View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11737_low_1 (Length: 778)

Name: NF11737_low_1
Description: NF11737
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11737_low_1
NF11737_low_1
[»] chr7 (49 HSPs)
chr7 (11-108)||(30512633-30512729)
chr7 (261-339)||(5611043-5611121)
chr7 (14-109)||(5610719-5610814)
chr7 (421-470)||(5611177-5611226)
chr7 (693-761)||(30513129-30513197)
chr7 (646-695)||(12180846-12180895)
chr7 (421-470)||(30512968-30513017)
chr7 (645-694)||(44413881-44413930)
chr7 (645-689)||(4517868-4517912)
chr7 (645-693)||(24555703-24555751)
chr7 (645-693)||(38192961-38193009)
chr7 (652-694)||(13286883-13286925)
chr7 (590-648)||(19979877-19979935)
chr7 (591-649)||(45163914-45163972)
chr7 (645-694)||(10980607-10980655)
chr7 (645-694)||(14079007-14079056)
chr7 (645-694)||(14389035-14389084)
chr7 (645-694)||(31186666-31186714)
chr7 (590-638)||(13279426-13279474)
chr7 (645-693)||(13882602-13882649)
chr7 (653-693)||(21298264-21298303)
chr7 (590-638)||(26050175-26050223)
chr7 (590-638)||(26059534-26059582)
chr7 (653-693)||(26930633-26930673)
chr7 (590-638)||(31186668-31186716)
chr7 (593-649)||(39065386-39065442)
chr7 (590-649)||(9915651-9915710)
chr7 (590-649)||(9923563-9923622)
chr7 (645-704)||(13797404-13797463)
chr7 (591-649)||(13797608-13797667)
chr7 (590-649)||(16902335-16902393)
chr7 (591-649)||(23371677-23371736)
chr7 (650-692)||(3951383-3951425)
chr7 (645-691)||(13797622-13797667)
chr7 (652-694)||(15037423-15037465)
chr7 (645-695)||(20041146-20041196)
chr7 (645-691)||(23371690-23371736)
chr7 (653-695)||(24845635-24845676)
chr7 (592-630)||(25077800-25077838)
chr7 (645-695)||(29141168-29141217)
chr7 (590-628)||(35913303-35913341)
chr7 (645-691)||(45163914-45163959)
chr7 (693-758)||(5611346-5611411)
chr7 (652-693)||(10688457-10688497)
chr7 (591-648)||(21298015-21298072)
chr7 (644-693)||(21522097-21522146)
chr7 (593-638)||(29141166-29141211)
chr7 (590-647)||(39580166-39580223)
chr7 (645-694)||(44569089-44569137)
[»] chr4 (25 HSPs)
chr4 (261-339)||(32698867-32698945)
chr4 (11-109)||(32698538-32698636)
chr4 (693-758)||(40198726-40198791)
chr4 (421-470)||(32699002-32699051)
chr4 (645-692)||(5402008-5402055)
chr4 (590-649)||(21780122-21780181)
chr4 (645-694)||(5401759-5401808)
chr4 (645-694)||(18454440-18454489)
chr4 (693-758)||(32699153-32699218)
chr4 (421-470)||(45619415-45619464)
chr4 (645-693)||(16493517-16493564)
chr4 (645-693)||(18320706-18320754)
chr4 (645-693)||(18454191-18454239)
chr4 (590-638)||(50138488-50138536)
chr4 (645-693)||(54130543-54130590)
chr4 (591-646)||(2921775-2921829)
chr4 (642-693)||(20125426-20125476)
chr4 (643-694)||(21798330-21798381)
chr4 (590-629)||(38656073-38656112)
chr4 (591-641)||(45273991-45274042)
chr4 (645-692)||(46094251-46094297)
chr4 (591-629)||(17289994-17290032)
chr4 (645-694)||(17800753-17800800)
chr4 (653-694)||(17289740-17289781)
chr4 (645-694)||(44519455-44519503)
[»] chr6 (16 HSPs)
chr6 (271-375)||(20391897-20392001)
chr6 (276-339)||(1171120-1171183)
chr6 (693-758)||(1171492-1171557)
chr6 (700-761)||(20393113-20393174)
chr6 (590-649)||(13114398-13114457)
chr6 (646-694)||(7922546-7922594)
chr6 (592-636)||(31116481-31116525)
chr6 (590-631)||(22574046-22574087)
chr6 (645-694)||(24062405-24062453)
chr6 (645-691)||(1319358-1319402)
chr6 (590-629)||(22573802-22573841)
chr6 (653-692)||(25400796-25400835)
chr6 (591-649)||(19325614-19325672)
chr6 (590-628)||(24062167-24062205)
chr6 (661-694)||(10827247-10827280)
chr6 (592-625)||(16130484-16130517)
[»] chr3 (21 HSPs)
chr3 (693-751)||(22508898-22508956)
chr3 (592-649)||(12766941-12766998)
chr3 (590-649)||(53806794-53806853)
chr3 (645-695)||(30586159-30586209)
chr3 (590-636)||(49263029-49263075)
chr3 (645-694)||(6510213-6510261)
chr3 (650-695)||(49880500-49880545)
chr3 (652-693)||(51252302-51252343)
chr3 (645-693)||(18464952-18465000)
chr3 (653-693)||(19624029-19624068)
chr3 (590-638)||(20737510-20737558)
chr3 (421-469)||(22509059-22509107)
chr3 (645-693)||(53806807-53806854)
chr3 (590-649)||(6510215-6510273)
chr3 (594-649)||(12767164-12767219)
chr3 (590-629)||(40462761-40462800)
chr3 (645-692)||(42349021-42349068)
chr3 (590-636)||(47115573-47115619)
chr3 (645-694)||(5205365-5205414)
chr3 (590-647)||(49872949-49873006)
chr3 (645-694)||(49872960-49873008)
[»] chr2 (22 HSPs)
chr2 (645-695)||(22829348-22829398)
chr2 (646-695)||(18701798-18701847)
chr2 (590-649)||(12028198-12028257)
chr2 (590-649)||(19493447-19493505)
chr2 (590-649)||(22535454-22535513)
chr2 (656-695)||(33868472-33868511)
chr2 (652-694)||(25227821-25227863)
chr2 (645-690)||(18665677-18665722)
chr2 (590-647)||(22116155-22116212)
chr2 (652-693)||(25927139-25927179)
chr2 (645-694)||(34635953-34636002)
chr2 (653-693)||(85438-85478)
chr2 (652-691)||(25926889-25926927)
chr2 (590-649)||(37200347-37200405)
chr2 (590-647)||(85439-85497)
chr2 (590-636)||(85681-85726)
chr2 (645-695)||(20182261-20182310)
chr2 (591-649)||(41089156-41089214)
chr2 (590-647)||(20182264-20182321)
chr2 (590-631)||(29835102-29835143)
chr2 (645-694)||(34635704-34635752)
chr2 (645-694)||(45464462-45464511)
[»] chr8 (14 HSPs)
chr8 (590-647)||(27987297-27987354)
chr8 (590-647)||(28044599-28044656)
chr8 (693-755)||(36589226-36589288)
chr8 (421-470)||(36589077-36589126)
chr8 (590-649)||(24971175-24971235)
chr8 (590-649)||(960495-960554)
chr8 (590-649)||(3912478-3912537)
chr8 (653-695)||(13567235-13567277)
chr8 (590-636)||(14329611-14329657)
chr8 (590-628)||(27987545-27987583)
chr8 (590-628)||(28044847-28044885)
chr8 (645-695)||(41565519-41565569)
chr8 (591-628)||(2696455-2696492)
chr8 (651-692)||(43978565-43978606)
[»] chr5 (19 HSPs)
chr5 (653-694)||(29321326-29321367)
chr5 (642-694)||(20076887-20076939)
chr5 (646-692)||(2870896-2870941)
chr5 (645-695)||(33659116-33659166)
chr5 (421-470)||(3937745-3937794)
chr5 (590-649)||(2870649-2870709)
chr5 (645-693)||(31861490-31861537)
chr5 (645-693)||(39153415-39153463)
chr5 (590-649)||(10976745-10976804)
chr5 (645-692)||(31861737-31861784)
chr5 (645-692)||(36992994-36993040)
chr5 (645-692)||(39418962-39419009)
chr5 (653-695)||(711234-711276)
chr5 (645-695)||(10976758-10976807)
