View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11737A_low_6 (Length: 607)

Name: NF11737A_low_6
Description: NF11737A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11737A_low_6
NF11737A_low_6
[»] chr7 (34 HSPs)
chr7 (13-591)||(4828653-4829231)
chr7 (201-531)||(30405518-30405849)
chr7 (181-470)||(24596843-24597135)
chr7 (299-475)||(17881457-17881635)
chr7 (344-522)||(37144851-37145029)
chr7 (205-439)||(29544533-29544771)
chr7 (370-521)||(9755732-9755883)
chr7 (370-521)||(9800529-9800679)
chr7 (344-521)||(7361638-7361816)
chr7 (207-486)||(7372434-7372710)
chr7 (273-439)||(3268898-3269066)
chr7 (297-439)||(1074466-1074611)
chr7 (410-522)||(8606001-8606112)
chr7 (205-439)||(23124914-23125152)
chr7 (273-439)||(1255145-1255314)
chr7 (349-438)||(22067817-22067906)
chr7 (273-521)||(4977752-4978004)
chr7 (273-437)||(20461580-20461746)
chr7 (169-435)||(18496583-18496852)
chr7 (458-516)||(21543071-21543129)
chr7 (349-435)||(21545810-21545896)
chr7 (296-390)||(8308987-8309083)
chr7 (273-436)||(7142115-7142281)
chr7 (313-428)||(5312758-5312875)
chr7 (205-245)||(20017164-20017204)
chr7 (206-245)||(7815534-7815573)
chr7 (202-345)||(3487228-3487370)
chr7 (207-248)||(21545692-21545733)
chr7 (205-245)||(315384-315424)
chr7 (298-387)||(12358719-12358810)
chr7 (205-245)||(22067666-22067706)
chr7 (344-439)||(315199-315294)
chr7 (273-387)||(9761347-9761464)
chr7 (350-438)||(46054713-46054801)
[»] chr8 (33 HSPs)
chr8 (122-521)||(30543695-30544095)
chr8 (203-522)||(11437350-11437673)
chr8 (349-486)||(24584735-24584872)
chr8 (203-439)||(29291785-29292023)
chr8 (169-411)||(5153800-5154045)
chr8 (225-466)||(13583403-13583637)
chr8 (350-439)||(14977118-14977208)
chr8 (302-430)||(14424774-14424904)
chr8 (201-439)||(32239301-32239543)
chr8 (205-439)||(12956503-12956733)
chr8 (273-383)||(28074583-28074695)
chr8 (296-438)||(35135376-35135522)
chr8 (283-435)||(10867006-10867160)
chr8 (205-439)||(16052140-16052378)
chr8 (201-435)||(22894391-22894627)
chr8 (302-522)||(31436410-31436632)
chr8 (296-430)||(28260245-28260381)
chr8 (304-436)||(6888156-6888287)
chr8 (303-430)||(12774805-12774935)
chr8 (201-439)||(27097661-27097902)
chr8 (202-439)||(28291961-28292200)
chr8 (344-521)||(30851105-30851282)
chr8 (209-439)||(28901217-28901441)
chr8 (181-239)||(12357696-12357754)
chr8 (181-239)||(12358824-12358882)
chr8 (205-245)||(16054505-16054545)
chr8 (355-438)||(5570158-5570241)
chr8 (201-248)||(31436678-31436724)
chr8 (207-245)||(13081800-13081838)
chr8 (351-439)||(24120245-24120334)
chr8 (350-439)||(28902103-28902192)
chr8 (205-245)||(28902300-28902340)
chr8 (202-246)||(30850960-30851004)
[»] chr3 (35 HSPs)
chr3 (223-522)||(28422384-28422685)
chr3 (168-449)||(18474175-18474458)
chr3 (225-471)||(11474828-11475078)
chr3 (273-439)||(26297763-26297929)
chr3 (318-471)||(26387822-26387977)
chr3 (273-521)||(21829065-21829315)
chr3 (273-439)||(8402484-8402651)
chr3 (273-430)||(25919403-25919556)
chr3 (202-437)||(19219071-19219310)
chr3 (168-256)||(19542950-19543038)
chr3 (286-430)||(33577757-33577903)
chr3 (324-430)||(19545967-19546075)
chr3 (325-423)||(30493249-30493349)
chr3 (274-438)||(33914500-33914662)
chr3 (351-439)||(1475293-1475381)
chr3 (297-376)||(26797205-26797285)
chr3 (344-439)||(11521154-11521248)
chr3 (350-436)||(13911282-13911368)
chr3 (201-422)||(23908130-23908354)
chr3 (205-245)||(25883314-25883354)
chr3 (355-430)||(27374468-27374543)
chr3 (295-419)||(5632496-5632614)
chr3 (350-395)||(25188815-25188860)
chr3 (344-436)||(23007071-23007163)
chr3 (273-345)||(26418830-26418902)
chr3 (201-248)||(5632402-5632449)
chr3 (205-252)||(18066001-18066048)
chr3 (207-242)||(19263769-19263804)
chr3 (476-521)||(5632628-5632673)
chr3 (283-469)||(19285084-19285271)
chr3 (205-245)||(1475143-1475183)
chr3 (350-438)||(2729630-2729718)
chr3 (204-248)||(8402413-8402457)
chr3 (205-245)||(11521376-11521416)
chr3 (277-385)||(27415236-27415347)
[»] chr1 (34 HSPs)
chr1 (201-521)||(52271104-52271426)
chr1 (183-506)||(26854161-26854485)
chr1 (201-430)||(26102080-26102312)
chr1 (201-430)||(19257665-19257895)
chr1 (202-436)||(15298731-15298967)
chr1 (201-471)||(25126462-25126735)
chr1 (205-430)||(11769857-11770086)
chr1 (205-439)||(23223425-23223665)
chr1 (210-439)||(25494357-25494580)
chr1 (205-439)||(30675498-30675735)
chr1 (168-482)||(21548619-21548936)
chr1 (205-439)||(26657490-26657727)
chr1 (286-471)||(18795163-18795350)
chr1 (273-429)||(25727841-25728000)
chr1 (273-429)||(25736249-25736408)
chr1 (349-435)||(19884190-19884276)
chr1 (274-423)||(27461114-27461266)
chr1 (202-247)||(23505965-23506010)
chr1 (281-430)||(25730511-25730663)
chr1 (350-439)||(50047195-50047284)
chr1 (287-387)||(31313618-31313720)
chr1 (344-439)||(8247663-8247758)
chr1 (357-439)||(12810336-12810418)
chr1 (349-435)||(18391100-18391186)
chr1 (333-427)||(15416966-15417062)
chr1 (205-245)||(12423778-12423818)
chr1 (205-245)||(30781971-30782011)
chr1 (201-248)||(25665629-25665676)
chr1 (350-428)||(12423926-12424004)
chr1 (348-390)||(23519768-23519810)
chr1 (205-258)||(9252473-9252526)
chr1 (389-469)||(21550930-21551010)
chr1 (205-245)||(23519632-23519672)
chr1 (205-245)||(50047386-50047426)
[»] chr5 (32 HSPs)
chr5 (207-467)||(19331497-19331759)
chr5 (344-522)||(23157794-23157975)
chr5 (287-521)||(20694572-20694808)
chr5 (202-436)||(7742730-7742967)
chr5 (169-436)||(19763713-19763988)
chr5 (273-439)||(26070488-26070656)
chr5 (279-439)||(24841767-24841930)
chr5 (344-436)||(18222510-18222602)
chr5 (334-471)||(20083448-20083586)
chr5 (205-439)||(25594556-25594793)
chr5 (205-387)||(26329933-26330116)
chr5 (205-377)||(11274193-11274369)
chr5 (213-376)||(25367671-25367836)
chr5 (280-439)||(24410869-24411030)
chr5 (344-433)||(25680616-25680705)
chr5 (344-436)||(16634063-16634155)
chr5 (355-439)||(17382052-17382136)
chr5 (205-430)||(17027550-17027778)
chr5 (398-521)||(22643924-22644047)
chr5 (344-439)||(24517368-24517463)
chr5 (206-438)||(16622541-16622767)
chr5 (202-292)||(18872912-18873002)
chr5 (353-427)||(24268581-24268655)
chr5 (353-427)||(24345210-24345284)
chr5 (201-387)||(18178166-18178357)
chr5 (344-438)||(15205658-15205752)
chr5 (452-518)||(25367555-25367621)
chr5 (350-439)||(12340026-12340115)
chr5 (183-248)||(22643746-22643811)
chr5 (344-412)||(11997900-11997968)
chr5 (207-239)||(18452677-18452709)
chr5 (206-242)||(30072330-30072366)
[»] chr2 (30 HSPs)
chr2 (273-521)||(19540969-19541219)
chr2 (370-521)||(29647577-29647728)
chr2 (278-439)||(21849011-21849174)
chr2 (344-521)||(27917989-27918165)
chr2 (273-509)||(24047326-24047564)
chr2 (201-430)||(34063700-34063937)
chr2 (169-435)||(18236130-18236399)
chr2 (318-510)||(22388735-22388924)
chr2 (206-376)||(17415028-17415201)
chr2 (354-465)||(17415211-17415322)
chr2 (344-439)||(21843008-21843103)
chr2 (297-486)||(22510914-22511104)
chr2 (201-378)||(27417122-27417303)
chr2 (355-439)||(21844646-21844730)
chr2 (296-435)||(17240812-17240950)
chr2 (280-435)||(21505078-21505236)
chr2 (344-439)||(35031716-35031811)
chr2 (202-427)||(18818723-18818956)
chr2 (201-345)||(14921898-14922043)
chr2 (354-439)||(17152167-17152252)
chr2 (334-387)||(30705268-30705321)
chr2 (286-426)||(39730474-39730616)
chr2 (201-426)||(24187993-24188224)
chr2 (205-245)||(16593614-16593654)
chr2 (351-471)||(32276526-32276646)
chr2 (201-256)||(22525679-22525734)
chr2 (349-439)||(28278434-28278524)
chr2 (206-436)||(30998788-30999021)
chr2 (350-378)||(15829205-15829233)
chr2 (205-245)||(25474248-25474288)
[»] chr4 (33 HSPs)
chr4 (202-378)||(17187250-17187427)
chr4 (349-486)||(19601765-19601902)
chr4 (201-376)||(31859760-31859938)
chr4 (201-521)||(29437401-29437716)
chr4 (201-430)||(23353646-23353873)
chr4 (273-427)||(10576479-10576635)
chr4 (273-439)||(9288224-9288392)
chr4 (182-471)||(21077215-21077507)
chr4 (302-471)||(21167711-21167883)
chr4 (322-521)||(22119578-22119779)
chr4 (205-439)||(34864159-34864392)
chr4 (344-439)||(1676301-1676396)
chr4 (344-439)||(1682829-1682924)
chr4 (205-387)||(15192269-15192454)
chr4 (286-439)||(17339760-17339914)
chr4 (279-439)||(25315169-25315332)
chr4 (349-439)||(9782994-9783084)
chr4 (297-436)||(26159773-26159914)
chr4 (355-435)||(27302796-27302876)
chr4 (296-435)||(46647214-46647354)
chr4 (344-410)||(10320225-10320291)
chr4 (205-387)||(17026560-17026745)
chr4 (205-245)||(1695710-1695750)
chr4 (344-387)||(1673826-1673869)
chr4 (347-426)||(1695856-1695935)
chr4 (201-256)||(33519230-33519285)
chr4 (367-439)||(12111360-12111433)
chr4 (349-426)||(18444277-18444354)
chr4 (205-246)||(18898192-18898233)
chr4 (202-246)||(19602008-19602052)
chr4 (318-412)||(20044219-20044315)
chr4 (319-376)||(33519107-33519166)
chr4 (205-245)||(51884813-51884853)
[»] scaffold0065 (2 HSPs)
scaffold0065 (399-522)||(12033-12156)
scaffold0065 (166-369)||(12328-12534)
[»] scaffold0337 (2 HSPs)
scaffold0337 (399-515)||(1604-1720)
scaffold0337 (166-256)||(2008-2098)
[»] chr6 (19 HSPs)
chr6 (399-515)||(24507645-24507761)
chr6 (205-430)||(17860312-17860540)
chr6 (201-376)||(26499706-26499884)
chr6 (302-387)||(9943111-9943198)
chr6 (318-439)||(26512755-26512878)
chr6 (318-439)||(26517871-26517994)
chr6 (166-256)||(24507267-24507357)
chr6 (205-245)||(15575135-15575175)
chr6 (297-430)||(16439482-16439616)
chr6 (295-439)||(14768223-14768369)
chr6 (280-439)||(32930412-32930573)
chr6 (273-375)||(9396539-9396642)
chr6 (354-439)||(13759467-13759552)
chr6 (206-316)||(30355456-30355567)
chr6 (273-387)||(12972317-12972433)
chr6 (350-435)||(20495806-20495890)
chr6 (159-255)||(14768093-14768189)
chr6 (205-241)||(15998725-15998761)
chr6 (303-376)||(22559176-22559250)
[»] scaffold0190 (1 HSPs)
scaffold0190 (208-521)||(11564-11880)
[»] scaffold0185 (2 HSPs)
scaffold0185 (282-439)||(1457-1616)
scaffold0185 (202-247)||(2709-2754)
[»] scaffold0043 (2 HSPs)
scaffold0043 (273-510)||(58688-58928)
scaffold0043 (183-248)||(58958-59022)
[»] scaffold0171 (2 HSPs)
scaffold0171 (207-425)||(21425-21647)
scaffold0171 (367-436)||(6213-6282)
[»] scaffold0011 (1 HSPs)
scaffold0011 (202-449)||(228047-228295)
[»] scaffold0188 (1 HSPs)
scaffold0188 (206-390)||(26819-27007)
[»] scaffold1149 (2 HSPs)
scaffold1149 (203-246)||(1997-2040)
scaffold1149 (399-516)||(1723-1839)
[»] scaffold1026 (1 HSPs)
scaffold1026 (355-436)||(1850-1931)
[»] scaffold0386 (1 HSPs)
scaffold0386 (286-383)||(13016-13116)
[»] scaffold0836 (1 HSPs)
scaffold0836 (201-247)||(2817-2863)
[»] scaffold0282 (1 HSPs)
scaffold0282 (205-255)||(22477-22527)
[»] scaffold0362 (1 HSPs)
scaffold0362 (205-245)||(7830-7870)


Alignment Details
Target: chr7 (Bit Score: 543; Significance: 0; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 543; E-Value: 0
Query Start/End: Original strand, 13 - 591
Target Start/End: Complemental strand, 4829231 - 4828653
Alignment:
Q  13 atggacatcaaggccgtgtccatacgtgaggcacatggtttggtgcgtaggggcacgtggggaagtaggcaatattatcccatgtgaagggtgtgtggct 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||    
T  4829231 atggacatcaaggccgtgtccatacgtgaggcacatggtttggtgcgtaggggcacatggggaagtagacaatattatcccatgtgaagggtgggtggct 4829132  T
Q  113 ttatccgcaggggctcatgaggcactcccctcatgtgcgattttagcagcttacgaccctttttcggccattctttcatcttttaatcccttggaacttg 212  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  4829131 ttatccgcagaggctcatgaggcactcccctcatgtgcgatttcagcagcttacgaccctttttcggccgttctttcatcttttaatcccttggaacttg 4829032  T
Q  213 aaatgaattatcttcactttgtattgtcttcaaataacttctaatatcattgaattttcgtcttcttatcctcgatccttcgtgtgatatcttgtttttt 312  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  4829031 aaatgaattatcttcactttgtattgtcttcaaataacttctaagatcattgaattttcgtcttcttatcctcgatccgtcgtgtaatatcttgtttttt 4828932  T
Q  313 cgatctacatgatttctcattaaaaagactcaacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaa 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4828931 cgatctacatgatttctcattaaaaagactcaacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaa 4828832  T
Q  413 agttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaataattacactaaaaataaagctaaaaatatcatatgttatt 512  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4828831 agttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaataattacactaaaaataaagctaaaaatatcatatgttatt 4828732  T
Q  513 ccatcatcaagcaccaacatcaaactttgagttaaaattcaacaattctccacttttattctaaatttaaggtgatgtc 591  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4828731 ccatcatcaagcaccaacatcaaactttgagttaaaattcaacaattctccacttttattctaaatttaaggtgatgtc 4828653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 201 - 531
Target Start/End: Complemental strand, 30405849 - 30405518
Alignment:
Q  201 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaata-tcattgaattttcgtcttcttatcctcgatccttcgtgtga 299  Q
    |||||||| || ||| ||||| | ||||||||||||||| |||||||| ||||||| | |||||||| ||   ||||| |||||||||||||||   |||    
T  30405849 ccttggaatttcaaacgaattgtattcactttgtattgtattcaaataccttctaagaatcattgaacttcaatcttcatatcctcgatccttcacatga 30405750  T
Q  300 tatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgatt 397  Q
    | |||| ||||  |||| |||||||||||||| |||||| ||||||  || ||||||||||||||| ||||||||||| || ||||||||||| || | |    
T  30405749 tttcttattttgccgatttacatgatttctcactaaaaa-actcaaaacacctatggagttgcatggtttaggataaa-gtgaattacaatgagtcaaat 30405652  T
Q  398 aaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaataattacactaaaaataaagctaaaa 497  Q
    ||||| ||||||||||||||||||||||||| | |||||||| ||| |||||  ||||| |||||||||||||| |||||||||| ||| | ||| ||||    
T  30405651 aaaaacaatacaaaaagttcctcaaaccattaacaactcctctaattgacttctaatttaccttcaaatgcaaagaattacactagaaacatagcaaaaa 30405552  T
Q  498 atatcatatgttattccatcatcaagcaccaaca 531  Q
    |||||||||||||||||||||||| | |||||||    
T  30405551 atatcatatgttattccatcatcatgtaccaaca 30405518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 181 - 470
Target Start/End: Original strand, 24596843 - 24597135
Alignment:
Q  181 cattctttcatcttttaatcccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatc-attgaattttcgtcttctt 279  Q
    ||||||||| ||||  ||| ||||||||||| ||||||||| |||||||||||||||||||||||||  ||||||  | | | |||| ||   ||||  |    
T  24596843 cattctttcgtcttgcaatgccttggaacttcaaatgaattttcttcactttgtattgtcttcaaatttcttctatgaaccactgaacttcaatctttat 24596942  T
Q  280 atcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaag 377  Q
    |||||||||| | |  ||||| |||||||||  |||| |||| ||||||||| |||||||||| ||  || ||| ||||||||||||||||||||||||     
T  24596943 atcctcgatcttccacgtgatgtcttgttttgccgatttacacgatttctcactaaaaagacttaaaacacctacggagttgcatgatttaggataaaat 24597042  T
Q  378 taaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaa 470  Q
    | |||||||| || ||   | |||| ||| |||||| | | |||||||||||| ||||| || ||| |||||  |||||||||||||||||||    
T  24597043 tgaattacaacgactcagatcaaaacaatgcaaaaactccatcaaaccattgacaactcttctaattgacttctaattttccttcaaatgcaa 24597135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 299 - 475
Target Start/End: Original strand, 17881457 - 17881635
Alignment:
Q  299 atatcttgttttttcgatctacatgatttctcattaaaaagactcaacaa--ctatggagttgcatgatttaggataaaagtaaattacaatgaatcgat 396  Q
    ||||||||||||| |||| ||||||| |||||| ||||||||||||| |   ||||  |||||||||||||| ||||||| ||||||||||||| ||||     
T  17881457 atatcttgtttttccgatttacatgacttctcactaaaaagactcaaaatacctattaagttgcatgatttatgataaaattaaattacaatgattcgaa 17881556  T
Q  397 taaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaataat 475  Q
    | |||| |||||||||||||||| ||| |||||| |||||||  ||  |||||  ||||| ||||||||||||||||||    
T  17881557 tgaaaataatacaaaaagttcctaaaatcattgacaactcctttaaatgacttctaatttgccttcaaatgcaaataat 17881635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 344 - 522
Target Start/End: Complemental strand, 37145029 - 37144851
Alignment:
Q  344 aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaat 443  Q
    |||| ||| |||||||||||||||||||||||| || ||||||| || | || | |||| |||||||||||||  ||||| || ||| |||||||| |||    
T  37145029 aacacctacggagttgcatgatttaggataaaaatatattacaacgacttgaatgaaaataatacaaaaagtttttcaaaacaatgacaactcctctaat 37144930  T
Q  444 agactttcaattttccttcaaatgcaaataattacactaaaaataaagctaaaaatatcatatgttattccatcatcaa 522  Q
     |||||  ||||| ||||||||| |||| ||||| |||||||| | || |||| | |||||||||||||||||||||||    
T  37144929 tgacttcaaatttgccttcaaatccaaagaattatactaaaaacatagttaaatacatcatatgttattccatcatcaa 37144851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 205 - 439
Target Start/End: Complemental strand, 29544771 - 29544533
Alignment:
Q  205 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaa-tatcattgaattttcgtcttcttatcctcgatccttcgtgtgatatc 303  Q
    ||||||||||||||||| |||||||||||||||||||||||| | |||||||  ||||||||  ||   ||||| |||| | |||||||| |||||| ||    
T  29544771 ggaacttgaaatgaattttcttcactttgtattgtcttcaaaaaccttctaagaatcattgatcttcaatcttcatatctttgatccttcatgtgatgtc 29544672  T
Q  304 ttgttttttcgatctacatgatttctca-ttaaaaagactc--aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaa 400  Q
    ||| ||| ||||| ||||||||| || | | ||||| ||||  ||||  |||||| |||||  |||||||| |||||| |||||||| || |||| | ||    
T  29544671 ttggtttgtcgatttacatgattccttactaaaaaacactcaaaacacttatggaattgcacaatttaggagaaaagtgaattacaacgactcgagtgaa 29544572  T
Q  401 aagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    || ||||||| | ||||||||||| ||||| ||||||||    
T  29544571 aacaatacaatatgttcctcaaactattgacaactcctc 29544533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 370 - 521
Target Start/End: Complemental strand, 9755883 - 9755732
Alignment:
Q  370 gataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgca 469  Q
    |||||||||||||||||| || |||| | |||| ||||||||| ||||||||||| | ||| || ||||| ||| |||||  ||||| ||||||||||||    
T  9755883 gataaaagtaaattacaacgactcgagtgaaaaaaatacaaaacgttcctcaaactagtgacaattcctctaattgacttataatttgccttcaaatgca 9755784  T
Q  470 aataattacactaaaaataaagctaaaaatatcatatgttattccatcatca 521  Q
    |  || || |||||||| | ||||| ||||||||||||||||| ||||||||    
T  9755783 agaaaatatactaaaaacatagctacaaatatcatatgttatttcatcatca 9755732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 370 - 521
Target Start/End: Complemental strand, 9800679 - 9800529
Alignment:
Q  370 gataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgca 469  Q
    |||||||||||||||||| || |||| | |||| ||||||||| ||||||||||| | ||| || ||||| ||| |||||  ||||||||||||||||||    
T  9800679 gataaaagtaaattacaacgactcgagtgaaaaaaatacaaaacgttcctcaaactagtgacaattcctctaattgacttataattttccttcaaatgca 9800580  T
Q  470 aataattacactaaaaataaagctaaaaatatcatatgttattccatcatca 521  Q
    |  || || ||||||||  | |||| ||||||||||||||||||||||||||    
T  9800579 agaaaatatactaaaaa-catgctacaaatatcatatgttattccatcatca 9800529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 344 - 521
Target Start/End: Original strand, 7361638 - 7361816
Alignment:
Q  344 aacaactatggagttgcatgatttag-gataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaa 442  Q
    |||| ||| ||||||||||||||||| ||||||||| | ||||||||| |||| | |||| | |||||||||||| || ||||| ||| |||||||| ||    
T  7361638 aacatctacggagttgcatgatttagtgataaaagtgagttacaatgactcgaatgaaaacattacaaaaagttcatcgaaccaatgacaactcctctaa 7361737  T
Q  443 tagactttcaattttccttcaaatgcaaataattacactaaaaataaagctaaaaatatcatatgttattccatcatca 521  Q
    |||| ||| ||||| |||| ||||||||| |||||||||| ||| | || || ||| |||||||||  || ||||||||    
T  7361738 tagatttttaatttgccttaaaatgcaaagaattacactagaaacatagttagaaagatcatatgtattttcatcatca 7361816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 207 - 486
Target Start/End: Original strand, 7372434 - 7372710
Alignment:
Q  207 aacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatcattgaattttcgtcttcttatcctcgatccttcgtgtgatatcttg 306  Q
    |||||||||| |||| ||||||||| |||||||||| ||| | ||||||| ||||||||| || |  |||  |||||| |||||||| ||  ||||||||    
T  7372434 aacttgaaataaattttcttcactt-gtattgtctttaaaaatcttctaagatcattgaacttccagctttatatccttgatccttcatg--atatcttg 7372530  T
Q  307 ttttttcgatctacatgatttctcattaaaaag-actcaa--caactatggagttgcatgatttag-gataaaagtaaattacaatgaatcgattaaaaa 402  Q
     |||   ||| |||| ||||||||| ||||||  ||| ||  || ||||| ||||||||||||| | ||||||| | |||||||| || |||| | ||||    
T  7372531 atttgctgatttacaagatttctcactaaaaaacactgaaaacacctatgaagttgcatgatttcgtgataaaattgaattacaacgactcgaatgaaaa 7372630  T
Q  403 gaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaataattacactaaaaa 486  Q
     |||||||||||||| |||||||| ||| |||||||| |||    ||  ||||| |||||||||||||| ||||||||||||||    
T  7372631 caatacaaaaagttcatcaaaccaatgacaactcctctaat----ttctaatttaccttcaaatgcaaagaattacactaaaaa 7372710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 273 - 439
Target Start/End: Original strand, 3268898 - 3269066
Alignment:
Q  273 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagact--caacaactatggagttgcatgatttagg 370  Q
    ||||| ||| || |||||||| ||||||||||||||||  |||| |||||||||||||| ||||||||||   ||||  || | ||||||||||||||||    
T  3268898 tcttcatatacttgatccttcatgtgatatcttgttttgccgatttacatgatttctcactaaaaagacttaaaacacatacgaagttgcatgatttagg 3268997  T
Q  371 ataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    |||||||| ||||||||  | || |   |||| ||||||||| ||| ||||||||| ||| ||||||||    
T  3268998 ataaaagtgaattacaacaactcaaacgaaaacaatacaaaatgttactcaaaccaatgacaactcctc 3269066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 297 - 439
Target Start/End: Complemental strand, 1074611 - 1074466
Alignment:
Q  297 tgatatcttgttttttcgatctacatgatttctcattaaaaa-gactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatc 393  Q
    |||| ||||| |||| | || |||||||||||||| |||||| ||| |||  ||  |||||||||| || |||||||||||||| |||||||||||||||    
T  1074611 tgatgtcttgcttttccaatttacatgatttctcactaaaaaagacacaaaacacttatggagttgtataatttaggataaaagcaaattacaatgaatc 1074512  T
Q  394 gattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    || | |||| |||||||   ||||||||||||||||| ||||||||    
T  1074511 gaatgaaaataatacaattggttcctcaaaccattgacaactcctc 1074466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 410 - 522
Target Start/End: Complemental strand, 8606112 - 8606001
Alignment:
Q  410 aaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaataattacactaaaaataaagctaaaaatatcatatgtt 509  Q
    |||||||||||||||||||||||||||||| ||| || ||  |||||||||| ||| ||||||||    |||||||| | |||| |||| ||||||||||    
T  8606112 aaaagttcctcaaaccattgaaaactcctctaattgatttctaattttcctttaaacgcaaataaaataactaaaaacatagct-aaaacatcatatgtt 8606014  T
Q  510 attccatcatcaa 522  Q
    |||||||||||||    
T  8606013 attccatcatcaa 8606001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 205 - 439
Target Start/End: Complemental strand, 23125152 - 23124914
Alignment:
Q  205 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatc-attgaattttcgtcttcttatcctcgatccttcgtgtgatatc 303  Q
