgcactttatttcgattaatatcagttatccggtagctcagttggcagagatt 13322498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 23 - 219
Target Start/End: Complemental strand, 4678918 - 4678721
Alignment:
Q  23 cagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cgagag 121  Q
    ||||| |||| ||||||||||||||| |||||||||||||||||||| ||||| || |||||||||||||| || |||||||||||||||||| |||| |    
T  4678918 cagaaacctgcaggattgttgacaccattggatgtaccggagtggaaatgggatagcatttctatggattttgtgacgagtttaccaaacactccgaggg 4678819  T
Q  122 ggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagatt 219  Q
    | |||||| | |||||||| ||  | ||  |||||||||||||||||||||| |||||||| ||  |||||||  | ||||| |||||||| ||||||    
T  4678818 gacatgattcgatttgggtggtggttgataggttgacgaagtcggcacattttattcctatcaacatcagttatccagtagctcagttggctgagatt 4678721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 16836156 - 16836356
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| ||| |||||||||||||| ||||| ||||||||||| ||||| || |||||||||||||| || |||||||||||||||||| | |    
T  16836156 catcagaagcctgcagggttgttgacaccgttagatgtgccggagtggaaatgggatagcatttctatggattttgtgacgagtttaccaaacactccaa 16836255  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||| |||||| | |||||||||||  |||||  |||||| |||||||| || ||||||||||| ||  |||||||  | ||||| |||||||| |||||    
T  16836256 gaggacatgattctatttgggttgtggtcgacaagttgacaaagtcggcgcacttcattcctatcaacatcagttatccagtagctcagttggctgagat 16836355  T
Q  219 t 219  Q
    |    
T  16836356 t 16836356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 24 - 219
Target Start/End: Original strand, 12360192 - 12360388
Alignment:
Q  24 agaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cgagagg 122  Q
    ||||||||| ||| |||||||||| ||||||||| ||||||||||||||||| |  |||||||||||||| || ||||||||||| |||||| |||||||    
T  12360192 agaagcctgcagggttgttgacacagttggatgtgccggagtggaagtgggataacatttctatggattttgtgacgagtttaccgaacactccgagagg 12360291  T
Q  123 gcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagatt 219  Q
    |||||||||||| ||||||||  ||||| ||||||| |||| ||| || || ||||| |||||| |||  ||  || |||| |||||||| ||||||    
T  12360292 gcatgatgccatatgggttgtggtcgacaggttgacaaagttggcgcactttattccgattaatatcaaatatccgatagctcagttggcggagatt 12360388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 212
Target Start/End: Complemental strand, 44777731 - 44777537
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactcga 118  Q
    |||||||||||| | ||||||||||||||| ||||||||||| |||||||| ||||| || |||||||||||||| || |||||||||||||||||||      
T  44777731 acatcagaagcccgcaggattgttgacaccattggatgtaccagagtggaaatgggatagcatttctatggattttgtgacgagtttaccaaacactccg 44777632  T
Q  119 gaggg-catgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggc 212  Q
     |||| |||||| | |||||||| ||  | ||  |||||||||||||||||||||| |||||||| ||  ||| |||  ||||||| ||||||||    
T  44777631 aagggacatgattcgatttgggtggtggttgataggttgacgaagtcggcacattttattcctatcaacatcaattatccggtagctcagttggc 44777537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 16380574 - 16380774
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||| ||||||| |||||||||||| |||||||||||||| |||||||| ||||| || ||||||||||||||||| || || |||||||||||| |||    
T  16380574 catcaaaagcctgcaggattgttgacgccgttggatgtaccagagtggaaatgggatagcatttctatggatttcgtgacaagcttaccaaacactccga 16380673  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||| |||||| | |||||||||||  | ||  | ||| | |||||||||||||| |||||||| ||  |||||||  | ||||| |||||||| |||||    
T  16380674 gaggacatgattctatttgggttgtggttgatagattgtcaaagtcggcacattttattcctatcaacatcagttatccagtagctcagttggctgagat 16380773  T
Q  219 t 219  Q
    |    
T  16380774 t 16380774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 10419690 - 10419891
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaaca-ctcg 117  Q
    ||||||||||||||  ||||||||||||||||||||| ||||||||||||| ||||| || |||||||||||||| || || |||||||| || | | ||    
T  10419690 acatcagaagcctgcgggattgttgacaccgttggatataccggagtggaaatgggatagcatttctatggattttgtgacaagtttacccaataccccg 10419789  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    ||||| || ||| | || ||||||||| | ||| |||||||||||||||| || |||||||| |||||| | |||||  | ||||| ||| |||| ||||    
T  10419790 agaggacacgattctatatgggttgttgttgacaggttgacgaagtcggcgcacttcattccgattaatataagttatccagtagctcagctggcggaga 10419889  T
Q  218 tt 219  Q
    ||    
T  10419890 tt 10419891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 13971765 - 13971966
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| ||||||||||| |||||| ||||||||||||| ||||| ||||||||||||||||| || || |||||||| || ||| ||    
T  13971765 acatcagaagcctgcagggttgttgacaccattggatataccggagtggaaatgggatagtatttctatggattttgtgacaagtttacctaatactccg 13971864  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    ||||| |||||| | || ||||||||  ||||  | |||||||||||||| || || ||||| || ||| ||||||   |||| || |||||||| ||||    
T  13971865 agaggacatgattctatatgggttgtggtcgatagattgacgaagtcggcgcactttattccgataaatatcagttttccggtggctcagttggcggaga 13971964  T
Q  218 tt 219  Q
    ||    
T  13971965 tt 13971966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 19 - 219
Target Start/End: Complemental strand, 14087157 - 14086956
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    ||||||||| |||| ||| ||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||| || || |||||||| || ||| ||    
T  14087157 acatcagaaacctgcagggttgttgacaccattggatgtaccggagtggaaatgggatagtatttctatggattttgtgacaagtttacctaatactccg 14087058  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    ||||| |||||| | || ||||||||  ||||  | |||||||||||||| || || ||||| || ||| ||||||   |||| || |||||||| ||||    
T  14087057 agaggacatgattctatatgggttgtggtcgatagattgacgaagtcggcgcactttattccgataaatatcagttttccggtggctcagttggcggaga 14086958  T
Q  218 tt 219  Q
    ||    
T  14086957 tt 14086956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 74 - 179
Target Start/End: Original strand, 15952668 - 15952774
Alignment:
Q  74 gacagtatttctatggatttcgtaacgagtttaccaaacactc-gagagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatt 172  Q
    ||||| ||||| |||||||| |||||||||||||| ||||||| |||||||||||||||||||||||| ||| ||||| || |||||||||||||||| |    
T  15952668 gacagcatttccatggattttgtaacgagtttaccgaacactccgagagggcatgatgccatttgggtggttgtcgacaggctgacgaagtcggcacact 15952767  T
Q  173 tcattcc 179  Q
    | |||||    
T  15952768 ttattcc 15952774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 31694831 - 31694893
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtat 81  Q
    |||||||||||||| ||| ||||||||||||||  |||| |||||||||||||||||||||||    
T  31694831 acatcagaagcctgcagggttgttgacaccgttaaatgtgccggagtggaagtgggacagtat 31694893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 219
Target Start/End: Complemental strand, 15228133 - 15227932
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-g 117  Q
    ||||||||||| ||| || ||||||||||  || || ||||| ||  |||| ||||| || || || ||||| || ||||| |||||||| || |||| |    
T  15228133 acatcagaagcttgttgggttgttgacactattagaagtaccagaaaggaaatgggatagcatatccatggactttgtaacaagtttaccgaatactccg 15228034  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    ||||||||||||||||| ||||| ||| | ||  | ||||||||||| ||||| || ||||| |||||| | ||||    ||| ||||||||||||||||    
T  15228033 agagggcatgatgccatatgggtagttgttgatagattgacgaagtcagcacactttattccgattaatattagttttctggtggcacagttggcagaga 15227934  T
Q  218 tt 219  Q
    ||    
T  15227933 tt 15227932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 31939387 - 31939329
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggaca 77  Q
    |||||||||||||  ||| |||||||||||||| ||||| |||||||||||||||||||    
T  31939387 acatcagaagccttcagggttgttgacaccgttagatgtgccggagtggaagtgggaca 31939329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 138; Significance: 3e-72; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 10468411 - 10468612
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||| |||||| ||    
T  10468411 acatcagaagcctgcagggttgttgacaccgttggatgtaccggagtggaagtgggacagtatctctatagatttcgtgacgagtttaccgaacactccg 10468510  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    ||||||||||| || |||||||||||| ||||||||||||||||||||||||| ||||||||||| ||| |||||||  |||||||||||||||||||||    
T  10468511 agagggcatgaagcaatttgggttgttgtcgaccggttgacgaagtcggcacacttcattcctatcaatatcagttatccggtagcacagttggcagaga 10468610  T
Q  218 tt 219  Q
    ||    
T  10468611 tt 10468612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 19 - 211
Target Start/End: Original strand, 14381029 - 14381222
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||| ||||| |||||||||||||||||||||||| |||||||||||||| || || |||||||||||||| || |||||||||||||||||| ||    
T  14381029 acatcagaggcctgcaggattgttgacaccgttggatgtgccggagtggaagtgagatagcatttctatggattttgtgacgagtttaccaaacactccg 14381128  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttgg 211  Q
    |||||||||||||||||||||||| || ||||| ||||||||||||||||||| ||||||||||||||| | ||||||  |||||| |||||||    
T  14381129 agagggcatgatgccatttgggttattgtcgacaggttgacgaagtcggcacacttcattcctattaatattagttacctggtagctcagttgg 14381222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 5296769 - 5296969
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||| || |||||||||||||| || || ||||||||||||||| |||    
T  5296769 catcagaagcctgcagggttgttgacaccgttggatgtaccggagtggaaatgggatagcatttctatggattttgtgactagtttaccaaacactccga 5296868  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||  ||| |||   |||||| |||||||| |||||    
T  5296869 gagggcatgatgccatttgggttgttgtcgatcggttgacgaagtcggcacacttcattcctattaacatcaattatcgggtagctcagttggctgagat 5296968  T
Q  219 t 219  Q
    |    
T  5296969 t 5296969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 24365130 - 24364930
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||| |||||| |||    
T  24365130 catcagaagcctgcagggttgttgacaccgttggatgtaccggagtggaagtgggacagtatatctatggattttgtgacgagtttaccgaacactccga 24365031  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||||| || |||||||||||| ||||||||||||| ||||||||||| ||||||||||| ||| ||| |||  ||| ||| ||||| ||||||||    
T  24365030 gagggcatgacgctatttgggttgttgtcgaccggttgacaaagtcggcacacttcattcctatcaatatcaattatccggcagcgcagttagcagagat 24364931  T
Q  219 t 219  Q
    |    
T  24364930 t 24364930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 20 - 218
Target Start/End: Original strand, 8762496 - 8762695
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-ga 118  Q
    ||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||   |||| ||||||||| || ||||||||||| ||||||| ||    
T  8762496 catcagaagcctgcagggttgttgacaccgttggatgtgccggagtggaagtgggacgacatttatatggattttgtgacgagtttaccgaacactcaga 8762595  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||||||||||||||||||||  ||||| |||||||||||||||| || || ||||  ||| || ||| |||  ||||||| |||||||| |||||    
T  8762596 gagggcatgatgccatttgggttgtggtcgacaggttgacgaagtcggcgcactttattctgattgatatcaattatccggtagctcagttggcggagat 8762695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 42 - 219
Target Start/End: Complemental strand, 17416182 - 17416004
Alignment:
Q  42 tgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cgagagggcatgatgccatttgggt 140  Q
    |||||||||||||||| ||||||||||||||||| |  |||||||||||||| |||||||||||||| |||||| ||||||| |||||||||||||||||    
T  17416182 tgacaccgttggatgtgccggagtggaagtgggataacatttctatggattttgtaacgagtttaccgaacactccgagaggacatgatgccatttgggt 17416083  T
Q  141 tgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagatt 219  Q
     ||  ||||| |||||||||||||||| || || ||||| |||||| |||||||  ||||||| |||||||| ||||||    
T  17416082 agtagtcgacaggttgacgaagtcggcgcactttattccaattaatatcagttatccggtagctcagttggcggagatt 17416004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 219
Target Start/End: Complemental strand, 19454139 - 19453938
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||| ||| ||| |||||||||||||||||||| ||||||||||| ||||| |  |||||||||||||| || ||||||||||| |||||| ||    
T  19454139 acatcagaagtctgcagggttgttgacaccgttggatgtgccggagtggaattgggatatcatttctatggattttgtgacgagtttaccgaacactccg 19454040  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    ||||||||||||||||||||||||||  | ||| ||||||| ||||| || || || ||||| |||||| |||||||  ||||||| |||||||| ||||    
T  19454039 agagggcatgatgccatttgggttgtggttgacaggttgacaaagtcagcgcactttattccgattaatatcagttatccggtagctcagttggcggaga 19453940  T
Q  218 tt 219  Q
    ||    
T  19453939 tt 19453938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 219
Target Start/End: Complemental strand, 21472320 - 21472119
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||| || ||| |||| |  ||||||||||| || ||| |     
T  21472320 acatcagaagcctgcagggttgttgacaccgttagatgtaccggagtggaagtgggacagtatctccatgaattttgcgacgagtttaccgaatactcca 21472221  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||| || || || ||| | ||||   ||||||| |||||||| ||||    
T  21472220 agagggcatgatgccatttgggttgttgtcgacaggttgacgaagtcggcgcattttatcccgatcaatattagttttccggtagctcagttggcggaga 21472121  T
Q  218 tt 219  Q
    ||    
T  21472120 tt 21472119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 219
Target Start/End: Complemental strand, 15460055 - 15459854
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||| || |||||||||||||| || || |||||||| || ||| ||    
T  15460055 acatcagaagcctgcaggattgttgacaccgttggatataccggagtggaaatgggatagcatttctatggattttgtgacaagtttacctaatactccg 15459956  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    ||||| || ||| | || ||||||||| | ||| ||||||||||||||||||| |||||||| |||||| | |||||  | ||||| ||| |||||||||    