chr5 (645-691)||(12383054-12383100)
chr5 (590-648)||(33052817-33052875)
chr5 (645-691)||(33658871-33658917)
chr5 (653-694)||(24098682-24098722)
chr5 (653-694)||(33052815-33052855)
[»] chr1 (21 HSPs)
chr1 (645-694)||(13154577-13154626)
chr1 (590-648)||(24987608-24987666)
chr1 (645-694)||(50595998-50596045)
chr1 (647-692)||(5348163-5348207)
chr1 (645-702)||(24987598-24987654)
chr1 (645-694)||(28410912-28410960)
chr1 (653-694)||(36343152-36343193)
chr1 (590-638)||(28410914-28410962)
chr1 (590-649)||(9043448-9043507)
chr1 (590-649)||(18458800-18458859)
chr1 (645-692)||(35034306-35034352)
chr1 (645-692)||(42736832-42736878)
chr1 (593-647)||(15336378-15336432)
chr1 (591-636)||(2472595-2472640)
chr1 (645-694)||(5045965-5046013)
chr1 (652-693)||(16699122-16699163)
chr1 (645-694)||(22604673-22604721)
chr1 (646-695)||(34360256-34360305)
chr1 (645-694)||(42736612-42736661)
chr1 (653-698)||(44200321-44200365)
chr1 (656-693)||(50105418-50105455)
[»] scaffold0769 (2 HSPs)
scaffold0769 (645-694)||(3912-3961)
scaffold0769 (645-694)||(4162-4210)
[»] scaffold0727 (2 HSPs)
scaffold0727 (652-693)||(1160-1200)
scaffold0727 (652-691)||(837-875)
[»] scaffold0142 (1 HSPs)
scaffold0142 (645-693)||(34568-34616)
[»] scaffold0079 (1 HSPs)
scaffold0079 (653-693)||(6809-6849)
[»] scaffold0050 (1 HSPs)
scaffold0050 (643-690)||(4945-4991)
[»] scaffold0809 (1 HSPs)
scaffold0809 (591-629)||(4015-4053)
[»] scaffold0010 (1 HSPs)
scaffold0010 (590-636)||(26308-26354)
[»] scaffold0384 (1 HSPs)
scaffold0384 (590-631)||(4443-4484)
[»] scaffold0136 (1 HSPs)
scaffold0136 (653-694)||(655-695)
[»] scaffold0031 (1 HSPs)
scaffold0031 (652-693)||(2077-2118)


Alignment Details
Target: chr7 (Bit Score: 70; Significance: 4e-31; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 30512633 - 30512729
Alignment:
Q  11 cagagaaacatgaacaacacaagcgcacgacaacgaccacgatggcttgatatgaaaagaagaacagaaatcgaaaacgatagaggcatactcgattg 108  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||  ||| ||||||||||||||||||||||||||||||||||    
T  30512633 cagagaaacgtgaacaacacaagcgcacgacaa-gaccacgatggcttgatgtgaaaatgagatcagaaatcgaaaacgatagaggcatactcgattg 30512729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 261 - 339
Target Start/End: Original strand, 5611043 - 5611121
Alignment:
Q  261 caaacatgtaggtttgggatgaatttgttgtgttgaattgagtttagcttgaagaagaaaggttgaaggttggattggt 339  Q
    |||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| || |||||||    
T  5611043 caaacatgaaggtttgggatgaatttgctgtgttaaattgagtttagcttgaagaagaaaggttgaagcttagattggt 5611121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 14 - 109
Target Start/End: Original strand, 5610719 - 5610814
Alignment:
Q  14 agaaacatgaacaacacaagcgcacgacaacgaccacgatggcttgatatgaaaagaagaacagaaatcgaaaacgatagaggcatactcgattgc 109  Q
    ||||| |||||  ||||||||||||| ||||||||||||||| ||||||||||||| |||  | |||||||||| ||||||||| |||||||||||    
T  5610719 agaaatatgaagcacacaagcgcacggcaacgaccacgatggattgatatgaaaaggagataaaaaatcgaaaatgatagaggcctactcgattgc 5610814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 421 - 470
Target Start/End: Original strand, 5611177 - 5611226
Alignment:
Q  421 taaaatttggggatgaacataaattaatttgttgatgaggatgaatgttg 470  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  5611177 taaaatttggggatgaacatgaattaatttgttgatgaagatgaatgttg 5611226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 693 - 761
Target Start/End: Original strand, 30513129 - 30513197
Alignment:
Q  693 tatgttaaatgacatagttgtcacatggaggacatctgggaagcttaacacagtcagcaactgacatgt 761  Q
    |||| ||||||||||| ||| ||| |||||||||| || ||||||||||||| ||||||||||||||||    
T  30513129 tatgataaatgacataattgccacgtggaggacatatgtgaagcttaacacattcagcaactgacatgt 30513197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 646 - 695
Target Start/End: Original strand, 12180846 - 12180895
Alignment:
Q  646 aaatcggaaatgacctatattacaagaggataaagacctattaaccctat 695  Q
    |||||| ||||||||||||||||| | |||||||||||||||||||||||    
T  12180846 aaatcgaaaatgacctatattacagggggataaagacctattaaccctat 12180895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 421 - 470
Target Start/End: Original strand, 30512968 - 30513017
Alignment:
Q  421 taaaatttggggatgaacataaattaatttgttgatgaggatgaatgttg 470  Q
    |||||||| ||||||||||| ||||||||||||||||| |||||||||||    
T  30512968 taaaatttagggatgaacatgaattaatttgttgatgaagatgaatgttg 30513017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 645 - 694
Target Start/End: Complemental strand, 44413930 - 44413881
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaacccta 694  Q
    |||||||||||| |||||||||||| |||| |||||||||||||||||||    
T  44413930 aaaatcggaaataacctatattacaggagggtaaagacctattaacccta 44413881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 645 - 689
Target Start/End: Complemental strand, 4517912 - 4517868
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaa 689  Q
    ||||||||||||||||||||||||||| || ||||||||||||||    
T  4517912 aaaatcggaaatgacctatattacaagggggtaaagacctattaa 4517868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 645 - 693
Target Start/End: Complemental strand, 24555751 - 24555703
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaaccct 693  Q
    |||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  24555751 aaaatcagaaatgacctatattacaggagggtaaagacctattaaccct 24555703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 645 - 693
Target Start/End: Complemental strand, 38193009 - 38192961
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaaccct 693  Q
    ||||||||||||||||||||||||| | || ||||||||||||||||||    
T  38193009 aaaatcggaaatgacctatattacaggggggtaaagacctattaaccct 38192961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 652 - 694
Target Start/End: Original strand, 13286883 - 13286925
Alignment:
Q  652 gaaatgacctatattacaagaggataaagacctattaacccta 694  Q
    |||||||||||||||||||| || |||||||||||||||||||    
T  13286883 gaaatgacctatattacaagggggtaaagacctattaacccta 13286925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 590 - 648
Target Start/End: Complemental strand, 19979935 - 19979877
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattttcgatttttcacctgtaaaa 648  Q