    |||| |||||||||||| |||||||||||||||||||| ||  | ||| ||| | | |||||| ||   ||||| |||||||||||||||   |||| ||    
T  23125152 ggaatttgaaatgaattttcttcactttgtattgtctttaagaatcttataagaaccattgaacttcaatcttcatatcctcgatccttcacatgatgtc 23125053  T
Q  304 ttgttttttcgatctacatgatttctcatta-aaaagactc--aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaa 400  Q
    ||| ||  ||||| |||||||||||||| || |||| ||||  |||| |||| |||||| ||||||| ||||||| || |||||||| || |||| | ||    
T  23125052 ttgattggtcgatttacatgatttctcactagaaaacactcaaaacacctatagagttgtatgattttggataaatgtgaattacaacgactcgagtgaa 23124953  T
Q  401 aagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    || ||||||| | |||||||| |||| | | ||||||||    
T  23124952 aacaatacaatatgttcctcagaccactaacaactcctc 23124914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 273 - 439
Target Start/End: Original strand, 1255145 - 1255314
Alignment:
Q  273 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcatta-aaaagactcaa--caactatggagttgcatgatttag 369  Q
    ||||| |||||| |||||||| |||||| | ||| ||| | ||| || || |||| |||||| |||| ||||||  || ||||| |||||||||||||||    
T  1255145 tcttcgtatccttgatccttcatgtgatgttttgatttgttgatttaaataatttttcattacaaaacactcaaaacacctatgaagttgcatgatttag 1255244  T
Q  370 gataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    ||||||| | ||||||||||| |||| | |||| |||||||    |||||||||||||||| ||||||||    
T  1255245 gataaaaatgaattacaatgactcgagtgaaaacaatacaatttattcctcaaaccattgacaactcctc 1255314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 349 - 438
Target Start/End: Original strand, 22067817 - 22067906
Alignment:
Q  349 ctatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcct 438  Q
    ||||||||||||||||| |||||||||| | ||||||||||| |||| | |||| ||||||  | ||||||||||||||||| |||||||    
T  22067817 ctatggagttgcatgatctaggataaaattgaattacaatgactcgagtgaaaacaatacattatgttcctcaaaccattgacaactcct 22067906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 273 - 521
Target Start/End: Original strand, 4977752 - 4978004
Alignment:
Q  273 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaaga---ctcaacaactatggagttgcatgatttag 369  Q
    ||||| ||||||||||||||| |||||| ||||| ||| |  || |||||||||||||| || |||     | ||||  ||||| |||||||| ||||||    
T  4977752 tcttcatatcctcgatccttcatgtgatgtcttgatttgtatatttacatgatttctcactataaaccgctcacaacctctatgaagttgcataatttag 4977851  T
Q  370 gataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgca 469  Q
    ||||||||| |||||||| || | || | | || |||||||||| ||| |||||||| ||| |||||||  ||| |||||  ||||| |||| |||||||    
T  4977852 gataaaagtgaattacaacgacttgaatgataaaaatacaaaaaattcttcaaaccaatgacaactcctttaattgacttataatttacctttaaatgca 4977951  T
Q  470 --aataattacactaaaaataaagctaaaaatatcatatgttattccatcatca 521  Q
      || || || ||| |||| | ||||||||||||||| || |||||| ||||||    
T  4977952 agaaaaaatatact-aaaacatagctaaaaatatcatgtggtattccgtcatca 4978004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 273 - 437
Target Start/End: Original strand, 20461580 - 20461746
Alignment:
Q  273 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactc--aacaactatggagttgcatgatttagg 370  Q
    ||||| |||||| ||||||||   |||| |||| ||||  |||| |||||||||||||| |||||||||||  |||| ||||   ||||| |||||||||    
T  20461580 tcttcatatccttgatccttcacttgatgtcttattttgccgatttacatgatttctcactaaaaagactcgaaacacctatcatgttgcgtgatttagg 20461679  T
Q  371 ataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcc 437  Q
    || ||| | | |||||| || |||| | |||| ||||||||  ||||||||||||||||| ||||||    
T  20461680 atgaaattgagttacaacgactcgaatgaaaacaatacaaattgttcctcaaaccattgacaactcc 20461746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 169 - 435
Target Start/End: Complemental strand, 18496852 - 18496583
Alignment:
Q  169 ccctttttcggccattctttcatcttttaatcccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatcattgaatt 268  Q
    |||||||||| || ||||| | ||||  ||| ||||||||||||||||||||| ||||||  ||||||| |||||||  |  |||||| | |  | | |     
T  18496852 ccctttttcgaccgttcttacgtcttgaaatgccttggaacttgaaatgaattttcttcatcttgtattttcttcaacaacattctaagaaccattattc 18496753  T
Q  269 ttcg-tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgat 365  Q
    |||  ||||| |||||| ||||||||    ||| ||  |||||| |||| |||||||| |||||  ||| || |||||  || ||||| ||| |||||||    
T  18496752 ttcaatcttcatatccttgatccttcactcgatgtcccgtttttccgatttacatgatatctcaccaaataggctcaaaacacctatgaagtcgcatgat 18496653  T
Q  366 ttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaact 435  Q
    ||||||||||| | ||||||||||| |||| | |||| ||| |||| |||||||||||| ||||| ||||    
T  18496652 ttaggataaaaatgaattacaatgattcgaatgaaaacaattcaaatagttcctcaaacaattgacaact 18496583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 458 - 516
Target Start/End: Original strand, 21543071 - 21543129
Alignment:
Q  458 ccttcaaatgcaaataattacactaaaaataaagctaaaaatatcatatgttattccat 516  Q
    |||||||||| |||||||||||||||||| | ||||||||| |||||||||||||||||    
T  21543071 ccttcaaatgaaaataattacactaaaaacatagctaaaaacatcatatgttattccat 21543129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 349 - 435
Target Start/End: Original strand, 21545810 - 21545896
Alignment:
Q  349 ctatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaact 435  Q
    ||||| |||||||||||||||||||||||| | |||||| || |||| | |||| ||||||| | ||||||||||||||||| ||||    
T  21545810 ctatgtagttgcatgatttaggataaaagtgagttacaacgactcgagtgaaaacaatacaatatgttcctcaaaccattgacaact 21545896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 296 - 390
Target Start/End: Original strand, 8308987 - 8309083
Alignment:
Q  296 gtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatga 390  Q
    ||||| |||||||||   ||| |||||||||||| | |||||||||||||  ||  ||||||||||||||||||||||||||| ||||| |||||||    
T  8308987 gtgatgtcttgttttgctgatttacatgatttcttactaaaaagactcaaaacatgtatggagttgcatgatttaggataaaactaaatcacaatga 8309083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 273 - 436
Target Start/End: Complemental strand, 7142281 - 7142115
Alignment:
Q  273 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcatta-aaaagact--caacaactatggagttgcatgatttag 369  Q
    ||||| |||| | ||||||||  ||||| ||||| ||| ||||| |||||||||||||| || |||| |||   |||| ||||||||||||||||| | |    
T  7142281 tcttcatatctttgatccttcacgtgatgtcttgatttgtcgatttacatgatttctcactacaaaacacttaaaacacctatggagttgcatgatcttg 7142182  T
Q  370 gataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactc 436  Q
    ||||||||| |||||||| || |||| | |||  |||| || | |||||| |||||||||| |||||    
T  7142181 gataaaagtgaattacaacgactcgagtgaaagcaataaaatatgttccttaaaccattgacaactc 7142115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 313 - 428
Target Start/End: Original strand, 5312758 - 5312875
Alignment:
Q  313 cgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaa 410  Q
    |||| |||||||||| ||| |||||||||||||  || ||||||||||||||| | || ||||||||| |||||||| || || | | |||| |||||||    
T  5312758 cgatttacatgatttatcactaaaaagactcaaaacacctatggagttgcatgctataagataaaagtgaattacaacgactcaaatgaaaacaatacaa 5312857  T
Q  411 aaagttcctcaaaccatt 428  Q
    | ||||||| | ||||||    
T  5312858 atagttccttagaccatt 5312875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 20017204 - 20017164
Alignment:
Q  205 ggaacttgaaatgaattatcttcactttgtattgtcttcaa 245  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  20017204 ggaacttgaaatgaattttcttcactttgtattgtcttcaa 20017164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 206 - 245
Target Start/End: Complemental strand, 7815573 - 7815534
Alignment:
Q  206 gaacttgaaatgaattatcttcactttgtattgtcttcaa 245  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  7815573 gaacttgaaatgaattttcttcactttgtattgtcttcaa 7815534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 202 - 345
Target Start/End: Original strand, 3487228 - 3487370
Alignment:
Q  202 cttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaata-tcattgaattttcg-tcttcttatcctcgatccttcgtgtga 299  Q
    |||||||||| |||||||||  ||||||||||||||||||| ||||  ||||| | | || |||| | |||| ||||  |||| | |||||||| | |||    
T  3487228 cttggaacttcaaatgaatt--cttcactttgtattgtcttaaaatgtcttctgagagtcgttga-tgttcgatctttatatcattgatccttcatttga 3487324  T
Q  300 tatcttgttttttcgatctacatgatttctcattaaaaagactcaa 345  Q
    | |||||||||  ||||  |||||||||||||||||||||||||||    
T  3487325 tgtcttgttttgccgattcacatgatttctcattaaaaagactcaa 3487370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 207 - 248
Target Start/End: Original strand, 21545692 - 21545733
Alignment:
Q  207 aacttgaaatgaattatcttcactttgtattgtcttcaaata 248  Q
    ||||||||||||||| |||||||||| |||||||||||||||    
T  21545692 aacttgaaatgaattttcttcactttttattgtcttcaaata 21545733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 315424 - 315384
Alignment:
Q  205 ggaacttgaaatgaattatcttcactttgtattgtcttcaa 245  Q
    ||||||||||||||||| | |||||||||||||||||||||    
T  315424 ggaacttgaaatgaattttattcactttgtattgtcttcaa 315384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 12358719 - 12358810
Alignment:
Q  298 gatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaa 387  Q
    ||||| ||| |||| |||| || || |||||||| |||||||||||||  || ||||| ||||| |||||||||||||||| | ||||||||    
T  12358719 gatattttgcttttccgatttatattatttctcactaaaaagactcaaaacacctatgaagttgaatgatttaggataaaaatgaattacaa 12358810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 205 - 245
Target Start/End: Original strand, 22067666 - 22067706
Alignment:
Q  205 ggaacttgaaatgaattatcttcactttgtattgtcttcaa 245  Q
    ||||||||||||||||| | |||||||||||||||||||||    
T  22067666 ggaacttgaaatgaattcttttcactttgtattgtcttcaa 22067706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 439
Target Start/End: Complemental strand, 315294 - 315199
Alignment:
Q  344 aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    |||| ||||||||||||||||| |||||||||| | ||| ||||| | |||| | | || ||||||| |  ||| |||||||||||| ||||||||    
T  315294 aacacctatggagttgcatgatctaggataaaactgaataacaataactcgagtgacaataatacaatatattcttcaaaccattgacaactcctc 315199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 387
Target Start/End: Original strand, 9761347 - 9761464
Alignment:
Q  273 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctca---ttaaaaagactcaacaactatggagttgcatgatttag 369  Q
    ||||| |||||| ||||||||  ||||| ||||| ||| ||||| |||||||||| |||   |||||||  |  |||| ||||||| |||||| || |||    
T  9761347 tcttcatatccttgatccttcacgtgatgtcttgatttgtcgatttacatgatttatcactattaaaaactcaaaacacctatggaattgcataatctag 9761446  T
Q  370 gataaaagtaaattacaa 387  Q
    ||||||||| ||||||||    
T  9761447 gataaaagtgaattacaa 9761464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 350 - 438
Target Start/End: Complemental strand, 46054801 - 46054713
Alignment:
Q  350 tatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcct 438  Q
    |||| ||||||||||||||  ||||||||||||||||| || | || | |||| |||| |||  |||||||||| || ||| |||||||    
T  46054801 tatgaagttgcatgatttattataaaagtaaattacaacgacttgaattaaaacaatataaattgttcctcaaatcaatgacaactcct 46054713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 106; Significance: 1e-52; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 122 - 521
Target Start/End: Complemental strand, 30544095 - 30543695
Alignment:
Q  122 ggggctcatgaggcactcccctcatgtgcgattttagcagcttacgaccctttttcggccattctttcatcttttaatcccttggaacttgaaatgaatt 221  Q
    ||||| |||||||||  |||||||||  |||||| ||||| || ||||||||||||   ||||||| |  |||  ||| |||||||||||||||||||||    
T  30544095 ggggcacatgaggcaa-cccctcatgcacgatttcagcagttttcgaccctttttcactcattcttccgccttgcaatgccttggaacttgaaatgaatt 30543997  T
Q  222 atcttcactttgtattgtcttcaaataacttctaat--atcattgaattttcgtcttcttatcctcgatccttcgtgtgatatcttgttttttcgatcta 319  Q
     |||||||||| ||||||||| ||||| ||| |||   | ||||||| ||   ||||| ||||||| ||||||| ||||||||||||||||  |||| ||    
T  30543996 ttcttcactttatattgtctttaaatatcttttaaagaaccattgaacttcaatcttcatatcctcaatccttcatgtgatatcttgttttaccgattta 30543897  T
Q  320 catgatttctcattaaaaagactc--aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttc 417  Q
    ||||||||||||  ||||||||||  |||| ||||  | |||||||||||||||||||||| ||||||||  | || | | |||| ||||| ||||||||    
T  30543896 catgatttctcaccaaaaagactcaaaacacctatataattgcatgatttaggataaaagtgaattacaacaactcaaatgaaaacaatac-aaaagttc 30543798  T
Q  418 ctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaataattacactaaaaataaagctaaaaatatcatatgttattccatc 517  Q
     ||||| |||||| |||||||| |||  ||||| |||||  ||||||||||||| ||  | |||||||| | |||||||||||||||| ||| |||||||    
T  30543797 atcaaa-cattgagaactcctctaattaacttttaatttgtcttcaaatgcaaaaaaaaatactaaaaacatagctaaaaatatcataagtttttccatc 30543699  T
Q  518 atca 521  Q
    ||||    
T  30543698 atca 30543695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 203 - 522
Target Start/End: Complemental strand, 11437673 - 11437350
Alignment:
Q  203 ttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatc-attgaattttcgtcttcttatcctcgatcctt-cgtgtgat 300  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||  ||||||| | | |||||| ||   | ||| |||||| ||||||| |   ||||    
T  11437673 ttggaacttcaaatgaattatcttcactctgtattgtcttcaaatgtcttctaagaaccattgaacttcaattttcatatccttgatcctttcacttgat 11437574  T
Q  301 atcttgttttttcgatctacatgatttctcattaaaaagactcaaca-ac-tatggagttgcatgatttaggataaaagtaaattacaatgaatcgatta 398  Q
     |||||||||  |||| |||||||||||||| ||||||||||||| | || |||||||||||||||  || ||| ||| | ||||| || || |||| |     
T  11437573 gtcttgttttgccgatttacatgatttctcactaaaaagactcaaaatacatatggagttgcatgacctatgatgaaactgaattataacgactcgaatg 11437474  T
Q  399 aaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaataattacactaaaaataaagctaaaaa 498  Q
    |||| || ||||||| ||| || |||||||||||||||||| ||| ||||| |||||| |||| |||| |||| ||    |||||||  | || ||||||    
T  11437473 aaaacaacacaaaaatttcttcgaaccattgaaaactcctctaattgacttccaatttgcctttaaatacaaagaaaataactaaaagcataggtaaaaa 11437374  T
Q  499 tatcatatgttattccatcatcaa 522  Q
     |||| ||||||||||| ||||||    
T  11437373 catcaaatgttattccaacatcaa 11437350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 349 - 486
Target Start/End: Original strand, 24584735 - 24584872
Alignment:
Q  349 ctatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagact 448  Q
    |||| ||||||||||||||| ||||||| | ||||||||||| |||| | |||| |||||||||| |||||||||||  ||| |||||||| ||| ||||    
T  24584735 ctatagagttgcatgatttatgataaaaatgaattacaatgactcgaatgaaaacaatacaaaaaattcctcaaaccgatgacaactcctctaattgact 24584834  T
Q  449 ttcaattttccttcaaatgcaaataattacactaaaaa 486  Q
    |  ||||| ||||||||| |||| ||||| ||||||||    
T  24584835 tctaatttgccttcaaatacaaagaattatactaaaaa 24584872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 203 - 439
Target Start/End: Complemental strand, 29292023 - 29291785
Alignment:
Q  203 ttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatc-attgaattttcgtcttcttatcctcgatccttcgtgtgata 301  Q
    |||||| |||||||||||| | |||||||| | ||||||||||| | ||||||| | | |||||  ||   | ||| |||||||||| ||||  ||||||    
T  29292023 ttggaatttgaaatgaatttttttcactttctgttgtcttcaaagaccttctaagaaccattgatcttcaatattcatatcctcgattcttcacgtgata 29291924  T
Q  302 tcttgttttttcgatctacatgatttctcattaaaaagactcaaca-ac-tatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaa 399  Q
    |||||||||  |||| |||||||||||| | ||||||||||||| | || |||  |||||||||||||||||||||| |  ||||||| || || | | |    
T  29291923 tcttgttttgccgatttacatgatttcttactaaaaagactcaaaatacttataaagttgcatgatttaggataaaactgcattacaacgactcaaatga 29291824  T
Q  400 aaagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    ||| |||| ||||| |||||||||||||||| ||||||||    
T  29291823 aaa-aatataaaaaattcctcaaaccattgataactcctc 29291785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 169 - 411
Target Start/End: Complemental strand, 5154045 - 5153800
Alignment:
Q  169 ccctttttcggccattctttcatcttttaatcccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaata-tcattgaat 267  Q
    ||||||||||  ||||||| | ||||  |||  |||||||||||||||||||| | ||||  || ||||||||||||| | |||| |||| |||||||      
T  5154045 ccctttttcgagcattcttccgtcttgcaatgtcttggaacttgaaatgaattttattcatgttatattgtcttcaaaaaccttccaataatcattgatc 5153946  T
Q  268 tttcgtcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgat 365  Q
    ||   ||||| |||||||||||||||   | || |||||||||  | || |||||||||||| | |||||||||||||  || |||| |||||| |||||    
T  5153945 ttcaatcttcatatcctcgatccttcactttatgtcttgttttgcctatttacatgatttcttactaaaaagactcaaaacacctatcgagttgaatgat 5153846  T
Q  366 ttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaa 411  Q
    ||| ||||||| | ||||||||||| |||| | |||| ||||||||    
T  5153845 ttaagataaaactgaattacaatgactcgaatgaaaataatacaaa 5153800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 225 - 466
Target Start/End: Original strand, 13583403 - 13583637
Alignment:
Q  225 ttcactttgtattgtcttcaaataacttctaatatc-attgaattttcgtcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatg 323  Q
    |||||||||||||||||||||||| ||||||| | | |||||| ||   || || |||||||||||||||   |||| ||||||||| ||||| ||||||    
T  13583403 ttcactttgtattgtcttcaaatatcttctaagaaccattgaacttcaatcatcatatcctcgatccttcacttgatgtcttgttttgtcgatttacatg 13583502  T
Q  324 atttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctca 421  Q
    |||||||| |||||||||||||  |||||          |||||||||||||||| | |||||||| || |||| |||||| |||| |||| ||||||||    
T  13583503 atttctcactaaaaagactcaaaccaact----------atgatttaggataaaactgaattacaaagactcgaataaaaacaatagaaaaggttcctca 13583592  T
Q  422 aaccattgaaaactcctcaaatagactttcaattttccttcaaat 466  Q
     || ||| | |||||||| ||| |||||  ||||| |||| ||||    
T  13583593 gactattaacaactcctctaattgacttctaatttaccttaaaat 13583637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 14977118 - 14977208
Alignment:
Q  350 tatggagttgcatgatttaggataaaagtaaattacaatgaatcga-ttaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||| | ||||| ||||||| | ||||||||||||||||| ||||||||    
T  14977118 tatggagttgcatgatttaggataaaagtgaattacaatgactcgagtgaaaaacaatacaatatgttcctcaaaccattgacaactcctc 14977208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 302 - 430
Target Start/End: Original strand, 14424774 - 14424904
Alignment:
Q  302 tcttgttttttcgatctacatgatttctcattaaaaagac--tcaacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaa 399  Q
    |||||||||  |||| |||||||||||||| |||||| ||    |||| |||||||||||||||||||||||||||| | |||||||| || |||| | |    
T  14424774 tcttgttttgccgatttacatgatttctcactaaaaaaacctaaaacacctatggagttgcatgatttaggataaaactgaattacaacgactcgaatga 14424873  T
Q  400 aaagaatacaaaaagttcctcaaaccattga 430  Q
    |||  ||| ||||||||||||||||||||||    
T  14424874 aaaccatataaaaagttcctcaaaccattga 14424904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 201 - 439
Target Start/End: Complemental strand, 32239543 - 32239301
Alignment:
Q  201 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatc-attgaattttcgtcttcttatcctcgatccttcgtgtga 299  Q
    ||||| ||||||||||||||| |||||||||| ||||||||| ||  | ||| ||| | | |||||| ||   ||||| ||||||  ||||||| |||||    
T  32239543 ccttgaaacttgaaatgaattttcttcactttttattgtctttaagaaccttataaaaaccattgaacttcaatcttcatatcctttatccttcatgtga 32239444  T
Q  300 tatcttgttttttcgatctacatgatttctcatta-aaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgat 396  Q
    | ||| | ||| || || |||| ||||||||| || |||| ||||||  ||  ||||||||||||||||||| ||||||||| |||| ||| || || |     
T  32239443 tgtctcgatttgtcaatttacacgatttctcactacaaaacactcaaaacatttatggagttgcatgatttaagataaaagtgaattgcaacgactcaag 32239344  T
Q  397 taaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    |||||| ||||||| | ||| ||||||||||||| ||||||||    
T  32239343 taaaaacaatacaatatgttactcaaaccattgacaactcctc 32239301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 205 - 439
Target Start/End: Complemental strand, 12956733 - 12956503
Alignment:
Q  205 ggaacttgaaatgaatta-tcttcactttgtattgtcttcaaataacttctaatatcattgaattttc-gtcttcttatcctcgatccttcgtgtgatat 302  Q
    |||||||||||||||||  ||||||||||||||| |||| ||| | |||| || | || |  || ||| |||||| |||||| ||| |||| ||||||||    
T  12956733 ggaacttgaaatgaatttctcttcactttgtattatcttaaaaaaccttccaaaaacaattgatcttcagtcttcatatccttgattcttcatgtgatat 12956634  T
Q  303 cttgttttttcgatctacatgatttctcattaaaaagactcaacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaa 402  Q
    |||| ||| ||||| || ||||||  ||| || |||      ||| |||| ||||| ||||||||||||||||||| |||||| |||| |||| | ||||    
T  12956633 cttggtttatcgatttatatgattcttcactacaaa------acacctatagagttacatgatttaggataaaagtgaattacgatgactcgagtgaaaa 12956540  T
Q  403 gaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
     ||||||| |  |||||||||||||||| ||||||||    
T  12956539 caatacaatattttcctcaaaccattgacaactcctc 12956503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 273 - 383
Target Start/End: Complemental strand, 28074695 - 28074583
Alignment:
Q  273 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactc--aacaactatggagttgcatgatttagg 370  Q
    ||||| |||||| |||||||| | |||| |||||||||    || |||||||||||||| |||||||||||  |||| ||||||||||||||||||||||    
T  28074695 tcttcatatccttgatccttcatttgatgtcttgttttgcatatttacatgatttctcactaaaaagactcgaaacacctatggagttgcatgatttagg 28074596  T
Q  371 ataaaagtaaatt 383  Q
    |||||||| ||||    
T  28074595 ataaaagtgaatt 28074583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 296 - 438
Target Start/End: Original strand, 35135376 - 35135522
Alignment:
Q  296 gtgatatcttgttttttcgatctacatgatttctc--attaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaa 391  Q
    ||||| ||||||||| ||||| ||| |||||||||  |  ||||||||||||  ||  | ||||||||||||||||||||||||| | |||||||||||     
T  35135376 gtgatgtcttgttttgtcgatttacctgatttctccaaaaaaaaagactcaaaacacatgtggagttgcatgatttaggataaaaatgaattacaatgac 35135475  T
Q  392 tcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcct 438  Q
    |||| |||||| ||||||||| || ||| ||||| |||| |||||||    
T  35135476 tcgagtaaaaacaatacaaaatgtacctaaaacctttgacaactcct 35135522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 10867160 - 10867006
Alignment:
Q  283 ctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaa 380  Q
    |||||||||||  ||| |||||||||||  |||  |||||||||||||| |||||||| ||||  || || ||||||||||||||||  ||||||| | |    
T  10867160 ctcgatccttcacgtggtatcttgttttgccgacttacatgatttctcactaaaaagattcaaagcacctttggagttgcatgatttgagataaaactga 10867061  T
Q  381 attacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaact 435  Q
    ||||||| || || | | |||| |||||||||  |||||||||||||||| ||||    
T  10867060 attacaacgactcaaatgaaaacaatacaaaatattcctcaaaccattgacaact 10867006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 205 - 439
Target Start/End: Original strand, 16052140 - 16052378
Alignment:
Q  205 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaa-tatcattgaattttcgtcttcttatcctcgatccttcgtgtgatatc 303  Q