T  15459955 agaggacacgattctatatgggttgttgttgacaggttgacgaagtcggcacacttcattccgattaatataagttatccagtagctcagctggcagaga 15459856  T
Q  218 tt 219  Q
    ||    
T  15459855 tt 15459854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 27560179 - 27560380
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| |||||||||||| || |||||||||||||||||||| ||||| || |||||||||||||| || || ||||||||||||||| ||    
T  27560179 acatcagaagcctgcaggattgttgacgccattggatgtaccggagtggaaatgggatagcatttctatggattttgtgacaagtttaccaaacactccg 27560278  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    || || |||||| | |||||||| ||  | ||  |||||||||||||||||||||| |||||||| ||  |||||||  ||||||| |||||||| ||||    
T  27560279 aggggacatgattcgatttgggtggtggttgataggttgacgaagtcggcacattttattcctatcaacatcagttatccggtagctcagttggctgaga 27560378  T
Q  218 tt 219  Q
    ||    
T  27560379 tt 27560380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 23 - 219
Target Start/End: Original strand, 28282379 - 28282576
Alignment:
Q  23 cagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cgagag 121  Q
    ||||| |||| ||||||||||||||| |||||||||||||||||||| ||||| || |||||||||||||| || |||||||||||||||||| |||| |    
T  28282379 cagaaacctgcaggattgttgacaccattggatgtaccggagtggaaatgggatagcatttctatggattttgtgacgagtttaccaaacactccgaggg 28282478  T
Q  122 ggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagatt 219  Q
    | |||||| | |||||||||||  | ||  |||||||||||||||||||||| |||||||| ||  | |||||  ||||||| |||||||| ||||||    
T  28282479 gacatgattcgatttgggttgtggttgataggttgacgaagtcggcacattttattcctatcaacattagttatccggtagctcagttggctgagatt 28282576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 34645148 - 34645349
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||| ||||| ||| ||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||| ||    
T  34645148 acatcagaggcctgcagggttgttgacaccattggatgtaccggagtggaaatgggatagtatttctatggatttcgtgacgagtttaccaaacactccg 34645247  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    ||||| |||||| | || ||||||||  ||||  | |||||||||||||| || || ||||| || ||| ||||||   |||| || || ||||||||||    
T  34645248 agaggacatgattctatatgggttgtagtcgatagattgacgaagtcggcgcactttattccgataaatatcagttttccggtggcgcaattggcagaga 34645347  T
Q  218 tt 219  Q
    ||    
T  34645348 tt 34645349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 173
Target Start/End: Complemental strand, 25768909 - 25768755
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacac-tcga 118  Q
    ||||||||||||| ||| ||||||||||| || ||||| || ||||||||||||||||||||||| |||||||| || ||||||||||| || || ||||    
T  25768909 catcagaagcctgcagggttgttgacaccattagatgtgccagagtggaagtgggacagtatttccatggattttgtgacgagtttaccgaatacttcga 25768810  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacattt 173  Q
    | || ||||||||||||||||||||  ||||   ||||||||||||||| |||||    
T  25768809 ggggacatgatgccatttgggttgtcgtcgatacgttgacgaagtcggcgcattt 25768755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 19 - 218
Target Start/End: Original strand, 21563694 - 21563894
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    ||||||||||| || ||| ||||||||| |||||||||| ||||||||||| ||||| |  |||||||||||||| || || ||||||||||||||| ||    
T  21563694 acatcagaagcttgcagggttgttgacatcgttggatgtgccggagtggaaatgggataacatttctatggattttgtgacaagtttaccaaacactccg 21563793  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    ||||| |||||| | || ||||||||  ||||  |||||||||||||||| || || ||||| || ||| |||||||   |||||| |||||||| ||||    
T  21563794 agaggacatgattctatatgggttgtggtcgataggttgacgaagtcggcgcactttattccgatcaatatcagttatcaggtagctcagttggcggaga 21563893  T
Q  218 t 218  Q
    |    
T  21563894 t 21563894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 19 - 218
Target Start/End: Original strand, 21569553 - 21569753
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    ||||||||||| || ||| ||||||||| |||||||||| ||||||||||| ||||| |  |||||||||||||| || || ||||||||||||||| ||    
T  21569553 acatcagaagcttgcagggttgttgacatcgttggatgtgccggagtggaaatgggataacatttctatggattttgtgacaagtttaccaaacactccg 21569652  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    ||||| |||||| | || ||||||||  ||||  |||||||||||||||| || || ||||| || ||| |||||||   |||||| |||||||| ||||    
T  21569653 agaggacatgattctatatgggttgtggtcgataggttgacgaagtcggcgcactttattccgatcaatatcagttatctggtagctcagttggcggaga 21569752  T
Q  218 t 218  Q
    |    
T  21569753 t 21569753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 22796195 - 22796395
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-ga 118  Q
    ||||||||||||| ||| |||||||||||||| ||||| ||  ||||||||||| |||  || |  |||||||| || ||||||||||| || |||| ||    
T  22796195 catcagaagcctgcagggttgttgacaccgttagatgtgccaaagtggaagtggaacaacatatacatggattttgtgacgagtttaccgaatactccga 22796294  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||||||||||||||||||||| ||||  ||||||| |||||| |||| || ||||| || | | | |||||  ||||||| |||||||| |||||    
T  22796295 gagggcatgatgccatttgggttgttgtcgataggttgacaaagtcgacacactttattccgatcattattagttatccggtagctcagttggcggagat 22796394  T
Q  219 t 219  Q
    |    
T  22796395 t 22796395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 193
Target Start/End: Complemental strand, 19880017 - 19879842
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| ||||||||||| ||||||||||| |||||||| ||||| || ||||||||||||||||| |||||| ||||||||||| ||    
T  19880017 acatcagaagcctgcagggttgttgacaccattggatgtaccagagtggaaatgggatagcatttctatggatttcgtgacgagtctaccaaacactccg 19879918  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagtt 193  Q
    || ||  ||||| | || ||||||||  ||||  | |||||||||||||| || || ||||| || ||| ||||||    
T  19879917 aggggatatgattcaatatgggttgtggtcgatagattgacgaagtcggcgcactttattccgataaatatcagtt 19879842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 19435721 - 19435653
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctat 87  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19435721 acatcagaagcctgcagggttgttgacaccgttggatgtaccggagtggaagtgggacagtatttctat 19435653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 18795408 - 18795208
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| ||| ||||||| ||| || ||||| || ||||||||||||||||  |||||||||||||| || || | ||||||||||||| |||    
T  18795408 catcagaagcctgcagggttgttgataccattagatgttccagagtggaagtgggacaacatttctatggattttgtgacaattttaccaaacactccga 18795309  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    | || |||||| | || ||||||||  ||||  ||||||||||||| || || || ||||| || ||| ||||||   ||||||| |||||||| |||||    
T  18795308 ggggacatgattctatatgggttgtggtcgataggttgacgaagtcagcgcactttattccgataaatatcagttttccggtagctcagttggcggagat 18795209  T
Q  219 t 219  Q
    |    
T  18795208 t 18795208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 48 - 173
Target Start/End: Original strand, 5838810 - 5838936
Alignment:
Q  48 cgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactcg-agagggcatgatgccatttgggttgttat 146  Q
    |||| ||||| ||||| ||||| ||||| ||||| || |||||||| || || ||||| || || ||||  |||||| |||| || ||||||||| || |    
T  5838810 cgttagatgtgccggaatggaaatgggatagtatatccatggattttgtgactagtttgccgaatactcctagagggaatgacgcaatttgggttattgt 5838909  T
Q  147 cgaccggttgacgaagtcggcacattt 173  Q
    |||| |||||||||||||||| |||||    
T  5838910 cgacaggttgacgaagtcggctcattt 5838936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 15896679 - 15896638
Alignment:
Q  152 ggttgacgaagtcggcacatttcattcctattaatgtcagtt 193  Q
    |||||||||||||||| ||||||||||| |||||| ||||||    
T  15896679 ggttgacgaagtcggctcatttcattccgattaatatcagtt 15896638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 138; Significance: 3e-72; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 19 - 219
Target Start/End: Complemental strand, 33223778 - 33223577
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-g 117  Q
    |||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| || ||||||||||| ||||||| |    
T  33223778 acatcagaagcctgcagggttgttgacaccgttggatgtaccggaatggaagtgggacagtatctctatggattttgtgacgagtttaccgaacactccg 33223679  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||| ||| |||||||  |||||||||||||||||||||    
T  33223678 agagggcatgatgccatttggattgttgtcgaccggttgacgaagtcggcacacttcattcctatcaatatcagttatccggtagcacagttggcagaga 33223579  T
Q  218 tt 219  Q
    ||    
T  33223578 tt 33223577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 3264212 - 3264412
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-ga 118  Q
    ||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||||||| ||    
T  3264212 catcagaagcctgcagggttgttgacaccgttagatgtaccggagtggaagtgggacagtatctctatggattttgtgacgagtttaccgaacactccga 3264311  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||||| || |||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||  ||||||| ||||||||||||||    
T  3264312 gagggcatgacgctatttgggttgttgtcgaccggttgacgaagtcggcacacttcattcctattaatatcagttatccggtagcgcagttggcagagat 3264411  T
Q  219 t 219  Q
    |    
T  3264412 t 3264412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 20891836 - 20891636
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-ga 118  Q
    ||||||||||||  ||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||| ||||||| ||    
T  20891836 catcagaagcctacagggttgatgacaccgttggatgtaccggagtggaagtgggacagtatctctatggatttcgtgacgagtctaccgaacactccga 20891737  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||||| || |||||||||||| ||||||||||||||||||||||||| ||||||||||| ||| |||||||  ||||||||||||||||||||||    
T  20891736 gagggcatgacgctatttgggttgttgtcgaccggttgacgaagtcggcacacttcattcctatcaatatcagttatccggtagcacagttggcagagat 20891637  T
Q  219 t 219  Q
    |    
T  20891636 t 20891636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 20 - 218
Target Start/End: Original strand, 11206649 - 11206848
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||| |||||| |||    
T  11206649 catcagaagcctgcagggttgttgacaccgttggatgtaccggagtggaagtgggacagtatctctatggattttgtgacgagtttaccgaacactccga 11206748  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||||| || |||||||||||| ||||||| ||||||||||||||||| ||||||||||||||| |||||||  ||||||| ||||| ||||||||    
T  11206749 gagggcatgacgctatttgggttgttgtcgaccgattgacgaagtcggcacacttcattcctattaatatcagttatccggtagcgcagttagcagagat 11206848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 29452955 - 29453155
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||| |||||| |||    
T  29452955 catcagaagcctgcagggttgttgacaccgttagatgtaccggagtggaagtgggacagtatctctatggattttgtgacgagtttaccgaacactccga 29453054  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    | |||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||  ||||||| ||||| ||||||||    
T  29453055 gggggcatgacgctatttgggttgttgtcgaccggttgacgaagtcggcacatttcattcctattaacatcagttatccggtagcgcagttagcagagat 29453154  T
Q  219 t 219  Q
    |    
T  29453155 t 29453155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 44661284 - 44661484
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    |||||||||||||  || |||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||| || ||||||||||| |||||| |||    
T  44661284 catcagaagcctgcggggttgttgacaccgttagatgtaccggagtggaagtgggatagtatctctatggattttgtgacgagtttaccgaacactccga 44661383  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||||| || |||||||||||| ||||||||||||| ||||||||||| ||||||||||| ||| ||| |||  ||||||| ||||| ||||||||    
T  44661384 gagggcatgacgctatttgggttgttgtcgaccggttgacaaagtcggcacacttcattcctatcaatatcaattatccggtagcgcagttagcagagat 44661483  T
Q  219 t 219  Q
    |    
T  44661484 t 44661484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 15246778 - 15246578
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| ||| |||||||||||||| ||||| ||||||||||||||||| || |||||||||||||| |||||||||||||| |||||| |||    
T  15246778 catcagaagcctgcagggttgttgacaccgttagatgtgccggagtggaagtgggatagcatttctatggattttgtaacgagtttaccgaacactccga 15246679  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||| || || ||||| || ||| | |||||  |  |||| ||||||||||||||    
T  15246678 gagggcatgatgccatttgggttgttgtcgacaggttgacgaagtcggcgcactttattccgatcaatattagttatccaatagctcagttggcagagat 15246579  T
Q  219 t 219  Q
    |    
T  15246578 t 15246578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 49 - 219
Target Start/End: Original strand, 15358537 - 15358708
Alignment:
Q  49 gttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-gagagggcatgatgccatttgggttgttatc 147  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||  | ||||||||||| ||||||| |||||||||||||||||||||||||||| ||    
T  15358537 gttggatgtgccggagtggaaatgggacagtatttctatggattttctgacgagtttaccgaacactccgagagggcatgatgccatttgggttgttgtc 15358636  T
Q  148 gaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagatt 219  Q
    ||| ||||||||||||||||||| |||||||| |||||| |||||||  ||||||| |||||||| ||||||    
T  15358637 gacaggttgacgaagtcggcacacttcattccaattaatatcagttatccggtagctcagttggcggagatt 15358708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 1648695 - 1648895
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||| ||||| ||| |||||||||||||||||| ||| ||||||||| |||||||| |||||||||||||| |||||||||||||| || ||| |||    
T  1648695 catcagaggcctgcagggttgttgacaccgttggatatactggagtggaaatgggacagcatttctatggattttgtaacgagtttacctaatactccga 1648794  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||| || | || ||||||||  ||||  ||||||| ||||||||||||||||||||||||||| | ||||| |||||||| |||||||| |||||    
