View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11737A_low_69 (Length: 417)
Name: NF11737A_low_69
Description: NF11737A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11737A_low_69 |
 | |
|
| [»] chr8 (4 HSPs) |
| |
|
| [»] scaffold0001 (1 HSPs) |
| |
|
| [»] chr4 (1 HSPs) |
| |
|
| [»] scaffold0196 (1 HSPs) |
| |
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| [»] chr5 (3 HSPs) |
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|
Alignment Details
Target: chr8 (Bit Score: 394; Significance: 0; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 394; E-Value: 0
Query Start/End: Original strand, 16 - 417
Target Start/End: Original strand, 27962582 - 27962983
Alignment:
| Q |
16 |
ggacatcattccggttgtgtggcagccccctaccatcccttgggtcaaggccaacacagatgggtcggttcaaaatttaatggctgcttgtggtggtgtc |
115 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27962582 |
ggacatcattccgattgtgtggcagccccctaccatcccttgggtcaaggccaacacagatgggtcggttcaaaatttaatggctgcttgtggtggtgtc |
27962681 |
T |
|
| Q |
116 |
ttccgcgactctagcggaacttttcttggtggattcgcaagcaatcttgacatagtttctgtcttccaagcagaaatcgtgggcctcattttgtctacgg |
215 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27962682 |
ttccgcgactctagcggaacttttcttggtggattcgcaagcaatcttggcatagtttctgtcttccaagcagaaatcgtgggcctcattttgtctacgg |
27962781 |
T |
|
| Q |
216 |
aatatgcaagttcaaacagctggactcgtttgtggcttgaaagcgattcttctagtgcggtacaagctttccataaaccatctcttattctggttggtct |
315 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27962782 |
aatatgcaagttcaaacagctggactcgtttgtggcttgaaagcgattcttctagtgcggtacaagctttccataaaccatctcttattctggttggtct |
27962881 |
T |
|
| Q |
316 |
tcgcaaccgttggcataattgtactcacaatggtctctttattatttgcttccacgtcttccgagaaggcaatgtttgcgcggatggcctcgccgctttg |
415 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27962882 |
tcgcaaccgttggcataattgtactcacaatggtctctttattatttgcttccacgtcttccgagaaggcaatgtttgcgcggatggcctcgccgctttg |
27962981 |
T |
|
| Q |
416 |
gg |
417 |
Q |
| |
|
|| |
|
|
| T |
27962982 |
gg |
27962983 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 390; E-Value: 0
Query Start/End: Original strand, 16 - 417
Target Start/End: Original strand, 27916163 - 27916564
Alignment:
| Q |
16 |
ggacatcattccggttgtgtggcagccccctaccatcccttgggtcaaggccaacacagatgggtcggttcaaaatttaatggctgcttgtggtggtgtc |
115 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27916163 |
ggacatcattccgattgtgtggcagccccctaccatcccttgggtcaaggccaacacagatgggtcggttcaaaatttaatggctgcttgtggtggtgtc |
27916262 |
T |
|
| Q |
116 |
ttccgcgactctagcggaacttttcttggtggattcgcaagcaatcttgacatagtttctgtcttccaagcagaaatcgtgggcctcattttgtctacgg |
215 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27916263 |
ttccgcgactctagcggaacttttcttggtggattcgcaagcaatcttggcatagtttctgtcttccaagcagaaatcgtgggcctcattttgtctacgg |
27916362 |
T |
|
| Q |
216 |
aatatgcaagttcaaacagctggactcgtttgtggcttgaaagcgattcttctagtgcggtacaagctttccataaaccatctcttattctggttggtct |
315 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
27916363 |
aatatgcaagttcaaacagctggactcgtttgtggcttgaaagcgattcttctagtgcggtacaagctttccataaaccatctcttattcaggttggtct |