    ||||||||||||||||| |||||| ||||||||||||||||| | |||||||  |||||||   |||  ||||| ||||||  ||||||| |||||| ||    
T  16052140 ggaacttgaaatgaattttcttcattttgtattgtcttcaaaaaccttctaagaatcattggtctttaatcttcatatcctttatccttcatgtgatgtc 16052239  T
Q  304 ttgttttttcgatctacatgatttctcatta-aaaagactc--aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaa 400  Q
    ||| ||| | ||| || ||||||||||| || |||| ||||  |||| |||| ||||||||||||||| | |||| || ||||| || || |||| | ||    
T  16052240 ttgatttgttgatttagatgatttctcactacaaaacactcaaaacacctattgagttgcatgatttaaggtaaatgtgaattataacgactcgagtgaa 16052339  T
Q  401 aagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    || | || || | |||  |||||||||||| ||||||||    
T  16052340 aacattaaaatatgttattcaaaccattgacaactcctc 16052378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 201 - 435
Target Start/End: Original strand, 22894391 - 22894627
Alignment:
Q  201 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatca-ttgaattttcgtcttcttatcctcgatccttcgtgtga 299  Q
    ||||||||||| ||| ||||| |||||||||||||||||||||||| | | ||||| | || |||||||    ||||  |||| | |||||||| |||||    
T  22894391 ccttggaacttcaaaagaattttcttcactttgtattgtcttcaaaaaccatctaagaacaattgaattcaa-tctttatatcattgatccttcatgtga 22894489  T
Q  300 tatcttgttttttcgatctacatgatttctcattaaa-aagactcaacaa--ctatggagttgcatgatttaggataaaagtaaattacaatgaatcgat 396  Q
    ||||||| |||| |||| |||||||||||||| || | || ||| || |   ||||||||||| ||||| || ||||||||| ||| ||||||| ||||     
T  22894490 tatcttgatttt-cgatttacatgatttctcactatagaacactaaaaatacctatggagttgaatgatctaagataaaagtgaatcacaatgattcgag 22894588  T
Q  397 taaaaagaatacaaaaagttcctcaaaccattgaaaact 435  Q
    |  ||||||||||| | || |||||||||||||| ||||    
T  22894589 tgtaaagaatacaatatgtacctcaaaccattgacaact 22894627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 302 - 522
Target Start/End: Complemental strand, 31436632 - 31436410
Alignment:
Q  302 tcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaa 399  Q
    ||||||||| | ||| |||||||||||||| |||||||| ||||  || ||||| |||||||||||||||||||||| ||||||||| ||| |||| | |    
T  31436632 tcttgttttgttgatttacatgatttctcactaaaaagattcaaaacacctatgtagttgcatgatttaggataaaactaaattacactgactcgaatga 31436533  T
Q  400 aaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaataattacactaaaaataaagctaaaaat 499  Q
    ||| |||| |     ||||||||| |||||| |||||||| ||   || |   |||| |||||||||||| ||||    |||||||||| ||   |||||    
T  31436532 aaaaaatatagtttattcctcaaatcattgacaactcctctaaattacatcttatttgccttcaaatgcagataaaataactaaaaatatagtataaaat 31436433  T
Q  500 atcatatgttattccatcatcaa 522  Q
    |||||||| || |||||||||||    
T  31436432 atcatatgatactccatcatcaa 31436410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 296 - 430
Target Start/End: Original strand, 28260245 - 28260381
Alignment:
Q  296 gtgatatcttgttttttcgatctacatgatttctcattaaaaagactc--aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatc 393  Q
    ||||| |||||||||   ||| |||||||||||||| |||||||||||  |||| |||||||||  ||||||||||||||||  |||||||||| || |     
T  28260245 gtgatgtcttgttttgctgatttacatgatttctcactaaaaagactcaaaacacctatggagtctcatgatttaggataaacctaaattacaacgacta 28260344  T
Q  394 gattaaaaagaatacaaaaagttcctcaaaccattga 430  Q
     | | |||| ||||||||| ||||| | |||||||||    
T  28260345 aaatgaaaataatacaaaatgttccaccaaccattga 28260381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 304 - 436
Target Start/End: Original strand, 6888156 - 6888287
Alignment:
Q  304 ttgttttttcgatctacatgatttctcattaaaaagactcaacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaag 403  Q
    ||||||| | ||| |||||||||||||| ||||| ||||||| |    |||||||||||||||||||||| || | ||||||||||| || | | ||||     
T  6888156 ttgttttgttgatttacatgatttctcactaaaatgactcaaaacacctggagttgcatgatttaggatagaactgaattacaatgactcaaatgaaaa- 6888254  T
Q  404 aatacaaaaagttcctcaaaccattgaaaactc 436  Q
    ||||||||| ||| ||| ||||||||| |||||    
T  6888255 aatacaaaatgtttctctaaccattgacaactc 6888287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 303 - 430
Target Start/End: Original strand, 12774805 - 12774935
Alignment:
Q  303 cttgttttttcgatctacatgatttctcattaaaaag-actcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaa 399  Q
    ||||||||| |||| ||||| |||||| | ||||||| ||| ||  || ||||||  |||||||||||||||||||| ||||||||||||| || | |||    
T  12774805 cttgtttttccgatttacattatttcttactaaaaagtactaaaaacacctatggtattgcatgatttaggataaaactaaattacaatgactcaaataa 12774904  T
Q  400 aaagaatacaaaaagttcctcaaaccattga 430  Q
    ||| |||| |||| || | ||||||||||||    
T  12774905 aaataatataaaatgtacgtcaaaccattga 12774935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 201 - 439
Target Start/End: Original strand, 27097661 - 27097902
Alignment:
Q  201 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatc-attgaattttcgtcttcttatcctcgatccttcgtgtga 299  Q
    |||||||||||||| |||||| ||||||  |||||||||||||||| | ||||||| | | ||| |  ||   ||||| |||  || |||| ||  ||||    
T  27097661 ccttggaacttgaattgaattttcttcaacttgtattgtcttcaaagaccttctaagaactattca--ttcaatcttcatatgatcaatccatcacgtga 27097758  T
Q  300 tatcttgttttttcgatctacatgatttctcattaaaaa--gactc--aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcga 395  Q
    | |||||||||  |||| |||||||||||||| ||||||  ||||   |||| ||||| |||||||||||||| ||||||| | |||||||| || || |    
T  27097759 tgtcttgttttgccgatttacatgatttctcactaaaaaaagactttaaacacctatgaagttgcatgatttatgataaaactgaattacaacgactcaa 27097858  T
Q  396 ttaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
     | |||| ||| ||| | ||||||||||||||||| || |||||    
T  27097859 atgaaaacaatgcaacatgttcctcaaaccattgacaattcctc 27097902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 202 - 439
Target Start/End: Original strand, 28291961 - 28292200
Alignment:
Q  202 cttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatcattgaattttc-gtcttcttatcctcgatccttcgtgtgat 300  Q
    |||||||||||||||  ||| |||||| ||||||||||||||||| | ||||||| | |  | ||| |||  ||||| ||||||| ||||||| ||||||    
T  28291961 cttggaacttgaaatttattttcttcattttgtattgtcttcaaagaccttctaagaaccattaatcttcaatcttcatatcctcaatccttcatgtgat 28292060  T
Q  301 atcttgttttttcgatctacatgatttctcattaaaaagactc--aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgatta 398  Q
     |||| ||||  |||| ||||||| |||||| |||||| || |  ||||  | || |||||||| | ||||||||||| | ||||| ||  | || | |     
T  28292061 gtcttattttggcgatttacatga-ttctcactaaaaaaacacaaaacacttgtgaagttgcataaattaggataaaactgaattataacaactcaaatg 28292159  T
Q  399 aaaagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    ||||||| | |||| ||||||||||||| ||| ||||||||    
T  28292160 aaaagaacataaaatgttcctcaaaccactgacaactcctc 28292200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 344 - 521
Target Start/End: Original strand, 30851105 - 30851282
Alignment:
Q  344 aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaat 443  Q
    |||| |||| ||||||||||||||||||||||  | |||||||| || |||| | |||| |||| ||||| |||||||||||||  | ||||| |  ||     
T  30851105 aacacctattgagttgcatgatttaggataaatctgaattacaacgattcgaatgaaaataatataaaaacttcctcaaaccatcaacaactcttataaa 30851204  T
Q  444 agactttcaattttccttcaaatgcaaataattacactaaaaataaagctaaaaatatcatatgttattccatcatca 521  Q
     |||||  |||||||||||||||  ||| ||    |||||||| | ||| ||||||||||||||   |||||||||||    
T  30851205 tgacttctaattttccttcaaatataaagaaaataactaaaaacatagccaaaaatatcatatgacgttccatcatca 30851282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 439
Target Start/End: Original strand, 28901217 - 28901441
Alignment:
Q  209 cttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatc-attgaattttcgtcttcttatcctcgatccttcgtgtgatatcttgt 307  Q
    ||||||||||||| |||||||||||||||||||||| | | ||| ||| | | ||||||||    ||||| |||| | ||| |||| | |||| |||||     
T  28901217 cttgaaatgaattttcttcactttgtattgtcttcagaaaccttataagaaccattgaattcaa-tcttcatatcattgattcttcatatgatgtcttga 28901315  T
Q  308 tttttcgatctacatgatttctcattaaaaagactcaacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaata 407  Q
    ||| ||||| ||||| |||| ||| || |||      ||| ||| |||||||||| || ||||||||||   |||||||| || |||| | |||| ||||    
T  28901316 tttgtcgatgtacattatttatcactacaaa------acatctaaggagttgcattatctaggataaaaacgaattacaacgactcgagtgaaaacaata 28901409  T
Q  408 caaaaagttcctcaaaccattgaaaactcctc 439  Q
    ||| | ||||||||||||||||| ||||||||    
T  28901410 caatatgttcctcaaaccattgacaactcctc 28901441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 12357754 - 12357696
Alignment:
Q  181 cattctttcatcttttaatcccttggaacttgaaatgaattatcttcactttgtattgt 239  Q
    ||||||||| |||| |||| |||||||| |||||||||||| |||||||||| ||||||    
T  12357754 cattctttcctcttataatgccttggaatttgaaatgaattttcttcactttttattgt 12357696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 12358882 - 12358824
Alignment:
Q  181 cattctttcatcttttaatcccttggaacttgaaatgaattatcttcactttgtattgt 239  Q
    ||||||||| |||| |||| |||||||| |||||||||||| |||||||||| ||||||    
T  12358882 cattctttcctcttataatgccttggaatttgaaatgaattttcttcactttttattgt 12358824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 16054545 - 16054505
Alignment:
Q  205 ggaacttgaaatgaattatcttcactttgtattgtcttcaa 245  Q
    ||||||||||||||||| ||||||||||||||| |||||||    
T  16054545 ggaacttgaaatgaattttcttcactttgtattttcttcaa 16054505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 438
Target Start/End: Original strand, 5570158 - 5570241
Alignment:
Q  355 agttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcct 438  Q
    ||||||||||| |||||||||||| ||||||||  | |||| | |||| ||||||| | ||||||||||  ||||| |||||||    
T  5570158 agttgcatgatataggataaaagtgaattacaacaactcgagtgaaaacaatacaatatgttcctcaaagtattgacaactcct 5570241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 248
Target Start/End: Complemental strand, 31436724 - 31436678
Alignment:
Q  201 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaata 248  Q
    |||||||||||||||| |||| | ||||||||||||||||||||||||    
T  31436724 ccttggaacttgaaat-aatttttttcactttgtattgtcttcaaata 31436678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 207 - 245
Target Start/End: Original strand, 13081800 - 13081838
Alignment:
Q  207 aacttgaaatgaattatcttcactttgtattgtcttcaa 245  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  13081800 aacttgaaatgaattttcttcattttgtattgtcttcaa 13081838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 439
Target Start/End: Complemental strand, 24120334 - 24120245
Alignment:
Q  351 atggagttgcatgatttaggataaaagtaaattacaatgaa-tcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    |||||||||||| ||||||||||||||| || ||||| ||| | | | ||||| ||||||| |  ||||||||||| |||| ||||||||    
T  24120334 atggagttgcattatttaggataaaagttaactacaacgaattgggtgaaaaaaaatacaatatattcctcaaaccgttgacaactcctc 24120245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 439
Target Start/End: Complemental strand, 28902192 - 28902103
Alignment:
Q  350 tatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    |||||| |||| || | |||||||||||| |||||||| || |||| | |||| ||||||| | ||| ||||||||||| | ||||||||    
T  28902192 tatggatttgcgtggtataggataaaagtgaattacaacgactcgaatgaaaacaatacaatatgtttctcaaaccattaataactcctc 28902103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 28902340 - 28902300
Alignment:
Q  205 ggaacttgaaatgaattatcttcactttgtattgtcttcaa 245  Q
    ||||||| ||||||||| | |||||||||||||||||||||    
T  28902340 ggaacttaaaatgaattttattcactttgtattgtcttcaa 28902300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 202 - 246
Target Start/End: Original strand, 30850960 - 30851004
Alignment:
Q  202 cttggaacttgaaatgaattatcttcactttgtattgtcttcaaa 246  Q
    ||||||||||||||| |||| ||||||||||||||| | ||||||    
T  30850960 cttggaacttgaaattaattttcttcactttgtattatattcaaa 30851004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 104; Significance: 1e-51; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 223 - 522
Target Start/End: Complemental strand, 28422685 - 28422384
Alignment:
Q  223 tcttcactttgtattgtcttcaaataacttctaatatcattgaattttcgtcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacat 322  Q
    |||||||||||||||||||||||||| ||||||| ||||||||| ||   ||||| ||||||| |||||||  ||||| | ||| ||| |||||||||||    
T  28422685 tcttcactttgtattgtcttcaaataccttctaacatcattgaacttcaatcttcatatcctcaatccttcacgtgatgtattgatttgtcgatctacat 28422586  T
Q  323 gatttctcatta-aaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcct 419  Q
    ||||||||| || |||| | ||||  || | || |||||||||||||||| |||||||| ||||||||||| |||| | |||| |||||||||| |||||    
T  28422585 gatttctcactacaaaacattcaaaacaccaattgagttgcatgatttag-ataaaagtgaattacaatgattcgaatgaaaacaatacaaaaaattcct 28422487  T
Q  420 caaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaataattacactaaaaataaagctaaaaatatcatatgttattccatcat 519  Q
    ||||| |  || |||||||| ||| |||||  |||||||||||||||||||| |||||||||||||  | ||  ||||| || ||||||||||| |||||    
T  28422486 caaacaaacgacaactcctctaattgacttctaattttccttcaaatgcaaagaattacactaaaagcatagtaaaaaacataatatgttattctatcat 28422387  T
Q  520 caa 522  Q
    |||    
T  28422386 caa 28422384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 168 - 449
Target Start/End: Complemental strand, 18474458 - 18474175
Alignment:
Q  168 accctttttcggccattctttcatcttttaatcccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaa-tatcattgaa 266  Q
    |||||||||||  | ||||||| ||||  ||| | ||||||||||||||||||| |||||||||||||||||||||||||| ||||||| || |||||||    
T  18474458 accctttttcgctcgttctttcgtcttgcaatgcattggaacttgaaatgaattttcttcactttgtattgtcttcaaataccttctaagtaccattgaa 18474359  T
Q  267 ttttcgtcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatga 364  Q
     ||   ||||   ||| |||||||||| ||| || |||||| ||  |||| |||||||||||||| | |||||||||||  || ||||||||||||||||    
T  18474358 attcaatctttacatcttcgatccttcatgtaatgtcttgtgttcccgatttacatgatttctcactgaaaagactcaaaacacctatggagttgcatga 18474259  T
Q  365 tttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactt 449  Q
    |||||||||| ||| |||||||||||||||| |  ||| |||||||  |||||||||||| ||||| || ||||| ||| |||||    
T  18474258 tttaggataacagtgaattacaatgaatcgaat-gaaacaatacaatcagttcctcaaacgattgataaatcctctaattgactt 18474175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 225 - 471
Target Start/End: Complemental strand, 11475078 - 11474828
Alignment:
Q  225 ttcactttgtattgtcttcaaataacttctaatatc-attgaattttcgtcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatg 323  Q
    |||||||||||||||||||||||| ||||||| | | ||| |  ||   || || |||| |||||||||| |||||| |||||||||  |||| ||||||    
T  11475078 ttcactttgtattgtcttcaaatatcttctaagaaccatttatcttgaatcctcatatcttcgatccttcatgtgatgtcttgttttgccgatttacatg 11474979  T
Q  324 atttctcattaaaaa-gactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctc 420  Q
    |||||||| |||||| |||||||  ||  |||| |||||||||||||||||||||| | |||||||| || |||| | |||| |||||||||||||||||    
T  11474978 atttctcactaaaaaagactcaaaacacatatgaagttgcatgatttaggataaaattgaattacaacgagtcgaatgaaaataatacaaaaagttcctc 11474879  T
Q  421 aaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaa 471  Q
    ||||||||||  | ||||  ||  ||||| ||||||||||| || ||||||    
T  11474878 aaaccattgactagtcctttaaacgacttccaattttcctttaagtgcaaa 11474828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 273 - 439
Target Start/End: Complemental strand, 26297929 - 26297763
Alignment:
Q  273 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaacaactatggagttgcatgatttaggat 372  Q
    ||||| |||||||||||||||   |||| |||||||||  |||| |||||||||| ||| |||| ||||||||||  |||| ||||||||||||||||||    
T  26297929 tcttcatatcctcgatccttcacttgatgtcttgttttgccgatttacatgatttatcactaaatagactcaacacatatgaagttgcatgatttaggat 26297830  T
Q  373 aaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    |||| | |||||||| || |||| | |||| |||| |||||||| ||||||||||| | ||||||||    
T  26297829 aaaattgaattacaacgactcgaatgaaaacaatataaaaagtttctcaaaccattaacaactcctc 26297763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 318 - 471
Target Start/End: Original strand, 26387822 - 26387977
Alignment:
Q  318 tacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagt 415  Q
    ||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||| | |||||| | ||  | | | |||||||||||||| ||    
T  26387822 tacatgatttctcattaaaaagactcaaaacatctatggagttgcatgatttaggataaaacttaattactacgacacaaatgaaaagaatacaaaacgt 26387921  T
Q  416 tcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaa 471  Q
    | ||||||||||||| |||| ||| |||  ||||  ||||| ||||||||||||||    
T  26387922 ttctcaaaccattgacaactactctaatttacttctaatttgccttcaaatgcaaa 26387977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 273 - 521
Target Start/End: Original strand, 21829065 - 21829315
Alignment:
Q  273 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaacaact---atggagttgcatgatttag 369  Q
    ||||| |||||| ||| |||| |||||| ||||||||   |||| |||| ||||||||| ||| ||||| ||| ||||   ||| ||||| |||||||||    
T  21829065 tcttcatatccttgatacttcatgtgatgtcttgtttcgacgatttacaagatttctcactaacaagacccaa-aactcatatgaagttgtatgatttag 21829163  T
Q  370 gataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgca 469  Q
    ||||||| | |||||||| || || | | |||| ||||||||| ||||||||||||||||| |||||||| ||  ||| |   |||||||||||||||||    
T  21829164 gataaaactgaattacaacgactcaaatgaaaataatacaaaatgttcctcaaaccattgacaactcctctaaatgacctcttattttccttcaaatgca 21829263  T
Q  470 aataattacactaaaaataaagctaaaaatatcatatgttattccatcatca 521  Q
    |||||    | |||||||| ||  |||||||||||||| ||| |||||||||    
T  21829264 aataaaataaataaaaatatagtcaaaaatatcatatgatatcccatcatca 21829315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 273 - 439
Target Start/End: Original strand, 8402484 - 8402651
Alignment:
Q  273 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttagg 370  Q
    ||||| |||||||||||||||   |||| ||||| | | ||||| |||| |||| |||  ||||| |||||||  || |||||||||||||||||||| |    
T  8402484 tcttcatatcctcgatccttcacttgatgtcttgatctatcgatttacacgattcctcgctaaaa-gactcaaaacacctatggagttgcatgatttaag 8402582  T
Q  371 ataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    |||||| | |||||||| || |||| | |||| ||||||||  ||||||||||||||||| ||||||||    
T  8402583 ataaaaatgaattacaacgactcgaatgaaaacaatacaaattgttcctcaaaccattgacaactcctc 8402651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 273 - 430
Target Start/End: Original strand, 25919403 - 25919556
Alignment:
Q  273 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaacaactatggagttgcatgatttaggat 372  Q
    ||||| |||||| |||||||| |||||||||||| ||| ||||| ||||||||| |||| || |||      ||| ||||||||||||||||||||||||    
T  25919403 tcttcatatccttgatccttcatgtgatatcttggtttgtcgatttacatgattcctcactacaaa------acatctatggagttgcatgatttaggat 25919496  T
Q  373 aaaagtaaattacaatgaatcgattaaaaagaataca--aaaagttcctcaaaccattga 430  Q
    |||||| |||||| |||| || | |||||| || |||  | | |||||||||||||||||    
T  25919497 aaaagtgaattacgatgactcaagtaaaaacaacacaatatatgttcctcaaaccattga 25919556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 202 - 437
Target Start/End: Original strand, 19219071 - 19219310
Alignment:
Q  202 cttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaa-tatcattgaattttcgtcttcttatcctcgatccttcgtgtgat 300  Q
    ||||||| |||||||||||| | |||||||||||||||||||||| | |||||||  | ||||||  ||   ||||| |||||| |||||||| ||||||    
T  19219071 cttggaatttgaaatgaattttattcactttgtattgtcttcaaaaaccttctaagaaccattgatcttcaatcttcatatccttgatccttcatgtgat 19219170  T
Q  301 atcttgttttttcgatctacatgatttctcatta-aaaagactc--aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgatt 397  Q
     ||||| |||   ||| ||||||||| |||| || |||| ||||  ||||  ||||| |||||||||||| |||||||||| |||||||| || || | |    
T  19219171 gtcttggtttgaagatttacatgattcctcactacaaaacactcaaaacatttatggtgttgcatgattttggataaaagtgaattacaacgactctagt 19219270  T
Q  398 aaaaagaatacaaaaagttcctcaaaccattgaaaactcc 437  Q
     |||  |||| || | | ||||||||||||||| ||||||    
T  19219271 gaaagtaataaaatatgctcctcaaaccattgacaactcc 19219310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 168 - 256
Target Start/End: Original strand, 19542950 - 19543038
Alignment:
Q  168 accctttttcggccattctttcatcttttaatcccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaa 256  Q
    |||||||||||  |  |||||| ||||  ||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  19542950 accctttttcgctctatctttcgtcttgcaatgccttggaacttgaaatgaattttcttcactttgtattgtcttcaaataccttctaa 19543038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 286 - 430
Target Start/End: Complemental strand, 33577903 - 33577757
Alignment:
Q  286 gatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaatt 383  Q
    |||||||| |||||| ||||  |||  |||| |||||| ||| || ||||||||||||||  || | |||  |||||||||||||||||| || | ||||    
T  33577903 gatccttcatgtgatgtcttactttgccgatttacatgttttttctttaaaaagactcaaaccaccaatgaggttgcatgatttaggatataaatgaatt 33577804  T
Q  384 acaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattga 430  Q
    |||||||||| | |||||| ||||||||| |||| ||||||||||||    
T  33577803 acaatgaatcaaataaaaacaatacaaaacgttcttcaaaccattga 33577757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 324 - 430
Target Start/End: Original strand, 19545967 - 19546075
Alignment:
Q  324 atttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctca 421  Q
    ||||||||||||||| ||||||  |||||||  | || |||||| |||||||| ||| ||||||||||| || | |||||| ||||||| ||||||||||    
T  19545967 atttctcattaaaaaaactcaaaacaactataaaattacatgatataggataatagtgaattacaatgactcaaataaaaacaatacaataagttcctca 19546066  T
Q  422 aaccattga 430  Q
    |||||||||    
T  19546067 aaccattga 19546075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 325 - 423
Target Start/End: Original strand, 30493249 - 30493349
Alignment:
Q  325 tttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaa 422  Q
    ||||||| |||||||||||||  || | ||||| |||||||||||||||||||| |||| ||||| || |||| | |||| ||||||||||||| |||||    
T  30493249 tttctcactaaaaagactcaaaacacccatggatttgcatgatttaggataaaactaaactacaacgactcgaatgaaaacaatacaaaaagtttctcaa 30493348  T
Q  423 a 423  Q
    |    
T  30493349 a 30493349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 274 - 438
Target Start/End: Original strand, 33914500 - 33914662
Alignment:
Q  274 cttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcatta-aaaagactcaacaactatggagttgcatgatttaggat 372  Q
    |||| |||||| ||||||||  ||||| ||||| ||  ||||| |||||||||||||| || |||| |||||| ||| || |||||||||||||| ||||    
T  33914500 cttcatatccttgatccttcacgtgatgtcttgattcgtcgatttacatgatttctcactacaaaacactcaa-aac-atagagttgcatgatttgggat 33914597  T
Q  373 aaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcct 438  Q
    ||  || |||||||| || |||| |||||| ||||||| | |||||||||||| |||| |||||||    
T  33914598 aac-gtgaattacaacgactcgagtaaaaacaatacaatatgttcctcaaaccgttgacaactcct 33914662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 351 - 439