T  1648795 gagggcataattctatatgggttgtggtcgataggttgactaagtcggcacatttcattcctattaatattagttattcggtagctcagttggctgagat 1648894  T
Q  219 t 219  Q
    |    
T  1648895 t 1648895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 27901240 - 27901040
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||| ||||| ||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||| || || |||||||| || ||| |||    
T  27901240 catcagaggcctgcagggttgttgacaccgttggatgtaccggagtggaaatgggacagcatttctatggattttgtgacaagtttacctaatactccga 27901141  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    ||||||||||| | || ||||||||  | ||| |||||||||||||||| || |||||||| |||||| |||||||  | ||||| ||||||||||||||    
T  27901140 gagggcatgattctatatgggttgtggtagacaggttgacgaagtcggcgcacttcattccgattaatatcagttatccagtagctcagttggcagagat 27901041  T
Q  219 t 219  Q
    |    
T  27901040 t 27901040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 15002782 - 15002982
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-ga 118  Q
    ||||||||||||| ||  |||||||||||||| ||||| || ||| |||||||||| |  ||||| |||||||| || ||||||||||| ||||||| ||    
T  15002782 catcagaagcctgcagtgttgttgacaccgttagatgtgccagagcggaagtgggagatcatttccatggattttgtgacgagtttaccgaacactccga 15002881  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||| || ||||| || ||||| |||||  ||||||| | |||||| |||||    
T  15002882 gagggcatgatgccatttgggttgttgtcgacaggttgacgaagtcggcacactttattccgatcaatgttagttatccggtagctcggttggcggagat 15002981  T
Q  219 t 219  Q
    |    
T  15002982 t 15002982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 166
Target Start/End: Complemental strand, 15320004 - 15319858
Alignment:
Q  21 atcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cgag 119  Q
    |||||||||||| ||| |||||||||||||| ||||| |  ||||||||||||||||  || || |||||||| || ||||||||||| || ||| ||||    
T  15320004 atcagaagcctgcagggttgttgacaccgttagatgtgcgagagtggaagtgggacaacatctccatggattttgtgacgagtttaccgaatactccgag 15319905  T
Q  120 agggcatgatgccatttgggttgttatcgaccggttgacgaagtcgg 166  Q
    |||||||||| |||||||||||||| | ||  |||||||||| ||||    
T  15319904 agggcatgataccatttgggttgttgttgataggttgacgaactcgg 15319858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 19 - 179
Target Start/End: Complemental strand, 15078490 - 15078329
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| ||  ||||||| || ||||| || ||||||||||||||||  ||||| |||||||| || ||||||||| | || ||| ||    
T  15078490 acatcagaagcctgcagggttaatgacaccattagatgtgccagagtggaagtgggacaacatttccatggattttgtgacgagtttatcgaatactccg 15078391  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcc 179  Q
    |||||||||||| |||||||||||||| | ||  |||||| ||||||||| ||||| |||||    
T  15078390 agagggcatgataccatttgggttgttgttgaaaggttgatgaagtcggcgcattttattcc 15078329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 8706773 - 8706624
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    ||||||||||||||  || |||||||||||||| ||||| ||||||||||| || || || || || |||||||| ||||| |||||||| || ||| |     
T  8706773 acatcagaagcctgctgggttgttgacaccgttagatgtgccggagtggaaatgagatagcatatccatggattttgtaacaagtttaccgaatactcca 8706674  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggc 167  Q
    ||||||||||||||||||||||| ||| | ||  | ||||||||||||||    
T  8706673 agagggcatgatgccatttgggtggttgttgatagattgacgaagtcggc 8706624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 177
Target Start/End: Complemental strand, 14691757 - 14691598
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    ||||||||| |||| ||| ||| |||||||||| |||||||| |||||||| ||||| || || || |||||||| || |||||||| || || ||| ||    
T  14691757 acatcagaaacctgcagggttgatgacaccgttagatgtaccagagtggaaatgggatagcatatccatggattttgtgacgagtttgccgaatacttcg 14691658  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcatt 177  Q
    | |||| |||| || ||||||||  || | ||  | |||||||||||||| |||||||||    
T  14691657 aaagggaatgacgcgatttgggtgattgtagatggattgacgaagtcggctcatttcatt 14691598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 15414443 - 15414644
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    ||||||||||||||  || ||| ||| ||| || ||||| || |||||||| ||||| || || || ||||| || ||||| |||||||  || ||| ||    
T  15414443 acatcagaagcctgctgggttgctgaaaccattagatgtgccagagtggaaatgggatagcatatccatggactttgtaacaagtttactgaatacttcg 15414542  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    ||||||||||||||||| ||| | ||| | ||  | || |||||||| ||||| || ||||| |||||| | ||||  ||||| ||| ||||||||||||    
T  15414543 agagggcatgatgccatatggctggttgttgatagattaacgaagtcagcacactttattccgattaatattagtttttcggtggcatagttggcagaga 15414642  T
Q  218 tt 219  Q
    ||    
T  15414643 tt 15414644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 249498 - 249298
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| | | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||    
T  249498 catcagaagcctgcatggttgttgacaccgttggatgtaccggagtcgaagtgggacagtatttctatggatttcgtgacgagtttaccaaacactccga 249399  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    ||||||||||||| ||||||||| || ||||| |||||||||||||||||||||||||||| |||||| |||||||  ||||||||||||||| ||||||    
T  249398 gagggcatgatgcaatttgggttattgtcgacaggttgacgaagtcggcacatttcattccaattaatatcagttatccggtagcacagttggtagagat 249299  T
Q  219 t 219  Q
    |    
T  249298 t 249298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 137; Significance: 1e-71; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 31831143 - 31830943
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-ga 118  Q
    ||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||| || |||||||| |||||||||||||| ||||||| ||    
T  31831143 catcagaagcctgcagggttgttgacaccgttagatgtaccggagtggaagtgggacagtatctccatggattttgtaacgagtttaccgaacactccga 31831044  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    | |||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||    
T  31831043 gggggcatgacgctatttgggttgttgtcgaccggttgacgaagtcggcacatttcattcctattaatatcagttacccggtagcgcagttggcagagat 31830944  T
Q  219 t 219  Q
    |    
T  31830943 t 31830943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 1064236 - 1064036
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||| |||||| |||    
T  1064236 catcagaagcctgcagggttgttgacaccgttagatgtaccggagtggaagtgggacagtatctctatggattttgtgacgagtttaccgaacactccga 1064137  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||||| || |||||||||||| ||||||||||||||||||||||||| ||||||||||| ||| |||||||  ||||||| ||||||||||||||    
T  1064136 gagggcatgacgctatttgggttgttgtcgaccggttgacgaagtcggcacacttcattcctatcaatatcagttatccggtagcgcagttggcagagat 1064037  T
Q  219 t 219  Q
    |    
T  1064036 t 1064036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 20828744 - 20828544
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||| |||||| |||    
T  20828744 catcagaagcctgcagggttgttgacaccgttagatgtaccggagtggaagtgggacagtatctctatggattttgtgacgagtttaccgaacacttcga 20828645  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    | |||||||| || |||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||  ||||||| ||||||||||||||    
T  20828644 gggggcatgacgctatttgggttgttgtcgaccggttgacgaagtcggcacacttcattcctattaatatcagttatccggtagcgcagttggcagagat 20828545  T
Q  219 t 219  Q
    |    
T  20828544 t 20828544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 20833470 - 20833270
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||| |||||| |||    
T  20833470 catcagaagcctgcagggttgttgacaccgttagatgtaccggagtggaagtgggacagtatctctatggattttgtgacgagtttaccgaacacttcga 20833371  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    | |||||||| || |||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||  ||||||| ||||||||||||||    
T  20833370 gggggcatgacgctatttgggttgttgtcgaccggttgacgaagtcggcacacttcattcctattaatatcagttatccggtagcgcagttggcagagat 20833271  T
Q  219 t 219  Q
    |    
T  20833270 t 20833270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 19652009 - 19652210
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-g 117  Q
    |||||||| ||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || || ||| |||| ||||||| |    
T  19652009 acatcagaggcctgcagggttgttgacaccgttggatgtgccggagtggaagtgggacagtatttctatggatttagtgacaagtataccgaacactccg 19652108  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    |||||||||||||||||||||||| || | ||| ||||||||||||||||||| |||||||| |||||| |||||||  |||||||||||||||| ||||    
T  19652109 agagggcatgatgccatttgggttattgtagacaggttgacgaagtcggcacacttcattccgattaatatcagttatccggtagcacagttggcggaga 19652208  T
Q  218 tt 219  Q
    ||    
T  19652209 tt 19652210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 11357832 - 11358032
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-ga 118  Q
    ||||||||||||| ||| |||||| ||||||| ||||||||||||||||||||||| ||||| ||||||||||| || ||||||||||| ||||||| ||    
T  11357832 catcagaagcctgcagggttgttggcaccgttagatgtaccggagtggaagtgggatagtatctctatggattttgtgacgagtttaccgaacactccga 11357931  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||||| || |||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||| |||  ||||||| ||||| ||||||||    
T  11357932 gagggcatgacgctatttgggtagttgtcgaccggttgacgaagtcggcacatttcattcctattaatatcaattatccggtagcgcagttagcagagat 11358031  T
Q  219 t 219  Q
    |    
T  11358032 t 11358032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 24642227 - 24642027
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| ||| |||||| ||||||||||||| ||||||||||||||||| || |||||||||||||| || ||||||||||| |||||| |||    
T  24642227 catcagaagcctgcagggttgttggcaccgttggatgtgccggagtggaagtgggatagcatttctatggattttgtgacgagtttaccgaacactccga 24642128  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||||||||||||||||| ||| ||||| ||||||||||||||||||| || ||||| |||||| |||||||  ||||||| |||||||| |||||    
T  24642127 gagggcatgatgccatttgggtggttgtcgacaggttgacgaagtcggcacactttattccaattaatatcagttatccggtagctcagttggcggagat 24642028  T
Q  219 t 219  Q
    |    
T  24642027 t 24642027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 219
Target Start/End: Complemental strand, 23277262 - 23277061
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| |||||||||| ||| ||||| ||||| ||||||||||| || |||||||||||||| || |||| |||||| |||||| |     
T  23277262 acatcagaagcctgcagggttgttgacactgttagatgtgccggaatggaagtgggatagcatttctatggattttgtgacgattttaccgaacactcca 23277163  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    |||||||||||||| || ||||||||  ||||| |||||||||||||||| || || ||||| |||||| |||||||  ||||||| |||||||| ||||    
T  23277162 agagggcatgatgctatatgggttgtggtcgacaggttgacgaagtcggcgcactttattccgattaatatcagttatccggtagcgcagttggcggaga 23277063  T
Q  218 tt 219  Q
    ||    
T  23277062 tt 23277061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 23 - 219
Target Start/End: Complemental strand, 12574835 - 12574638
Alignment:
Q  23 cagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cgagag 121  Q
    ||||| |||| ||||||||||||||| |||||||||||||||||||| ||||| || |||||||||||||| || |||||||||||||||||| |||| |    
T  12574835 cagaaacctgcaggattgttgacaccattggatgtaccggagtggaaatgggatagcatttctatggattttgtgacgagtttaccaaacactccgaggg 12574736  T
Q  122 ggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagatt 219  Q
    | |||||| | |||||||| ||  | ||  |||||||||||||||||||||| |||||||| ||  | |||||  ||||||| |||||||| ||||||    
T  12574735 gacatgattcgatttgggtagtggttgataggttgacgaagtcggcacattttattcctatcaacattagttatccggtagctcagttggctgagatt 12574638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 19 - 219
Target Start/End: Complemental strand, 24949075 - 24948874
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| ||||||| | |||||||||| ||||||| ||| ||||| || |||||||||||||| || ||||||||||| |||||| ||    
T  24949075 acatcagaagcctgcagggttgttgatatcgttggatgtgccggagttgaaatgggataggatttctatggattttgtgacgagtttaccgaacactccg 24948976  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    |||||||||||||| || ||||||||  ||||| |||||| ||||| ||| || || ||||| |||||| |||||||  ||||||| |||||||| ||||    
T  24948975 agagggcatgatgctatatgggttgtggtcgacaggttgatgaagttggcgcactttattccgattaatatcagttatccggtagctcagttggcggaga 24948876  T
Q  218 tt 219  Q
    ||    
T  24948875 tt 24948874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 23 - 219
Target Start/End: Complemental strand, 27788223 - 27788026
Alignment:
Q  23 cagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cgagag 121  Q
    ||||| |||| ||||||||||||||| |||||||||||||||||||| ||||| || |||||||||||||| || |||||||||||||||||| |||| |    
T  27788223 cagaaacctgcaggattgttgacaccattggatgtaccggagtggaaatgggatagcatttctatggattttgtgacgagtttaccaaacactccgaggg 27788124  T
Q  122 ggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagatt 219  Q
    | |||||| | |||||||| ||  | ||  |||||||||||||||||||||| |||||||| ||  | |||||  ||||||| |||||||| ||||||    
T  27788123 gacatgattcgatttgggtcgtggttgataggttgacgaagtcggcacattttattcctatcaacattagttatccggtagctcagttggctgagatt 27788026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 27210130 - 27210330
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||| || |||| ||||||||| || |  |||||||| || ||| |||    
T  27210130 catcagaggcctgcaggattgttgacaccgttggatgtaccggagtggaaatgggatagcatttatatggattttgtgataagtttacctaatactccga 27210229  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    | ||||||||| | || ||||||||  | ||| |||||||||||||||| || |||||||| |||||| |||||||  ||||||| |||||||| |||||    
T  27210230 gggggcatgattctatatgggttgtggtagacaggttgacgaagtcggcgcacttcattccgattaatatcagttatccggtagctcagttggcggagat 27210329  T
Q  219 t 219  Q
    |    