27916462 |
T |
|
| Q |
316 |
tcgcaaccgttggcataattgtactcacaatggtctctttattatttgcttccacgtcttccgagaaggcaatgtttgcgcggatggcctcgccgctttg |
415 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27916463 |
tcgcaaccgttggcataattgtactcacaatggtctctttattatttgcttccacgtcttccgagaaggcaatgtttgcgcggatggcctcgccgctttg |
27916562 |
T |
|
| Q |
416 |
gg |
417 |
Q |
| |
|
|| |
|
|
| T |
27916563 |
gg |
27916564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 22 - 417
Target Start/End: Complemental strand, 21407905 - 21407510
Alignment:
| Q |
22 |
cattccggttgtgtggcagccccctaccatcccttgggtcaaggccaacacagatgggtcggttcaaaatttaatggctgcttgtggtggtgtcttccgc |
121 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21407905 |
cattccggttgtgtggcagccccctaccagcccttgggtcaaggccaacacagatgggtcggttcaaaatttaatggctgcttgtggtggtgtcttccgc |
21407806 |
T |
|
| Q |
122 |
gactctagcggaacttttcttggtggattcgcaagcaatcttgacatagtttctgtcttccaagcagaaatcgtgggcctcattttgtctacggaatatg |
221 |
Q |
| |
|
|||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||| ||| |||||||| |
|
|
| T |
21407805 |
gactctcgcggaacttttctgggtggattcgcaagcaatcttggcatagtttctgtcctccaagcagaaatcttgggcctcattttggctatggaatatg |
21407706 |
T |
|
| Q |
222 |
caagttcaaacagctggactcgtttgtggcttgaaagcgattcttctagtgcggtacaagctttccataaaccatctcttattctggttggtcttcgcaa |
321 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
21407705 |
caagttcaaacagctggactcgtttatggcttgaaagtgattcttctagtgcggtacaagctttccataaacaatctcttattccggttggtcttcgcaa |
21407606 |
T |
|
| Q |
322 |
ccgttggcataattgtactcacaatggtctctttattatttgcttccacgtcttccgagaaggcaatgtttgcgcggatggcctcgccgctttggg |
417 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| |||||||||||||||||||||||| ||||||| |
|
|
| T |
21407605 |
ccgttggcataattgtactcacaatggtctctttattatttgctcccacatcttcagagaagggaatgtttgcgcggatggcctcgccactttggg |
21407510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 22 - 417
Target Start/End: Complemental strand, 21802397 - 21802002
Alignment:
| Q |
22 |
cattccggttgtgtggcagccccctaccatcccttgggtcaaggccaacacagatgggtcggttcaaaatttaatggctgcttgtggtggtgtcttccgc |
121 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21802397 |
cattccggttgtgtggcagccccctaccagcccttgggtcaaggccaacacagatgggtcggttcaaaatttaatggctgcttgtggtggtgtcttccgc |
21802298 |
T |
|
| Q |
122 |
gactctagcggaacttttcttggtggattcgcaagcaatcttgacatagtttctgtcttccaagcagaaatcgtgggcctcattttgtctacggaatatg |
221 |
Q |
| |
|
|||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||| ||| |||||||| |
|
|
| T |
21802297 |
gactctcgcggaacttttctgggtggattcgcaagcaatcttggcatagtttctgtcctccaagcagaaatcttgggcctcattttggctatggaatatg |
21802198 |
T |
|
| Q |
222 |
caagttcaaacagctggactcgtttgtggcttgaaagcgattcttctagtgcggtacaagctttccataaaccatctcttattctggttggtcttcgcaa |
321 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
21802197 |
caagttcaaacagctggactcgtttatggcttgaaagtgattcttctagtgcggtacaagctttccataaacaatctcttattccggttggtcttcgcaa |
21802098 |
T |
|
| Q |
322 |
ccgttggcataattgtactcacaatggtctctttattatttgcttccacgtcttccgagaaggcaatgtttgcgcggatggcctcgccgctttggg |