    ||||||||||||||||||||| |||||||||  |||||||  ||||||| |||||||||    
T  19979935 gggttaataggtctttaccccctataatatatgtcattttttatttttcccctgtaaaa 19979877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 591 - 649
Target Start/End: Original strand, 45163914 - 45163972
Alignment:
Q  591 ggttaataggtctttaccccgtataatatagatcattttcgatttttcacctgtaaaat 649  Q
    |||||||||||||||||||| | |||||||| |||||||||||||| |  |||||||||    
T  45163914 ggttaataggtctttaccccttgtaatataggtcattttcgattttcccactgtaaaat 45163972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 645 - 694
Target Start/End: Original strand, 10980607 - 10980655
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaacccta 694  Q
    |||||| ||||||||||||||||| ||||| |||||||||||||||||||    
T  10980607 aaaatcagaaatgacctatattac-agagggtaaagacctattaacccta 10980655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 645 - 694
Target Start/End: Original strand, 14079007 - 14079056
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaacccta 694  Q
    ||||||| ||||||||||||||||| | || |||||||||||||||||||    
T  14079007 aaaatcgaaaatgacctatattacatgggggtaaagacctattaacccta 14079056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 645 - 694
Target Start/End: Original strand, 14389035 - 14389084
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaacccta 694  Q
    ||||||| ||||||||||||||||| | || |||||||||||||||||||    
T  14389035 aaaatcgaaaatgacctatattacatgggggtaaagacctattaacccta 14389084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 645 - 694
Target Start/End: Complemental strand, 31186714 - 31186666
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaacccta 694  Q
    ||||||| ||||||||||||||||| |||| |||||||||||||||||||    
T  31186714 aaaatcgaaaatgacctatattaca-gagggtaaagacctattaacccta 31186666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 590 - 638
Target Start/End: Complemental strand, 13279474 - 13279426
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattttcgatttttc 638  Q
    ||||||||||||||||||||| | |||||||| ||||||||| ||||||    
T  13279474 gggttaataggtctttaccccctgtaatataggtcattttcggtttttc 13279426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 645 - 693
Target Start/End: Complemental strand, 13882649 - 13882602
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaaccct 693  Q
    |||||| ||||||||||||||||| ||||| ||||||||||||||||||    
T  13882649 aaaatcagaaatgacctatattac-agagggtaaagacctattaaccct 13882602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 653 - 693
Target Start/End: Original strand, 21298264 - 21298303
Alignment:
Q  653 aaatgacctatattacaagaggataaagacctattaaccct 693  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  21298264 aaatgacctatattacaag-ggataaagacctattaaccct 21298303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 590 - 638
Target Start/End: Original strand, 26050175 - 26050223
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattttcgatttttc 638  Q
    ||||||||||||||||||||| | |||||||| ||||||||| ||||||    
T  26050175 gggttaataggtctttaccccctctaatataggtcattttcggtttttc 26050223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 590 - 638
Target Start/End: Original strand, 26059534 - 26059582
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattttcgatttttc 638  Q
    ||||||||||||||||||||| | |||||||| ||||||||| ||||||    
T  26059534 gggttaataggtctttaccccctctaatataggtcattttcggtttttc 26059582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 653 - 693
Target Start/End: Complemental strand, 26930673 - 26930633
Alignment:
Q  653 aaatgacctatattacaagaggataaagacctattaaccct 693  Q
    ||||||||||||||||||  |||||||||||||||||||||    
T  26930673 aaatgacctatattacaaagggataaagacctattaaccct 26930633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 590 - 638
Target Start/End: Original strand, 31186668 - 31186716
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattttcgatttttc 638  Q
    ||||||||||||||||||||  | |||||||| ||||||||||||||||    
T  31186668 gggttaataggtctttaccctctgtaatataggtcattttcgatttttc 31186716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 593 - 649
Target Start/End: Original strand, 39065386 - 39065442
Alignment:
Q  593 ttaataggtctttaccccgtataatatagatcattttcgatttttcacctgtaaaat 649  Q
    |||||||||||||||||| | |||||||| |||||| || |||||| ||||||||||    
T  39065386 ttaataggtctttaccccctgtaatataggtcatttccggtttttcccctgtaaaat 39065442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 590 - 649
Target Start/End: Original strand, 9915651 - 9915710
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattttcgatttttcacctgtaaaat 649  Q
    ||||||||||||||||||||| | |||||||| | ||||||  |||||| ||||||||||    
T  9915651 gggttaataggtctttaccccctgtaatataggttattttcagtttttcccctgtaaaat 9915710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 590 - 649
Target Start/End: Original strand, 9923563 - 9923622
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattttcgatttttcacctgtaaaat 649  Q
    ||||||||||||||||||||| | |||||||| | ||||||  |||||| ||||||||||    
T  9923563 gggttaataggtctttaccccctgtaatataggttattttcagtttttcccctgtaaaat 9923622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 645 - 704
Target Start/End: Complemental strand, 13797463 - 13797404
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaaccctatgttaaatga 704  Q
    |||| |||||||||| ||||||||| | || |||||||||||||||||| | ||||||||    
T  13797463 aaaaccggaaatgacttatattacaggggggtaaagacctattaaccctgtattaaatga 13797404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 591 - 649
Target Start/End: Complemental strand, 13797667 - 13797608
Alignment:
Q  591 ggttaataggtctttaccccgtataatatagatcattttcgatttt-tcacctgtaaaat 649  Q
    |||||||||||||||||||| | |||||||| |||||| ||||||| || ||||||||||    
T  13797667 ggttaataggtctttaccccctgtaatataggtcatttccgattttctcccctgtaaaat 13797608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 590 - 649
Target Start/End: Complemental strand, 16902393 - 16902335
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattttcgatttttcacctgtaaaat 649  Q
    ||||||||||||||||||||| | |||||||| ||||||| | |||||| ||||||||||    