T  27210330 t 27210330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 38 - 219
Target Start/End: Original strand, 21125135 - 21125317
Alignment:
Q  38 ttgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-gagagggcatgatgccattt 136  Q
    |||||||||||||| ||||| || ||||||||||||||||  ||||| |||||||| || ||||||||||| || |||| |||||| |||| ||||||||    
T  21125135 ttgttgacaccgttagatgtgccagagtggaagtgggacaacatttccatggattttgtgacgagtttaccgaatactccgagaggacatggtgccattt 21125234  T
Q  137 gggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagatt 219  Q
    |||||||| ||||  ||||||||||||||||||| || ||||| || ||| | ||||   ||||||| |||||||| ||||||    
T  21125235 gggttgttttcgataggttgacgaagtcggcacactttattccgatcaatattagttttccggtagctcagttggcggagatt 21125317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 27365036 - 27365237
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| ||||||||||| |||||| ||||||||||||| ||||| ||||||||||||||||| || || |||||||| || ||| ||    
T  27365036 acatcagaagcctgcagggttgttgacaccattggatataccggagtggaaatgggatagtatttctatggattttgtgacaagtttacctaatactccg 27365135  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    ||||| |||||| | || ||||||||  ||||  | |||||||||||||| || || ||||| || ||| ||||||   |||| || |||||||| ||||    
T  27365136 agaggacatgattctatatgggttgtggtcgatagattgacgaagtcggcgcactttattccgataaatatcagttttccggtggctcagttggcggaga 27365235  T
Q  218 tt 219  Q
    ||    
T  27365236 tt 27365237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 23294421 - 23294315
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| |||||||||||||||||||| |||||||| |||||||| || |||||||||||||| || ||||||||||| |||||| ||    
T  23294421 acatcagaagcctgcagggttgttgacaccgttggatgtgccggagtgaaagtgggatagcatttctatggattttgtgacgagtttacctaacactccg 23294322  T
Q  118 agagggc 124  Q
    |||||||    
T  23294321 agagggc 23294315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 163
Target Start/End: Complemental strand, 23111221 - 23111076
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    ||||||||||||||  || ||||||||||| || ||||| || |||||||| ||||| |  || || |||||||| ||||| |||||||| || ||| |     
T  23111221 acatcagaagcctgctgggttgttgacaccattagatgtgccagagtggaaatgggataacatatccatggattttgtaacaagtttacccaatactcca 23111122  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagt 163  Q
    |||||||||||||| |||||||| ||| ||||  | ||||||||||    
T  23111121 agagggcatgatgctatttgggtagttgtcgatagattgacgaagt 23111076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 105
Target Start/End: Complemental strand, 45529997 - 45529911
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagttt 105  Q
    ||||||||| ||||  || ||||||||||| || ||||| |  |||||||||||||| ||||| || |||||||| || ||||||||    
T  45529997 acatcagaaacctgctgggttgttgacacctttagatgttctagagtggaagtgggatagtatgtccatggattttgtgacgagttt 45529911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 23817115 - 23817164
Alignment:
Q  133 atttgggttgttatcgaccggttgacgaagtcggcacatttcattcctat 182  Q
    ||||||||  || |||| ||||||||||||||||||||||| ||||||||    
T  23817115 atttgggtgattgtcgatcggttgacgaagtcggcacattttattcctat 23817164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 219
Target Start/End: Complemental strand, 23294315 - 23294243
Alignment:
Q  147 cgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagatt 219  Q
    |||| |||||||||||||||| || || ||||| |||||  |||||||  ||||||| |||||||| ||||||    
T  23294315 cgacaggttgacgaagtcggcgcactttattccgattaaaatcagttatccggtagctcagttggcggagatt 23294243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 133; Significance: 3e-69; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 41754 - 41954
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-ga 118  Q
    ||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||||||| ||    
T  41754 catcagaagcctgcagggttgttgacaccgttagatgtaccggagtggaagtgggacagtatctctatggattttgtgacgagtttaccgaacactccga 41853  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    | |||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||| ||||||||||||||    
T  41854 gggggcatgacgctatttgggttgttgtcgaccggttgacgaagtcggcacatttcattcctattaatatcagttatccggtagcgcagttggcagagat 41953  T
Q  219 t 219  Q
    |    
T  41954 t 41954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 46819 - 47020
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||| |  |||||||||||||| || ||||||||||| |||||| ||    
T  46819 acatcagaagcctgaagggttgttgacaccgttggatgtgccggagtggaagtgggataacatttctatggattttgtgacgagtttaccgaacactccg 46918  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    |||||||||||||| || ||||||||  || || |||||||||||||||| ||||| ||||| |||||| ||| |||  || ||||  ||||||| ||||    
T  46919 agagggcatgatgctatatgggttgtggtcaacaggttgacgaagtcggcgcattttattccgattaatatcaattatccgatagcttagttggcggaga 47018  T
Q  218 tt 219  Q
    ||    
T  47019 tt 47020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 129; Significance: 6e-67; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 27146 - 26946
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||| |||||| |||    
T  27146 catcagaagcctgcagggttgttgacaccgtttgatgtaccgtagtggaagtgggacagtatctctatggatttcgtgacgagtttaccgaacactccga 27047  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||||| ||  ||||||||||| ||||||||||||||||||||||||| ||||||||||| ||| |||||||  ||||||||||||||||||||||    
T  27046 gagggcatgacgctgtttgggttgttgtcgaccggttgacgaagtcggcacacttcattcctatcaatatcagttatccggtagcacagttggcagagat 26947  T
Q  219 t 219  Q
    |    
T  26946 t 26946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 117; Significance: 9e-60; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 13322 - 13522
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-ga 118  Q
    ||||||||||||| ||| |||||||| ||||| ||||| ||||||||||||||||||| ||||||||||||||| ||||| |||||||| ||||||| ||    
T  13322 catcagaagcctgcagggttgttgacgccgttagatgtgccggagtggaagtgggacaatatttctatggattttgtaacaagtttaccgaacactccga 13421  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    ||||||||||||||||||||||| || | ||| ||||||||||||||||||| |||||||| |||||| |||||||  |||||||||||||||| |||||    
T  13422 gagggcatgatgccatttgggttattgttgacaggttgacgaagtcggcacacttcattccgattaatatcagttatccggtagcacagttggcggagat 13521  T
Q  219 t 219  Q
    |    
T  13522 t 13522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 4373 - 4574
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||| ||||||| ||| |||||||||||||||||||| ||||||||||||||||| || |||||||||||||| || ||||||||||| |||||| ||    
T  4373 acatcaaaagcctgcagggttgttgacaccgttggatgtgccggagtggaagtgggatagcatttctatggattttgtgacgagtttaccgaacactccg 4472  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    |||||||||||||| || ||||||||  |||||  |||||| |||||||| || || ||||| |||||| | |||||  |||| || |||||||| ||||    
T  4473 agagggcatgatgctatatgggttgtggtcgacaagttgacaaagtcggcgcactttattccgattaatattagttatccggtggctcagttggcggaga 4572  T
Q  218 tt 219  Q
    ||    
T  4573 tt 4574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 68255 - 68055
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-ga 118  Q
    ||||||| ||||  ||| |||||||||||||||||||||| ||||||||| |||||||  ||||||||||| || || || |||||||| || |||| ||    
T  68255 catcagaggcctacagggttgttgacaccgttggatgtactggagtggaaatgggacaacatttctatggactttgtgacaagtttacctaatactccga 68156  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    ||||||||||| | || ||||||||  ||||| |||||||||||||||| || |||||||| |||||| |||||||  | ||||| ||||||||||||||    
T  68155 gagggcatgattctatatgggttgtggtcgacaggttgacgaagtcggcgcacttcattccgattaatatcagttatccagtagctcagttggcagagat 68056  T
Q  219 t 219  Q
    |    
T  68055 t 68055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 20 - 218
Target Start/End: Complemental strand, 3636 - 3437
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-ga 118  Q
    ||||||||| ||| ||| ||||||||||||||||||||  |||| |||||||||||||| |||||||||||||| || ||||||||||| ||||||| ||    
T  3636 catcagaagactgcagggttgttgacaccgttggatgtggcggaatggaagtgggacagcatttctatggattttgtgacgagtttaccgaacactctga 3537  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||| |||||| |||||||  ||||||| |||||||| |||||    
T  3536 gagggcatgatgccatttgggttgttgtcgacaggttgacgaagtcggcacattttattccaattaatatcagttatccggtagctcagttggcggagat 3437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1061 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: scaffold1061
Description:

Target: scaffold1061; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 20 - 218
Target Start/End: Complemental strand, 2473 - 2274
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    |||||||||||||| || || ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| || || |||||||| |||||| |||    
T  2473 catcagaagcctgttgggtttttgacaccgtttgatgtgccggagtggaagtgggacagtatttctatggattttgtgacaagtttaccgaacactccga 2374  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||||||||||||||||||||| ||||  ||||||||||||||||||| || ||||| |||||| |||||||  ||||||| |||||||| |||||    
T  2373 gagggcatgatgccatttgggttgttgtcgataggttgacgaagtcggcacactttattccgattaatatcagttatccggtagctcagttggcggagat 2274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 112; Significance: 9e-57; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 20 - 194
Target Start/End: Complemental strand, 20279 - 20104
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| ||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| || |||||||| |||||| |||    
T  20279 catcagaagcctgcagggttgttgacaccgttagatgtgccggagtggaagtgggacagtatttctatggatttcgtgacaagtttaccgaacactccga 20180  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagtta 194  Q
    |||||||||||| |||||||||| || ||||| |||||||||| |||||||| ||||||||||||||| |||||||    
T  20179 gagggcatgatgacatttgggttattgtcgacaggttgacgaaatcggcacacttcattcctattaatatcagtta 20104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 20 - 194
Target Start/End: Complemental strand, 23099 - 22924
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| ||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| || |||||||| |||||| |||    
T  23099 catcagaagcctgcagggttgttgacaccgttagatgtgccggagtggaagtgggacagtatttctatggatttcgtgacaagtttaccgaacactccga 23000  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagtta 194  Q
    |||||||||||| |||||||||| || ||||| |||||||||| |||||||| ||||||||||||||| |||||||    
T  22999 gagggcatgatgacatttgggttattgtcgacaggttgacgaaatcggcacacttcattcctattaatatcagtta 22924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 109; Significance: 5e-55; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 16134 - 16334
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||| |||||| |||    
T  16134 catcagaagcctgcagggttgttgacaccgttagatgtaccggagtggaagtgggacagtatctctatggattttgtgacgagtttaccgaacactccga 16233  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||| | || |||||||||||| ||||||||||||| ||||||||||| ||||||||||| ||| ||| |||  |||||||  |||| ||||||||    
T  16234 gagggcataacgctatttgggttgttgtcgaccggttgacaaagtcggcacacttcattcctatcaatatcaattatccggtagcgtagttagcagagat 16333  T
Q  219 t 219  Q
    |    
T  16334 t 16334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 109; Significance: 5e-55; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 57268 - 57468
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||| || |||||||||||||| || |||||||||||||||||| |||    
T  57268 catcagaagcctgcagggttgttgacaccgttggatgtaccggagtggaaatgggatagcatttctatggattttgtgacgagtttaccaaacactccga 57367  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||| |||||| | |||||||||||  ||||| |||||||||||||||| || ||||||||||||||  |||||||  ||||||| |||||||| |||||    
T  57368 gaggacatgattctatttgggttgtggtcgacaggttgacgaagtcggcgcacttcattcctattaacatcagttatccggtagctcagttggctgagat 57467  T
Q  219 t 219  Q
    |    
T  57468 t 57468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 168
Target Start/End: Original strand, 48455 - 48604
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| ||| |||||||||||||| ||| | || ||||||||||||||||  ||||| || ||||| || ||||||||||| || ||| |||    
T  48455 catcagaagcctgcagggttgttgacaccgttagatatgccagagtggaagtgggacaacatttccattgattttgtgacgagtttaccgaatactccga 48554  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggca 168  Q
    |||||||||||||||||||| ||||| ||||  |||||||||||||||||    
T  48555 gagggcatgatgccatttggattgttgtcgataggttgacgaagtcggca 48604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 28110 - 27910
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| | | |||||||||||||||||||| ||||||||||||||||| || |||||||||||||| || ||||||||||| |||||| |||    
T  28110 catcagaagcctgcacggttgttgacaccgttggatgtgccggagtggaagtgggatagcatttctatggattttgtgacgagtttaccgaacactccga 28011  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||| ||||||||||||||||| ||| ||||| |||||||||||||||| || || ||||| |||||| |||||||  || |||| ||||||||||||||    
T  28010 gaggacatgatgccatttgggtggttgtcgacaggttgacgaagtcggcgcactttattccgattaatatcagttatccgttagctcagttggcagagat 27911  T
Q  219 t 219  Q
    |    
T  27910 t 27910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 105; Significance: 1e-52; HSPs: 3)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 19 - 218
Target Start/End: Original strand, 51600 - 51800
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||| || |||||||||||||| || |||||||||||||||||| ||    
T  51600 acatcagaagcctgcagggttgttgacaccgttggatgtaccggagtggaaatgggatagcatttctatggattttgtgacgagtttaccaaacactccg 51699  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    |||||||||||| | || ||||||||  ||||  ||||||| ||||||||||| ||||||||||||||  |||||||  ||||||| |||||||| ||||    