Target Start/End: Original strand, 1475293 - 1475381
Alignment:
Q  351 atggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    ||||||||||||||| ||||||| || | |||||||| || |||| | |||| ||||||| |  |||||||||||||||||||||||||    
T  1475293 atggagttgcatgatctaggatataattgaattacaacgactcgagtgaaaataatacaatatattcctcaaaccattgaaaactcctc 1475381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 297 - 376
Target Start/End: Original strand, 26797205 - 26797285
Alignment:
Q  297 tgatatcttgttttttcgatctacatgatttctcattaaaaagactc-aacaactatggagttgcatgatttaggataaaa 376  Q
    |||| ||||||||| ||||| |||||||| ||||  ||||||||||| |||| ||||| ||||||||||||||||||||||    
T  26797205 tgatgtcttgttttgtcgatttacatgatatctctctaaaaagactcaaacacctatgaagttgcatgatttaggataaaa 26797285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 344 - 439
Target Start/End: Complemental strand, 11521248 - 11521154
Alignment:
Q  344 aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    |||||||||||| ||||||||| |||||||||| | |||||||   |||| | |||||| ||||||| | ||||||||||||||||| ||||||||    
T  11521248 aacaactatggacttgcatgatctaggataaaactgaattacaca-aatcaagtaaaaataatacaatatgttcctcaaaccattgacaactcctc 11521154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 350 - 436
Target Start/End: Complemental strand, 13911368 - 13911282
Alignment:
Q  350 tatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactc 436  Q
    |||| ||||||||||| |||||||||||| ||||||||||| || | | |||| ||||| | | ||||||||||||||||| |||||    
T  13911368 tatgaagttgcatgatctaggataaaagtgaattacaatgattcaagtgaaaacaataccatatgttcctcaaaccattgacaactc 13911282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 201 - 422
Target Start/End: Original strand, 23908130 - 23908354
Alignment:
Q  201 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatc-attgaattttcgtcttcttatcctcgatccttcgtgtga 299  Q
    |||||||| ||| |||||||| ||  || ||||||||||||||||| |  |||||| | | |||||  ||   ||||| ||| || |||||||| || ||    
T  23908130 ccttggaatttggaatgaattttccccaatttgtattgtcttcaaaaactttctaaaaaccattgatcttaaatcttcatattcttgatccttcatgaga 23908229  T
Q  300 tatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgatt 397  Q
    | ||||| |||  || | |||||||||||||  || ||||||||||  || ||||| | |||||| |||| |||||||||  |||||||| ||||||| |    
T  23908230 tgtcttgctttgccgctttacatgatttctccctagaaagactcaaagcacctatgaaattgcattattttggataaaagggaattacaacgaatcgaat 23908329  T
Q  398 aaaaagaatacaaaaagttcctcaa 422  Q
     |||| ||||||||| |||||||||    
T  23908330 gaaaacaatacaaaatgttcctcaa 23908354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 25883354 - 25883314
Alignment:
Q  205 ggaacttgaaatgaattatcttcactttgtattgtcttcaa 245  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  25883354 ggaacttgaaatgaattttcttcactttgtattgtcttcaa 25883314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 355 - 430
Target Start/End: Original strand, 27374468 - 27374543
Alignment:
Q  355 agttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattga 430  Q
    |||||||||||||||||||||| |  |||| ||||| |||| | |||| |||||||||| ||||| ||||||||||    
T  27374468 agttgcatgatttaggataaaactggattataatgactcgaatgaaaacaatacaaaaacttccttaaaccattga 27374543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 295 - 419
Target Start/End: Original strand, 5632496 - 5632614
Alignment:
Q  295 tgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcg 394  Q
    |||||| ||||| ||| ||||| |||||||||||||| || |||      ||| |||||||||||||||||| | ||||||||| |||||||| |||||     
T  5632496 tgtgatgtcttggtttgtcgatttacatgatttctcactacaaa------acacctatggagttgcatgattcaagataaaagtgaattacaacgaatca 5632589  T
Q  395 attaaaaagaatacaaaaagttcct 419  Q
    | | |||| || ||||||| |||||    
T  5632590 aatgaaaacaacacaaaaacttcct 5632614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 350 - 395
Target Start/End: Complemental strand, 25188860 - 25188815
Alignment:
Q  350 tatggagttgcatgatttaggataaaagtaaattacaatgaatcga 395  Q
    ||||||||||||||||||| ||||||||| ||||||||||| ||||    
T  25188860 tatggagttgcatgatttatgataaaagtgaattacaatgattcga 25188815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 436
Target Start/End: Original strand, 23007071 - 23007163
Alignment:
Q  344 aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactc 436  Q
    |||| ||||||||||| |||||||||||||||||| | ||| ||||| ||||   |||| ||||||| |  ||||||||| |||||| |||||    
T  23007071 aacatctatggagttgtatgatttaggataaaagtgatttataatgactcgagggaaaacaatacaatatattcctcaaatcattgacaactc 23007163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 273 - 345
Target Start/End: Complemental strand, 26418902 - 26418830
Alignment:
Q  273 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa 345  Q
    ||||| |||||| |||||||| || ||| |||| ||||| |||| |||||||||||||| |||||||| ||||    
T  26418902 tcttcatatccttgatccttcatgcgatgtcttatttttccgatttacatgatttctcactaaaaagattcaa 26418830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 248
Target Start/End: Original strand, 5632402 - 5632449
Alignment:
Q  201 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaata 248  Q
    ||||||||||||||||||||| |||||| ||| |||| ||||||||||    
T  5632402 ccttggaacttgaaatgaattttcttcaatttttattatcttcaaata 5632449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 252
Target Start/End: Complemental strand, 18066048 - 18066001
Alignment:
Q  205 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataactt 252  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||    
T  18066048 ggaagttgaaatgaattttcttcactttgtattttcttcaaaaaactt 18066001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 207 - 242
Target Start/End: Original strand, 19263769 - 19263804
Alignment:
Q  207 aacttgaaatgaattatcttcactttgtattgtctt 242  Q
    ||||||||||||||| ||||||||||||||||||||    
T  19263769 aacttgaaatgaattttcttcactttgtattgtctt 19263804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 476 - 521
Target Start/End: Original strand, 5632628 - 5632673
Alignment:
Q  476 tacactaaaaataaagctaaaaatatcatatgttattccatcatca 521  Q
    ||||||||||| |||| |||||| ||||||||||||| ||||||||    
T  5632628 tacactaaaaacaaagttaaaaacatcatatgttatttcatcatca 5632673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 469
Target Start/End: Complemental strand, 19285271 - 19285084
Alignment:
Q  283 ctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactc--aacaactatggagttgcatgatttaggataaaagtaa 380  Q
    ||||||||| | | |||||||||||||||  ||| |||| ||| |||||  ||| ||||||  |||| ||| ||||||||  ||||||||| |||| | |    
T  19285271 ctcgatcctacatttgatatcttgtttttctgatttacacgatatctcacgaaagagactcgaaacacctaaggagttgctggatttaggacaaaattga 19285172  T
Q  381 attacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgca 469  Q
    ||||||| || |||| | |||| ||||| |||| || |||| || ||||| |||||||| ||  |||||  ||||| || |||||||||    
T  19285171 attacaacgactcgaatgaaaataatac-aaaattttctcatactattgacaactcctctaaatgacttctaatttaccctcaaatgca 19285084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 205 - 245
Target Start/End: Original strand, 1475143 - 1475183
Alignment:
Q  205 ggaacttgaaatgaattatcttcactttgtattgtcttcaa 245  Q
    |||||||||||| |||| ||||||||||||||| |||||||    
T  1475143 ggaacttgaaataaattttcttcactttgtattatcttcaa 1475183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 350 - 438
Target Start/End: Original strand, 2729630 - 2729718
Alignment:
Q  350 tatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcct 438  Q
    |||| ||||||||| |||||||||||| | |||||||| || |||| | |||| |||| || | ||||||  ||||||||| |||||||    
T  2729630 tatgaagttgcatggtttaggataaaaatgaattacaaggactcgagtgaaaacaatataatatgttccttgaaccattgacaactcct 2729718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 204 - 248
Target Start/End: Original strand, 8402413 - 8402457
Alignment:
Q  204 tggaacttgaaatgaattatcttcactttgtattgtcttcaaata 248  Q
    |||||||||||||||||  |||||||||| |||| ||||||||||    
T  8402413 tggaacttgaaatgaatgttcttcactttatattttcttcaaata 8402457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 11521416 - 11521376
Alignment:
Q  205 ggaacttgaaatgaattatcttcactttgtattgtcttcaa 245  Q
    ||||||||||||||||| ||||| ||||||||| |||||||    
T  11521416 ggaacttgaaatgaattttcttcgctttgtattatcttcaa 11521376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 277 - 385
Target Start/End: Complemental strand, 27415347 - 27415236
Alignment:
Q  277 cttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcatta-aaaagactcaa--caactatggagttgcatgatttaggata 373  Q
    |||||||| |||||||  |||||| ||||| ||  || || |||||||||||| | || |||| ||||||  || ||||| |||||||||||||| ||||    
T  27415347 cttatccttgatcctttatgtgatgtcttgattggtctatttacatgatttcttactacaaaacactcaaaacacctatgaagttgcatgatttacgata 27415248  T
Q  374 aaagtaaattac 385  Q
    ||||| ||||||    
T  27415247 aaagtgaattac 27415236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 1e-42; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 201 - 521
Target Start/End: Original strand, 52271104 - 52271426
Alignment:
Q  201 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaa-tatcattgaattttcgtcttcttatcctcgatccttcgtgtga 299  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||| ||||||| || ||||||| ||   ||||| |||||||||||||||  |||     
T  52271104 ccttggaatttgaaatgaattttcttcactttgtattgtcttcaaataccttctaagtaccattgaacttcaatcttcatatcctcgatccttcacgtgg 52271203  T
Q  300 tatcttgttttttcgatctacatgatttctcattaaaaagactc--aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgatt 397  Q
      | |||||||  |||| ||||| |||||||| |||||||||||  |||| |||||||||||||| ||||||||  ||||| ||| |||| || |  | |    
T  52271204 cgttttgttttgccgatttacataatttctcactaaaaagactcaaaacatctatggagttgcataatttaggaataaagtgaatgacaacgacttaaat 52271303  T
Q  398 aaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaataattacactaaaaataaagctaaaa 497  Q
     |||| | |||| ||| |||||||||||| ||| ||||||||  || || |   | ||| |||| ||||||||| |||||||||||||| | || |||||    
T  52271304 gaaaaaagtacacaaatttcctcaaaccaatgacaactcctc-tattgaatcctattttgcctttaaatgcaaagaattacactaaaaacatagttaaaa 52271402  T
Q  498 atatcatatgttattccatcatca 521  Q
    | ||||||||||||||||||||||    
T  52271403 acatcatatgttattccatcatca 52271426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 183 - 506
Target Start/End: Original strand, 26854161 - 26854485
Alignment:
Q  183 ttctttcatcttttaatcccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatc-attgaattttcgtcttcttat 281  Q
    ||||| ||||||  ||| ||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||| | | |||||| ||   ||||| |||    
T  26854161 ttcttccatcttgcaatgccttggaacttcaaatgaattttcttcactttgtattgtcttcaaatatcttctaagaaccattgaacttcaatcttcatat 26854260  T
Q  282 cctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagta 379  Q
    | | ||||||||   | || |||||||||  || | |||||||||||||  |||||||||||||  || ||||| ||||| |||| ||||||||||| |     
T  26854261 cattgatccttcacttaatgtcttgttttgccggtttacatgatttctc--taaaaagactcaaaacatctatgaagttgtatgaattaggataaaattg 26854358  T
Q  380 aattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaataattaca 479  Q
    |||||||| || | || | ||||||||||||||||||||||||| |||| | |||| ||| ||| |||||  | |||   || ||||||||||||    |    
T  26854359 aattacaacgacttgaatgaaaagaatacaaaaagttcctcaaaacattaacaacttctctaattgacttatattttgtttttaaatgcaaataaaataa 26854458  T
Q  480 ctaaaaataaagctaaaaatatcatat 506  Q
    ||||||||| ||||||||| |||||||    
T  26854459 ctaaaaatatagctaaaaacatcatat 26854485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 201 - 430
Target Start/End: Complemental strand, 26102312 - 26102080
Alignment:
Q  201 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaata-tcattgaattttcgtcttcttatcctcgatccttcgtgtga 299  Q
    ||||| ||||||| ||||||| || |||  |||||||||||||||| | ||||||| | |||||||  ||   ||||| |||||| |||| |||  ||||    
T  26102312 ccttgaaacttgagatgaattttcctcaacttgtattgtcttcaaaaaccttctaaaaatcattgatcttcattcttcatatccttgatcattcacgtga 26102213  T
Q  300 tatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgatt 397  Q
    | ||||||||| ||||| | || ||| ||||| |||||||||||||  || | |||||||||||||||||||||||||||| ||||||||  | |||| |    
T  26102212 tgtcttgttttgtcgatttgcacgatatctcactaaaaagactcaaaacacccatggagttgcatgatttaggataaaagtgaattacaacaactcgaat 26102113  T
Q  398 aaaaagaatacaaaaagttcctcaaaccattga 430  Q
     |||| ||||||||| | |||||||||||||||    
T  26102112 gaaaacaatacaaaatggtcctcaaaccattga 26102080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 201 - 430
Target Start/End: Original strand, 19257665 - 19257895
Alignment:
Q  201 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatcattgaattttcgtcttcttatcctcgatccttcgtgtgat 300  Q
    |||||||| ||||||| |||| |||||||||||||||||||||||| | ||||||| | | ||||  ||   ||||| ||||||||||| ||| ||||||    
T  19257665 ccttggaaattgaaataaattttcttcactttgtattgtcttcaaagaccttctaagaac-ttgatgttcaatcttcatatcctcgatctttcatgtgat 19257763  T
Q  301 atcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgatta 398  Q
     ||||||| |  | || |||| ||||||||| |||||| ||||||  || ||| ||| ||||||||||||||||||||   ||||||||||| | || |     
T  19257764 gtcttgttatgccaatttacacgatttctcactaaaaatactcaaaacacctaaggacttgcatgatttaggataaaatcgaattacaatgactagaatg 19257863  T
Q  399 aaaagaatacaaaaagttcctcaaaccattga 430  Q
    |||| |||||| ||||||||||||| ||||||    
T  19257864 aaaacaatacagaaagttcctcaaatcattga 19257895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 202 - 436
Target Start/End: Original strand, 15298731 - 15298967
Alignment:
Q  202 cttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatc-attgaattttcgtcttcttatcctcgatccttcgtgtgat 300  Q
    |||||||||||||||||||| | ||||| |||||||| ||||||||||||| ||| | | |||||  ||   ||||| ||||||||||||||    ||||    
T  15298731 cttggaacttgaaatgaattttattcacattgtattg-cttcaaataacttttaagaaccattgatcttgaatcttcatatcctcgatcctttacatgat 15298829  T
Q  301 atcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgatta 398  Q
     |||||||||  |||| |||||||||| ||| |||| |||| |||  || ||||| ||||||||||||| |||||||| | ||||||||||| || | |     
T  15298830 ttcttgttttgccgatttacatgatttatcactaaatagacacaaaacacctatgaagttgcatgattttggataaaacttaattacaatgattcaaatg 15298929  T
Q  399 aaaagaatacaaaaagttcctcaaaccattgaaaactc 436  Q
    || | |||||||||| |||||||||||||||| |||||    
T  15298930 aatacaatacaaaaacttcctcaaaccattgacaactc 15298967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 201 - 471
Target Start/End: Complemental strand, 25126735 - 25126462
Alignment:
Q  201 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatc-attgaattttcgtcttcttatcctcgatccttcgtgtga 299  Q
    ||||||||||||||||||||| |||||| |||||||||| |||||| |  |||||| | | |||||  | | ||| || ||||||| |||||||  ||||    
T  25126735 ccttggaacttgaaatgaattttcttcattttgtattgtattcaaagattttctaagaactattgatctgtagtcgtcatatcctcaatccttcacgtga 25126636  T
Q  300 tatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgatt 397  Q
    | |||| |||||   || ||||||||||||||||||||||||||||  ||  |||  | |  ||||||||||||||||| | |||||| | || || | |    
T  25126635 tgtcttatttttctaatttacatgatttctcattaaaaagactcaaaacacatatataatcacatgatttaggataaaactgaattaccacgactcaaat 25126536  T
Q  398 aaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaa 471  Q
    ||||| |||||||||| || ||||||||||||| |||||||| ||  |||||  | ||| ||||||||||||||    
T  25126535 aaaaacaatacaaaaaatttctcaaaccattgacaactcctccaaatgacttctattttgccttcaaatgcaaa 25126462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 205 - 430
Target Start/End: Original strand, 11769857 - 11770086
Alignment:
Q  205 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaa-tatcattgaattttcgtcttcttatcctcgatccttcgtgtgatatc 303  Q
    ||||||||||||||||| |||||||||||||||||||||||| | |||||||  | |||||   ||   ||||| |||| | |||| ||| |||||| ||    
T  11769857 ggaacttgaaatgaattttcttcactttgtattgtcttcaaaaaccttctaagaaccattggtcttcaatcttcatatctttgatcattcatgtgatgtc 11769956  T
Q  304 ttgttttttcgatctacatgatttctca-ttaaaaagactca--acaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaa 400  Q
    ||| ||||||||| |||||||||||||| |  |||| |||||  ||| | ||| |||| ||||||||||||||||||| |||||||| ||  ||| | ||    
T  11769957 ttgatttttcgatttacatgatttctcactgcaaaacactcaacacacccatgaagtttcatgatttaggataaaagtgaattacaacgacacgagtgaa 11770056  T
Q  401 aagaatacaaaaagttcctcaaaccattga 430  Q
    || ||||||| | |||||| ||||||||||    
T  11770057 aacaatacaatatgttccttaaaccattga 11770086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 205 - 439
Target Start/End: Complemental strand, 23223665 - 23223425
Alignment:
Q  205 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataac-ttctaata-tcattgaattttcgtcttcttatcctcgatccttcgtgtgatat 302  Q
    ||||||||||||||||| | |||||||||||||||||||||| ||| |||||  | | ||||  |||   ||||| |||||| ||  |||| || ||| |    
T  23223665 ggaacttgaaatgaatttttttcactttgtattgtcttcaaaaaaccttctatgaattattggttttcaatcttcatatccttgaatcttcatgcgatgt 23223566  T
Q  303 cttgttttttcgatctacatgatttctcatta-aaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcga-tta 398  Q
    ||||  || | ||| |||||||||||||| || |||| | | ||  || || |||||||||||||||||||||||||||||||||||| ||||||| | |    
T  23223565 cttgacttgttgatttacatgatttctcactacaaaacattaaaaacacctttggagttgcatgatttaggataaaagtaaattacaacgaatcgagtga 23223466  T
Q  399 aaaagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    |||| |||||||   ||||||||||||||||| ||||||||    
T  23223465 aaaaaaatacaatgtgttcctcaaaccattgacaactcctc 23223425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 210 - 439
Target Start/End: Original strand, 25494357 - 25494580
Alignment:
Q  210 ttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatc-attgaattttcgtcttcttatcctcgatccttcgtgtgatatcttgtt 308  Q
    |||||||||||| |||||||||||||||||||||||| | ||||||| | | ||||   ||   ||||| |||| | | |||||  |||||| ||||| |    
T  25494357 ttgaaatgaattttcttcactttgtattgtcttcaaaaaccttctaagaaccattggtcttcaatcttcatatctt-gctccttaatgtgatgtcttgat 25494455  T
Q  309 ttttcgatctacatgatttctcattaaaaagactcaacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatac 408  Q
    || ||||| |||||||||||||| || |||      ||| ||||| ||||||||||||||||||||||||||||||||| || || |   |||| || ||    
T  25494456 ttgtcgatttacatgatttctcactacaaa------acacctatgtagttgcatgatttaggataaaagtaaattacaaggactcaagagaaaacaagac 25494549  T
Q  409 aaaaagttcctcaaaccattgaaaactcctc 439  Q
    || | ||||||||||||||||| ||||||||    
T  25494550 aatatgttcctcaaaccattgacaactcctc 25494580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 205 - 439
Target Start/End: Complemental strand, 30675735 - 30675498
Alignment:
Q  205 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatc-attgaattttcgtcttcttatcctcgatccttcgtgtgatatc 303  Q
    ||||||||||||||||| ||||||||||||||| |||||||| | ||||||| | | ||||| |||   |||||  || || ||||||||   |||| ||    
T  30675735 ggaacttgaaatgaattttcttcactttgtattatcttcaaaaaccttctaagaaccattga-tttcaatcttcacattcttgatccttcacatgatgtc 30675637  T
Q  304 ttgttttttcgatctacatgatttctcatta-aaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaa 400  Q
    ||   ||  |||| |||||||||||||| || |||| ||||||  || ||||||||||||||||| ||||| ||||||  ||||||| || |||| | ||    
T  30675636 ttaaattgccgatttacatgatttctcactataaaacactcaaaacacctatggagttgcatgatataggacaaaagtgtattacaacgactcgagtgaa 30675537  T
Q  401 aagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    || ||||||| | ||||||||||||||||| ||||||||    
T  30675536 aacaatacaatatgttcctcaaaccattgacaactcctc 30675498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 168 - 482
Target Start/End: Complemental strand, 21548936 - 21548619
Alignment:
Q  168 accctttttcggccattctttcatcttttaatcccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatc-attgaa 266  Q
    ||||||||||   ||||||||| |||| |||| ||||||||||| ||||||||| | ||||  ||||||| |||||||||  ||||||| | | ||| |     
T  21548936 accctttttctagcattctttcgtcttgtaatgccttggaacttcaaatgaatttttttcaacttgtattatcttcaaatgtcttctaagaaccatttag 21548837  T
Q  267 ttttcgtcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactc--aacaactatggagttgcatga 364  Q
     ||   ||||| ||||| | || |||   ||||| |||||||||| |||| ||| ||||||| || || ||||||||  ||||  |||||||||||||      
T  21548836 cttcaatcttcatatccacaattctttacgtgatgtcttgtttttccgatttacttgatttcacactagaaagactccaaacacttatggagttgcattt 21548737  T
Q  365 tttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaa 464  Q
    |||||||||||| | |||||||| || |||| | |||| |||| |||||||| ||||||||||    |||||||  ||| ||||   ||||| ||||||     
T  21548736 tttaggataaaactgaattacaacgactcgaatgaaaacaatataaaaagtttctcaaaccatcatcaactcctttaatggactactaatttgccttcat 21548637  T
Q  465 atgcaaataattacacta 482  Q
    |||||||||| |||||||    
T  21548636 atgcaaataaatacacta 21548619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 205 - 439
Target Start/End: Complemental strand, 26657727 - 26657490
Alignment:
Q  205 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatc-attgaattttcg-tcttcttatcctcgatccttcgtgtgatat 302  Q
    ||||||||||||||||| |||||||||||| ||||||||||| | ||| ||| | | ||||| ||  || | ||| || ||| ||||||||   | || |    
T  26657727 ggaacttgaaatgaattttcttcactttgttttgtcttcaaaaaccttataagaactattgactt--cgattttcatagccttgatccttcacctaatgt 26657630  T
Q  303 cttgttttttcgatctacatgatttctcatta-aaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaa 399  Q
    |||| ||| ||||| |||||||||| ||| || |||| ||||||  || |||||||||||| |||| |||||||||||| |||||||| ||||||| | |    
T  26657629 cttgatttgtcgatttacatgatttttcactacaaaacactcaaaacacctatggagttgcgtgatctaggataaaagtgaattacaacgaatcgagtga 26657530  T
Q  400 aaagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    ||| ||||||  |  |||||||||||||||| ||||||||    
T  26657529 aaacaatacattatattcctcaaaccattgacaactcctc 26657490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 286 - 471
Target Start/End: Complemental strand, 18795350 - 18795163
Alignment:
Q  286 gatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaatt 383  Q
    ||||| || |||||| |||||||||   ||| |||| ||||||||| ||||| |||||||  || ||||| || || |||| ||||||||||||||||||    
T  18795350 gatccatcatgtgatgtcttgttttgctgatttacacgatttctcactaaaatgactcaaaacacctatgaagctgtatgacttaggataaaagtaaatt 18795251  T
Q  384 acaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaa 471  Q
    ||||| | || | | ||||  |||||||| ||||||||||||||||| || ||||| ||  ||| |   |||||||||||||||||||    
T  18795250 acaattactcaaatgaaaacgatacaaaatgttcctcaaaccattgataaatcctctaaatgacctcttattttccttcaaatgcaaa 18795163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 273 - 429
Target Start/End: Original strand, 25727841 - 25728000
Alignment:
Q  273 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcatta-aaaagactcaa--caactatggagttgcatgatttag 369  Q
    ||||| ||||||  ||||||| |||||||| ||| ||| ||||| |||||||||||||| || |||| ||||||  || |||| ||||||||||||||||    
T  25727841 tcttcatatccttaatccttcatgtgatatattgatttgtcgatttacatgatttctcactacaaaacactcaaaacacctattgagttgcatgatttag 25727940  T
