View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11737_high_12 (Length: 391)
Name: NF11737_high_12
Description: NF11737
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11737_high_12 |
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Alignment Details
Target: chr8 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 5 - 385
Target Start/End: Complemental strand, 30841628 - 30841247
Alignment:
| Q |
5 |
ggatgatccatcgggctcccctcgtaacccaacaatggtctctgtgacgtggttcaatggagagttcgaccaactctttgtattgaaattcttttgaacc |
104 |
Q |
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| T |
30841628 |
ggatgatccatcgggctcctctcgtaacgcaacagtggtctctgtgacgtggtttaatgaagagttcgaccaactctttgtattgaaattcttttgaacc |
30841529 |
T |
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| Q |
105 |
aagggtgttcaggcaggttgtcacgttgagtgtcatcaactgcggtgcaagtaagtgtaagtggatgaaaaagtttatgtttgacggggggtatgatgaa |
204 |
Q |
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| T |
30841528 |
aagggtgttcaggcgggatgtcacgttaagtgtcatcaactgcggtgcaagtaagtgtaagtggatgaaaaagtttatgtttgacggggggtatgatgaa |
30841429 |
T |
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| Q |
205 |
ttgatgagctcacacctggagagaagattgttgtgtaacaagcgtgagttggaagttgcaagtatgagttagacttagaagtat-acattacttagaaaa |
303 |
Q |
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| T |
30841428 |
ttgatgagcttacacctggagagaagattgtagtgtaacaaccgtgagttggaagttgcaagtatgagttagacttagaagtataacattacttagaaaa |
30841329 |
T |
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| Q |
304 |
gtgaaggtagagcacttataaataagattactcataaacctannnnnnnaaggttttgggtaaagatgtgatgtccatctca |
385 |
Q |
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| T |
30841328 |
gtgaaggttgaacacttataaataagatgactcataaacctatttttttaaggttttgggtaaagatgcggtgtccaactca |
30841247 |
T |
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