T  51700 agagggcatgattctatatgggttgtggtcgataggttgacaaagtcggcacacttcattcctattaacatcagttatccggtagctcagttggctgaga 51799  T
Q  218 t 218  Q
    |    
T  51800 t 51800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 19 - 218
Target Start/End: Original strand, 60634 - 60834
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||| || |||||||||||||| || |||||||||||||||||| ||    
T  60634 acatcagaagcctgcagggttgttgacaccgttggatgtaccggagtggaaatgggatagcatttctatggattttgtgacgagtttaccaaacactccg 60733  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    |||||||||||| | || ||||||||  ||||  ||||||| ||||||||||| ||||||||||||||  |||||||  ||||||| |||||||| ||||    
T  60734 agagggcatgattctatatgggttgtggtcgataggttgacaaagtcggcacacttcattcctattaacatcagttatccggtagctcagttggctgaga 60833  T
Q  218 t 218  Q
    |    
T  60834 t 60834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 19 - 218
Target Start/End: Original strand, 67022 - 67222
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||| || |||||||||||||| || |||||||||||||||||| ||    
T  67022 acatcagaagcctgcagggttgttgacaccgttggatgtaccggagtggaaatgggatagcatttctatggattttgtgacgagtttaccaaacactccg 67121  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    |||||||||||| | || ||||||||  ||||  ||||||| ||||||||||| ||||||||||||||  |||||||  ||||||| |||||||| ||||    
T  67122 agagggcatgattctatatgggttgtggtcgataggttgacaaagtcggcacacttcattcctattaacatcagttatccggtagctcagttggctgaga 67221  T
Q  218 t 218  Q
    |    
T  67222 t 67222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 19 - 219
Target Start/End: Complemental strand, 20006 - 19805
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||| || || ||||||||||||||| ||    
T  20006 acatcagaagcctgcagggttgttgacaccgttggatgtaccggagtggaagtgggatagcatttctatggattttgtgacaagtttaccaaacactccg 19907  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagtta-ctcggtagcacagttggcagag 216  Q
    | |||||||||||| || ||||||||  ||||| ||||||| |||||||| || ||||||||||||||| ||||||| ||| ||||| |||||||| |||    
T  19906 aaagggcatgatgctatatgggttgtggtcgacaggttgacaaagtcggcgcacttcattcctattaatatcagttatctc-gtagctcagttggcggag 19808  T
Q  217 att 219  Q
    |||    
T  19807 att 19805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 102; Significance: 8e-51; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 13719 - 13920
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| | | ||||||||||||||||||||||| |||||||||||||| || |||||||||||||| || |||||||||||||||||| ||    
T  13719 acatcagaagcctgcaaggttgttgacaccgttggatgtaccagagtggaagtgggatagcatttctatggattttgtgacgagtttaccaaacactccg 13818  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    |||||||||||||| || ||||||||  ||||| |||||||||||||||| || || ||||| |||||  |||||||  ||||||| |||||||| ||||    
T  13819 agagggcatgatgctatatgggttgtggtcgacaggttgacgaagtcggcgcactttattccgattaacatcagttatccggtagctcagttggcggaga 13918  T
Q  218 tt 219  Q
    ||    
T  13919 tt 13920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 102; Significance: 8e-51; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 944 - 1145
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||   |||||||||||||| || ||||||||||| |||||| ||    
T  944 acatcagaagcctgcagggttgttgacaccgttggatgtgccggagtggaagtgggacctaatttctatggattttgtgacgagtttaccgaacactccg 1043  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    |||||||||||||| || ||||||||  ||||| ||||||||||||||||||| |  ||||| |||||| |||||||  ||||||| |||||||| ||||    
T  1044 agagggcatgatgctatatgggttgtggtcgacaggttgacgaagtcggcacactatattccgattaatatcagttatccggtagctcagttggcggaga 1143  T
Q  218 tt 219  Q
    ||    
T  1144 tt 1145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1646 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold1646
Description:

Target: scaffold1646; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 19 - 194
Target Start/End: Complemental strand, 210 - 34
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| || |||||||||||||| || |||||||||||||||||| ||    
T  210 acatcagaagcctgtagggttgttgacaccgttggatgtaccggagtggaaatgggatagcatttctatggattttgtgacgagtttaccaaacactccg 111  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagtta 194  Q
    |||||||||||| | || ||||||||  ||||  ||||||| ||||||||||| ||||||||||||||  |||||||    
T  110 agagggcatgattctatatgggttgtggtcgataggttgacaaagtcggcacacttcattcctattaacatcagtta 34  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0742 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0742
Description:

Target: scaffold0742; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 6098 - 5898
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||| || |||||||||||||| || |||||||||||||||||| |||    
T  6098 catcagaagcctgcaggtttgttgacaccgttggatgtaccggagtggaaatgggatagcatttctatggattttgtgacgagtttaccaaacactccga 5999  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||| |||||| | |||||||||||  ||||| |||||||||||||||| || ||||||||||||||  | |||||  | ||||| |||||||| |||||    
T  5998 gaggacatgattctatttgggttgtggtcgacaggttgacgaagtcggcgcacttcattcctattaacattagttatcctgtagctcagttggctgagat 5899  T
Q  219 t 219  Q
    |    
T  5898 t 5898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 19 - 210
Target Start/End: Original strand, 81252 - 81444
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||| || |||||||||||||| || |||||||||||||||||| ||    
T  81252 acatcagaagcctgcagggttgttgacaccgttggatgtaccggagtggaaatgggatagcatttctatggattttgtgacgagtttaccaaacactacg 81351  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttg 210  Q
    |||||||||||| | || ||||||||  ||||  ||||||| ||||||||||| ||||||||||||||  |||||||  ||||||| ||||||    
T  81352 agagggcatgattctatatgggttgtggtcgataggttgacaaagtcggcacacttcattcctattaacatcagttatccggtagctcagttg 81444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 101; Significance: 3e-50; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 20 - 211
Target Start/End: Complemental strand, 149455 - 149263
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-ga 118  Q
    ||||||||||||| ||| |||||||||||||||||||| | |||||| || |||||||| |||||||||||||| || ||||||||||  ||||||| ||    
T  149455 catcagaagcctgcagggttgttgacaccgttggatgtgctggagtgtaattgggacagcatttctatggattttgtgacgagtttactgaacactccga 149356  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttgg 211  Q
    ||||||||||| |||| ||||||||  ||||| |||||||||||||||||||||||||||| |||||| |||||||  ||||||| |||||||    
T  149355 gagggcatgattccatatgggttgtggtcgacaggttgacgaagtcggcacatttcattccgattaatatcagttatccggtagctcagttgg 149263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 19 - 216
Target Start/End: Original strand, 195124 - 195322
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-g 117  Q
    |||||||||||||  ||| |||||||||||||||||||| ||||||||||||| ||| || |||||||||||||| || ||||||||||| ||||||| |    
T  195124 acatcagaagcctacagggttgttgacaccgttggatgtgccggagtggaagttggatagcatttctatggattttgtgacgagtttaccgaacactctg 195223  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagag 216  Q
    |||||||||||||| || ||||||||  ||||| ||||||| |||||||| || || ||||| |||||| ||| |||  ||||||| ||||| ||||||    
T  195224 agagggcatgatgctatatgggttgtggtcgacaggttgacaaagtcggcgcactttattccgattaatatcatttatccggtagctcagttagcagag 195322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 193
Target Start/End: Original strand, 25954 - 26128
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-ga 118  Q
    |||||||| | || ||| ||| ||||||| || |||||||| |||||||| ||| | || || || |||||||| || |||||||| || || |||| ||    
T  25954 catcagaaacttgcagggttgatgacacctttagatgtaccagagtggaaatggcatagcatatccatggattttgtgacgagtttgccgaatactccga 26053  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagtt 193  Q
     |||| |||| || ||||||||  |||| ||  | |||||||||||||| ||||| ||||| |||||| ||||||    
T  26054 aagggaatgacgcgatttgggtgattattgatagattgacgaagtcggctcattttattccgattaatatcagtt 26128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 219
Target Start/End: Complemental strand, 41803 - 41602
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| |||||||||||||||||| | ||||||||||||||||| || ||||||||||||||||| ||||||||||| |||||| ||    
T  41803 acatcagaagcctgcagggttgttgacaccgttggatatgccggagtggaagtgggatagcatttctatggatttcgtgacgagtttacctaacactccg 41704  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    |||||||||||| | || ||||||||  ||||| |||||| ||||||||| || || ||||| |||||| |||||||  ||||||| |||||||| ||||    
T  41703 agagggcatgattctatatgggttgtggtcgacaggttgatgaagtcggcgcactttattccgattaatatcagttatccggtagctcagttggcggaga 41604  T
Q  218 tt 219  Q
    ||    
T  41603 tt 41602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 98; Significance: 2e-48; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 219
Target Start/End: Complemental strand, 44391 - 44190
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||| || |||||||||||||| ||||||||||||||||||||| ||    
T  44391 acatcagaagcctgcagggttgttgacaccgttggatgtaccggagtggaaatgggatagcatttctatggattttgtaacgagtttaccaaacactccg 44292  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    |||||||||||| | || ||||||||  ||||  ||||||| ||||||| ||| ||||| ||||||||  | |||||  ||||||| |||||||| ||||    
T  44291 agagggcatgattctatatgggttgtggtcgataggttgacaaagtcggaacacttcatccctattaacatgagttatccggtagctcagttggctgaga 44192  T
Q  218 tt 219  Q
    ||    
T  44191 tt 44190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 219
Target Start/End: Complemental strand, 45403 - 45202
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||| || |||||||||||||| ||||||||||||||||||||| ||    
T  45403 acatcagaagcctgcagggttgttgacaccgttggatgtaccggagtggaaatgggatagcatttctatggattttgtaacgagtttaccaaacactccg 45304  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    |||||||||||| | || ||||||||  ||||  ||||||| ||||||| ||| ||||| ||||||||  | |||||  ||||||| |||||||| ||||    
T  45303 agagggcatgattctatatgggttgtggtcgataggttgacaaagtcggaacacttcatccctattaacatgagttatccggtagctcagttggctgaga 45204  T
Q  218 tt 219  Q
    ||    
T  45203 tt 45202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 98; Significance: 2e-48; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 56320 - 56521
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| |||||||||||||||||||| |||||||||||||| || || |||||||||||||| |   | ||||||||||||||| ||    
T  56320 acatcagaagcctgcagggttgttgacaccgttggatgtgccggagtggaagtgagatagcatttctatggatttggagccaagtttaccaaacacttcg 56419  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    |||||| ||||||| || ||||||||  ||||| |||||||||||||||| || ||||||||||||||| | |||||  |||||||||||||||| ||||    
T  56420 agagggtatgatgctatatgggttgtggtcgacaggttgacgaagtcggcgcacttcattcctattaatattagttatccggtagcacagttggcggaga 56519  T
Q  218 tt 219  Q
    ||    
T  56520 tt 56521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 33097 - 33298
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    ||||||||| |||| ||| ||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||| || || |||||||| || ||| ||    
T  33097 acatcagaaacctgcagggttgttgacaccattggatgtaccggagtggaaatgggatagtatttctatggattttgtgacaagtttacctaatactccg 33196  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    ||||| |||||| | || ||||||||  ||||  | |||||||||||||| || || ||||| || ||| ||||||   |||| || |||||||| ||||    
T  33197 agaggacatgattctatatgggttgtggtcgatagattgacgaagtcggcgcactttattccgataaatatcagttttccggtggctcagttggcggaga 33296  T
Q  218 tt 219  Q
    ||    
T  33297 tt 33298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 98; Significance: 2e-48; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 219
Target Start/End: Complemental strand, 323590 - 323389
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||| |||| || ||| |||||||||||||||||||| ||||||||||||||||| |  |||||||||||||| || |||||||||||||||||| ||    
T  323590 acatcaaaagcttgcagggttgttgacaccgttggatgtgccggagtggaagtgggataacatttctatggattttgtgacgagtttaccaaacactccg 323491  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    |||||||||||||| || ||||||||  |||||  ||||||||||||||| || |||||||| |||||| |||||||  ||||||| |||||||| ||||    
T  323490 agagggcatgatgctatatgggttgtggtcgacaagttgacgaagtcggcgcacttcattccgattaatatcagttatccggtagctcagttggcggaga 323391  T
Q  218 tt 219  Q
    ||    
T  323390 tt 323389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 219
Target Start/End: Complemental strand, 118454 - 118253
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||   ||||||||||||||| || ||||||||||| |||||| ||    
T  118454 acatcagaagcctgcagggttgttgacaccgttggatgtgccggagtggaagtgggattttatttctatggattttgtgacgagtttacctaacactccg 118355  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    |||||||||||||| || ||||||||  |||||  ||||| ||||||||| || || ||||| |||||| |||||||  ||||||| |||||||| ||||    
T  118354 agagggcatgatgctatatgggttgtggtcgacatgttgatgaagtcggcgcactttattccgattaatatcagttatccggtagcgcagttggcggaga 118255  T
Q  218 tt 219  Q
    ||    
T  118254 tt 118253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 179
Target Start/End: Original strand, 202888 - 203049
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    ||||||||||||||  || ||||||||| |||| ||||| ||||||||||| | ||| || || || |||||||| ||||| |||||||| || ||| ||    
T  202888 acatcagaagcctgctgggttgttgacatcgttagatgtgccggagtggaaataggatagcatatccatggattttgtaacaagtttaccgaatactccg 202987  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcc 179  Q
    |||||||||||| |||||||||| ||| | ||  | ||||||||||||||||| || |||||    
T  202988 agagggcatgataccatttgggtggttgttgatagattgacgaagtcggcacactttattcc 203049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 5635 - 5435