Q  370 gataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattg 429  Q
    ||||||||| |||||||| || | || | |||| ||||||| |  ||||| |||||||||    
T  25727941 gataaaagtgaattacaacgattagagtgaaaacaatacaatacattccttaaaccattg 25728000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 273 - 429
Target Start/End: Original strand, 25736249 - 25736408
Alignment:
Q  273 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcatta-aaaagactcaa--caactatggagttgcatgatttag 369  Q
    ||||| ||||||  ||||||| |||||||| ||| ||| ||||| |||||||||||||| || |||| ||||||  || |||| ||||||||||||||||    
T  25736249 tcttcatatccttaatccttcatgtgatatattgatttgtcgatttacatgatttctcactacaaaacactcaaaacacctattgagttgcatgatttag 25736348  T
Q  370 gataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattg 429  Q
    ||||||||| |||||||| || | || | |||| ||||||| |  ||||| |||||||||    
T  25736349 gataaaagtgaattacaacgattagagtgaaaacaatacaatacattccttaaaccattg 25736408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 349 - 435
Target Start/End: Complemental strand, 19884276 - 19884190
Alignment:
Q  349 ctatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaact 435  Q
    |||||||||||||||||||||||||||||  |||||||  ||||||| | |||| |||| |||| ||||||||||||||||| ||||    
T  19884276 ctatggagttgcatgatttaggataaaagagaattacatcgaatcgaatgaaaacaatataaaaggttcctcaaaccattgataact 19884190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 274 - 423
Target Start/End: Original strand, 27461114 - 27461266
Alignment:
Q  274 cttcttatcctcgatccttcgtgtgatatcttgttttttc-gatctacatgatttctcattaaaaagactc--aacaactatggagttgcatgatttagg 370  Q
    |||| ||||||||||| ||| |||||| |||||||||||| ||  |||||||||||| | ||||||||||   |||| ||||| |||||||| |||||||    
T  27461114 cttcatatcctcgatctttcatgtgatgtcttgttttttccgacttacatgatttcttactaaaaagactacaaacacctatgaagttgcataatttagg 27461213  T
Q  371 ataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaa 423  Q
    |||||||| ||||| ||  | | || | |||| ||||||||| ||||||||||    
T  27461214 ataaaagtgaattataacaacttgaatgaaaacaatacaaaatgttcctcaaa 27461266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 23506010 - 23505965
Alignment:
Q  202 cttggaacttgaaatgaattatcttcactttgtattgtcttcaaat 247  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  23506010 cttggaacttgaaatgaattttcttcactttgtattgtcttcaaat 23505965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 281 - 430
Target Start/End: Original strand, 25730511 - 25730663
Alignment:
Q  281 tcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcatta-aaaagactc--aacaactatggagttgcatgatttaggataaaag 377  Q
    |||| |||||||| |||||||||||| ||| ||||| |||||||||||||  || |||| ||||  |||| || || ||||||||||||||||||||||     
T  25730511 tccttgatccttcatgtgatatcttgatttgtcgatttacatgatttctcgctacaaaacactcaaaacacctgtgaagttgcatgatttaggataaaat 25730610  T
Q  378 taaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattga 430  Q
    | |||| |||||| | || | |||| ||||||| | | ||||||| |||||||    
T  25730611 tgaatttcaatgatttgaatgaaaacaatacaatacgctcctcaagccattga 25730663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 439
Target Start/End: Complemental strand, 50047284 - 50047195
Alignment:
Q  350 tatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    |||||||||| |||||||||||||||||| |||||| |||| |||| | |||| ||||||| | ||| |||||| |||||| ||||||||    
T  50047284 tatggagttgtatgatttaggataaaagtgaattaccatgactcgagtgaaaacaatacaatatgtttctcaaatcattgacaactcctc 50047195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 387
Target Start/End: Complemental strand, 31313720 - 31313618
Alignment:
Q  287 atccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaatta 384  Q
    |||||||  ||||| | |||||||| | || |||||||||||| | |||||| ||||||  || ||||| |||||||||||||||||||||||| |||||    
T  31313720 atccttcacgtgatgtattgtttttccaatttacatgatttcttactaaaaaaactcaaaacacctatgaagttgcatgatttaggataaaagtgaatta 31313621  T
Q  385 caa 387  Q
    |||    
T  31313620 caa 31313618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 344 - 439
Target Start/End: Original strand, 8247663 - 8247758
Alignment:
Q  344 aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    |||| ||||||||||||||||| |||| |||||  |||||||||||| || | | |||| |||| || | ||||||||||||||||| | ||||||    
T  8247663 aacacctatggagttgcatgatctagggtaaaacaaaattacaatgactcaagtgaaaataataaaatatgttcctcaaaccattgatatctcctc 8247758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 357 - 439
Target Start/End: Complemental strand, 12810418 - 12810336
Alignment:
Q  357 ttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    ||||||||| |||||||||| | |||||||| || | || | |||| ||||||| | ||||||||||||||||| ||||||||    
T  12810418 ttgcatgatctaggataaaaatgaattacaacgacttgaatgaaaacaatacaatatgttcctcaaaccattgacaactcctc 12810336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 435
Target Start/End: Complemental strand, 18391186 - 18391100
Alignment:
Q  349 ctatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaact 435  Q
    ||||||| ||||||||| |||||||||||| |||||||| || || | | |||| |||| |||| ||| ||||||||||||| ||||    
T  18391186 ctatggaattgcatgatctaggataaaagttaattacaacgactcaaatgaaaataatataaaatgttactcaaaccattgacaact 18391100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 333 - 427
Target Start/End: Original strand, 15416966 - 15417062
Alignment:
Q  333 taaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccat 427  Q
    |||||||||||||  || ||||  |||||||||||||| ||||||||| ||||| ||||||| || | |||| |||| |||| ||| ||||||||||    
T  15416966 taaaaagactcaaaacacctatacagttgcatgatttaagataaaagtgaattaaaatgaattgaatgaaaacaataaaaaatgtttctcaaaccat 15417062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 205 - 245
Target Start/End: Original strand, 12423778 - 12423818
Alignment:
Q  205 ggaacttgaaatgaattatcttcactttgtattgtcttcaa 245  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  12423778 ggaacttgaaatgaatttccttcactttgtattgtcttcaa 12423818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 30782011 - 30781971
Alignment:
Q  205 ggaacttgaaatgaattatcttcactttgtattgtcttcaa 245  Q
    |||||||||||| |||| |||||||||||||||||||||||    
T  30782011 ggaacttgaaatcaattttcttcactttgtattgtcttcaa 30781971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 248
Target Start/End: Original strand, 25665629 - 25665676
Alignment:
Q  201 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaata 248  Q
    ||||||||||| |||||| || |||||||||||||||||||| |||||    
T  25665629 ccttggaacttcaaatgatttttcttcactttgtattgtctttaaata 25665676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 350 - 428
Target Start/End: Original strand, 12423926 - 12424004
Alignment:
Q  350 tatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccatt 428  Q
    |||||||||||||||| || ||||||| | ||||||||||| |||| | |||| ||||  | | |||||||||||||||    
T  12423926 tatggagttgcatgatctaagataaaactgaattacaatgactcgagtgaaaacaatatcatatgttcctcaaaccatt 12424004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 348 - 390
Target Start/End: Original strand, 23519768 - 23519810
Alignment:
Q  348 actatggagttgcatgatttaggataaaagtaaattacaatga 390  Q
    ||||| |||||||||||| |||||||||||| |||||||||||    
T  23519768 actatagagttgcatgatctaggataaaagtgaattacaatga 23519810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 258
Target Start/End: Original strand, 9252473 - 9252526
Alignment:
Q  205 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaata 258  Q
    |||||||| | |||||| ||||||||| |||||||||||||| | |||||||||    
T  9252473 ggaacttggactgaattttcttcacttagtattgtcttcaaaaaccttctaata 9252526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 389 - 469
Target Start/End: Original strand, 21550930 - 21551010
Alignment:
Q  389 gaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgca 469  Q
    ||||||| | |||| ||||||||| |||||||||||||| || |||||||| ||| ||| |   |||| ||||||||||||    
T  21550930 gaatcgaatgaaaacaatacaaaatgttcctcaaaccatagacaactcctctaattgacctctgatttgccttcaaatgca 21551010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 205 - 245
Target Start/End: Original strand, 23519632 - 23519672
Alignment:
Q  205 ggaacttgaaatgaattatcttcactttgtattgtcttcaa 245  Q
    |||||||||||| |||| |||||||||| ||||||||||||    
T  23519632 ggaacttgaaataaattttcttcactttctattgtcttcaa 23519672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 50047426 - 50047386
Alignment:
Q  205 ggaacttgaaatgaattatcttcactttgtattgtcttcaa 245  Q
    ||||||| ||||||||| |||||| ||||||||||||||||    
T  50047426 ggaacttaaaatgaattttcttcattttgtattgtcttcaa 50047386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 2e-41; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 207 - 467
Target Start/End: Complemental strand, 19331759 - 19331497
Alignment:
Q  207 aacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaata-tcattgaattttcgtcttcttatcctcgatccttcgtgtgatatctt 305  Q
    ||||| |||||| |||||||||| |||||||||||||||||  ||||||| | |||||||||||   ||||| |||||||||||||||   ||||   ||    
T  19331759 aacttcaaatgacttatcttcacattgtattgtcttcaaatgtcttctaaaaatcattgaatttcaatcttcatatcctcgatccttcacttgatgcttt 19331660  T
Q  306 gtttttt-cgatctacatgatttctcattaaaaagactcaacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaaga 404  Q
    ||||||  |||| ||||||||||||||  |||||||||||| |   ||||| |||||||||||||||||||| |||||||||| || |||| | || | |    
T  19331659 gtttttaacgatttacatgatttctcacaaaaaagactcaaaacacatggaattgcatgatttaggataaaactaaattacaacgactcgaatgaacaca 19331560  T
Q  405 atacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatg 467  Q
    |||||||||||| ||||||| ||||| |||||||| ||| || ||  ||||||||||||||||    
T  19331559 atacaaaaagtttctcaaacaattgacaactcctctaattgaattctaattttccttcaaatg 19331497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 344 - 522
Target Start/End: Original strand, 23157794 - 23157975
Alignment:
Q  344 aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaat 443  Q
    |||| ||||| | |||||||||||| ||||||||| |||||||| || || | | |||| ||||| ||||||||||||||||||||| |||||||| |||    
T  23157794 aacacctatgcatttgcatgatttatgataaaagtgaattacaacgactcaaatgaaaacaataccaaaagttcctcaaaccattgacaactcctctaat 23157893  T
Q  444 agactttcaattttccttcaaatgcaaataattacactaaaaataa---agctaaaaatatcatatgttattccatcatcaa 522  Q
     |||||  |||||||||||||||||||| ||    |||||||| ||   ||| ||||| |||||||||||||||||||||||    
T  23157894 tgacttctaattttccttcaaatgcaaagaaaataactaaaaaaaacatagcaaaaaacatcatatgttattccatcatcaa 23157975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 287 - 521
Target Start/End: Complemental strand, 20694808 - 20694572
Alignment:
Q  287 atccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaatta 384  Q
    ||||||| | |||| |||||||||  |||| |||||||||||| | |||||||||||||  ||  |||| ||||| || |||| |||||||| | |||||    
T  20694808 atccttcatatgatgtcttgttttgccgatttacatgatttcttactaaaaagactcaaaacacatatgcagttgaataatttgggataaaactgaatta 20694709  T
Q  385 caatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc-aaatagactttcaattttccttcaaatgcaaataattacactaa 483  Q
    |||||| |||| | |||| ||||||||||||||||||||||||||| || ||||| |||||  |||| |||||||||| ||||||||||||    |||||    
T  20694708 caatgactcgaatgaaaacaatacaaaaagttcctcaaaccattgacaaatcctctaaata-tcttttaattttcctttaaatgcaaataaaataactaa 20694610  T
Q  484 aaataaagctaaaaatatcatatgttattccatcatca 521  Q
    ||| | |||| ||| ||||||||| | |||||| ||||    
T  20694609 aaacatagcttaaagtatcatatgatgttccattatca 20694572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 202 - 436
Target Start/End: Original strand, 7742730 - 7742967
Alignment:
Q  202 cttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatc-attgaattttcgtcttcttatcctcgatccttcgtgtgat 300  Q
    |||| ||||||||| || || |||||||||||||||||||||||| | ||||||| | | |||||  ||  |||||| |||| ||||| ||||  |||||    
T  7742730 cttgaaacttgaaacgatttttcttcactttgtattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgat 7742829  T
Q  301 atcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgatta 398  Q
     | |||||||   ||| ||||||||||||||||||||| ||||||  ||  ||||   || ||||||||||||||||||| |||||||| || ||||       
T  7742830 gttttgttttactgatttacatgatttctcattaaaaaaactcaaaacacatatgattttacatgatttaggataaaagtgaattacaaagactcgaacg 7742929  T
Q  399 aaaagaatacaaaaagttcctcaaaccattgaaaactc 436  Q
    |||| ||||||||| |||| |||||||||||| |||||    
T  7742930 aaaacaatacaaaatgttcttcaaaccattgacaactc 7742967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 169 - 436
Target Start/End: Original strand, 19763713 - 19763988
Alignment:
Q  169 ccctttttcggccattctttcatcttttaatcccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatc-------a 261  Q
    ||||||||||  | ||||| ||||||| ||||| ||||||||||||||||||| ||||||||||||||| |||||||| | ||||||| | |            
T  19763713 ccctttttcgagcgttcttccatctttcaatcctttggaacttgaaatgaattttcttcactttgtattatcttcaaaaaccttctaagaacccttgatc 19763812  T
Q  262 ttgaattttc-gtcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaacaactatggagttgc 360  Q
    || ||| |||  ||||| | |||| ||| ||||   |||| ||| |||||  |||| |||||||||||||| ||||||||||||| |   ||| ||||||    
T  19763813 ttcaatcttcaatcttcatttccttgattcttcacttgatgtctcgttttgccgatttacatgatttctcactaaaaagactcaaaacacatgaagttgc 19763912  T
Q  361 atgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactc 436  Q
    |||||||||||||||| | || |||| ||  || | | |||| ||||||||||||||| |||||| |||| |||||    
T  19763913 atgatttaggataaaactgaactacattgcctcaaatgaaaacaatacaaaaagttccacaaacccttgagaactc 19763988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 273 - 439
Target Start/End: Complemental strand, 26070656 - 26070488
Alignment:
Q  273 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactc--aacaactatggagttgcatgatttagg 370  Q
    ||||| |||||| |||||||| |||||| |||||||||  | || |||||||||||||| |||||||||||  ||||  ||||||||||||||||||| |    
T  26070656 tcttcatatccttgatccttcatgtgatgtcttgttttgccaatttacatgatttctcactaaaaagactcaaaacacttatggagttgcatgatttatg 26070557  T
Q  371 ataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    |||||| | ||||||| | | |||| | |||| ||||| |||  |||||||||  ||||| ||||||||    
T  26070556 ataaaactgaattacattaactcgaatgaaaacaatactaaattttcctcaaatgattgacaactcctc 26070488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 279 - 439
Target Start/End: Complemental strand, 24841930 - 24841767
Alignment:
Q  279 tatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcatta-aaaagact--caacaactatggagttgcatgatttaggataaa 375  Q
    |||||| ||||||||  ||| | ||||| |||||| || |||||||||||||| || |||| |||   |||| |||||||||| |||||| |||||||||    
T  24841930 tatccttgatccttcacgtgttgtcttgatttttcaatttacatgatttctcactacaaaacactaaaaacacctatggagttccatgatctaggataaa 24841831  T
Q  376 agtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    ||| | |||||| || |||| | |||| ||||||| | ||||||||||||||||||||||||||    
T  24841830 agtgacttacaacgactcgagtgaaaacaatacaatatgttcctcaaaccattgaaaactcctc 24841767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 344 - 436
Target Start/End: Complemental strand, 18222602 - 18222510
Alignment:
Q  344 aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactc 436  Q
    |||| ||||||| |||||||||||||||||||||| ||||||||||| |||| | |||| ||||||| | ||| ||||||||||||| |||||    
T  18222602 aacacctatggatttgcatgatttaggataaaagtgaattacaatgactcgagttaaaacaatacaatatgtttctcaaaccattgacaactc 18222510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 334 - 471
Target Start/End: Complemental strand, 20083586 - 20083448
Alignment:
Q  334 aaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaa 431  Q
    ||||||||||||  || ||||||| ||||||||||||||||| || | ||||||||  | |||| |||||| |||| |||| ||||||||||| |||||     
T  20083586 aaaaagactcaaaacacctatggaattgcatgatttaggatagaactgaattacaaatactcgaataaaaacaataaaaaatgttcctcaaactattgac 20083487  T
Q  432 aactcctcaaatagactttcaattttccttcaaatgcaaa 471  Q
    |||||||| |||| | ||| ||||| ||||||||||||||    
T  20083486 aactcctctaata-atttttaatttgccttcaaatgcaaa 20083448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 205 - 439
Target Start/End: Original strand, 25594556 - 25594793
Alignment:
Q  205 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatc-attgaattttcgtcttcttatcctcgatccttcgtgtgatatc 303  Q
    |||||||||| |||||| ||||||||||| ||| ||| |||| | ||||||||||| |||||  ||   ||||| |||||| |||| ||| |||||| ||    
T  25594556 ggaacttgaa-tgaattttcttcactttgcattatctacaaaaaccttctaatatccattgatattcaatcttcatatccttgatcgttcatgtgatgtc 25594654  T
Q  304 ttgttttttcgatctacatgatttctcatta-aaaagactc--aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaa 400  Q
    ||  ||||||||| |||||||||||||| || |||| ||||  ||||  |||| |||||||| ||||||||||||| | || |||||  | || | | ||    
T  25594655 ttaatttttcgatttacatgatttctcactataaaacactcaaaacacatatgaagttgcatcatttaggataaaaatgaaatacaacaactccagtgaa 25594754  T
Q  401 aagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    || ||||||| | ||||||||||||||||| || |||||    
T  25594755 aacaatacaatatgttcctcaaaccattgagaaatcctc 25594793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 205 - 387
Target Start/End: Original strand, 26329933 - 26330116
Alignment:
Q  205 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaa-tatcattgaattttcgtcttcttatcctcgatccttcgtgtgatatc 303  Q
    ||||||||||||||||| |||||||||||||||||||| ||| | |||||||  | ||||| | ||   ||||| |||||| |||||||| |||||| ||    
T  26329933 ggaacttgaaatgaattttcttcactttgtattgtcttaaaaaaccttctaaggaccattg-acttcaatcttcatatccttgatccttcatgtgatgtc 26330031  T
Q  304 ttgttttttcgatctacatgatttctcattaaaaagactc--aacaactatggagttgcatgatttaggataaaagtaaattacaa 387  Q
    ||| |||||| || ||||||||||| | |  |||| ||||  |||| ||||| ||||||||||| |||||||||||  ||||||||    
T  26330032 ttgatttttcaatttacatgatttcac-tacaaaacactcaaaacacctatgaagttgcatgatctaggataaaagggaattacaa 26330116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 205 - 377
Target Start/End: Original strand, 11274193 - 11274369
Alignment:
Q  205 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatc-attgaattttcgtcttcttatcctcgatccttcgtgtgatatc 303  Q
    ||||||||||||||| | || |||  |||||||||||||||| | ||||||| | | ||||   ||   ||||| |||||| |||||||| |||||| ||    
T  11274193 ggaacttgaaatgaaatttcatcatcttgtattgtcttcaaagaccttctaagaaccattggtcttcaatcttcatatccttgatccttcatgtgatgtc 11274292  T
Q  304 ttgttttttcgatctacatgatttctcatta-aaaagactcaa--caactatggagttgcatgatttaggataaaag 377  Q
    ||| ||| ||||| |||||||||||| | || |||| ||||||  || |||||||||||||||||||||||||||||    
T  11274293 ttgatttgtcgatatacatgatttcttactacaaaacactcaaaacacctatggagttgcatgatttaggataaaag 11274369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 213 - 376
Target Start/End: Complemental strand, 25367836 - 25367671
Alignment:
Q  213 aaatgaattatcttcactttgtattgtcttcaaataacttctaatatc-attgaattttcgtcttcttatcctcgatccttcgtgtgatatcttgttttt 311  Q
    ||||||||| |||||||||| |||| |||||||||  ||||||| | | |||||| |||  ||||| |||| |||||  ||| ||||||  |||  ||||    
T  25367836 aaatgaattttcttcactttctatt-tcttcaaatgtcttctaagaaccattgaactttaatcttcgtatcatcgatatttcatgtgatgcctttctttt 25367738  T
Q  312 tcgatctacatgatttctcattaaaaagactc--aacaactatggagttgcatgatttaggataaaa 376  Q
     |||| |||||||||||||| |||||||||||  |||| ||||| |||||||||||||| |||||||    
T  25367737 ccgatttacatgatttctcactaaaaagactcaaaacacctatgaagttgcatgatttatgataaaa 25367671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 280 - 439
Target Start/End: Original strand, 24410869 - 24411030
Alignment:
Q  280 atcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaag 377  Q
    |||||||||||||| |||||| |||| ||||  | ||  ||||||||||||| |||||| ||||||  || ||    ||||||| ||||||||||||||     
T  24410869 atcctcgatccttcatgtgatgtcttattttgccaattgacatgatttctcactaaaaatactcaaaacacctcgcaagttgcacgatttaggataaaac 24410968  T
Q  378 taaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    | |||||||| || || | | |||| |||||||||  |||||||||||||||| ||||||||    
T  24410969 tgaattacaacgactcaaatgaaaacaatacaaaattttcctcaaaccattgacaactcctc 24411030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 344 - 433
Target Start/End: Complemental strand, 25680705 - 25680616
Alignment:
Q  344 aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaa 433  Q
    |||| ||||| ||||||||||||||| |||||| | |||||||| || |||| | |||| ||||||| | ||||||||||||||||||||    
T  25680705 aacacctatgaagttgcatgatttagaataaaattgaattacaacgactcgagtgaaaacaatacaatatgttcctcaaaccattgaaaa 25680616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 344 - 436
Target Start/End: Complemental strand, 16634155 - 16634063
Alignment:
Q  344 aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactc 436  Q
    |||| |||| |||||||||||||||| |||||||| |||||||| || |||| | |||| ||||||| | ||| ||||||||||||| |||||    
T  16634155 aacacctatagagttgcatgatttagaataaaagtgaattacaacgactcgagtgaaaacaatacaatatgtttctcaaaccattgacaactc 16634063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 355 - 439
Target Start/End: Original strand, 17382052 - 17382136
Alignment:
Q  355 agttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    |||||||||||||||||||||||| || ||||| || | || | |||| ||||||| | ||||||||||||||||| ||||||||    
T  17382052 agttgcatgatttaggataaaagtgaaatacaacgatttgagtgaaaacaatacaatatgttcctcaaaccattgacaactcctc 17382136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 205 - 430
Target Start/End: Complemental strand, 17027778 - 17027550
Alignment:
Q  205 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaa-tatcattgaattttcgtcttcttatcctcgatccttcgtgtgatatc 303  Q
    |||| ||||||| |||| |||||||||||||||||||||||  | |||||||  | |||| || ||   ||||| |||| | |||| | |  ||||| ||    
T  17027778 ggaaattgaaattaattttcttcactttgtattgtcttcaagaaccttctaagaagcatt-aacttcaatcttcatatctttgatcttgcacgtgatgtc 17027680  T
Q  304 ttgttttttcgatctacatgatttctcat---taaaaagactcaacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaa 400  Q
    ||| ||||||||| |||||||||||||||    ||| || |  |||| |||||||||||| ||||||||||||||||| |||||||| || || | | ||    
T  17027679 ttgatttttcgatttacatgatttctcatggcaaaacagtcaaaacacctatggagttgcgtgatttaggataaaagtgaattacaacgactcaagtgaa 17027580  T
Q  401 aagaatacaaaaagttcctcaaaccattga 430  Q
    || ||| ||| | |||||||||||| ||||    
T  17027579 aacaattcaatatgttcctcaaacccttga 17027550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 398 - 521
Target Start/End: Original strand, 22643924 - 22644047
Alignment:
Q  398 aaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaataattacactaaaaataaagctaaaa 497  Q
    ||||| || ||| ||||||  |||||||||||| |||||||| ||  |||||  ||||||||||||||| |||| ||    |||||||||| | ||||||    
T  22643924 aaaaaaaaaacacaaagttaatcaaaccattgacaactcctctaaatgacttctaattttccttcaaatacaaagaaaataactaaaaatatacctaaaa 22644023  T
Q  498 atatcatatgttattccatcatca 521  Q
    |||| ||||||||||| |||||||    
T  22644024 atattatatgttattcaatcatca 22644047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 344 - 439