T  16902393 gggttaataggtctttacccc-tgtaatataggtcatttttggtttttcccctgtaaaat 16902335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 591 - 649
Target Start/End: Complemental strand, 23371736 - 23371677
Alignment:
Q  591 ggttaataggtctttaccc-cgtataatatagatcattttcgatttttcacctgtaaaat 649  Q
    ||||||||||||||||||| | |||||||||| |||||||||||||| | || |||||||    
T  23371736 ggttaataggtctttaccctcctataatataggtcattttcgattttcctcccgtaaaat 23371677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 650 - 692
Target Start/End: Complemental strand, 3951425 - 3951383
Alignment:
Q  650 cggaaatgacctatattacaagaggataaagacctattaaccc 692  Q
    ||||||||||||||||||||   ||||||||||||||||||||    
T  3951425 cggaaatgacctatattacagagggataaagacctattaaccc 3951383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 645 - 691
Target Start/End: Original strand, 13797622 - 13797667
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaacc 691  Q
    |||||||||||||||||||||||| || || ||||||||||||||||    
T  13797622 aaaatcggaaatgacctatattac-agggggtaaagacctattaacc 13797667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 652 - 694
Target Start/End: Original strand, 15037423 - 15037465
Alignment:
Q  652 gaaatgacctatattacaagaggataaagacctattaacccta 694  Q
    |||||||||||||||||| | || |||||||||||||||||||    
T  15037423 gaaatgacctatattacaggggggtaaagacctattaacccta 15037465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 645 - 695
Target Start/End: Original strand, 20041146 - 20041196
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaaccctat 695  Q
    |||| |||||||||||||||||||| | || |||| |||||||||||||||    
T  20041146 aaaaccggaaatgacctatattacaggggggtaaaaacctattaaccctat 20041196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 645 - 691
Target Start/End: Original strand, 23371690 - 23371736
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaacc 691  Q
    ||||||| ||||||||||||||| | |||| ||||||||||||||||    
T  23371690 aaaatcgaaaatgacctatattataggagggtaaagacctattaacc 23371736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 653 - 695
Target Start/End: Complemental strand, 24845676 - 24845635
Alignment:
Q  653 aaatgacctatattacaagaggataaagacctattaaccctat 695  Q
    ||||||||||||||||| |||| ||||||||||||||||||||    
T  24845676 aaatgacctatattacaggagg-taaagacctattaaccctat 24845635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 592 - 630
Target Start/End: Complemental strand, 25077838 - 25077800
Alignment:
Q  592 gttaataggtctttaccccgtataatatagatcattttc 630  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  25077838 gttaataggtctttaccccctttaatatagatcattttc 25077800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 645 - 695
Target Start/End: Original strand, 29141168 - 29141217
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaaccctat 695  Q
    ||||||| |||||||||||||||| || ||||||||||||||||| |||||    
T  29141168 aaaatcgaaaatgacctatattac-aggggataaagacctattaatcctat 29141217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 590 - 628
Target Start/End: Complemental strand, 35913341 - 35913303
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattt 628  Q
    ||||||||||||||||||||| | |||||||||||||||    
T  35913341 gggttaataggtctttaccccctgtaatatagatcattt 35913303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 645 - 691
Target Start/End: Complemental strand, 45163959 - 45163914
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaacc 691  Q
    ||||||| ||||||||||||||||||| || ||||||||||||||||    
T  45163959 aaaatcgaaaatgacctatattacaag-gggtaaagacctattaacc 45163914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 693 - 758
Target Start/End: Original strand, 5611346 - 5611411
Alignment:
Q  693 tatgttaaatgacatagttgtcacatggaggacatctgggaagcttaacacagtcagcaactgaca 758  Q
    |||||||||||  ||| ||| ||| | |||||||| |||||||||||||||||| | |||||||||    
T  5611346 tatgttaaatggtataattgccacgtagaggacatgtgggaagcttaacacagttaacaactgaca 5611411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 652 - 693
Target Start/End: Complemental strand, 10688497 - 10688457
Alignment:
Q  652 gaaatgacctatattacaagaggataaagacctattaaccct 693  Q
    |||||||||||||||||| |||| ||||||||||||||||||    
T  10688497 gaaatgacctatattaca-gagggtaaagacctattaaccct 10688457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 591 - 648
Target Start/End: Original strand, 21298015 - 21298072
Alignment:
Q  591 ggttaataggtctttaccccgtataatatagatcattttcgatttttcacctgtaaaa 648  Q
    |||||||||||||||||||| | |||||||  ||||||||| |||||| | |||||||    
T  21298015 ggttaataggtctttaccccctgtaatataagtcattttcggtttttcccgtgtaaaa 21298072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 644 - 693
Target Start/End: Original strand, 21522097 - 21522146
Alignment:
Q  644 taaaatcggaaatgacctatattacaagaggataaagacctattaaccct 693  Q
    |||||||||||||||||||||||||| | |||||||   |||||||||||    
T  21522097 taaaatcggaaatgacctatattacagggggataaaacactattaaccct 21522146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 593 - 638
Target Start/End: Complemental strand, 29141211 - 29141166
Alignment:
Q  593 ttaataggtctttaccccgtataatatagatcattttcgatttttc 638  Q
    |||||||||||||| ||| | |||||||| ||||||||||||||||    
T  29141211 ttaataggtctttatcccctgtaatataggtcattttcgatttttc 29141166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 590 - 647
Target Start/End: Complemental strand, 39580223 - 39580166
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattttcgatttttcacctgtaaa 647  Q
    ||||||||||||||||||||| | |||||||| |||||| || |||| | ||||||||    
T  39580223 gggttaataggtctttaccccctgtaatataggtcatttccggttttcctcctgtaaa 39580166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 645 - 694
Target Start/End: Original strand, 44569089 - 44569137
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaacccta 694  Q
    ||||||| ||||||||| ||||||| | ||||||||||||||||||||||    
T  44569089 aaaatcgaaaatgacctgtattacagg-ggataaagacctattaacccta 44569137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 2e-29; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 261 - 339
Target Start/End: Original strand, 32698867 - 32698945
Alignment:
Q  261 caaacatgtaggtttgggatgaatttgttgtgttgaattgagtttagcttgaagaagaaaggttgaaggttggattggt 339  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  32698867 caaacatgtaggtttgggatgaatttgctgtgttaaattgagtttagcttgaagaagaaaggttgaagcttggattggt 32698945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 32698538 - 32698636
Alignment:
Q  11 cagagaaacatgaacaacacaagcgcacgacaacgaccacgatggcttgatatgaaaagaagaacagaaatcgaaaacgatagaggcatactcgattgc 109  Q
    ||||||||||||||  ||||||||||||| ||||||||||||||| ||||||||||||| |||  | |||||||||| ||||||||| |||| ||||||    
T  32698538 cagagaaacatgaagcacacaagcgcacggcaacgaccacgatggattgatatgaaaaggagataaaaaatcgaaaatgatagaggcctacttgattgc 32698636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 693 - 758
Target Start/End: Complemental strand, 40198791 - 40198726
Alignment:
Q  693 tatgttaaatgacatagttgtcacatggaggacatctgggaagcttaacacagtcagcaactgaca 758  Q
    |||||||||||||||| ||| ||| |||||||||| ||||||||||||||||||||||||||||||    
T  40198791 tatgttaaatgacataattgccacgtggaggacatgtgggaagcttaacacagtcagcaactgaca 40198726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 421 - 470
Target Start/End: Original strand, 32699002 - 32699051
Alignment:
Q  421 taaaatttggggatgaacataaattaatttgttgatgaggatgaatgttg 470  Q
    |||||||| ||||||||||| ||||||||||||||||| |||||||||||    
T  32699002 taaaatttagggatgaacatgaattaatttgttgatgaagatgaatgttg 32699051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 645 - 692
Target Start/End: Original strand, 5402008 - 5402055
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaaccc 692  Q
    |||| |||||||||||||||||||||| || |||||||||||||||||    
T  5402008 aaaaccggaaatgacctatattacaagggggtaaagacctattaaccc 5402055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 590 - 649
Target Start/End: Original strand, 21780122 - 21780181
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattttcgatttttcacctgtaaaat 649  Q
    ||||||||||||||||||||| | |||||||| ||||||||| |||| | ||||||||||    
T  21780122 gggttaataggtctttaccccctgtaatataggtcattttcggttttccccctgtaaaat 21780181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 645 - 694
Target Start/End: Complemental strand, 5401808 - 5401759
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaacccta 694  Q
    ||||||| ||||||||||||||||| | || |||||||||||||||||||    
T  5401808 aaaatcgaaaatgacctatattacaggggggtaaagacctattaacccta 5401759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 645 - 694
Target Start/End: Original strand, 18454440 - 18454489
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaacccta 694  Q
    |||| |||||||||||||||||||| | || |||||||||||||||||||    
T  18454440 aaaaccggaaatgacctatattacaggggggtaaagacctattaacccta 18454489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 693 - 758
Target Start/End: Original strand, 32699153 - 32699218
Alignment:
Q  693 tatgttaaatgacatagttgtcacatggaggacatctgggaagcttaacacagtcagcaactgaca 758  Q
    |||||||||||  ||| ||| ||| |||||||||| ||||||| |||||||| |||||||||||||    
T  32699153 tatgttaaatggtataattgccacgtggaggacatgtgggaagtttaacacaatcagcaactgaca 32699218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 421 - 470
Target Start/End: Original strand, 45619415 - 45619464
Alignment:
Q  421 taaaatttggggatgaacataaattaatttgttgatgaggatgaatgttg 470  Q
    |||||||||||||||||||| ||| ||||||||||| | |||||||||||    
T  45619415 taaaatttggggatgaacatgaatgaatttgttgataaagatgaatgttg 45619464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 645 - 693
Target Start/End: Complemental strand, 16493564 - 16493517
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaaccct 693  Q
    |||| |||||||||||||||||||| |||| ||||||||||||||||||    
T  16493564 aaaaccggaaatgacctatattacaggagg-taaagacctattaaccct 16493517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 645 - 693
Target Start/End: Original strand, 18320706 - 18320754
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaaccct 693  Q
    |||| |||||||||||||||||||| | || ||||||||||||||||||    
T  18320706 aaaaccggaaatgacctatattacaggggggtaaagacctattaaccct 18320754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 645 - 693
Target Start/End: Complemental strand, 18454239 - 18454191
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaaccct 693  Q
    |||| |||||||||||||||||||| | || ||||||||||||||||||    
T  18454239 aaaaccggaaatgacctatattacaggggggtaaagacctattaaccct 18454191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 590 - 638
Target Start/End: Original strand, 50138488 - 50138536
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattttcgatttttc 638  Q
    ||||||||||||||||||||| | |||||||| ||||||||| ||||||    
T  50138488 gggttaataggtctttaccccctgtaatataggtcattttcggtttttc 50138536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 645 - 693
Target Start/End: Original strand, 54130543 - 54130590
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaaccct 693  Q
    |||||||||||||||||||||||  || |||||||||||||||||||||    
T  54130543 aaaatcggaaatgacctatatta-gaggggataaagacctattaaccct 54130590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 591 - 646
Target Start/End: Complemental strand, 2921829 - 2921775
Alignment:
Q  591 ggttaataggtctttaccccgtataatatagatcattttcgatttttcacctgtaa 646  Q
    ||||||||| |||||||||| |||||||||| |||||||||||||| | |||||||    
T  2921829 ggttaatagatctttacccc-tataatataggtcattttcgattttcctcctgtaa 2921775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 642 - 693
Target Start/End: Original strand, 20125426 - 20125476
Alignment:
Q  642 tgtaaaatcggaaatgacctatattacaagaggataaagacctattaaccct 693  Q
    ||||||| ||||||||||||||||||| || || ||||||||||||||||||    
T  20125426 tgtaaaaccggaaatgacctatattac-agggggtaaagacctattaaccct 20125476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 643 - 694
Target Start/End: Complemental strand, 21798381 - 21798330
Alignment:
Q  643 gtaaaatcggaaatgacctatattacaagaggataaagacctattaacccta 694  Q
    |||||| | |||||||||||||||||| | || |||||||||||||||||||    
T  21798381 gtaaaaccagaaatgacctatattacaggggggtaaagacctattaacccta 21798330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 590 - 629
Target Start/End: Complemental strand, 38656112 - 38656073