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| ||| |||||||||||||| ||||| || || |||||||||||||  ||||| |||||||| || ||||||||||| || | | |||    
T  5635 catcagaagcctgcagggttgttgacaccgttagatgtgccagactggaagtgggacaacatttccatggattttgtgacgagtttaccgaataatacga 5536  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||||||||||||||||||||| ||||| |||||||||||| |||||| ||||||||||||||| |||||||  ||||||| ||||| || |||||    
T  5535 gagggcatgatgccatttgggttgttgtcgacaggttgacgaagttggcacacttcattcctattaatatcagttatccggtagctcagttagcggagat 5436  T
Q  219 t 219  Q
    |    
T  5435 t 5435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 17958 - 18158
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| |||||||||||||||||| |||||  | ||||| ||||||||||| ||||| ||||||||||||||||||||||| |||||| |||    
T  17958 catcagaagcctgcaggattgttgacaccgttagatgtggcagagtgaaagtgggacagcatttccatggatttcgtaacgagtttaccgaacactccga 18057  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||||||||||||||||||||| |||||  |||||| ||||||||||| || ||||| || ||| | |||||  | ||||| |||||||| |||||    
T  18058 gagggcatgatgccatttgggttgttgtcgacaagttgacaaagtcggcacactttattccgatcaatattagttatccagtagctcagttggcggagat 18157  T
Q  219 t 219  Q
    |    
T  18158 t 18158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 97; Significance: 8e-48; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 14618 - 14818
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||| ||| ||| |||||||||||||||||||| |||||||||||||||||||  |||||||||||||| || |||||| |||| |||||| |||    
T  14618 catcagaagactgcagggttgttgacaccgttggatgtgccggagtggaagtgggacaacatttctatggattttgtgacgagtctaccgaacactccga 14717  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||||||||||||||||| ||| ||||| ||||||||||||||||||| || ||||| || ||| | |||||  ||||||| |||||| | |||||    
T  14718 gagggcatgatgccatttgggtggttgtcgacaggttgacgaagtcggcacaatttattccgatcaatcttagttatccggtagctcagttgccggagat 14817  T
Q  219 t 219  Q
    |    
T  14818 t 14818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 22797 - 22997
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||| |||  || |||||||||||||||||||| |||||||||||||||||||  |||||||||||||| || |||||| |||| |||||| |||    
T  22797 catcagaagactgctgggttgttgacaccgttggatgtgccggagtggaagtgggacaacatttctatggattttgtgacgagtctaccgaacactccga 22896  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||||||||||||||||| ||| ||||| ||||||||||||||||||| || ||||| || ||| | |||||  ||||||| |||||| | |||||    
T  22897 gagggcatgatgccatttgggtggttgtcgacaggttgacgaagtcggcacaatttattccgatcaatcttagttatccggtagctcagttgccggagat 22996  T
Q  219 t 219  Q
    |    
T  22997 t 22997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 100972 - 101127
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||| ||||||||| |     
T  100972 acatcagaagcctgcagggttgttgacaccgttggatgtaccggagtggaagtgggacaatatttctatggattttgtgacgagtttgccaaacactcca 101071  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacattt 173  Q
    ||||||||||||||||||||||| ||  | ||  ||||||||||||||||||||||    
T  101072 agagggcatgatgccatttgggtcgtggtagataggttgacgaagtcggcacattt 101127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 19 - 212
Target Start/End: Original strand, 6658 - 6852
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||| || |||||||||||||| || ||||||||||| || ||| ||    
T  6658 acatcagaagcctgcagggttgttgacaccgctggatgtaccggagtggaagtgggatagcatttctatggattttgtgacgagtttaccgaatactccg 6757  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggc 212  Q
    |||||||||||||| || ||||||||  ||||| |||||||||||||||| || || ||||  |||||| |||||||  ||||||| ||||||||    
T  6758 agagggcatgatgctatatgggttgtggtcgacaggttgacgaagtcggcgcactttattctgattaatatcagttatccggtagctcagttggc 6852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 95; Significance: 1e-46; HSPs: 5)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 20 - 209
Target Start/End: Complemental strand, 20868 - 20678
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||  ||| ||| |||||||||||||||| |||||||||||||||||||  ||||||||||||||  | ||||||||||| |||||| |||    
T  20868 catcagaagcctacagggttgatgacaccgttggatgtgccggagtggaagtgggacaacatttctatggattttatgacgagtttaccgaacactccga 20769  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagtt 209  Q
    ||||||||||| |||||||||||||| | ||| |||||||||||||||| || || ||||| |||||| |||||||| ||||||| |||||    
T  20768 gagggcatgattccatttgggttgttgttgacaggttgacgaagtcggcgcactttattccgattaatatcagttacccggtagctcagtt 20678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 11477 - 11565
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttac 107  Q
    |||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||| || |||||||||||||| || ||||||||||    
T  11477 acatcagaagcctgcagggttgttgacaccgttggatgtgccggagtggaagtgggatagcatttctatggattttgtgacgagtttac 11565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 15247 - 15335
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttac 107  Q
    |||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||| || |||||||||||||| || ||||||||||    
T  15247 acatcagaagcctgcagggttgttgacaccgttggatgtgccggagtggaagtgggatagcatttctatggattttgtgacgagtttac 15335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 118 - 219
Target Start/End: Original strand, 12881 - 12982
Alignment:
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    |||||||||||||| || ||||||||  ||||| |||||||||||||||| || || ||| | |||||| |||||||  ||||||| |||||||| ||||    
T  12881 agagggcatgatgctatatgggttgtggtcgacaggttgacgaagtcggcgcactttatttcgattaatatcagttatccggtagctcagttggcggaga 12980  T
Q  218 tt 219  Q
    ||    
T  12981 tt 12982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 118 - 219
Target Start/End: Original strand, 16651 - 16752
Alignment:
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    |||||||||||||| || ||||||||  ||||| |||||||||||||||| || || ||| | |||||| |||||||  ||||||| |||||||| ||||    
T  16651 agagggcatgatgctatatgggttgtggtcgacaggttgacgaagtcggcgcactttatttcgattaatatcagttatccggtagctcagttggcggaga 16750  T
Q  218 tt 219  Q
    ||    
T  16751 tt 16752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 94; Significance: 5e-46; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 2775 - 2976
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||| ||||||||| ||| |||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||| || |||||| || |||||||| |     
T  2775 acataagaagcctgcagggttgttgacaccgttagatgtgccggagtggaagtgggatagtatttctatgaattttgtgacgagtatagcaaacactcca 2874  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    |||||||| ||||| || | ||||||||||||| |||||||||||||||| || ||||||||||||||| |||||||   ||||||| ||||||| ||||    
T  2875 agagggcacgatgctatataggttgttatcgacaggttgacgaagtcggcgcacttcattcctattaatatcagttatctggtagcatagttggcggaga 2974  T
Q  218 tt 219  Q
    ||    
T  2975 tt 2976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 211
Target Start/End: Complemental strand, 7946 - 7753
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||| || |||||| ||||||| || |||||||||||||||||| ||    
T  7946 acatcagaagcctgcagggttgttgacaccgttggatgtgccggagtggaagtgggatagcatttctctggattttgtgacgagtttaccaaacactccg 7847  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttgg 211  Q
    |||||||||||||| || ||||||||  |||||  ||||| ||||||||| || || ||||| |||||| |||||||   |||||| |||||||    
T  7846 agagggcatgatgctatatgggttgtggtcgacaagttgatgaagtcggcgcactttattccgattaatatcagttatctggtagctcagttgg 7753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 4872 - 5073
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| ||||||||||||||||||||| |||||||||| ||||| |  |||||||||||||| || |||||||||||||||||| ||    
T  4872 acatcagaagcctgcagggttgttgacaccgttggatgtatcggagtggaaatgggataacatttctatggattttgtgacgagtttaccaaacactccg 4971  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    |||||||||||| | || ||| ||||  ||||  ||||||| ||||||||||| ||||||||||||||  |||||||  ||||||| |||||||| ||||    
T  4972 agagggcatgattctatatggattgtggtcgataggttgacaaagtcggcacacttcattcctattaacatcagttatccggtagctcagttggctgaga 5071  T
Q  218 tt 219  Q
    ||    
T  5072 tt 5073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 48627 - 48828
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| | | |||||||||||||||||||||||||||||||| ||||| || |||||||||||||| || || ||||||||||||||| ||    
T  48627 acatcagaagcctgcatggttgttgacaccgttggatgtaccggagtggaaatgggatagcatttctatggatttagtgacaagtttaccaaacactccg 48726  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    |||||||||||| | || ||||||||  ||||  ||||||| ||||||||||| ||||||||||||||  |||||||   |||||| |||||||| ||||    
T  48727 agagggcatgattctatatgggttgtggtcgataggttgacaaagtcggcacacttcattcctattaacatcagttatctggtagctcagttggctgaga 48826  T
Q  218 tt 219  Q
    ||    
T  48827 tt 48828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 21 - 212
Target Start/End: Original strand, 5757 - 5949
Alignment:
Q  21 atcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cgag 119  Q
    |||||||||||  ||| |||||||||||||||||||||||||||||||| ||||| || |||||||||||||| || |||||||||||||||||| ||||    
T  5757 atcagaagcctacagggttgttgacaccgttggatgtaccggagtggaaatgggatagcatttctatggattttgtgacgagtttaccaaacactccgag 5856  T
Q  120 agggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggc 212  Q
    |||||||||| | || ||||||||  ||||  ||||||| |||||| |||| ||||||||||||||  |||||||  ||||||| ||||||||    
T  5857 agggcatgattctatatgggttgtggtcgataggttgacaaagtcgacacacttcattcctattaacatcagttatccggtagctcagttggc 5949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 40623 - 40423
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-ga 118  Q
    ||||| ||||||| ||| |||||||||||||| ||||| || ||||||||||||||||  ||||| |||||||| || ||||||||||| || |||| ||    
T  40623 catcaaaagcctgcagggttgttgacaccgttagatgtgccagagtggaagtgggacaacatttccatggattttgtgacgagtttaccgaatactccga 40524  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||| || ||||| || ||| | |||||  ||||||| |||||||| |||||    
T  40523 gagggcatgatgccatttgggttgttgtcgacaggttgacgaagtcggcacactttattccgatcaatattagttatccggtagctcagttggcggagat 40424  T
Q  219 t 219  Q
    |    
T  40423 t 40423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 19 - 218
Target Start/End: Original strand, 25285 - 25485
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||| ||| ||| || ||||||||||||||||| ||||||||||||||||| |  |||||||||||||| || ||||||||||| |||||| ||    
T  25285 acatcagaagtctgcagggtttttgacaccgttggatgtgccggagtggaagtgggaaaacatttctatggattttgtgacgagtttaccgaacactccg 25384  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    ||||||||||||||||||||||||||  | ||| ||||||||||||| || || || ||||| |||| | |||||||  ||||||| |||||||| ||||    
T  25385 agagggcatgatgccatttgggttgtggttgacaggttgacgaagtcagcgcactttattccaattattatcagttatccggtagctcagttggcggaga 25484  T
Q  218 t 218  Q
    |    
T  25485 t 25485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 219
Target Start/End: Complemental strand, 113445 - 113244
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| ||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||| |||||| ||||||||||| ||    
T  113445 acatcagaagcctgcagggttgttgacaccattggatgtaccggagtggaaatgggatagtatttctatggatttcgtgacgagtctaccaaacactccg 113346  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    ||||| |||||| | || ||||||||  ||||  | |||||||||||||| || || ||||| || ||| ||||||   |||| || |||||||||||||    
T  113345 agaggacatgattcaatatgggttgtagtcgatagattgacgaagtcggcgcactttattccaataaatatcagttttacggtggcgcagttggcagaga 113246  T
Q  218 tt 219  Q
    ||    
T  113245 tt 113244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 19 - 212
Target Start/End: Original strand, 95422 - 95616
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaaca-ctcg 117  Q
    |||||||| ||| | ||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| || |||||||| || | | ||    
T  95422 acatcagaggcccgcaggtttgttgacaccgttggatgtaccggagtggaaatgggatagtatttctatggatttcgtgacaagtttacccaataccccg 95521  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggc 212  Q
    ||||| || ||| | || ||||||||| | ||| |||||||||||||||| || |||||||| |||||| | |||||| | ||||| ||||||||    
T  95522 agaggacacgattctatatgggttgttgttgacaggttgacgaagtcggcgcacttcattccgattaatataagttacccagtagctcagttggc 95616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0682 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0682
Description:

Target: scaffold0682; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 768 - 568
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||| ||||| |||||||||||| ||||||||||||||||||||||| |||||||  |||||||||||||| || || |||||||| || ||| | |    
T  768 catcagaggcctgcaggattgttgacgccgttggatgtaccggagtggaaatgggacaacatttctatggattttgtgacaagtttacctaatactccaa 669  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    ||||||||||| | || ||||||||  ||||| |||||||||| ||||| || |||||||| |||||| |||||||  | ||||| ||||||||||||||    
T  668 gagggcatgattctatatgggttgtggtcgacaggttgacgaaatcggcgcacttcattccgattaatatcagttatccagtagctcagttggcagagat 569  T
Q  219 t 219  Q
    |    
T  568 t 568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 20 - 219
Target Start/End: Original strand, 51284 - 51484
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| ||| |||||||||||||| ||||| || ||||||||||||||||| ||||| |||||||| || ||||||||||| || ||| |||    
T  51284 catcagaagcctgcagggttgttgacaccgttagatgtgccagagtggaagtgggacagcatttccatggattttgtgacgagtttaccgaatactccga 51383  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    || ||||||||||||||||||||||| ||||  |||||||||||||| |||| || ||||| || ||| | ||||   ||||||| |||||||| |||||    