417 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||| |||||||||||||||||||||||| ||||||| |
|
|
| T |
21802097 |
ccgttggcataattgtactcacaatggtctctttattatttgctcccacatcttcagagaagggaatgtttgcgcggatggcctcgccactttggg |
21802002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 322; Significance: 0; HSPs: 1)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 16 - 417
Target Start/End: Complemental strand, 199065 - 198664
Alignment:
| Q |
16 |
ggacatcattccggttgtgtggcagccccctaccatcccttgggtcaaggccaacacagatgggtcggttcaaaatttaatggctgcttgtggtggtgtc |
115 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
199065 |
ggacatcattccggttgtgtggcagccccctaccagcccttgggtcaaggccaacacagatgggtcggttcgaaatttaatggctgcttgtggtggtgtc |
198966 |
T |
|
| Q |
116 |
ttccgcgactctagcggaacttttcttggtggattcgcaagcaatcttgacatagtttctgtcttccaagcagaaatcgtgggcctcattttgtctacgg |
215 |
Q |
| |
|
||||| |||||| || |||||||||||||||| ||| |||||||||||| |||||||| ||||||||||||||||||| |||||||||||||| ||| || |
|
|
| T |
198965 |
ttccgtgactctcgctgaacttttcttggtggtttcacaagcaatcttggcatagtttttgtcttccaagcagaaatcatgggcctcattttggctatgg |
198866 |
T |
|
| Q |
216 |
aatatgcaagttcaaacagctggactcgtttgtggcttgaaagcgattcttctagtgcggtacaagctttccataaaccatctcttattctggttggtct |
315 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
198865 |
aatatgcaagttcaaacagctggactcgtttatggcttgaaagtgattcttctagtgcggtacaagctttccatcaaccatctcttattccggttggtct |
198766 |
T |
|
| Q |
316 |
tcgcaaccgttggcataattgtactcacaatggtctctttattatttgcttccacgtcttccgagaaggcaatgtttgcgcggatggcctcgccgctttg |
415 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| || ||||||||||||||||||||||| |
|
|
| T |
198765 |
tcgcaaccgttggcataattgtactcacaatggtctctttattatttgctcccacatcttccgagaaggcaatattagcgcggatggcctcgccgctttg |
198666 |
T |
|
| Q |
416 |
gg |
417 |
Q |
| |
|
|| |
|
|
| T |
198665 |
gg |
198664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 318; Significance: 1e-179; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 16 - 417
Target Start/End: Complemental strand, 10988583 - 10988182
Alignment:
| Q |
16 |
ggacatcattccggttgtgtggcagccccctaccatcccttgggtcaaggccaacacagatgggtcggttcaaaatttaatggctgcttgtggtggtgtc |
115 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |
|
|
| T |
10988583 |
ggacatcattccggttgtgtggcagccccctaccagcccttgggtcaaggccaacacagatgggtcggttcgaactttaatggctgcttgtggtggtgtc |
10988484 |
T |
|
| Q |
116 |
ttccgcgactctagcggaacttttcttggtggattcgcaagcaatcttgacatagtttctgtcttccaagcagaaatcgtgggcctcattttgtctacgg |
215 |
Q |
| |
|
||||| |||||| ||||||||||||||||||| ||| |||| ||||||| |||||||||||||||||||||||||||| |||| ||||||||| ||| || |
|
|
| T |
10988483 |
ttccgtgactctcgcggaacttttcttggtggtttcacaagtaatcttggcatagtttctgtcttccaagcagaaatcatgggactcattttggctatgg |
10988384 |
T |
|
| Q |
216 |
aatatgcaagttcaaacagctggactcgtttgtggcttgaaagcgattcttctagtgcggtacaagctttccataaaccatctcttattctggttggtct |
315 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
10988383 |
aatatgcaagttcaaacagctggactcgtttatggcttgaaagtgattcttctagtgcggttcaagctttccataaaccatctcttattccggttagtct |
10988284 |
T |