Target Start/End: Complemental strand, 24517463 - 24517368
Alignment:
Q  344 aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    |||| |||||||||| ||||||| |||||||| || |||||||| || |||  | |||| ||||||| | ||||||||||||||||| ||||||||    
T  24517463 aacacctatggagttacatgattaaggataaatgtgaattacaacgactcgggtgaaaacaatacaatatgttcctcaaaccattgacaactcctc 24517368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 206 - 438
Target Start/End: Original strand, 16622541 - 16622767
Alignment:
Q  206 gaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatc-attgaattttcgtcttcttatcctcgatccttcgtgtgatatct 304  Q
    |||||||||||||||| |||||| ||||||||||||||||| | ||||||| | | | ||   ||   ||||| ||||||  ||||||| |||||| |||    
T  16622541 gaacttgaaatgaattttcttcaatttgtattgtcttcaaa-accttctaagaaccactggtcttcaatcttcatatccttaatccttcatgtgatgtct 16622639  T
Q  305 tgttttttcgatctacatgatttctcattaaaaagactcaacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaaga 404  Q
    || ||| || || |||||||||||||| |  |||      ||| ||||| ||||||||||| ||||||||||||  |||||||  ||| || | || | |    
T  16622640 tgatttgtcaatttacatgatttctcactgcaaa------acacctatgaagttgcatgatctaggataaaagtgtattacaacaaatagagtgaataca 16622733  T
Q  405 atacaaaaagttcctcaaaccattgaaaactcct 438  Q
    |||||| | ||||||||||||||||| |||||||    
T  16622734 atacaacatgttcctcaaaccattgacaactcct 16622767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 202 - 292
Target Start/End: Original strand, 18872912 - 18873002
Alignment:
Q  202 cttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatcattgaattttcgtcttcttatcctcgatcctt 292  Q
    |||||||||| ||||||||| |||||| |||||||||||||||| || | |||||  |||||||| || | ||||| ||||||| ||||||    
T  18872912 cttggaacttcaaatgaattttcttcaatttgtattgtcttcaactaccgtctaaactcattgaacttccatcttcatatcctccatcctt 18873002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 353 - 427
Target Start/End: Complemental strand, 24268655 - 24268581
Alignment:
Q  353 ggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccat 427  Q
    ||||||||||||| |||||||||||| ||||| ||||| |||| | |||| ||||||| | ||||||||||||||    
T  24268655 ggagttgcatgatctaggataaaagtgaattataatgactcgagtgaaaacaatacaagatgttcctcaaaccat 24268581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 353 - 427
Target Start/End: Complemental strand, 24345284 - 24345210
Alignment:
Q  353 ggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccat 427  Q
    ||||||||||||| |||||||||||| ||||| ||||| |||| | |||| ||||||| | ||||||||||||||    
T  24345284 ggagttgcatgatctaggataaaagtgaattataatgactcgagtgaaaacaatacaagatgttcctcaaaccat 24345210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 201 - 387
Target Start/End: Complemental strand, 18178357 - 18178166
Alignment:
Q  201 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatcattgaattttcg-tcttcttatcctcgatccttcgtgtga 299  Q
    ||||||||||||| ||||||| | |||| |||||||| |||||||| | |||| || | || |   | |||  ||||| ||||||||||||||| || |     
T  18178357 ccttggaacttgagatgaattttattcaatttgtattatcttcaaagaccttccaagaacaattggtcttcaatcttcatatcctcgatccttcatgcgg 18178258  T
Q  300 tatcttgttttttcga-tctacatgatttctcattaaaaagact--caacaactatggagttgc-atgatttaggataaaagtaaattacaa 387  Q
    | |||||||||||| | | |||||||||||||| ||||||||||   || | ||||| |||||| |||||||||||||||| | ||||||||    
T  18178257 tgtcttgttttttccaatttacatgatttctcactaaaaagactaaaaatacctatgaagttgcaatgatttaggataaaactgaattacaa 18178166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 344 - 438
Target Start/End: Complemental strand, 15205752 - 15205658
Alignment:
Q  344 aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcct 438  Q
    |||| ||||||| ||||||||| ||||| |||| | |||||||| || |||| | |||| ||||||| | ||||||||||||| ||| |||||||    
T  15205752 aacacctatggaattgcatgatctaggagaaaactgaattacaacgactcgagtgaaaacaatacaatatgttcctcaaaccactgacaactcct 15205658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 452 - 518
Target Start/End: Complemental strand, 25367621 - 25367555
Alignment:
Q  452 aattttccttcaaatgcaaataattacactaaaaataaagctaaaaatatcatatgttattccatca 518  Q
    |||||||||||||||||||| || || |||||||| | || ||||||  ||||||||||||||||||    
T  25367621 aattttccttcaaatgcaaagaaatatactaaaaacatagttaaaaacgtcatatgttattccatca 25367555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 439
Target Start/End: Original strand, 12340026 - 12340115
Alignment:
Q  350 tatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    |||| ||||||||||| ||| |||||| | |||||||||||  | | | |||| |||| || | ||||||||||||||||| ||||||||    
T  12340026 tatgaagttgcatgatctagtataaaactgaattacaatgacacaagtgaaaataatataatatgttcctcaaaccattgacaactcctc 12340115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 22643746 - 22643811
Alignment:
Q  183 ttctttcatcttttaatcccttggaacttgaaatgaattatcttcactttgtattgtcttcaaata 248  Q
    ||||||| ||||  ||| |||||||  |||||||||||| |||||| |||||||||| ||||||||    
T  22643746 ttctttcgtcttgcaataccttggagtttgaaatgaattttcttcagtttgtattgtattcaaata 22643811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 344 - 412
Target Start/End: Original strand, 11997900 - 11997968
Alignment:
Q  344 aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaa 412  Q
    |||| ||||| ||||||||||||||| ||||||| ||||| ||||||   || |||||| |||||||||    
T  11997900 aacacctatgaagttgcatgatttagtataaaaggaaattgcaatgacctgaataaaaacaatacaaaa 11997968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 207 - 239
Target Start/End: Original strand, 18452677 - 18452709
Alignment:
Q  207 aacttgaaatgaattatcttcactttgtattgt 239  Q
    ||||||||||||||| |||||||||||||||||    
T  18452677 aacttgaaatgaattttcttcactttgtattgt 18452709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 30072366 - 30072330
Alignment:
Q  206 gaacttgaaatgaattatcttcactttgtattgtctt 242  Q
    |||||||||||||| | ||||||||||||||||||||    
T  30072366 gaacttgaaatgaaatttcttcactttgtattgtctt 30072330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 8e-38; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 273 - 521
Target Start/End: Complemental strand, 19541219 - 19540969
Alignment:
Q  273 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttagg 370  Q
    ||||| |||||||||||||||   |||| |||| ||||  |||| |||||||||||||| || ||||||||||  || ||||||||||||||||||||||    
T  19541219 tcttcatatcctcgatccttcacttgatgtcttattttgccgatttacatgatttctcactagaaagactcaaaacacctatggagttgcatgatttagg 19541120  T
Q  371 ataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttc-aattttccttcaaatgca 469  Q
    |||||| | ||||||||||| |||||| |||  ||||||||||||||||||||||||| | ||||||| | ||| |  ||| ||||||||||||||||||    
T  19541119 ataaaactgaattacaatgactcgattgaaataaatacaaaaagttcctcaaaccattaacaactcct-atatataaattctaattttccttcaaatgca 19541021  T
Q  470 aataattacactaaaaataaagctaaaaatatcatatgttattccatcatca 521  Q
    || ||    |||||||| | ||  |||||| ||||||| | |||||||||||    
T  19541020 aagaaaataactaaaaacataggcaaaaatctcatatgatgttccatcatca 19540969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 370 - 521
Target Start/End: Original strand, 29647577 - 29647728
Alignment:
Q  370 gataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgca 469  Q
    ||||||||| |||||||| || || | | |||| |||| ||||||||||||||| || ||| |||| ||| ||| |||||  ||||| ||||||||||||    
T  29647577 gataaaagtgaattacaacgactcaaatgaaaacaatataaaaagttcctcaaatcaatgacaactactctaattgacttctaatttgccttcaaatgca 29647676  T
Q  470 aataattacactaaaaataaagctaaaaatatcatatgttattccatcatca 521  Q
    |||||||||||||| || | ||||||||| ||||||||||||||||||||||    
T  29647677 aataattacactaacaacatagctaaaaacatcatatgttattccatcatca 29647728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 278 - 439
Target Start/End: Original strand, 21849011 - 21849174
Alignment:
Q  278 ttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaacaa--ctatggagttgcatgatttaggataaa 375  Q
    ||||||| |||||||| |||||| ||||||| || |||| ||||| |||||||| ||||||||||||| ||  |||||||||||||||||||| ||||||    
T  21849011 ttatccttgatccttcatgtgatgtcttgttcttccgatttacattatttctcactaaaaagactcaaaaatcctatggagttgcatgatttatgataaa 21849110  T
Q  376 agtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattga-aaactcctc 439  Q
    | | ||||||||||| || |   |||| ||||||||| ||||||||||||||||| |||||||||    
T  21849111 actgaattacaatgactc-aaagaaaacaatacaaaatgttcctcaaaccattgacaaactcctc 21849174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 344 - 521
Target Start/End: Original strand, 27917989 - 27918165
Alignment:
Q  344 aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaat 443  Q
    |||| ||||||||||||||||||||| |||||||| |||||||| || || | | |||| |||||  || ||||||||||||| ||| |||||||  | |    
T  27917989 aacacctatggagttgcatgatttagtataaaagtgaattacaacgactcaaatgaaaacaatacccaacgttcctcaaaccaatgacaactcctatagt 27918088  T
Q  444 agactttcaattttccttcaaatgcaaataattacactaaaaataaagctaaaaatatcatatgttattccatcatca 521  Q
     || ||  ||||| |||||||||||||| ||||||| | |||| | ||||||||||||||||||||||||||||||||    
T  27918089 tgaattctaatttgccttcaaatgcaaagaattaca-ttaaaacatagctaaaaatatcatatgttattccatcatca 27918165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 273 - 509
Target Start/End: Complemental strand, 24047564 - 24047326
Alignment:
Q  273 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaacaa--ctatggagttgcatgatttagg 370  Q
    ||||| |||||| |||||||| || ||| |||||||||  |||| |  | ||||||||| ||||| ||| ||| |   |||||||||||||| |||||||    
T  24047564 tcttcatatccttgatccttcatgggatgtcttgttttgccgatttgtaggatttctcactaaaatgacccaaaatgcctatggagttgcataatttagg 24047465  T
Q  371 ataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc-aaatagactttcaattttccttcaaatgca 469  Q
    |||||||| ||||||||||| |||| | |||| ||||||||| |||||| |||||||||| || | ||| ||||| || |   |||||||||||||||||    
T  24047464 ataaaagtgaattacaatgactcgaatgaaaacaatacaaaatgttccttaaaccattgacaatttctctaaata-acctcttattttccttcaaatgca 24047366  T
Q  470 aataattacactaaaaataaagctaaaaatatcatatgtt 509  Q
    |||||    |||||||| | |||  |||||||||||||||    
T  24047365 aataaaataactaaaaacatagcctaaaatatcatatgtt 24047326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 201 - 430
Target Start/End: Original strand, 34063700 - 34063937
Alignment:
Q  201 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatc-attgaattttcgtcttcttatcctcgatccttcgtgtga 299  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||  ||||||||| | ||  || ||   ||||| |||| ||||||||||    ||    
T  34063700 ccttggaacttcaaatgaattttcttcactttgtattgtcttcaaatgtcttctaataaccatcaaaattaaatcttcatatcgtcgatccttcacacga 34063799  T
Q  300 tatcttgttttttcgatctacatgatttctcatt-----aaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaat 392  Q
    | |||||||||  |||| ||||||| |||||| |     ||||| ||||||  ||  | ||||||||||||||||||||||| ||| ||||||||  | |    
T  34063800 tgtcttgttttgccgatttacatgaattctcactcaaaaaaaaaaactcaaaacacttgtggagttgcatgatttaggataatagtgaattacaacaact 34063899  T
Q  393 cgattaaaaagaatacaaaaagttcctcaaaccattga 430  Q
    ||| | |||| ||||||||||||||| |||||||||||    
T  34063900 cgaatgaaaacaatacaaaaagttccacaaaccattga 34063937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 169 - 435
Target Start/End: Original strand, 18236130 - 18236399
Alignment:
Q  169 ccctttttcggccattctttcatcttttaatcccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatc-attgaat 267  Q
    ||||||||||  ||||||| | ||||| ||| |||| |||||||||||||||| ||||||  |||||||||||||||  | ||||||| | | ||||       
T  18236130 ccctttttcgatcattcttccgtctttaaatgcctttgaacttgaaatgaattttcttcatcttgtattgtcttcaacaaccttctaagaaccattggcc 18236229  T
Q  268 tttcgtcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaaca-ac-tatggagttgcatgat 365  Q
    ||   ||||| |||    |||||||| |||||| |||||||||  |||  |||||||||||||| ||||||||||||| | || ||||||||||||||||    
T  18236230 ttcaatcttcatatttgtgatccttcatgtgatgtcttgttttgccgagttacatgatttctcactaaaaagactcaaaatacttatggagttgcatgat 18236329  T
Q  366 ttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaact 435  Q
    ||| ||||||||| ||||| ||  | |||| | |||| |||| |||  ||| ||||||||||||| ||||    
T  18236330 ttaagataaaagtgaattataacaactcgaatgaaaacaatataaattgtttctcaaaccattgacaact 18236399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 318 - 510
Target Start/End: Original strand, 22388735 - 22388924
Alignment:
Q  318 tacatgatttctcattaaaaagactcaacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttc 417  Q
    |||||||||||||| | ||||||||||| ||  ||| |||||||||||| ||||||||| |  |||||||||| || | | |||| |||| |||||||||    
T  22388735 tacatgatttctcactgaaaagactcaaaaa--atgaagttgcatgattcaggataaaactggattacaatgactcaaatgaaaacaata-aaaaagttc 22388831  T
Q  418 ctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaataattacactaaaaataaagctaaaaatatcatatgtta 510  Q
    ||||||  ||||| |||||||| ||| |||||  ||||| |||||||||||||| ||     ||||||| | ||||||||| |||||||||||    
T  22388832 ctcaaattattgacaactcctctaattgacttctaatttgccttcaaatgcaaagaaaatatctaaaaacatagctaaaaacatcatatgtta 22388924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 206 - 376
Target Start/End: Original strand, 17415028 - 17415201
Alignment:
Q  206 gaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatc-attgaattttcgtcttcttatcctcgatccttcgtgtgatatct 304  Q
    |||||||||||||||| |||||||||| | |||||||||||||||| |||| | | ||||| |||   ||||| | |||||||||||||  ||||| |||    
T  17415028 gaacttgaaatgaattttcttcactttttgttgtcttcaaataactcctaagaaccattga-tttcaatcttcatgtcctcgatccttcacgtgatgtct 17415126  T
Q  305 tgttttttcgatctacatgatttctcattaaaaagactc--aacaactatg-gagttgcatgatttaggataaaa 376  Q
    ||||||  |||| |||| ||||||||| |||||||||||  |||| ||||| ||||||||| ||||| |||||||    
T  17415127 tgttttgccgatttacacgatttctcactaaaaagactcaaaacacctatgagagttgcattatttacgataaaa 17415201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 354 - 465
Target Start/End: Original strand, 17415211 - 17415322
Alignment:
Q  354 gagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaa 453  Q
    ||||||||| ||||| ||||||| ||||||||||| |||||| | |||| |||||||||| |||||||| ||||||| |||||||| ||  |||||  ||    
T  17415211 gagttgcattatttacgataaaactaaattacaatcaatcgaatgaaaacaatacaaaaatttcctcaacccattgacaactcctctaaatgacttctaa 17415310  T
Q  454 ttttccttcaaa 465  Q
    ||||||||||||    
T  17415311 ttttccttcaaa 17415322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 344 - 439
Target Start/End: Original strand, 21843008 - 21843103
Alignment:
Q  344 aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||| |||| | |||| ||||||| | |||||| |||||||||  ||||||||    
T  21843008 aacacctatagagttgcatgatttaggataaaagtaaattacaatgactcgaatgaaaacaatacaacatgttcctaaaaccattggcaactcctc 21843103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 297 - 486
Target Start/End: Complemental strand, 22511104 - 22510914
Alignment:
Q  297 tgatatcttgttttttcgatctacatgatttctcatta-aaaagactcaaca-actatggagttgcatgatttaggataaaagtaaattacaatgaatcg 394  Q
    |||| ||||| ||||||||| |||||||||||||| || |||| | |||| | |||||  |||||||  |||||||||||| ||||||||||  || |||    
T  22511104 tgatgtcttgatttttcgatttacatgatttctcactacaaaacaatcaaaacactatatagttgcacaatttaggataaacgtaaattacagcgactcg 22511005  T
Q  395 attaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaataattacactaaaaa 486  Q
    | | |||| ||||||||| |||||| |||||| || || |||||| |||  ||||  ||||| |||||||||||||| ||||||||||||||    
T  22511004 aatgaaaaaaatacaaaa-gttcctaaaaccaatggaagctcctctaatttacttataatttgccttcaaatgcaaaaaattacactaaaaa 22510914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 201 - 378
Target Start/End: Original strand, 27417122 - 27417303
Alignment:
Q  201 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatc-attgaattttcgtc-ttcttatcctcgatccttcgtgtg 298  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||| | ||||| | | | ||||  | |||  | ||| |||| | |||||||| ||||    
T  27417122 ccttggaacttgaaatgaattttcttcactttgtattgttttcaaaaaccttcttagaaccattgg-tcttcaacattcatatcattgatccttcatgtg 27417220  T
Q  299 atatcttgttttttcgatctacatgatttctcatta-aaaagact--caacaactatggagttgcatgatttaggataaaagt 378  Q
    || ||||| ||| ||||| |||||||||||||| || |||| |||   |||| ||||||||||||||||||||||||||||||    
T  27417221 atgtcttgatttgtcgatttacatgatttctcactacaaaacacttaaaacacctatggagttgcatgatttaggataaaagt 27417303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 355 - 439
Target Start/End: Original strand, 21844646 - 21844730
Alignment:
Q  355 agttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    |||||||||||||||||||| ||||||||||||||| |||| | |||| |||| || | |||||| |||||||||| ||||||||    
T  21844646 agttgcatgatttaggataagagtaaattacaatgactcgaatgaaaacaatataacatgttcctaaaaccattgacaactcctc 21844730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 296 - 435
Target Start/End: Original strand, 17240812 - 17240950
Alignment:
Q  296 gtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcga 395  Q
    ||||| |||||||||  | || || ||||||| ||| |||||| |||||||| ||||| ||||||||||||||| |||||| |||||||| | || ||||    
T  17240812 gtgatgtcttgttttgccaatttatatgatttttcactaaaaacactcaacacctatgaagttgcatgatttagaataaaactaaattacgacgactcga 17240911  T
Q  396 ttaaaaagaatacaaaaagttcctcaaaccattgaaaact 435  Q
     | |||| |||| |||||| ||||||||| ||||| ||||    
T  17240912 atgaaaacaatagaaaaag-tcctcaaactattgacaact 17240950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 280 - 435
Target Start/End: Original strand, 21505078 - 21505236
Alignment:
Q  280 atcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcatta-aaaagactcaa--caactatggagttgcatgatttaggataaaa 376  Q
    ||||| |||| ||| |||||| ||||  ||| ||||| ||||||||| |||| || |||| ||||||  || ||| | ||||||||||||||||||||||    
T  21505078 atccttgatctttcatgtgatgtcttaatttatcgatttacatgattcctcactacaaaacactcaaaacatctaagaagttgcatgatttaggataaaa 21505177  T
Q  377 gtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaact 435  Q
    |||||||| || || |||| | |||| ||||||| | | ||||||||||||||| ||||    
T  21505178 gtaaattataaagactcgagtgaaaacaatacaatatgctcctcaaaccattgacaact 21505236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 344 - 439
Target Start/End: Complemental strand, 35031811 - 35031716
Alignment:
Q  344 aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    |||| ||||||| ||||||||| |||||||||||||| |||||| || |||| | |||| ||||||| | ||||||||||||||| | ||||||||    
T  35031811 aacacctatggaattgcatgatctaggataaaagtaagttacaacgactcgagtgaaaacaatacaatatgttcctcaaaccattaacaactcctc 35031716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 202 - 427
Target Start/End: Complemental strand, 18818956 - 18818723
Alignment:
Q  202 cttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatcattgaattttc-gtct-----tcttatcctcgatccttcgt 295  Q
    ||||||||||||| |||||| |||||||||||||||||||||||| | ||||||| | |  | ||| ||| || |     || ||||||  |||||||      
T  18818956 cttggaacttgaattgaattttcttcactttgtattgtcttcaaagaccttctaagaaccattaatcttcagttttcatatcctatccttaatccttcac 18818857  T
Q  296 gtgatatcttgttttttcgatctacatgatttctcattaaaaagact--caacaactatggagttgcatgatttaggataaaagtaaattacaatgaatc 393  Q
    |||||  ||||||||  |||| |||||||||||||| ||||||||||   |||  ||||||| |||||||||||| ||||||| |||||| ||| || ||    
T  18818856 gtgatgccttgttttgccgatttacatgatttctcaataaaaagactgaaaacgtctatggacttgcatgatttatgataaaactaaatttcaacgactc 18818757  T
Q  394 gattaaaaagaatacaaaaagttcctcaaaccat 427  Q
     | | |||| |||| |||| |||||| |||||||    
T  18818756 aaatgaaaacaatataaaatgttccttaaaccat 18818723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 201 - 345
Target Start/End: Original strand, 14921898 - 14922043
Alignment:
Q  201 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatc-attgaattttcgtcttcttatcctcgatccttcgtgtga 299  Q
    |||||||| || |||||| || ||||||||||||||||||| || ||| ||||||| | | |||||| ||   ||||| |||||||||| ||||   |||    
T  14921898 ccttggaaattcaaatgatttttcttcactttgtattgtctacatataccttctaagaaccattgaacttcaatcttcatatcctcgattcttcacatga 14921997  T
Q  300 tatcttgttttttcgatctacatgatttctcattaaaaagactcaa 345  Q
    | | |||||||| |||| ||||||||||||||  ||||||||||||    
T  14921998 tgtattgtttttccgatttacatgatttctcacgaaaaagactcaa 14922043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 354 - 439
Target Start/End: Complemental strand, 17152252 - 17152167
Alignment:
Q  354 gagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    ||||||||||| ||| ||||||||| |||||||| || |||| | |||| |||||||||  |||||||||||||||| ||||||||    
T  17152252 gagttgcatgaattacgataaaagttaattacaacgactcgaatgaaaataatacaaaatattcctcaaaccattgacaactcctc 17152167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 334 - 387
Target Start/End: Complemental strand, 30705321 - 30705268
Alignment:
Q  334 aaaaagactcaacaactatggagttgcatgatttaggataaaagtaaattacaa 387  Q
    |||| ||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  30705321 aaaacgactcaacacctatgaagttgcatgatttaggataaaagtaaattacaa 30705268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 286 - 426
Target Start/End: Complemental strand, 39730616 - 39730474
Alignment:
Q  286 gatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaatt 383  Q
    |||||||| |||||| |||||||||   ||| || ||||||||||| |||||| ||||||  || ||   ||||||||||||||||||||||||| ||||    
T  39730616 gatccttcatgtgatgtcttgttttgctgatttatatgatttctcactaaaaatactcaaaacacctgcagagttgcatgatttaggataaaagtgaatt 39730517  T
Q  384 acaatgaatcgattaaaaagaatacaaaaagttcctcaaacca 426  Q
    |||| || | || ||||||  ||| |||| |||||| ||||||    
T  39730516 acaacgacttgaataaaaactatagaaaatgttccttaaacca 39730474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 201 - 426
Target Start/End: Complemental strand, 24188224 - 24187993
Alignment:
Q  201 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatc-attgaattttcg-tcttcttatcctcgatccttcgtgtg 298  Q
    |||||| ||||| |||||||  |||||||||||||||||||||||| |  |||||| ||| ||||  | |||  ||||| ||| || |||||||| ||||    
T  24188224 ccttggcacttggaatgaatcttcttcactttgtattgtcttcaaaaactttctaagatctattg--tcttcaatcttcatattcttgatccttcatgtg 24188127  T
Q  299 atatcttgttttttcgatctacatgatttctcatta-aaaagactcaa--caactatggagttgcatga---tttaggataaaagtaaattacaatgaat 392  Q
    ||  |||| ||  ||||| |||||||||||||| || |||| ||||||  ||  | |||||||| ||||   |||||||||||||| ||| ||||||| |    
T  24188126 atgccttgattggtcgatttacatgatttctcactacaaaatactcaaaacacatttggagttgaatgaatatttaggataaaagtgaatcacaatgact 24188027  T
Q  393 cgattaaaaagaatacaaaaagttcctcaaacca 426  Q
    ||| | || | |||||||||||||||| ||||||    
T  24188026 cgaatgaatacaatacaaaaagttccttaaacca 24187993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 205 - 245
Target Start/End: Original strand, 16593614 - 16593654
Alignment:
Q  205 ggaacttgaaatgaattatcttcactttgtattgtcttcaa 245  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  16593614 ggaacttgaaatgaattttcttcactttgtattgtcttcaa 16593654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 351 - 471