T  51384 gaaggcatgatgccatttgggttgttgtcgataggttgacgaagtcgtcacactttattccgatcaatattagttttccggtagctcagttggcggagat 51483  T
Q  219 t 219  Q
    |    
T  51484 t 51484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1710 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold1710
Description:

Target: scaffold1710; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 19 - 219
Target Start/End: Complemental strand, 750 - 549
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacac-tcg 117  Q
    |||||||||||||| ||| |||||| ||||||||||||| ||| ||||||||||||| |  |||||||||||||| || ||||||||||| ||||| |||    
T  750 acatcagaagcctgcagggttgttgtcaccgttggatgtgccgaagtggaagtgggataacatttctatggattttgtgacgagtttaccgaacacttcg 651  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    |||||||||||| | || ||||||||  |||||  ||||||||||||||| || || ||||| |||||| |||||||   |||||| |||||||| ||||    
T  650 agagggcatgatactatatgggttgtggtcgacaagttgacgaagtcggcgcactttattccgattaatatcagttatctggtagctcagttggcggaga 551  T
Q  218 tt 219  Q
    ||    
T  550 tt 549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0518 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 19 - 219
Target Start/End: Complemental strand, 11655 - 11454
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| ||||||||||||||||||||| |||||||||| ||||| |  |||||||||||||| || |||||||||||||||||| ||    
T  11655 acatcagaagcctgcagggttgttgacaccgttggatgtatcggagtggaaatgggataacatttctatggattttgtgacgagtttaccaaacactccg 11556  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    ||||||  |||| | || ||| ||||  ||||  ||||||| ||||||| ||| ||||||||||||||  |||||||  ||||||| |||||||| ||||    
T  11555 agagggtttgattctatatggtttgtggtcgataggttgacaaagtcggtacacttcattcctattaacatcagttatccggtagctcagttggctgaga 11456  T
Q  218 tt 219  Q
    ||    
T  11455 tt 11454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 19 - 219
Target Start/End: Complemental strand, 261194 - 260993
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-g 117  Q
    |||||||||||||| ||| |||||||| ||||||||||||||||||||||| ||||| || |||||||||||||| || ||||||||||||||||||| |    
T  261194 acatcagaagcctgcagggttgttgacgccgttggatgtaccggagtggaaatgggatagcatttctatggattttgtgacgagtttaccaaacactctg 261095  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    ||||| |||||| | || ||||||||  ||||  ||||||| ||||||||||| || |||||||| ||  |||||||  || |||| || ||||| ||||    
T  261094 agaggacatgattctatatgggttgtggtcgataggttgacaaagtcggcacactttattcctatcaacatcagttatccgatagctcaattggctgaga 260995  T
Q  218 tt 219  Q
    ||    
T  260994 tt 260993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 2679 - 2479
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| ||| |||||||||||||| ||||| || |||| |||||||||||  ||||| |||||||| || ||||||||||| |||||| |||    
T  2679 catcagaagcctgcagggttgttgacaccgttagatgtgccagagtagaagtgggacaacatttccatggattttgtgacgagtttaccgaacactccga 2580  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    ||||||| |||||||||||||| ||| ||||| |||||||||||||  |||| || ||||| || |||   |||||  ||||||| ||||||||||||||    
T  2579 gagggcacgatgccatttgggtggttgtcgacaggttgacgaagtcaacacactttattccgatcaataatagttatccggtagctcagttggcagagat 2480  T
Q  219 t 219  Q
    |    
T  2479 t 2479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 7069 - 6869
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||| ||||| ||||  ||||||||| |||||||||||||||||||| ||||| || |||||||||||||| || || |||||||| || ||| |||    
T  7069 catcagaggcctgcaggaaagttgacaccattggatgtaccggagtggaaatgggatagcatttctatggattttgtgacaagtttacctaatactccga 6970  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    | ||||||||| |||| ||||||||  | ||| |||||||||||||||| || |||||||| |||||| |||||||  ||||||| |||||||| |||||    
T  6969 gggggcatgattccatatgggttgtggtagacaggttgacgaagtcggcgcacttcattccgattaatatcagttatccggtagctcagttggcggagat 6870  T
Q  219 t 219  Q
    |    
T  6869 t 6869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 179
Target Start/End: Complemental strand, 5315 - 5155
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-ga 118  Q
    ||||||||||||| ||| |||||||||||||| ||||| ||  |||||||||||||||  || || |||||||| || ||||||||||| || |||| ||    
T  5315 catcagaagcctgcagggttgttgacaccgttagatgtgccatagtggaagtgggacaacatctccatggattttgtgacgagtttaccgaatactccga 5216  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcc 179  Q
    |||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||||    
T  5215 gagggcatgatgccatttgggttgttgtcgataggttgacgaagtcggcacattttattcc 5155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 20 - 179
Target Start/End: Original strand, 570 - 730
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-ga 118  Q
    ||||||||||||| ||| |||||||||||||| ||||| || ||||| |||||||| || ||||| |||||||| || ||||||||||  || |||| ||    
T  570 catcagaagcctgcagggttgttgacaccgttagatgtgccagagtgaaagtgggatagcatttccatggattttgtgacgagtttactgaatactccga 669  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcc 179  Q
    |||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||||    
T  670 gagggcatgatgccatttgggttgttgtcgataggttgacgaagtcggcacattttattcc 730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 38 - 219
Target Start/End: Complemental strand, 115052 - 114870
Alignment:
Q  38 ttgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cgagagggcatgatgccattt 136  Q
    |||||||||||||||||||| | ||||||||||||| | || |||||||||||||| || ||||||||||| |||||| |||||||||||||||| || |    
T  115052 ttgttgacaccgttggatgtgctggagtggaagtggaatagcatttctatggattttgtgacgagtttaccgaacactccgagagggcatgatgctatat 114953  T
Q  137 gggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagatt 219  Q
    |||||||  | ||| | |||||||||||||| || || ||||| |||||| |||||||  ||||||| |||||||| ||||||    
T  114952 gggttgtggttgacagattgacgaagtcggcgcactttattccgattaatatcagttatccggtagctcagttggcggagatt 114870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 6456 - 6657
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||| ||||||||| |||||||||||||||||| ||| | || ||||||||||||||||| || || |||||||| || ||||||||||| || ||| ||    
T  6456 acatgagaagcctgcaggattgttgacaccgttagattttccagagtggaagtgggacagcatctccatggattttgtgacgagtttaccgaatactccg 6555  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    |||||||||||| |||||||||||||| ||||  |||||||||||||||| ||||| || || || ||| | ||||   ||||||| |||||||| ||||    
T  6556 agagggcatgataccatttgggttgttgtcgataggttgacgaagtcggcgcattttatcccgatcaatattagttttccggtagctcagttggcggaga 6655  T
Q  218 tt 219  Q
    ||    
T  6656 tt 6657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 10877 - 11078
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||| ||||| ||| |||||||||||||||||||| ||||||||||||||||| || |||||||||||||| || |||||| |||| |||||| ||    
T  10877 acatcagaggcctgcagggttgttgacaccgttggatgtgccggagtggaagtgggatagcatttctatggattttgtgacgagtctacctaacactccg 10976  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    |||||||||||||| || ||||||||  |||||   ||||| |||| ||| || || ||| | |||||| |||||||  ||||||| |||||||| ||||    
T  10977 agagggcatgatgcgatatgggttgtggtcgacaaattgacaaagttggcgcactttatttcgattaatatcagttatccggtagctcagttggcggaga 11076  T
Q  218 tt 219  Q
    ||    
T  11077 tt 11078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 21091 - 21292
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||| ||||| ||| |||||||||||||||||||| ||||||||||||||||| || |||||||||||||| || |||||| |||| |||||| ||    
T  21091 acatcagaggcctgcagggttgttgacaccgttggatgtgccggagtggaagtgggatagcatttctatggattttgtgacgagtctacctaacactccg 21190  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    |||||||||||||| || ||||||||  |||||   ||||| |||| ||| || || ||| | |||||| |||||||  ||||||| |||||||| ||||    
T  21191 agagggcatgatgcgatatgggttgtggtcgacaaattgacaaagttggcgcactttatttcgattaatatcagttatccggtagctcagttggcggaga 21290  T
Q  218 tt 219  Q
    ||    
T  21291 tt 21292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 32295 - 32170
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    |||||||| ||||||||  ||||||||||||||||||| | |||||||||||||||||  |||||||||||||| || ||||||||||| |||||| |||    
T  32295 catcagaatcctgtagggctgttgacaccgttggatgtgcaggagtggaagtgggacaacatttctatggattttgtgacgagtttaccgaacactccga 32196  T
Q  119 gagggcatgatgccatttgggttgtt 144  Q
    ||||||||||||||||||||||||||    
T  32195 gagggcatgatgccatttgggttgtt 32170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 3676 - 3476
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||  ||||| |||||||| || ||||||||||| |||||| | |    
T  3676 catcagaagcctgtagggttgttgacaccgttagatgtgccggagtggaagtgggacaacatttccatggattttgtgacgagtttaccgaacactccca 3577  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    |||||| ||||||||||||||| ||| ||||  ||||||| ||||| || || || ||||| || ||| | |||||  || |||| |||||||| |||||    
T  3576 gagggcgtgatgccatttgggtggttgtcgataggttgacaaagtccgcgcactttattccgatcaatattagttatccgatagctcagttggcggagat 3477  T
Q  219 t 219  Q
    |    
T  3476 t 3476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 23 - 219
Target Start/End: Original strand, 6660 - 6858
Alignment:
Q  23 cagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttc-gtaacgagtttaccaaacactc-gaga 120  Q
    |||||||||| | | ||||||||||| || ||||| |||||||||||||||||||| ||||| ||||||||  || ||||||||||| ||||||| ||||    
T  6660 cagaagcctgcaaggttgttgacaccattagatgtgccggagtggaagtgggacagcatttccatggatttttgtgacgagtttaccgaacactccgaga 6759  T
Q  121 gggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagatt 219  Q
    |||||||||||||||||||||||  ||||  ||||||| |||||||| || || ||||  || ||||| |||||  ||||||| |||||||| ||||||    
T  6760 gggcatgatgccatttgggttgtggtcgataggttgacaaagtcggcgcactttattctgatcaatgttagttatccggtagctcagttggcggagatt 6858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 23 - 219
Target Start/End: Original strand, 11091 - 11289
Alignment:
Q  23 cagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttc-gtaacgagtttaccaaacactc-gaga 120  Q
    |||||||||| | | ||||||||||| || ||||| |||||||||||||||||||| ||||| ||||||||  || ||||||||||| ||||||| ||||    
T  11091 cagaagcctgcaaggttgttgacaccattagatgtgccggagtggaagtgggacagcatttccatggatttttgtgacgagtttaccgaacactccgaga 11190  T
Q  121 gggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagatt 219  Q
    |||||||||||||||||||||||  ||||  ||||||| |||||||| || || ||||  || ||||| |||||  ||||||| |||||||| ||||||    
T  11191 gggcatgatgccatttgggttgtggtcgataggttgacaaagtcggcgcactttattctgatcaatgttagttatccggtagctcagttggcggagatt 11289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 179
Target Start/End: Original strand, 1393 - 1553
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| ||| ||||||||||| || ||||| || |||||||||||||| || ||||| ||||||||  | ||||||||||| || ||| |||    
T  1393 catcagaagcctgcagggttgttgacaccattagatgtgccagagtggaagtgggatagcatttccatggattttatgacgagtttaccgaatactccga 1492  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcc 179  Q
    |||||||||||||||||||||||| | ||||  |||||||||||| ||||||||| |||||    
T  1493 gagggcatgatgccatttgggttgctgtcgataggttgacgaagtaggcacattttattcc 1553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 219
Target Start/End: Original strand, 12211 - 12406
Alignment:
Q  24 agaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cgagagg 122  Q
    ||||||||| ||| |||||||| |||||||||||||| |||||||| ||||| || ||||||||||||||||| |||| ||||||||||||| |||||||    
T  12211 agaagcctgcagggttgttgac-ccgttggatgtaccagagtggaaatgggatagcatttctatggatttcgtgacgattttaccaaacactccgagagg 12309  T
Q  123 gcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagatt 219  Q
     |||||| | |||||||||||  ||||| |||||||||||||| | || ||||||  ||| ||  ||| |||  ||||||| |||||||| ||||||    
T  12310 acatgattctatttgggttgtggtcgacaggttgacgaagtcgacgcacttcattggtatcaacatcaattatccggtagctcagttggctgagatt 12406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 179
Target Start/End: Complemental strand, 27409 - 27249
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| ||| |||||||||| ||| ||||| || |||||||||||||| || ||||| |||||||| || ||||||||||| || ||| | |    
T  27409 catcagaagcctgcagggttgttgacactgttagatgtgccagagtggaagtgggatagcatttccatggattttgtgacgagtttaccgaatactccaa 27310  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcc 179  Q
    |||||||||||||||||||||||||| ||||  ||||||||||||| || ||||| |||||    
T  27309 gagggcatgatgccatttgggttgttgtcgataggttgacgaagtcagcgcattttattcc 27249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 58 - 203
Target Start/End: Original strand, 2336 - 2482
Alignment:
Q  58 accggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-gagagggcatgatgccatttgggttgttatcgaccggttg 156  Q
    ||||||||||||||||||| | |||||||||||||| || ||||||||||| ||||||| |||||||||||||||||||||||| ||| ||||  ||||     
T  2336 accggagtggaagtgggacggcatttctatggattttgtgacgagtttacctaacactccgagagggcatgatgccatttgggtggttgtcgataggtta 2435  T
Q  157 acgaagtcggcacatttcattcctattaatgtcagttactcggtagc 203  Q
    |||||||||||||| || ||||| |||||| ||| |||  |||||||    
T  2436 acgaagtcggcacactttattccaattaatatcaattatccggtagc 2482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 754 - 554
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactc-ga 118  Q
    ||||||||||||| ||| |||||||||||||| ||| | ||  |||||||||||||||  ||||| |||||||| || ||||||||||| || |||| ||    
T  754 catcagaagcctgcagggttgttgacaccgttagatttgccaaagtggaagtgggacaacatttccatggattttgtgacgagtttaccgaatactctga 655  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagat 218  Q