|
| Q |
316 |
tcgcaaccgttggcataattgtactcacaatggtctctttattatttgcttccacgtcttccgagaaggcaatgtttgcgcggatggcctcgccgctttg |
415 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10988283 |
tcgcaaccgttggcataattgtactcacaagggtctctttattatttgctcccacatcttccgagaaggcaatgtttgcgcggatggcctcgccgctttg |
10988184 |
T |
|
| Q |
416 |
gg |
417 |
Q |
| |
|
|| |
|
|
| T |
10988183 |
gg |
10988182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0196 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: scaffold0196
Description:
Target: scaffold0196; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 68 - 417
Target Start/End: Complemental strand, 31849 - 31500
Alignment:
| Q |
68 |
aacacagatgggtcggttcaaaatttaatggctgcttgtggtggtgtcttccgcgactctagcggaacttttcttggtggattcgcaagcaatcttgaca |
167 |
Q |
| |
|
||||||||||||||||||| || |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||| |||| ||||||| || |
|
|
| T |
31849 |
aacacagatgggtcggttcgaactttaatggctgcttgtggtggtgtcttccgtgactctcgcggaacttttcttggtggtttcacaagtaatcttggca |
31750 |
T |
|
| Q |
168 |
tagtttctgtcttccaagcagaaatcgtgggcctcattttgtctacggaatatgcaagttcaaacagctggactcgtttgtggcttgaaagcgattcttc |
267 |
Q |
| |
|
|||||||||||||||||||||||||| |||| ||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |
|
|
| T |
31749 |
tagtttctgtcttccaagcagaaatcatgggactcattttggctatggaatatgcaagttcaaacagctggactcgtttatggcttgaaagtgattcttc |
31650 |
T |
|
| Q |
268 |
tagtgcggtacaagctttccataaaccatctcttattctggttggtcttcgcaaccgttggcataattgtactcacaatggtctctttattatttgcttc |
367 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |
|
|
| T |
31649 |
tagtgcggttcaagctttccataaaccatctcttattccggttagtcttcgcaaccgttggcataattgtactcacaagggtctctttattatttgctcc |
31550 |
T |
|
| Q |
368 |
cacgtcttccgagaaggcaatgtttgcgcggatggcctcgccgctttggg |
417 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31549 |
cacatcttccgagaaggcaatgtttgcgcggatggcctcgccgctttggg |
31500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 42 - 360
Target Start/End: Original strand, 51882371 - 51882689
Alignment:
| Q |
42 |
cccctaccatcccttgggtcaaggccaacacagatgggtcggttcaaaatttaatggctgcttgtggtggtgtcttccgcgactctagcggaacttttct |
141 |
Q |
| |
|
||||||| ||| ||||||| ||| | ||||| || ||||||||| |||||| ||| | ||||| |||||| | || || || | | ||||||||||||| |
|
|
| T |
51882371 |
cccctactatctcttgggtgaagactaacacggacgggtcggttagaaatttgatgtccgcttgcggtggtatttttcgtgattattgcggaacttttct |
51882470 |
T |
|
| Q |
142 |
tggtggattcgcaagcaatcttgacatagtttctgtcttccaagcagaaatcgtgggcctcattttgtctacggaatatgcaagttcaaacagctggact |
241 |
Q |
| |
|
|||||| ||||||| |||| ||| | ||||||||| ||| | | ||| | |||| ||||||||| ||| ||| ||||| |||||||| ||| | |
|
|
| T |
51882471 |
tggtgggttcgcaaccaatgttggtagagtttctgttttcgaggttgaagttttgggtctcattttggctatggagtatgcggcttcaaacaattggtcc |
51882570 |
T |
|
| Q |
242 |
cgtttgtggcttgaaagcgattcttctagtgcggtacaagctttccataaaccatctcttattctggttggtcttcgcaaccgttggcataattgtactc |
341 |
Q |
| |
|
|| |||||||||||||||||||| |||||||||| || || || ||||||||||||||||||| ||||||||||| ||||||||||| |||||||||| |
|
|
| T |
51882571 |
