View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11737A_low_590 (Length: 215)
Name: NF11737A_low_590
Description: NF11737A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11737A_low_590 |
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Alignment Details
Target: chr4 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 30 - 194
Target Start/End: Original strand, 54261180 - 54261344
Alignment:
| Q |
30 |
taatacataagcgcataagttataattgcaaattaagctgtttatccagatagggcgtatatcttgtgttctcagtattcaaagttcaattgtttactaa |
129 |
Q |
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| T |
54261180 |
taatacataagcgcataagttataattgcaaattaagctgtttatccatatagggcgtatatcttgtgttctcagtattcaaagttcaattgtttactaa |
54261279 |
T |
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| Q |
130 |
tttataagagtaaaggaaattagcaaaagtttgaaagatcaaactcttaattacttgtttcgctc |
194 |
Q |
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| T |
54261280 |
tttataagagtaaaggaaattagcaaaagtttgaaggatcaaactcttaattacttgtttcgctc |
54261344 |
T |
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