    ||||||||||||||||||||| | || ||||  |||||||||||||| |||| || ||||| || ||| | ||||   ||||||| |||||||| |||||    
T  654 gagggcatgatgccatttgggattttgtcgataggttgacgaagtcgacacactttattccgatcaatattagttttccggtagctcagttggcggagat 555  T
Q  219 t 219  Q
    |    
T  554 t 554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 19 - 194
Target Start/End: Original strand, 654 - 830
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||| ||||| ||| ||||||||||||||||| ||||| |||||||| ||||| |  |||||||||||||| || || |||||||| || ||| ||    
T  654 acatcagaggcctgcaggtttgttgacaccgttggaagtaccagagtggaaatgggataacatttctatggattttgtgacaagtttacctaatactccg 753  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagtta 194  Q
    |||||||||||| | || ||||||||  | ||| |||||||||||||||| || |||||||| |||||| |||||||    
T  754 agagggcatgattcgatatgggttgtggtagacaggttgacgaagtcggcgcacttcattccgattaatatcagtta 830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 179
Target Start/End: Complemental strand, 10678 - 10518
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||| ||| |||||||||||||| ||| | || |||||||||||||| || ||||  |||||||| || ||||||||||| || | | |||    
T  10678 catcagaagcctgcagggttgttgacaccgttagatatgccagagtggaagtgggatagcattttcatggattttgtgacgagtttaccgaatagtccga 10579  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcc 179  Q
    |||||||||||| ||||||||||||| ||||  ||||||||||||||||||| || |||||    
T  10578 gagggcatgatgtcatttgggttgttgtcgataggttgacgaagtcggcacactttattcc 10518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 211
Target Start/End: Complemental strand, 48009 - 47817
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||  ||| |||||||| ||||| ||||| || ||||||||||||||||  ||||| |||||||| || ||||||||||| || ||| |||    
T  48009 catcagaagcctacagggttgttgaccccgttagatgtgccagagtggaagtgggacaacatttccatggattttgtgacgagtttaccgaatactccga 47910  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttgg 211  Q
    |||| | ||||||||||||||||||| ||||  ||||||| ||||||||||| || ||||| || ||| | |||||  ||||||| |||||||    
T  47909 gaggccctgatgccatttgggttgttgtcgataggttgactaagtcggcacactttattccgatcaatattagttatccggtagctcagttgg 47817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 24 - 179
Target Start/End: Complemental strand, 28938 - 28782
Alignment:
Q  24 agaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacactcga-gagg 122  Q
    ||||||||| ||| ||||| |||| ||| ||||| || ||||||||||||||||  ||||| |||||||| || ||||||||||| || |||| | ||||    
T  28938 agaagcctgcagggttgttaacactgttagatgtgccagagtggaagtgggacaacatttccatggattttgtgacgagtttaccgaatactccaagagg 28839  T
Q  123 gcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcc 179  Q
    |||||||||||||||||||||| || |  |||||||||||||||||||||| |||||    
T  28838 gcatgatgccatttgggttgttgtctataggttgacgaagtcggcacattttattcc 28782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 66; Significance: 2e-29; HSPs: 2)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 19 - 219
Target Start/End: Complemental strand, 19735 - 19534
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| ||||||||||| || ||||| || || |||||||||||||  |||||||||||||| || ||||||||||| || ||| ||    
T  19735 acatcagaagcctgcagggttgttgacacctttagatgtgccagaatggaagtgggacaacatttctatggattttgtgacgagtttacccaatactccg 19636  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    |||||||||||||| |||||||||||  | ||  ||||||||||||| || || || ||||| || ||| | ||||   ||||||| |||||||| ||||    
T  19635 agagggcatgatgctatttgggttgtggtggataggttgacgaagtcagcgcactttattccgatcaatataagttttccggtagctcagttggcggaga 19536  T
Q  218 tt 219  Q
    ||    
T  19535 tt 19534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 19 - 219
Target Start/End: Complemental strand, 23897 - 23696
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| ||||||||||| || ||||| || || |||||||||||||  |||||||||||||| || ||||||||||| || ||| ||    
T  23897 acatcagaagcctgcagggttgttgacacctttagatgtgccagaatggaagtgggacaacatttctatggattttgtgacgagtttacccaatactccg 23798  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    |||||||||||||| |||||||||||  | ||  ||||||||||||| || || || ||||| || ||| | ||||   ||||||| |||||||| ||||    
T  23797 agagggcatgatgctatttgggttgtggtggataggttgacgaagtcagcgcactttattccgatcaatataagttttccggtagctcagttggcggaga 23698  T
Q  218 tt 219  Q
    ||    
T  23697 tt 23696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 66; Significance: 2e-29; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 49934 - 50135
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    |||||||||||||| ||| ||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||| || || |||||||  || ||| ||    
T  49934 acatcagaagcctgcagggttgttgacaccattggatgtaccggagtggaaatgggatagtatttctatggattttgtgacaagtttacataatactccg 50033  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    ||||| |||||| | || ||||||||  ||||  | |||||||||||||| || || ||||| || ||| ||||||   |||| || |||||||| ||||    
T  50034 agaggacatgattctatatgggttgtggtcgatagattgacgaagtcggcgcactttattccgataaatatcagttttccggtggctcagttggcggaga 50133  T
Q  218 tt 219  Q
    ||    
T  50134 tt 50135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 106101 - 106160
Alignment:
Q  126 tgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaa 185  Q
    |||| ||||||||||  || | || |||||||||||||| ||||||||||||||||||||    
T  106101 tgattccatttgggtgattgttgatcggttgacgaagtcagcacatttcattcctattaa 106160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 71 - 219
Target Start/End: Complemental strand, 49606 - 49457
Alignment:
Q  71 tgggacagtatttctatggatttcgtaacgagtttaccaaacactc-gagagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcac 169  Q
    ||||| || |||||||||||||| ||  |||||||||||||||||| ||||||||||||| | || ||||||||  |||||  ||||||||||||||| |    
T  49606 tgggatagcatttctatggattttgtggcgagtttaccaaacactccgagagggcatgattctatatgggttgtggtcgacaagttgacgaagtcggcgc 49507  T
Q  170 atttcattcctattaatgtcagttactcggtagcacagttggcagagatt 219  Q
    | |||||||| |||||| |||||||  ||||||| |||||||| ||||||    
T  49506 acttcattccgattaatatcagttaaccggtagctcagttggcggagatt 49457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 13084 - 12996
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttac 107  Q
    |||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||| || |||||||||||||| || ||||||||||    
T  13084 acatcagaagcctgcagggttgttgacaccgttggatgtgccggagtggaagtgggatagcatttctatggattttgtgacgagtttac 12996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 118 - 219
Target Start/End: Complemental strand, 11674 - 11573
Alignment:
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    |||||||||||||| || ||||||||  ||||| |||||||||||||||| || || ||| | |||||| |||||||  ||||||| |||||||| ||||    
T  11674 agagggcatgatgctatatgggttgtggtcgacaggttgacgaagtcggcgcactttatttcgattaatatcagttatccggtagctcagttggcggaga 11575  T
Q  218 tt 219  Q
    ||    
T  11574 tt 11573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 20862 - 20943
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacga 101  Q
    ||||||||||||| ||| |||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| |||||||    
T  20862 catcagaagcctgcagggttgttgacaccgttggatgtgccggagtggaaatgggacagcatttctatggattttgtaacga 20943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2094 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold2094
Description:

Target: scaffold2094; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 482 - 637
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    ||||||||||| || ||| |||||||||||||| |||||||| |||||||||||||| || ||||| |||||||| || || ||||| || || ||| ||    
T  482 acatcagaagcatgcagg-ttgttgacaccgttagatgtacctgagtggaagtgggatagcatttccatggattttgtgacaagtttgccgaatactccg 580  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttc 174  Q
    |||||||||||  ||||| |||||||| ||||  ||||||||||||| || ||||||    
T  581 agagggcatgacaccattagggttgttgtcgataggttgacgaagtcagcgcatttc 637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 7566 - 7654
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttacc 108  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||||||||| ||||| || |||||||||||||| || |||||||||||    
T  7566 catcagaagcctgcagggttgttgacaccgttggatgtactggagtggaaatgggatagcatttctatggattttgtgacgagtttacc 7654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 18233 - 18108
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    ||||||||||||  ||| |||||||| ||||| ||||| || ||||||||||||||||  ||||| |||||||| || ||||||||||| || ||| ||     
T  18233 catcagaagccttcagggttgttgactccgttagatgtgccagagtggaagtgggacatcatttccatggattttgtgacgagtttaccgaatactccgt 18134  T
Q  119 gagggcatgatgccatttgggttgtt 144  Q
    ||| ||||||||||||||||||||||    
T  18133 gagagcatgatgccatttgggttgtt 18108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 165
Target Start/End: Original strand, 24492 - 24638
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    ||||||||||||||  || |||||||||||||| ||||| ||| ||||||| ||||| |||| ||| |||||||| ||||| |||||||| || ||| |     
T  24492 acatcagaagcctgctgggttgttgacaccgttagatgtgccgaagtggaaatgggatagta-ttccatggattttgtaacaagtttaccgaatactcca 24590  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcg 165  Q
    |||||||||||| |||||||||| ||| | ||  | ||||||||||||    
T  24591 agagggcatgataccatttgggtggttgtagatagattgacgaagtcg 24638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 25140 - 25306
Alignment:
Q  20 catcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cga 118  Q
    |||||||| ||||| || |||||||||||||| ||||| ||| ||||||| ||||| ||| | || |||||||| || |||||||| || || ||| | |    
T  25140 catcagaaacctgttgggttgttgacaccgttagatgtgccgtagtggaaatgggatagtgtatccatggattttgtcacgagtttgccgaatactccaa 25239  T
Q  119 gagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaa 185  Q
    |||||||||| || ||||||||  || | ||  | |||||||||||||| ||||||||||| |||||    
T  25240 gagggcatgacgctatttgggtgattgtggatagattgacgaagtcggctcatttcattccaattaa 25306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 219
Target Start/End: Original strand, 10228 - 10429
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaaca-ctcg 117  Q
    ||||||||||||||  || ||||||||||| || ||||| || || ||||| ||||| || || || ||||| || ||||| ||||||||||| | ||||    
T  10228 acatcagaagcctgctgggttgttgacaccattagatgtgccagaatggaaatgggatagcatatccatggactttgtaacaagtttaccaaatacctcg 10327  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagaga 217  Q
    ||||||||||||||||  ||||| ||  | ||  | ||||||||||| ||||| || ||||  |||||| | ||||   |||| ||||| ||||||||||    
T  10328 agagggcatgatgccacatgggtggtggttgatagattgacgaagtcagcacactttattctaattaatattagttttccggtggcacaattggcagaga 10427  T
Q  218 tt 219  Q
    ||    
T  10428 tt 10429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 177
Target Start/End: Complemental strand, 12380 - 12221
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cg 117  Q
    ||||||||| |||| ||| ||| |||||||||| |||||||| |||||||| ||||| || || || |||||||| || |||||||| || || ||| ||    
T  12380 acatcagaaacctgcagggttgatgacaccgttagatgtaccagagtggaaatgggatagcatatccatggattttgtgacgagtttgccgaatacttcg 12281  T
Q  118 agagggcatgatgccatttgggttgttatcgaccggttgacgaagtcggcacatttcatt 177  Q
    | |||| |||| || ||||||||  || | ||  | |||||||||||||| |||||||||    
T  12280 aaagggaatgacgcgatttgggtgattgtagatggattgacgaagtcggctcatttcatt 12221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 38 - 219
Target Start/End: Original strand, 28207 - 28389
Alignment:
Q  38 ttgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cgagagggcatgatgccattt 136  Q
    ||||||||||| || ||||| || |||||||| ||||| || || || |||||||| ||||| |||||||| || ||| | || || |||||| ||||||    
T  28207 ttgttgacaccattagatgtgccagagtggaaatgggatagcatatccatggattttgtaacaagtttaccgaatactccaaggggacatgataccattt 28306  T
Q  137 gggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagatt 219  Q
    |||| ||| | ||  | |||||||||||||| ||||| ||||| |||||| | ||||   |||| || |||||||| ||||||    
T  28307 gggtagttgttgatagattgacgaagtcggcgcattttattccgattaatattagttttccggtggctcagttggcggagatt 28389  T

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Target: scaffold0064; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 38 - 219
Target Start/End: Original strand, 40198 - 40380
Alignment:
Q  38 ttgttgacaccgttggatgtaccggagtggaagtgggacagtatttctatggatttcgtaacgagtttaccaaacact-cgagagggcatgatgccattt 136  Q
    ||||||||||| || ||||| || |||||||| ||||| || || || |||||||| ||||| |||||||| || ||| | || || |||||| ||||||    
T  40198 ttgttgacaccattagatgtgccagagtggaaatgggatagcatatccatggattttgtaacaagtttaccgaatactccaaggggacatgataccattt 40297  T
Q  137 gggttgttatcgaccggttgacgaagtcggcacatttcattcctattaatgtcagttactcggtagcacagttggcagagatt 219  Q
    |||| ||| | ||  | |||||||||||||| ||||| ||||| |||||| | ||||   |||| || |||||||| ||||||    
T  40298 gggtagttgttgatagattgacgaagtcggcgcattttattccgattaatattagttttccggtggctcagttggcggagatt 40380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 34074 - 34018
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtggga 75  Q
    ||||||||| |||| ||| ||||||||||| |||||||||||||||||||| |||||    
T  34074 acatcagaatcctgcagggttgttgacaccattggatgtaccggagtggaaatggga 34018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0600 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 4662 - 4608
Alignment:
Q  19 acatcagaagcctgtaggattgttgacaccgttggatgtaccggagtggaagtgg 73  Q
    |||||||||||||| ||| |||||||||||||| ||||| || ||||||||||||    
T  4662 acatcagaagcctgcagggttgttgacaccgttagatgtgccagagtggaagtgg 4608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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