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcatttt 629  Q
    ||||||||||||||||||||| |||||||||| |||||||    
T  38656112 gggttaataggtctttaccccctataatataggtcatttt 38656073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 591 - 641
Target Start/End: Original strand, 45273991 - 45274042
Alignment:
Q  591 ggttaataggtctttacccc-gtataatatagatcattttcgatttttcacc 641  Q
    |||||||||||||||||||| |||||||||| |||||||||| |||| ||||    
T  45273991 ggttaataggtctttacccccgtataatatatatcattttcggttttacacc 45274042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 645 - 692
Target Start/End: Original strand, 46094251 - 46094297
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaaccc 692  Q
    |||| ||||||||||||||||||| ||||| |||||||||||||||||    
T  46094251 aaaaccggaaatgacctatattac-agagggtaaagacctattaaccc 46094297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 591 - 629
Target Start/End: Complemental strand, 17290032 - 17289994
Alignment:
Q  591 ggttaataggtctttaccccgtataatatagatcatttt 629  Q
    |||||||||||||||||||| |||||||||| |||||||    
T  17290032 ggttaataggtctttaccccctataatataggtcatttt 17289994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 645 - 694
Target Start/End: Complemental strand, 17800800 - 17800753
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaacccta 694  Q
    ||||||| ||||||||||||||||| |||  |||||||||||||||||||    
T  17800800 aaaatcgaaaatgacctatattacaggag--taaagacctattaacccta 17800753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 653 - 694
Target Start/End: Complemental strand, 17289781 - 17289740
Alignment:
Q  653 aaatgacctatattacaagaggataaagacctattaacccta 694  Q
    |||||||||||||| || | ||||||||||||||||||||||    
T  17289781 aaatgacctatatttcagggggataaagacctattaacccta 17289740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 645 - 694
Target Start/End: Complemental strand, 44519503 - 44519455
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaacccta 694  Q
    |||| |||||||||||| ||||||| |||| |||||||||||||||||||    
T  44519503 aaaaccggaaatgacctctattacaggagg-taaagacctattaacccta 44519455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 4e-28; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 271 - 375
Target Start/End: Original strand, 20391897 - 20392001
Alignment:
Q  271 ggtttgggatgaatttgttgtgttgaattgagtttagcttgaagaagaaaggttgaaggttggattggtacataaacgaggtaatagctttgttgtgtag 370  Q
    |||||||||||||||||||||||||| |||||||||| |||| ||||||||| ||||||||||||||||| | |||  | |||||||||||| |||||||    
T  20391897 ggtttgggatgaatttgttgtgttgatttgagtttaggttgatgaagaaaggctgaaggttggattggtatagaaaacaagtaatagctttgctgtgtag 20391996  T
Q  371 atatg 375  Q
    |||||    
T  20391997 atatg 20392001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 276 - 339
Target Start/End: Original strand, 1171120 - 1171183
Alignment:
Q  276 gggatgaatttgttgtgttgaattgagtttagcttgaagaagaaaggttgaaggttggattggt 339  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  1171120 gggatgaatttgttgtgttgatttgagtttagcttgaagaagaaaggtagaaggttggattggt 1171183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 693 - 758
Target Start/End: Original strand, 1171492 - 1171557
Alignment:
Q  693 tatgttaaatgacatagttgtcacatggaggacatctgggaagcttaacacagtcagcaactgaca 758  Q
    ||||||||||  |||| ||| ||| |||||||||| ||||||||||||||||||||||||||||||    
T  1171492 tatgttaaatagcataattgccacgtggaggacatgtgggaagcttaacacagtcagcaactgaca 1171557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 700 - 761
Target Start/End: Original strand, 20393113 - 20393174
Alignment:
Q  700 aatgacatagttgtcacatggaggacatctgggaagcttaacacagtcagcaactgacatgt 761  Q
    |||| |||| ||| ||| |||||||||| |||||||||||||||||||||||||||||||||    
T  20393113 aatggcataattgccacgtggaggacatgtgggaagcttaacacagtcagcaactgacatgt 20393174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 590 - 649
Target Start/End: Original strand, 13114398 - 13114457
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattttcgatttttcacctgtaaaat 649  Q
    ||||||||||||||||||||| | |||||||| ||||||||| |||||| ||||||||||    
T  13114398 gggttaataggtctttaccccctgtaatataggtcattttcggtttttctcctgtaaaat 13114457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 646 - 694
Target Start/End: Original strand, 7922546 - 7922594
Alignment:
Q  646 aaatcggaaatgacctatattacaagaggataaagacctattaacccta 694  Q
    |||||| ||||||||||||||||| || |||||||||||||||||||||    
T  7922546 aaatcgaaaatgacctatattacaggatgataaagacctattaacccta 7922594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 592 - 636
Target Start/End: Original strand, 31116481 - 31116525
Alignment:
Q  592 gttaataggtctttaccccgtataatatagatcattttcgatttt 636  Q
    ||||||||||||||||||| | |||||||||||||||||||||||    
T  31116481 gttaataggtctttaccccctctaatatagatcattttcgatttt 31116525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 590 - 631
Target Start/End: Complemental strand, 22574087 - 22574046
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattttcg 631  Q
    ||||||||||||||||||||| | ||||||||||||||||||    
T  22574087 gggttaataggtctttaccccctgtaatatagatcattttcg 22574046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 645 - 694
Target Start/End: Original strand, 24062405 - 24062453
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaacccta 694  Q
    |||||| |||||||||||||||||| | ||||||||||||||||||||||    
T  24062405 aaaatcagaaatgacctatattacatg-ggataaagacctattaacccta 24062453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 645 - 691
Target Start/End: Original strand, 1319358 - 1319402
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaacc 691  Q
    |||||||||||| ||||||||||||  ||||||||||||||||||||    
T  1319358 aaaatcggaaatcacctatattaca--aggataaagacctattaacc 1319402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 590 - 629
Target Start/End: Original strand, 22573802 - 22573841
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcatttt 629  Q
    ||||||||||||||||||||| |||||||||| |||||||    
T  22573802 gggttaataggtctttaccccctataatataggtcatttt 22573841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 653 - 692
Target Start/End: Original strand, 25400796 - 25400835