cgcttgtggcttgaaagcgattcctctagtgcggcccaggcatttcataaaccatctcttattcatgttggtcttcggaaccgttggcacaattgtactc |
51882670 |
T |
|
| Q |
342 |
acaatggtctctttattat |
360 |
Q |
| |
|
|||||||| | |||||||| |
|
|
| T |
51882671 |
acaatggtatgtttattat |
51882689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 233 - 324
Target Start/End: Original strand, 21355022 - 21355113
Alignment:
| Q |
233 |
agctggactcgtttgtggcttgaaagcgattcttctagtgcggtacaagctttccataaaccatctcttattctggttggtcttcgcaaccg |
324 |
Q |
| |
|
|||||| ||| ||| |||||||||||||| |||||||||||||| || ||||||||||||||||||||||||| ||| ||||||| ||||| |
|
|
| T |
21355022 |
agctggtctcatttatggcttgaaagcgactcttctagtgcggttcaggctttccataaaccatctcttattcctgtttgtcttcggaaccg |
21355113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 417
Target Start/End: Complemental strand, 25110621 - 25110452
Alignment:
| Q |
248 |
tggcttgaaagcgattcttctagtgcggtacaagctttccataaaccatctcttattctggttggtcttcgcaaccgttggcataattgtactcacaatg |
347 |
Q |
| |
|
||||||||||| |||||| ||||||||| ||||| |||||||||||||||||||||| || ||||||| || | ||||||||||| |||| ||| |
|
|
| T |
25110621 |
tggcttgaaagtgattctattagtgcggttcaagccttccataaaccatctcttattcctatttgtcttcggaagaggtggcataattgctctcaaaata |
25110522 |
T |
|
| Q |
348 |
gtctctttattatttgcttccacgtcttccgagaaggcaatgtttgcgcggatggcctcgccgctttggg |
417 |
Q |
| |
|
| | ||| | ||||||| || ||||||| ||||| |||||||| || |||||||| || |||||||| |
|
|
| T |
25110521 |
atttgtttctcatttgctcgcatatcttccgcgaaggaaatgtttgtgctgatggccttgctgctttggg |
25110452 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 417
Target Start/End: Complemental strand, 25169713 - 25169544
Alignment:
| Q |
248 |
tggcttgaaagcgattcttctagtgcggtacaagctttccataaaccatctcttattctggttggtcttcgcaaccgttggcataattgtactcacaatg |
347 |
Q |
| |
|
||||||||||| |||||| ||||||||| ||||| |||||||||||||||||||||| || ||||||| || | ||||||||||| |||| ||| |
|
|
| T |
25169713 |
tggcttgaaagtgattctattagtgcggttcaagccttccataaaccatctcttattcctatttgtcttcggaagaggtggcataattgctctcaaaata |
25169614 |
T |
|
| Q |
348 |
gtctctttattatttgcttccacgtcttccgagaaggcaatgtttgcgcggatggcctcgccgctttggg |
417 |
Q |
| |
|
| | ||| | ||||||| || ||||||| ||||| |||||||| || |||||||| || |||||||| |
|
|
| T |
25169613 |
atttgtttctcatttgctcgcatatcttccgcgaaggaaatgtttgtgctgatggccttgctgctttggg |
25169544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 252 - 393
Target Start/End: Complemental strand, 33852419 - 33852278
Alignment:
| Q |
252 |
ttgaaagcgattcttctagtgcggtacaagctttccataaaccatctcttattctggttggtcttcgcaaccgttggcataattgtactcacaatggtct |
351 |
Q |
| |
|
||||||| ||||||||| |||| || |||||||||||||||||||||||||||| || ||||||| ||| ||||| || || ||||| ||||| | |
|
|
| T |
33852419 |
ttgaaagtgattcttcttgtgcagttcaagctttccataaaccatctcttattcctatttgtcttcggaacgagtggcacaactgcactcataatggctt |
33852320 |
T |
|
| Q |
352 |
ctttattatttgcttccacgtcttccgagaaggcaatgtttg |
393 |
Q |
| |
|
||||| ||||| | ||| ||||||||||||| |||||||| |
|
|
| T |
33852319 |
gtttatgatttgttctcacatcttccgagaagggaatgtttg |
33852278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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