Target Start/End: Original strand, 32276526 - 32276646
Alignment:
Q  351 atggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagacttt 450  Q
    ||||||||| ||||||||| |||||  | ||||||||||| |||| |||||| ||| ||||| |||| |||||||||||| | |||||  ||  ||| |     
T  32276526 atggagttgaatgatttagaataaacttcaattacaatgactcgaataaaaacaatgcaaaatgttcttcaaaccattgacatctcctttaaatgacctc 32276625  T
Q  451 caattttccttcaaatgcaaa 471  Q
      |||||||||||||||||||    
T  32276626 ttattttccttcaaatgcaaa 32276646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 201 - 256
Target Start/End: Original strand, 22525679 - 22525734
Alignment:
Q  201 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaa 256  Q
    ||||| |||||||||| |||| |||||||||||| ||||||||||||| |||||||    
T  22525679 ccttgaaacttgaaataaattttcttcactttgtgttgtcttcaaataccttctaa 22525734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 439
Target Start/End: Original strand, 28278434 - 28278524
Alignment:
Q  349 ctatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    ||||||||||||||||| |||||||||||| |||||||| || || | | |||| ||||||  | |||| |||||||||||| || |||||    
T  28278434 ctatggagttgcatgatctaggataaaagtgaattacaacgactcaagtgaaaataatacactatgttcttcaaaccattgagaaatcctc 28278524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 206 - 436
Target Start/End: Complemental strand, 30999021 - 30998788
Alignment:
Q  206 gaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatcattgaattttcgtcttcttatcctcgatccttcgtgtgatatctt 305  Q
    |||||||||||||||| ||| |||||||||||||||||||  | ||||||| | |  |  || |||   | | |||||| ||||||||   |||||||||    
T  30999021 gaacttgaaatgaattttctccactttgtattgtcttcaacaaccttctaagaacccttgatcttcaattacatatccttgatccttcacttgatatctt 30998922  T
Q  306 gttttttcgatctacatgatttctcatta-aaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaa 402  Q
    | ||| ||||| ||||| | |  ||| || |||| ||||||  || ||||||||||| ||||| |||||||||| | || ||||| || || | | ||||    
T  30998921 gatttgtcgatttacatcactcttcactacaaaacactcaaaacacctatggagttgtatgatctaggataaaactgaagtacaacgactcaagtgaaaa 30998822  T
Q  403 gaatacaaaaagttcctcaaaccattgaaaactc 436  Q
     ||||||| | ||||||||||||||||| |||||    
T  30998821 caatacaatatgttcctcaaaccattgacaactc 30998788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 350 - 378
Target Start/End: Complemental strand, 15829233 - 15829205
Alignment:
Q  350 tatggagttgcatgatttaggataaaagt 378  Q
    |||||||||||||||||||||||||||||    
T  15829233 tatggagttgcatgatttaggataaaagt 15829205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 25474288 - 25474248
Alignment:
Q  205 ggaacttgaaatgaattatcttcactttgtattgtcttcaa 245  Q
    ||||| ||||||||||| |||||||||| ||||||||||||    
T  25474288 ggaacctgaaatgaattttcttcactttatattgtcttcaa 25474248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 3e-31; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 202 - 378
Target Start/End: Complemental strand, 17187427 - 17187250
Alignment:
Q  202 cttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatc-attgaattttcgtcttcttatcctcgatccttcgtgtgat 300  Q
    |||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| | | | |||| ||   ||||| ||||||| ||| |||   ||||    
T  17187427 cttgaaacttgaaatgaattttctttactttgtattgtcttcaaataacttctaagaaccactgaacttcaatcttcatatcctcaatcattcacttgat 17187328  T
Q  301 atcttgttttttcgatctacatgatttctcattaaaaagactcaacaactatggagttgcatgatttaggataaaagt 378  Q
     | || |||| ||||| |||||||||| ||| ||||||||||||||| ||||| ||||||||||||||||||||||||    
T  17187327 gtgttattttgtcgatttacatgatttatcactaaaaagactcaacacctatgaagttgcatgatttaggataaaagt 17187250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 349 - 486
Target Start/End: Complemental strand, 19601902 - 19601765
Alignment:
Q  349 ctatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagact 448  Q
    |||||||||||||||||||||||||||||| ||||||||  | | || | |||| |||| |||||||||||||||||| ||| |||||||| ||| ||||    
T  19601902 ctatggagttgcatgatttaggataaaagtgaattacaacaatttgaatgaaaaaaatagaaaaagttcctcaaaccaatgacaactcctctaattgact 19601803  T
Q  449 ttcaattttccttcaaatgcaaataattacactaaaaa 486  Q
    || ||||| |||| ||||||||| ||||||||||||||    
T  19601802 tttaatttgcctttaaatgcaaagaattacactaaaaa 19601765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 201 - 376
Target Start/End: Original strand, 31859760 - 31859938
Alignment:
Q  201 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaa-tatcattgaattttcgtcttcttatcctcgatccttcgtgtga 299  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| |||||||  | ||||||  ||   | ||| |||||||||||||||   ||     
T  31859760 ccttggaacttgaaataaattttcttcactttgtattgtcttcaaataccttctaagaaccattgatcttcaatattcatatcctcgatccttcacctgg 31859859  T
Q  300 tatcttgttttttcgatctacatgatttctcattaaaaagactc--aacaactatggagttgcatgatttaggataaaa 376  Q
    | |||||||||   ||| |||||||||||||| |||||||||||  |||| ||||| ||||||||||||||||||||||    
T  31859860 tgtcttgttttgctgatttacatgatttctcactaaaaagactcaaaacacctatgcagttgcatgatttaggataaaa 31859938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 201 - 521
Target Start/End: Complemental strand, 29437716 - 29437401
Alignment:
Q  201 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatcattgaattttcgtcttcttatcctcgatccttcgtgtgat 300  Q
    ||||||||||| ||||||| | ||||||||||||||||||||| || |||         ||||||| ||   ||||| |||||||||||||||  |||||    
T  29437716 ccttggaacttcaaatgaagtttcttcactttgtattgtcttctaagaac---------cattgaacttcaatcttcatatcctcgatccttcacgtgat 29437626  T
Q  301 atcttgttttttcgatctacatgatttctcattaaaaagactc--aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgatt- 397  Q
     |||||| ||  |||| ||||||||||||||||||||||||||  |||| ||||| |||||||||||||||||||||| | |||||| |  | |||| |     
T  29437625 gtcttgtcttgccgatttacatgatttctcattaaaaagactcaaaacagctatgaagttgcatgatttaggataaaactgaattacgaatactcgaatg 29437526  T
Q  398 -aaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaataattacactaaaaataaagctaaa 496  Q
     ||||| ||  |||||| |||||||||| ||||| ||||| || ||| || ||  ||||| ||||||||| |||| ||    |||||||| ||  | |||    
T  29437525 aaaaaaaaaatcaaaaaattcctcaaactattgacaactcatctaattgagttctaatttgccttcaaatacaaagaaaataactaaaaacaacccaaaa 29437426  T
Q  497 aatatcatatgttattccatcatca 521  Q
    || |||||||||||||  |||||||    
T  29437425 aacatcatatgttattatatcatca 29437401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 201 - 430
Target Start/End: Complemental strand, 23353873 - 23353646
Alignment:
Q  201 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatcattgaattttcgtcttcttatcctcgatccttcgtgtgat 300  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||| | ||||||  |  |||||  |||  ||||| |||||| | |||||| ||||||    
T  23353873 ccttggaacttgaaatgaattttcttcactttgtattgtcttaaaagaccttcta--actattgatctttaatcttcatatccttg-tccttcatgtgat 23353777  T
Q  301 atcttgttttttcgatctacatgatttctcattaaaaagactcaaca-act-atggagttgcatgatttaggataaaagtaaattacaatgaatcgatta 398  Q
     |||||||||  |||| |||||||||||||| ||||||||||||| | ||| ||| |  |||| ||||||  |||||| | |||||||| || |||| |     
T  23353776 gtcttgttttgccgatttacatgatttctcactaaaaagactcaaaacactcatgaatgtgcacgattta-tataaaattgaattacaacgactcgaatg 23353678  T
Q  399 aaaagaatacaaaaagttcctcaaaccattga 430  Q
    |||| |||||||||||||||| ||||||||||    
T  23353677 aaaacaatacaaaaagttccttaaaccattga 23353646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 273 - 427
Target Start/End: Complemental strand, 10576635 - 10576479
Alignment:
Q  273 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttagg 370  Q
    ||||| |||||||||||||||   |||| |||||||||| |||| ||||| |||||||| || ||||| ||||  || ||||| ||||| || ||||||     
T  10576635 tcttcatatcctcgatccttcacatgatgtcttgtttttccgatttacataatttctcactagaaagaatcaaaacacctatgaagttgtataatttaga 10576536  T
Q  371 ataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccat 427  Q
    |||||||| ||||||||||| |||| | |||| ||||||||| |||| |||||||||    
T  10576535 ataaaagtgaattacaatgactcgaatgaaaacaatacaaaatgttcttcaaaccat 10576479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 273 - 439
Target Start/End: Complemental strand, 9288392 - 9288224
Alignment:
Q  273 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaacaac--tatggagttgcatgatttagg 370  Q
    ||||| |||||| ||||||||   |||| |||||||||  |||| |||||||||||||| |||||||||| || ||   ||||||| | ||||||||| |    
T  9288392 tcttcatatccttgatccttcacttgatgtcttgttttgccgatttacatgatttctcactaaaaagactaaaaaaacatatggaggtacatgatttatg 9288293  T
Q  371 ataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    |||||| | ||||| ||||| || | | |||| |||||||   ||||||||||||||||||||||||||    
T  9288292 ataaaaatgaattataatgactcaaatgaaaacaatacaatttgttcctcaaaccattgaaaactcctc 9288224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 182 - 471
Target Start/End: Complemental strand, 21077507 - 21077215
Alignment:
Q  182 attctttcatcttttaatcccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatc-attgaattttcgtcttctta 280  Q
    |||||| ||||||| ||| ||||||||||||||||||||| | |||| |||||||||||||| | || ||||||| | | |||||  ||   || || ||    
T  21077507 attcttccatctttcaatgccttggaacttgaaatgaattttattcaatttgtattgtcttcgattaccttctaagaaccattgatattcaatcctcata 21077408  T
Q  281 tcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagt 378  Q
     | |||||||| |   || | |||||||||  | || |||||||||| ||| |||||||||  ||  || ||||||| ||  |||||||  ||||||| |    
T  21077407 acttcgatcctccacttggtgtcttgttttgccaatttacatgatttttcactaaaaagaccaaaaacacctatggaatttgatgatttgtgataaaatt 21077308  T
Q  379 aaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaa 471  Q
     || ||||| || |||| |||||| ||||||||| ||| ||||||||||||| |||||||| ||  |||||  ||||| ||||||||||||||    
T  21077307 gaactacaacgactcgaataaaaataatacaaaaggtttctcaaaccattgacaactcctctaaatgacttctaatttgccttcaaatgcaaa 21077215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 302 - 471
Target Start/End: Complemental strand, 21167883 - 21167711
Alignment:
Q  302 tcttgttttttc-gatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgatta 398  Q
    |||||||||||| ||| |||||||||||||| ||||||| |||||  || ||||| |||| |||  |||||||||||||||||||||||  | |||| |     
T  21167883 tcttgttttttccgatttacatgatttctcactaaaaagtctcaaaacacctatgaagttacatattttaggataaaagtaaattacaacaactcgaatg 21167784  T
Q  399 aaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaa 471  Q
    |||| ||||||||| |||||| ||| ||| || |||||||| ||  ||| |   |||||||||||||||||||    
T  21167783 aaaacaatacaaaatgttccttaaaacatggacaactcctctaaatgacgtcttattttccttcaaatgcaaa 21167711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 322 - 521
Target Start/End: Complemental strand, 22119779 - 22119578
Alignment:
Q  322 tgatttctcattaaaaagactcaacaa--ctatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcct 419  Q
    |||||||||| ||||||||||||| |   ||||| ||||||||||||| || ||||||||||||||||||| ||||   |||| | |||||   ||||||    
T  22119779 tgatttctcactaaaaagactcaaaatacctatgtagttgcatgattttgggtaaaagtaaattacaatgactcgaacgaaaacattacaatttgttcct 22119680  T
Q  420 caaaccattgaaaactcct-caaatagactttcaattttccttcaaatgcaaataattacactaaaaataaagctaaaaatatcatatgttattccatca 518  Q
    ||||||||||| |||||||  ||||| ||||  ||||| |||||||||||||| ||    |||||||| | |||  ||||||||||||| | ||| ||||    
T  22119679 caaaccattgacaactcctataaata-acttctaatttgccttcaaatgcaaagaaaataactaaaaacatagcataaaatatcatatgatgttctatca 22119581  T
Q  519 tca 521  Q
    |||    
T  22119580 tca 22119578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 205 - 439
Target Start/End: Original strand, 34864159 - 34864392
Alignment:
Q  205 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatc-attgaattttcgtcttcttatcctcgatccttcgtgtgatatc 303  Q
    ||||||| ||||||||| |||||| |||||||||||| |||| | ||||||| | | ||||| ||    ||| | |||| | ||||||||  ||||| ||    
T  34864159 ggaactttaaatgaattttcttcattttgtattgtctacaaaaaccttctaagaaccattgacttcaa-tctccatatctttgatccttcacgtgatgtc 34864257  T
Q  304 ttgttttttcgatctacatgatttctcatta-aaaagactcaacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaa 402  Q
    ||| ||| ||||| |||||||||||||| || |||| |||||| |   |||||||| ||| ||||||||||||||| |||||||||||  ||| | ||||    
T  34864258 ttgatttgtcgatttacatgatttctcactacaaaacactcaaaacacatggagtttcataatttaggataaaagtgaattacaatga--cgagtgaaaa 34864355  T
Q  403 gaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
     ||||  | | ||||||||||||||||| ||||||||    
T  34864356 caatatgatacgttcctcaaaccattgacaactcctc 34864392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 344 - 439
Target Start/End: Original strand, 1676301 - 1676396
Alignment:
Q  344 aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    |||||||||||||||||||||| |||||||||| | ||||||||  | |||| | |||| | ||||| | ||||||||||||||||| ||||||||    
T  1676301 aacaactatggagttgcatgatataggataaaattgaattacaaaaactcgaatgaaaacattacaatatgttcctcaaaccattgacaactcctc 1676396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 344 - 439
Target Start/End: Original strand, 1682829 - 1682924
Alignment:
Q  344 aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    |||||||||||||||||||||| |||||||||| | ||||||||  | |||| | |||| | ||||| | ||||||||||||||||| ||||||||    
T  1682829 aacaactatggagttgcatgatataggataaaattgaattacaaaaactcgaatgaaaacattacaatatgttcctcaaaccattgacaactcctc 1682924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 205 - 387
Target Start/End: Complemental strand, 15192454 - 15192269
Alignment:
Q  205 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatc-attgaattttcgtcttcttatcctcgatccttcgtgtgatatc 303  Q
    ||||||||||||||||| ||||||||||| |||||||||||  | ||||||| | | ||||  | |||   ||| |||||| ||||||||  ||||| ||    
T  15192454 ggaacttgaaatgaattgtcttcactttgaattgtcttcaacaaccttctaagaaccattgg-tcttcaatttcatatccttgatccttcacgtgatgtc 15192356  T
Q  304 ttgttttttcgatctacatgatttctcatta-aaaagactc--aacaactatggagttgcatgatttaggataaaagtaaattacaa 387  Q
    ||| ||| ||||| |||||||||||||| || |||| ||||  |||| |||||||| |||| ||| |||||||||||| ||||||||    
T  15192355 ttggtttgtcgatttacatgatttctcactacaaaacactcaaaacacctatggagctgcacgatctaggataaaagtgaattacaa 15192269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 286 - 439
Target Start/End: Original strand, 17339760 - 17339914
Alignment:
Q  286 gatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaatt 383  Q
    |||||||| |||||||||||| ||| ||||| |||| ||| ||||| |||||||  ||||  || ||||| | |||||||||||||||||||| | ||||    
T  17339760 gatccttcatgtgatatcttgctttgtcgat-tacacgatctctcactaaaaagcttcaaaacacctatgaaattgcatgatttaggataaaattgaatt 17339858  T
Q  384 acaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    |||| || | || | ||||  |||||||| ||||||||| |||| || ||||||||    
T  17339859 acaaagactagaatgaaaaagatacaaaatgttcctcaatccatggataactcctc 17339914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 279 - 439
Target Start/End: Original strand, 25315169 - 25315332
Alignment:
Q  279 tatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaag-actcaacaac--tatggagttgcatgatttaggataaa 375  Q
    |||||| |||||||| || ||| ||||| ||| ||||| ||||||||| |||| || |||  |||||| | |  |||||||||||||||| |||||||||    
T  25315169 tatccttgatccttcatgcgatgtcttgatttgtcgatttacatgattcctcactacaaattactcaaaacccatatggagttgcatgatctaggataaa 25315268  T
Q  376 agtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    | | |||||||| || || | | |||| ||||||| | |||||||||| |||||| ||||||||    
T  25315269 acttaattacaacgactcaagtgaaaacaatacaatatgttcctcaaagcattgacaactcctc 25315332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 349 - 439
Target Start/End: Original strand, 9782994 - 9783084
Alignment:
Q  349 ctatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    ||||||||||||||||| ||  |||||| | ||||||||||||| || | |||| ||||||| | ||||||||||| ||||| ||||||||    
T  9782994 ctatggagttgcatgatctaaaataaaactgaattacaatgaattgagtgaaaacaatacaatatgttcctcaaactattgacaactcctc 9783084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 297 - 436
Target Start/End: Complemental strand, 26159914 - 26159773
Alignment:
Q  297 tgatatcttgttttttcgatctacatgatttctcattaaaaagactc--aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcg 394  Q
    |||| |||||||||   |||||||||||||| ||| |||||||||||  ||||  |||| ||||| || |||||||| |||| |||||||||| || |||    
T  26159914 tgatgtcttgttttgctgatctacatgatttttcactaaaaagactcaaaacacatatgaagttggataatttaggacaaaactaaattacaacgactcg 26159815  T
Q  395 attaaaaagaatacaaaaagttcctcaaaccattgaaaactc 436  Q
    | | |||| ||||||||| ||| || |||| ||||| |||||    
T  26159814 aatgaaaacaatacaaaatgtttcttaaactattgacaactc 26159773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 355 - 435
Target Start/End: Complemental strand, 27302876 - 27302796
Alignment:
Q  355 agttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaact 435  Q
    ||||||||||| ||| ||| || | ||||||||||| |||| | |||| ||||||||| ||||||||||||||||| ||||    
T  27302876 agttgcatgatctagtatataattgaattacaatgactcgagtgaaaacaatacaaaatgttcctcaaaccattgacaact 27302796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 296 - 435
Target Start/End: Complemental strand, 46647354 - 46647214
Alignment:
Q  296 gtgatatcttgttttttcgatctacatgatttctcattaaaaaga-ctcaacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcg 394  Q
    ||||| |||||||||   ||| || ||||||||||  |||||| | |||||||  ||||||||||||||||||||||||||||| |||||||  || | |    
T  46647354 gtgatgtcttgttttgctgatttatatgatttctcgataaaaataactcaacacttatggagttgcatgatttaggataaaagtgaattacaccgactag 46647255  T
Q  395 attaaaaagaatacaaaaagttcctcaaaccattgaaaact 435  Q
    | | |||| |||||||||  ||| | |||||||||| ||||    
T  46647254 aatgaaaacaatacaaaatattcttgaaaccattgacaact 46647214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 344 - 410
Target Start/End: Original strand, 10320225 - 10320291
Alignment:
Q  344 aacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaa 410  Q
    |||| ||||||||||||||| | |||||||||||| |||||||| || |||| | ||||||||||||    
T  10320225 aacacctatggagttgcatggtctaggataaaagtgaattacaacgactcgagtgaaaagaatacaa 10320291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 387
Target Start/End: Original strand, 17026560 - 17026745
Alignment:
Q  205 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatcattgaattttcgtcttcttatcctcgatccttcgtgtgatatct 304  Q
    |||||||||||| |||| |||||||||||||||||||||||| |  || ||| | |  | || ||   |  || ||| || |||||||| |||||| |||    
T  17026560 ggaacttgaaattaattttcttcactttgtattgtcttcaaaaactttttaagaaccattaacttaaattctcatatacttgatccttcatgtgatgtct 17026659  T
Q  305 tgttttttcgatctacatgatttctcatta-aaaagactc--aacaactatggagttgcatgatttaggataaaagtaaattacaa 387  Q
    |  ||| ||||| |||||||||| | | || |||| ||||  |||| ||||||||||||||||| |||||||||||| ||||||||    
T  17026660 taatttgtcgatttacatgatttatgactacaaaacactcaaaacacctatggagttgcatgatctaggataaaagtgaattacaa 17026745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 205 - 245
Target Start/End: Original strand, 1695710 - 1695750
Alignment:
Q  205 ggaacttgaaatgaattatcttcactttgtattgtcttcaa 245  Q
    ||||||||||||||||| | |||||||||||||||||||||    
T  1695710 ggaacttgaaatgaattttattcactttgtattgtcttcaa 1695750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 387
Target Start/End: Original strand, 1673826 - 1673869
Alignment:
Q  344 aacaactatggagttgcatgatttaggataaaagtaaattacaa 387  Q
    |||||||||||||||||||||| |||||||||| | ||||||||    
T  1673826 aacaactatggagttgcatgatataggataaaattgaattacaa 1673869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 426
Target Start/End: Original strand, 1695856 - 1695935
Alignment:
Q  347 aactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaacca 426  Q
    ||||||||||||||||||| |||||||||| | |||||||| || || | |||||  ||||||| | |||||| ||||||    
T  1695856 aactatggagttgcatgatctaggataaaattgaattacaaagactcaaataaaaccaatacaatatgttcctgaaacca 1695935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 256
Target Start/End: Complemental strand, 33519285 - 33519230
Alignment:
Q  201 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaa 256  Q
    |||||||| |||||||||||| ||||||  |||||||||||||||| | |||||||    
T  33519285 ccttggaatttgaaatgaattttcttcaacttgtattgtcttcaaagaccttctaa 33519230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 439
Target Start/End: Original strand, 12111360 - 12111433
Alignment:
Q  367 taggataaaagtaaattacaatgaatcgatt-aaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    |||||||||||| |||||||| || |||  | ||||| ||||||| | ||||||||||||||||| ||||||||    
T  12111360 taggataaaagtgaattacaacgactcgtgtgaaaaaaaatacaatatgttcctcaaaccattgacaactcctc 12111433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 426
Target Start/End: Complemental strand, 18444354 - 18444277
Alignment:
Q  349 ctatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaacca 426  Q
    |||||||||||| ||||||||||||||| | |||||||  |  |||| | |||| | |||||| ||||||||||||||    
T  18444354 ctatggagttgcgtgatttaggataaaactgaattacagcggctcgaatgaaaacattacaaagagttcctcaaacca 18444277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 246
Target Start/End: Complemental strand, 18898233 - 18898192
Alignment:
Q  205 ggaacttgaaatgaattatcttcactttgtattgtcttcaaa 246  Q
    ||||||||||||||||| |||| |||||||||||| ||||||    
T  18898233 ggaacttgaaatgaattttctttactttgtattgtattcaaa 18898192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 202 - 246
Target Start/End: Complemental strand, 19602052 - 19602008
Alignment:
Q  202 cttggaacttgaaatgaattatcttcactttgtattgtcttcaaa 246  Q
    |||||||| ||||||||||| ||| |||||| |||||||||||||    
T  19602052 cttggaacatgaaatgaattttctccactttttattgtcttcaaa 19602008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 318 - 412
Target Start/End: Complemental strand, 20044315 - 20044219
Alignment:
Q  318 tacatgatttctcattaaaaagactcaaca-ac-tatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaa 412  Q
    |||||||||| ||| ||||||||||||| | || ||||||||||||||||| ||||  ||| | ||||||||||| |||| | |||| |||| ||||    
T  20044315 tacatgatttttcaataaaaagactcaaaatacatatggagttgcatgattaaggaagaaattgaattacaatgactcgaatgaaaacaatataaaa 20044219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 319 - 376
Target Start/End: Complemental strand, 33519166 - 33519107
Alignment:
Q  319 acatgatttctcattaaaaagactc--aacaactatggagttgcatgatttaggataaaa 376  Q
    ||||||||||||| |||||||||||  |||| ||| | |||||||||||||| |||||||    
T  33519166 acatgatttctcactaaaaagactcaaaacacctacgaagttgcatgatttaagataaaa 33519107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 51884853 - 51884813
Alignment:
Q  205 ggaacttgaaatgaattatcttcactttgtattgtcttcaa 245  Q
    |||||||||||| |||| ||||||||||||||||| |||||    
T  51884853 ggaacttgaaattaattttcttcactttgtattgtattcaa 51884813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 68; Significance: 5e-30; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 399 - 522
Target Start/End: Complemental strand, 12156 - 12033
Alignment:
Q  399 aaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaataattacactaaaaataaagctaaaaa 498  Q
    |||| ||||||||||||||||||||| ||||| || ||||| |||||||||  ||||| ||||||||||||||||||||||||||||| | ||||||| |    
T  12156 aaaacaatacaaaaagttcctcaaactattgacaattcctctaatagacttctaatttaccttcaaatgcaaataattacactaaaaacatagctaaaga 12057  T
Q  499 tatcatatgttattccatcatcaa 522  Q
     ||||||||||| ||||| |||||    
T  12056 catcatatgttaatccattatcaa 12033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 166 - 369
Target Start/End: Complemental strand, 12534 - 12328
Alignment:
Q  166 cgaccctttttcggccattctttcatcttttaatcccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaa-tatcattg 264  Q
    |||||||||||||||| ||||| |||||| | |  |||||||||||||||| |||| ||||||||||||||| |||||| | |||||||||  | |||||    
T  12534 cgaccctttttcggcccttcttccatcttgtgacgccttggaacttgaaataaattttcttcactttgtattttcttcataaaacttctaacaaccattg 12435  T
Q  265 aattttcg-tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcatta-aaaagactc--aacaactatggagttgc 360  Q
      | |||| ||||| |||| || |||||||  ||||| ||||| ||| ||||| |||||||||||||| || |||| ||||  |||| ||||||||||||    
T  12434 --tcttcgatcttcatatcgtcaatccttcacgtgatgtcttgatttgtcgatttacatgatttctcactacaaaacactcaaaacacctatggagttgc 12337  T
Q  361 atgatttag 369  Q
    |||||||||    
T  12336 atgatttag 12328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 65; Significance: 3e-28; HSPs: 2)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 399 - 515
Target Start/End: Complemental strand, 1720 - 1604
Alignment:
Q  399 aaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaataattacactaaaaataaagctaaaaa 498  Q
    |||| ||||||||||||||||||||| ||||| || ||||| |||||||||  ||||| ||||||||||||||||||||||||||||| | ||||||| |    
T  1720 aaaacaatacaaaaagttcctcaaactattgacaattcctctaatagacttctaatttaccttcaaatgcaaataattacactaaaaacatagctaaaga 1621  T
Q  499 tatcatatgttattcca 515  Q
     ||||||||||| ||||    
T  1620 catcatatgttaatcca 1604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 166 - 256
Target Start/End: Complemental strand, 2098 - 2008
Alignment:
Q  166 cgaccctttttcggccattctttcatcttttaatcccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaa 256  Q
    |||||||||||||||| ||||| |||||| | |  |||||||||||||||| |||| ||||||||||||||| |||||| | |||||||||    
T  2098 cgaccctttttcggcccttcttccatcttgtgacgccttggaacttgaaataaattttcttcactttgtattttcttcataaaacttctaa 2008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 3e-28; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 399 - 515
Target Start/End: Original strand, 24507645 - 24507761
Alignment:
Q  399 aaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaataattacactaaaaataaagctaaaaa 498  Q
    |||| ||||||||||||||||||||| ||||| || ||||| |||||||||  ||||| ||||||||||||||||||||||||||||| | ||||||| |    
T  24507645 aaaacaatacaaaaagttcctcaaactattgacaattcctctaatagacttctaatttaccttcaaatgcaaataattacactaaaaacatagctaaaga 24507744  T
Q  499 tatcatatgttattcca 515  Q
     ||||||||||| ||||    
T  24507745 catcatatgttaatcca 24507761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 205 - 430
Target Start/End: Original strand, 17860312 - 17860540
Alignment:
Q  205 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatc-attgaattttcgtcttcttatcctcgatccttcgtgtgatatc 303  Q
    ||||||||||||||||| ||||||||||||||||||| |||| | ||||||| | | ||||   ||   | ||||||| ||  |||||||  ||||| ||    
T  17860312 ggaacttgaaatgaattttcttcactttgtattgtctacaaaaaccttctaagaaccattgtccttcaat-ttcttatactttatccttcacgtgatgtc 17860410  T
Q  304 ttgttttttcgatctacatgatttctcatta-aaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaa 400  Q
     || ||| | ||  |||||||||||||| || |||| ||||||  ||  ||||||||||||||||||| ||||||||||||| ||||||| |||| | ||    
T  17860411 ctgatttgttgaattacatgatttctcactacaaaacactcaaagcacgtatggagttgcatgatttaagataaaagtaaatgacaatgactcgagtgaa 17860510  T
Q  401 aagaatacaaaaagttcctcaaaccattga 430  Q
    || ||||||||| |||||||||||||||||    
T  17860511 aataatacaaaatgttcctcaaaccattga 17860540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 201 - 376
Target Start/End: Original strand, 26499706 - 26499884
Alignment:
Q  201 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaa-tatcattgaattttcgtcttcttatcctcgatccttcgtgtga 299  Q
    ||||| ||||||||||||||| |||| ||||||||||||||||||| | |||||||  | ||||||  ||   ||||| ||||||||||| |||  |||     
T  26499706 ccttgaaacttgaaatgaattttctttactttgtattgtcttcaaaaaccttctaagaaccattgatcttcaatcttcatatcctcgatctttcacgtgg 26499805  T
Q  300 tatcttgttttttcgatctacatgatttctcattaaaaagactc--aacaactatggagttgcatgatttaggataaaa 376  Q
    |||||||||||  |||| | |||||||||||| |||||| ||||  |||| ||||| | || |||||||||||||||||    
T  26499806 tatcttgttttgccgatttgcatgatttctcactaaaaacactcataacacctatgaaattacatgatttaggataaaa 26499884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 302 - 387
Target Start/End: Original strand, 9943111 - 9943198
Alignment:
Q  302 tcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaa 387  Q
    |||||||||| |||| |||||||||||||| |||||| ||| ||  || |||||||||||||||||||||||||||||| ||||||||    
T  9943111 tcttgtttttccgatttacatgatttctcaataaaaatactaaaaacacctatggagttgcatgatttaggataaaagtgaattacaa 9943198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 439
Target Start/End: Original strand, 26512755 - 26512878
Alignment:
Q  318 tacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagt 415  Q
    |||||||||||||| ||  |||||||||  || |||| | |||||||||| |||| ||||||| |||||||| ||||||| | |||| ||||||||| ||    
T  26512755 tacatgatttctcactaggaagactcaaaacagctatcgggttgcatgatctaggttaaaagtgaattacaacgaatcgaatgaaaacaatacaaaatgt 26512854  T
Q  416 tcctcaaaccattgaaaactcctc 439  Q
    | | ||||||||||| ||||||||    
T  26512855 tacacaaaccattgacaactcctc 26512878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 439
Target Start/End: Original strand, 26517871 - 26517994
Alignment:
Q  318 tacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagt 415  Q
    |||||||||||||| ||  |||||||||  || |||| | |||||||||| |||| ||||||| |||||||| ||||||| | |||| ||||||||| ||    
T  26517871 tacatgatttctcactaggaagactcaaaacagctatcgggttgcatgatctaggttaaaagtgaattacaacgaatcgaatgaaaacaatacaaaatgt 26517970  T
Q  416 tcctcaaaccattgaaaactcctc 439  Q
    | | ||||||||||| ||||||||    
T  26517971 tacacaaaccattgacaactcctc 26517994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 166 - 256
Target Start/End: Original strand, 24507267 - 24507357
Alignment:
Q  166 cgaccctttttcggccattctttcatcttttaatcccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaa 256  Q
    |||||||||||||||| |||||  ||||| | |  |||||||||||||||| |||| ||||||||||||||| |||||| | |||||||||    
T  24507267 cgaccctttttcggcccttcttctatcttgtgacgccttggaacttgaaataaattttcttcactttgtattttcttcataaaacttctaa 24507357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 15575175 - 15575135
Alignment:
Q  205 ggaacttgaaatgaattatcttcactttgtattgtcttcaa 245  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  15575175 ggaacttgaaatgaattttcttcactttgtattgtcttcaa 15575135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 430
Target Start/End: Complemental strand, 16439616 - 16439482
Alignment:
Q  297 tgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcg 394  Q
    |||| ||||||||||  ||| |||||||||||||| |||||||||||||  ||  | || |||||||| ||||||||||||||| ||||| || || ||     
T  16439616 tgatgtcttgtttttctgatttacatgatttctcactaaaaagactcaaaacacatgtgaagttgcattatttaggataaaagttaattataacgactc- 16439518  T
Q  395 attaaaaagaatacaaaaagttcctcaaaccattga 430  Q
    | |||||| ||||||||  || |||||||| |||||    
T  16439517 aataaaaacaatacaaattgtccctcaaactattga 16439482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 295 - 439
Target Start/End: Original strand, 14768223 - 14768369
Alignment:
Q  295 tgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaat 392  Q
    |||||| |||||||||  |||| ||||||||||||   | |||||||||||  ||  |||| | ||||||| ||||| ||||| || ||||||||| | |    
T  14768223 tgtgatgtcttgttttgccgatttacatgatttctatctgaaaagactcaaaacatttatgaaattgcatgttttagaataaatgtgaattacaataact 14768322  T
Q  393 cgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    ||| | |||  |||||||||| |||||||||||| ||| ||||||||    
T  14768323 cgaatgaaaccaatacaaaaaattcctcaaaccaatgacaactcctc 14768369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 439
Target Start/End: Original strand, 32930412 - 32930573
Alignment:
Q  280 atcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactc--aacaactatggagttgcatgatttaggataaaag 377  Q
    ||||| |||||| | |||||| |||||||||  | || |||||||||||||| |||||||||||  |||| ||||  | ||||||| || ||||||||||    
T  32930412 atccttgatcctccatgtgatgtcttgttttgccaatttacatgatttctcactaaaaagactcaaaacatctatcaaattgcatgtttaaggataaaag 32930511  T
Q  378 taaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    | ||||| || || ||   |  ||| || |||||| ||||| ||||||||||| ||||||||    
T  32930512 tgaattaaaacgactcttatggaaacaaaacaaaatgttccgcaaaccattgacaactcctc 32930573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 273 - 375
Target Start/End: Original strand, 9396539 - 9396642
Alignment:
Q  273 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactc--aacaactatggagttgcatgatttagg 370  Q
    ||||||| |||| ||||||||  ||||| |||||||||  |||| || ||||||||||| |||||||||||  ||||  |||| |||||||||||||||     
T  9396539 tcttcttgtccttgatccttcacgtgatgtcttgttttgccgattta-atgatttctcactaaaaagactcaaaacacatatgaagttgcatgatttaga 9396637  T
Q  371 ataaa 375  Q
    |||||    
T  9396638 ataaa 9396642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 354 - 439
Target Start/End: Original strand, 13759467 - 13759552
Alignment:
Q  354 gagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    |||||||||||| ||| |||||| | |||||||| || |||| | |||| ||| ||| | ||||||||||||||||| ||||||||    
T  13759467 gagttgcatgatatagaataaaattgaattacaacgattcgagtgaaaacaattcaatatgttcctcaaaccattgacaactcctc 13759552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 316
Target Start/End: Complemental strand, 30355567 - 30355456
Alignment:
Q  206 gaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatc-attgaattttcgtcttcttatcctcgatccttcgtgtgatatct 304  Q
    |||||||||||||||| | |||||||| ||||||||||||| | ||||||| | | |||||  ||   ||||| ||||||||||||||| |||||  |||    
T  30355567 gaacttgaaatgaattttattcactttttattgtcttcaaaaaccttctaagaacgattgatcttcaatcttcatatcctcgatccttcatgtgaggtct 30355468  T
Q  305 tgttttttcgat 316  Q
    || ||| |||||    
T  30355467 tggtttgtcgat 30355456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 387
Target Start/End: Original strand, 12972317 - 12972433
Alignment:
Q  273 tcttcttatcctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttagg 370  Q
    ||||| |||| |||||| |||  || || ||||| ||||  ||| |||||||||||||  |||||||||||||  ||  |||| ||||||||||||||||    
T  12972317 tcttcatatcatcgatctttcacgttatgtcttggttttctgatttacatgatttctccctaaaaagactcaaaacacgtatgaagttgcatgatttagg 12972416  T
Q  371 ataaaagtaaattacaa 387  Q
    ||| || | ||||||||    
T  12972417 atacaactgaattacaa 12972433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 435
Target Start/End: Original strand, 20495806 - 20495890
Alignment:
Q  350 tatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaact 435  Q
    |||| |||||||| ||||| ||||||| | |||||||| || || | |||||| ||| ||||| ||||||||||||||||| ||||    
T  20495806 tatgaagttgcataatttaagataaaattgaattacaacgactcaaataaaaacaat-caaaatgttcctcaaaccattgataact 20495890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 159 - 255
Target Start/End: Original strand, 14768093 - 14768189
Alignment:
Q  159 cagcttacgaccctttttcggccattctttcatcttttaatcccttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttcta 255  Q
    |||||| | ||||||||||| || ||||| |||| | | || ||||| ||||| ||||  ||| ||||| |||| ||||||||||||||| ||||||    
T  14768093 cagctttccaccctttttcgtccgttcttccatcctgtgatgccttgtaacttaaaatctattttcttcgctttctattgtcttcaaataccttcta 14768189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 205 - 241
Target Start/End: Complemental strand, 15998761 - 15998725
Alignment:
Q  205 ggaacttgaaatgaattatcttcactttgtattgtct 241  Q
    |||||||||||||||||  ||||||||||||||||||    
T  15998761 ggaacttgaaatgaatttgcttcactttgtattgtct 15998725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 303 - 376
Target Start/End: Original strand, 22559176 - 22559250
Alignment:
Q  303 cttgttttttcgatctacatgatttctcattaaaaagactc--aacaactatggagttgcatgatttaggataaaa 376  Q
    |||||||||||||| |||||||||||||| | ||||||| |  |||| ||||| ||||||||||||| ||| ||||    
T  22559176 cttgttttttcgatttacatgatttctcact-aaaagacccaaaacacctatgaagttgcatgatttgggaaaaaa 22559250  T

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Target: scaffold0190 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 208 - 521
Target Start/End: Original strand, 11564 - 11880
Alignment:
Q  208 acttgaaatgaattatcttcactttgtattgtcttcaaataacttctaata-tcattgaattttcgtcttcttatcctcgatccttcgtgtgatatcttg 306  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| ||| | |||||||  ||   |||||  || ||| ||||||    |||| |||||    
T  11564 acttgaaatgaattttcttcactttgtattgtcttcaaataccttataagaatcattgatattcaatcttcaaattctcaatccttaacttgatgtcttg 11663  T
Q  307 ttttttcgatctacatgatttctcattaaaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaaga 404  Q
    |||| ||||| |||||||||||  |   |||||||||||  || | ||| ||||||||||||||||| |||| | |||||||| || || | | ||||      
T  11664 ttttgtcgatttacatgatttcgtacggaaaagactcaaaacacccatgtagttgcatgatttaggacaaaactgaattacaacgattcaaatgaaaact 11763  T
Q  405 atacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaataattacactaaaaataaagctaaaaatatcat 504  Q
    ||||||||||||| ||||| |||||| |||||||| ||  |||||  | ||| |||||||||||||||||    |||||||| | |||  ||||||||||    
T  11764 atacaaaaagttcatcaaatcattgacaactcctctaaatgacttctattttgccttcaaatgcaaataaaataactaaaaacatagcctaaaatatcat 11863  T
Q  505 atgttattccatcatca 521  Q
    ||| | ||| |||||||    
T  11864 atgatgttcaatcatca 11880  T

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Target: scaffold0185 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 282 - 439
Target Start/End: Complemental strand, 1616 - 1457
Alignment:
Q  282 cctcgatccttcgtgtgatatcttgttttttcgatctacatgatttctcattaaaaagactc--aacaactatggagttgcatgatttaggataaaagta 379  Q
    |||||||| ||| |||||| || ||||||| |||| |||||||||| |||| ||||||||||  |||| || | ||||||||||||| | |||||||||     
T  1616 cctcgatctttcatgtgatttcatgtttttccgatttacatgatttttcataaaaaagactcgaaacatcttttgagttgcatgattaatgataaaagtg 1517  T
Q  380 aattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctc 439  Q
    ||||| |||||||||| | |||| ||||||||| | ||||||||  ||||| ||||||||    
T  1516 aattaaaatgaatcgaatgaaaacaatacaaaatgctcctcaaaatattgacaactcctc 1457  T

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Target: scaffold0185; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 2754 - 2709
Alignment:
Q  202 cttggaacttgaaatgaattatcttcactttgtattgtcttcaaat 247  Q
    |||||||| |||||||| || |||||||| ||||||||||||||||    
T  2754 cttggaacatgaaatgagttttcttcactctgtattgtcttcaaat 2709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 273 - 510
Target Start/End: Complemental strand, 58928 - 58688
Alignment:
Q  273 tcttcttatcctcgatccttcgtgtgatatcttgttttttcga-tctacatgatttctcattaaaaagactc-aacaac-tatggagttgcatgatttag 369  Q
    ||||| ||| ||||||||||| |||||| || ||||||  | | | |||||||||||||| ||||||||||  || ||| ||  ||||||||||||| ||    
T  58928 tcttcatattctcgatccttcatgtgatgtcctgttttacccaatttacatgatttctcactaaaaagacttgaaaaacataaagagttgcatgattcag 58829  T
Q  370 gataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgca 469  Q
    ||||||  |  ||||||||||  ||| | |||| ||||||||||||||||||||||||||| ||||||||  || |||||  ||||| ||||||||||||    
T  58828 gataaacctggattacaatgacccgaatgaaaacaatacaaaaagttcctcaaaccattgacaactcctctgattgacttctaatttgccttcaaatgca 58729  T
Q  470 aataattacactaaaaataaagctaaaaatatcatatgtta 510  Q
     | ||    || ||||| | ||||||||| |||||||||||    
T  58728 tagaaaataaccaaaaacatagctaaaaacatcatatgtta 58688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 183 - 248
Target Start/End: Complemental strand, 59022 - 58958
Alignment:
Q  183 ttctttcatcttttaatcccttggaacttgaaatgaattatcttcactttgtattgtcttcaaata 248  Q
    ||||||| |||| | || ||||||||||| ||||||||| |||||| |||| ||||||||||||||    
T  59022 ttctttcgtcttgtgataccttggaactttaaatgaatt-tcttcattttgcattgtcttcaaata 58958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 207 - 425
Target Start/End: Complemental strand, 21647 - 21425
Alignment:
Q  207 aacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatc-attgaattttcgtcttcttatcctcgatccttcgtgtgatatctt 305  Q
    ||||||||||||||  |||| ||||||||||||||| ||| | ||||||| | | |||||  ||   ||||| |||| | |||||||| ||| || ||||    
T  21647 aacttgaaatgaatattcttaactttgtattgtctttaaaaaccttctaagaaccattgatcttcaatcttcatatcattgatccttcatgtaatgtctt 21548  T
Q  306 gttttttcgatctacatgatttctcatta-aaaagactcaa--caactatggagttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaa 402  Q
    | ||| ||||| ||||||||| |||| |  |||| || |||  ||| |||| |||||||||||||||||||||||| |||||||| || |||| | ||||    
T  21547 ggtttgtcgatttacatgattcctcactgcaaaacacccaaaacaattatgaagttgcatgatttaggataaaagtgaattacaacgactcgagtgaaaa 21448  T
Q  403 gaatacaaaaagttcctcaaacc 425  Q
     ||||||| ||||||||||||||    
T  21447 caatacaataagttcctcaaacc 21425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 367 - 436
Target Start/End: Complemental strand, 6282 - 6213
Alignment:
Q  367 taggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactc 436  Q
    |||||||||||||||||||||||| | || | |||| ||||||  | |||||||||||||||||||||||    
T  6282 taggataaaagtaaattacaatgacttgagtgaaaataatacattatgttcctcaaaccattgaaaactc 6213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 202 - 449
Target Start/End: Original strand, 228047 - 228295
Alignment:
Q  202 cttggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaa-tatcattgaattttc-gtcttcttatcctcgatccttcgtgtga 299  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| |||||||  | |||||  | |||  | ||| ||  |||||||||||  ||||    
T  228047 cttggaacttgaaatgaattttcttcactttgtattgtcttcaaataccttctaagaaccattg--tcttcaatattcatacactcgatccttcacgtga 228144  T
Q  300 tatcttgttttttcgatctacatgatttctcatta-aaaagactcaacaactatggagttgcatgatttaggataaaagtaaattacaatgaatcgatta 398  Q
    | ||||| ||| ||||| |||||||||||||| || |||| |  |||||  | | | ||||||||||||| ||||||| | |||||||| || |||| |     
T  228145 tgtcttgatttgtcgatttacatgatttctcactataaaacatacaacacttttagggttgcatgatttatgataaaaatgaattacaacgactcgaatg 228244  T
Q  399 aaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactt 449  Q
    |||| |||  |||| ||||| |||| || |||||||||||| ||| |||||    
T  228245 aaaacaatttaaaatgttccacaaatcaatgaaaactcctctaattgactt 228295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 206 - 390
Target Start/End: Original strand, 26819 - 27007
Alignment:
Q  206 gaacttgaaatgaattatcttcactttgtattgtcttcaaataacttctaatatc-attgaattttcgtcttcttatcctcgatccttcgtgtgatatct 304  Q
    |||||||||| ||||| |||||||||||||||||||||||  |  |||||| | | |||||| ||   | ||| |||||| |||| |||  ||||| |||    
T  26819 gaacttgaaacgaattttcttcactttgtattgtcttcaagaactttctaagaaccattgaacttcaattttcatatccttgatctttcacgtgatgtct 26918  T
Q  305 tgttttttcgatctacatgatttctcatta-aaaagactc--aacaactatggagttgcatgatttaggataaaagtaaattacaatga 390  Q
    |  ||| ||||| |||||||||||||| ||  ||| ||||  |||| ||||| ||||| ||||||||||||||||||||||||||||||    
T  26919 taatttgtcgatttacatgatttctcactactaaacactcaaaacacctatgtagttgtatgatttaggataaaagtaaattacaatga 27007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1149 (Bit Score: 36; Significance: 0.00000000006; HSPs: 2)
Name: scaffold1149
Description:

Target: scaffold1149; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 203 - 246
Target Start/End: Complemental strand, 2040 - 1997
Alignment:
Q  203 ttggaacttgaaatgaattatcttcactttgtattgtcttcaaa 246  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  2040 ttggaacttgaaatgaattttctttactttgtattgtcttcaaa 1997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1149; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 516
Target Start/End: Complemental strand, 1839 - 1723
Alignment:
Q  399 aaaagaatacaaaaagttcctcaaaccattgaaaactcctcaaatagactttcaattttccttcaaatgcaaataattacactaaaaataaagctaaaaa 498  Q
    |||| ||||||||| |||| |||||||| ||| || ||||  ||| |||||  ||| |||||||||||||||| |||||  ||||||| | ||   ||||    
T  1839 aaaacaatacaaaaggttcttcaaaccaatgacaaatcctataattgacttctaatattccttcaaatgcaaagaattaggctaaaaacatag-gcaaaa 1741  T
Q  499 tatcatatgttattccat 516  Q
     |||||||||||||||||    
T  1740 catcatatgttattccat 1723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1026 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold1026
Description:

Target: scaffold1026; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 355 - 436
Target Start/End: Original strand, 1850 - 1931
Alignment:
Q  355 agttgcatgatttaggataaaagtaaattacaatgaatcgattaaaaagaatacaaaaagttcctcaaaccattgaaaactc 436  Q
    |||||||| ||||||||||||| || |||||||||| | || | |||| |||||||||| ||||| ||| |||||| |||||    
T  1850 agttgcataatttaggataaaactagattacaatgactagaatgaaaacaatacaaaaatttccttaaatcattgacaactc 1931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 286 - 383
Target Start/End: Original strand, 13016 - 13116
Alignment:
Q  286 gatccttcgtgtgatatcttgttttttcgatctacatgatttctcatta-aaaagactcaa--caactatggagttgcatgatttaggataaaagtaaat 382  Q
    |||||||| |||||| ||||| ||| ||||| ||||||||| |||| || |||| ||||||  || || ||||||||||| ||||||||||||||| |||    
T  13016 gatccttcatgtgatgtcttgatttgtcgatttacatgattcctcactacaaaacactcaaaacacctgtggagttgcataatttaggataaaagtgaat 13115  T
Q  383 t 383  Q
    |    
T  13116 t 13116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0836 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0836
Description:

Target: scaffold0836; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 201 - 247
Target Start/End: Complemental strand, 2863 - 2817
Alignment:
Q  201 ccttggaacttgaaatgaattatcttcactttgtattgtcttcaaat 247  Q
    ||||||| ||| ||||||||| |||||||||||||||||| ||||||    
T  2863 ccttggatctttaaatgaattttcttcactttgtattgtcatcaaat 2817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 22477 - 22527
Alignment:
Q  205 ggaacttgaaatgaattatcttcactttgtattgtcttcaaataacttcta 255  Q
    ||||||||||||||||| ||||||| |||||||||||| ||| | ||||||    
T  22477 ggaacttgaaatgaattttcttcaccttgtattgtcttaaaaaaccttcta 22527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 7870 - 7830
Alignment:
Q  205 ggaacttgaaatgaattatcttcactttgtattgtcttcaa 245  Q
    ||||||||||||||||| |||| |||||||| |||||||||    
T  7870 ggaacttgaaatgaattttcttgactttgtactgtcttcaa 7830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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