Alignment:
Q  653 aaatgacctatattacaagaggataaagacctattaaccc 692  Q
    ||||||||||||||||||| || |||||||||||||||||    
T  25400796 aaatgacctatattacaagggggtaaagacctattaaccc 25400835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 591 - 649
Target Start/End: Original strand, 19325614 - 19325672
Alignment:
Q  591 ggttaataggtctttaccccgtataatatagatcattttcgatttttcacctgtaaaat 649  Q
    |||||||||||||||||||| | |||| |||||||||| || |||| | ||||||||||    
T  19325614 ggttaataggtctttaccccctgtaatttagatcatttccggttttccccctgtaaaat 19325672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 590 - 628
Target Start/End: Original strand, 24062167 - 24062205
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattt 628  Q
    ||||||||||||||||||||| |||||||||| ||||||    
T  24062167 gggttaataggtctttaccccctataatataggtcattt 24062205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 661 - 694
Target Start/End: Original strand, 10827247 - 10827280
Alignment:
Q  661 tatattacaagaggataaagacctattaacccta 694  Q
    ||||||||| ||||||||||||||||||||||||    
T  10827247 tatattacaggaggataaagacctattaacccta 10827280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 592 - 625
Target Start/End: Complemental strand, 16130517 - 16130484
Alignment:
Q  592 gttaataggtctttaccccgtataatatagatca 625  Q
    ||||||||||||||||||| ||||||||||||||    
T  16130517 gttaataggtctttaccccttataatatagatca 16130484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 3e-22; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 693 - 751
Target Start/End: Complemental strand, 22508956 - 22508898
Alignment:
Q  693 tatgttaaatgacatagttgtcacatggaggacatctgggaagcttaacacagtcagca 751  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22508956 tatgttaaatgacatagttgtcacatggaggacatgtgggaagcttaacacagtcagca 22508898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 592 - 649
Target Start/End: Original strand, 12766941 - 12766998
Alignment:
Q  592 gttaataggtctttaccccgtataatatagatcattttcgatttttcacctgtaaaat 649  Q
    ||||||||||||||||||| | |||||||||||||||||| |||||| ||||||||||    
T  12766941 gttaataggtctttaccccttgtaatatagatcattttcggtttttctcctgtaaaat 12766998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 590 - 649
Target Start/End: Complemental strand, 53806853 - 53806794
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattttcgatttttcacctgtaaaat 649  Q
    ||||||||||||||||||||| | |||||||| |||||||||||||| | ||| ||||||    
T  53806853 gggttaataggtctttaccccttgtaatataggtcattttcgattttccccctataaaat 53806794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 645 - 695
Target Start/End: Complemental strand, 30586209 - 30586159
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaaccctat 695  Q
    |||| |||||||||||||||||||| | || ||||||||||||||||||||    
T  30586209 aaaaccggaaatgacctatattacaggggggtaaagacctattaaccctat 30586159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 590 - 636
Target Start/End: Original strand, 49263029 - 49263075
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattttcgatttt 636  Q
    ||||||||||||||||||||| |||||||||||||| ||| ||||||    
T  49263029 gggttaataggtctttaccccctataatatagatcacttttgatttt 49263075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 645 - 694
Target Start/End: Complemental strand, 6510261 - 6510213
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaacccta 694  Q
    |||||||||||||||||||||||| || || |||||||||||||||||||    
T  6510261 aaaatcggaaatgacctatattac-agggggtaaagacctattaacccta 6510213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 650 - 695
Target Start/End: Complemental strand, 49880545 - 49880500
Alignment:
Q  650 cggaaatgacctatattacaagaggataaagacctattaaccctat 695  Q
    |||||||||||||||||| | | |||||||||||||||||||||||    
T  49880545 cggaaatgacctatattatagggggataaagacctattaaccctat 49880500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 652 - 693
Target Start/End: Original strand, 51252302 - 51252343
Alignment:
Q  652 gaaatgacctatattacaagaggataaagacctattaaccct 693  Q
    |||||||||||||||||| | |||||||||||||||||||||    
T  51252302 gaaatgacctatattacagggggataaagacctattaaccct 51252343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 645 - 693
Target Start/End: Complemental strand, 18465000 - 18464952
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaaccct 693  Q
    ||||||||||||||||||| ||||| | || ||||||||||||||||||    
T  18465000 aaaatcggaaatgacctattttacagggggctaaagacctattaaccct 18464952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 653 - 693
Target Start/End: Original strand, 19624029 - 19624068
Alignment:
Q  653 aaatgacctatattacaagaggataaagacctattaaccct 693  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  19624029 aaatgacctatattaca-gaggataaagacctattaaccct 19624068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 590 - 638
Target Start/End: Original strand, 20737510 - 20737558
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattttcgatttttc 638  Q
    |||||||||||| |||||||| |||||||||| |||||| |||||||||    
T  20737510 gggttaataggtttttaccccctataatataggtcatttccgatttttc 20737558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 421 - 469
Target Start/End: Complemental strand, 22509107 - 22509059
Alignment:
Q  421 taaaatttggggatgaacataaattaatttgttgatgaggatgaatgtt 469  Q
    ||||||| |||||||||||| ||||||||||||||||| ||||| ||||    
T  22509107 taaaattaggggatgaacatgaattaatttgttgatgaagatgagtgtt 22509059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 645 - 693
Target Start/End: Original strand, 53806807 - 53806854
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaaccct 693  Q
    ||||||| ||||||||||||||||||| || ||||||||||||||||||    
T  53806807 aaaatcgaaaatgacctatattacaag-gggtaaagacctattaaccct 53806854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 590 - 649
Target Start/End: Original strand, 6510215 - 6510273
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattttcgatttttcacctgtaaaat 649  Q
    ||||||||||||||||||||| | |||||||| |||||| ||| ||||| ||||||||||    
T  6510215 gggttaataggtctttaccccctgtaatataggtcatttccga-ttttcccctgtaaaat 6510273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 594 - 649
Target Start/End: Complemental strand, 12767219 - 12767164
Alignment:
Q  594 taataggtctttaccccgtataatatagatcattttcgatttttcacctgtaaaat 649  Q
    ||||||||||||||||| | |||||||| ||||||  |||||||| ||||||||||    
T  12767219 taataggtctttaccccttgtaatataggtcatttctgatttttcccctgtaaaat 12767164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 590 - 629
Target Start/End: Complemental strand, 40462800 - 40462761
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcatttt 629  Q
    ||||||||||||||||||||| |||||||||| |||||||    
T  40462800 gggttaataggtctttaccccatataatataggtcatttt 40462761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 645 - 692
Target Start/End: Original strand, 42349021 - 42349068
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaaccc 692  Q
    |||| |||||||||||||||||||| | || |||||||||||||||||    
T  42349021 aaaaccggaaatgacctatattacatggggctaaagacctattaaccc 42349068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 590 - 636
Target Start/End: Complemental strand, 47115619 - 47115573
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattttcgatttt 636  Q
    ||||||||||||||||||||| | |||||||| ||||||||| ||||    
T  47115619 gggttaataggtctttaccccctgtaatataggtcattttcggtttt 47115573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 645 - 694
Target Start/End: Original strand, 5205365 - 5205414
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaacccta 694  Q
    |||| |||||||||||||||||||| | || |||| ||||||||||||||    
T  5205365 aaaaccggaaatgacctatattacaggggggtaaaaacctattaacccta 5205414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 590 - 647
Target Start/End: Complemental strand, 49873006 - 49872949
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattttcgatttttcacctgtaaa 647  Q
    ||||||||||||||||||||| | |||||||| |||||| || |||| | ||||||||    
T  49873006 gggttaataggtctttaccccctgtaatataggtcatttccggttttccccctgtaaa 49872949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 645 - 694
Target Start/End: Original strand, 49872960 - 49873008
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaacccta 694  Q
    |||| ||||||||||||||||||| || || |||||||||||||||||||    
T  49872960 aaaaccggaaatgacctatattac-agggggtaaagacctattaacccta 49873008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 645 - 695
Target Start/End: Original strand, 22829348 - 22829398
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaaccctat 695  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  22829348 aaaatcggaaatgacttatattacaggaggataaagacctattaaccctat 22829398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 646 - 695
Target Start/End: Original strand, 18701798 - 18701847
Alignment:
Q  646 aaatcggaaatgacctatattacaagaggataaagacctattaaccctat 695  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||    
T  18701798 aaatcggaaatgacctatattacaagggggtaaagacctattaaccctat 18701847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 590 - 649
Target Start/End: Original strand, 12028198 - 12028257
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattttcgatttttcacctgtaaaat 649  Q
    |||||||||||||||||| || | |||||||| ||||||| |||||||| ||||||||||    
T  12028198 gggttaataggtctttacaccctgtaatataggtcatttttgatttttcccctgtaaaat 12028257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 590 - 649
Target Start/End: Complemental strand, 19493505 - 19493447
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattttcgatttttcacctgtaaaat 649  Q
    ||||||||||||||||||||| | |||||||| ||||||||| |||||| ||||||||||    
T  19493505 gggttaataggtctttaccccctgtaatataggtcattttcggtttttc-cctgtaaaat 19493447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 590 - 649
Target Start/End: Original strand, 22535454 - 22535513
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattttcgatttttcacctgtaaaat 649  Q
    ||||||||||||||||||||| | |||||||| ||||||||| |||||| | ||||||||    
T  22535454 gggttaataggtctttaccccctttaatataggtcattttcggtttttcccttgtaaaat 22535513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 656 - 695
Target Start/End: Complemental strand, 33868511 - 33868472
Alignment:
Q  656 tgacctatattacaagaggataaagacctattaaccctat 695  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  33868511 tgacctatattacaggaggataaagacctattaaccctat 33868472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 652 - 694
Target Start/End: Complemental strand, 25227863 - 25227821
Alignment:
Q  652 gaaatgacctatattacaagaggataaagacctattaacccta 694  Q
    |||||||||||||||||| |||| |||||||||||||||||||    
T  25227863 gaaatgacctatattacaggagggtaaagacctattaacccta 25227821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 645 - 690
Target Start/End: Complemental strand, 18665722 - 18665677
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaac 690  Q
    ||||||| ||||||||||||||||||| || |||||||||||||||    
T  18665722 aaaatcgaaaatgacctatattacaagggggtaaagacctattaac 18665677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 590 - 647
Target Start/End: Original strand, 22116155 - 22116212
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattttcgatttttcacctgtaaa 647  Q
    ||||||||||||||||||||| | |||||||| ||||||||| |||| | ||||||||    
T  22116155 gggttaataggtctttaccccctgtaatataggtcattttcggttttccccctgtaaa 22116212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 652 - 693
Target Start/End: Original strand, 25927139 - 25927179
Alignment:
Q  652 gaaatgacctatattacaagaggataaagacctattaaccct 693  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  25927139 gaaatgacctatattacaag-ggataaagacctattaaccct 25927179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 645 - 694
Target Start/End: Original strand, 34635953 - 34636002
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaacccta 694  Q
    |||| |||||||||||||||||||| | || |||||||||||||||||||    
T  34635953 aaaaccggaaatgacctatattacaggggggtaaagacctattaacccta 34636002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 653 - 693
Target Start/End: Complemental strand, 85478 - 85438
Alignment:
Q  653 aaatgacctatattacaagaggataaagacctattaaccct 693  Q
    ||||||||||||||||||| || ||||||||||||||||||    
T  85478 aaatgacctatattacaagggggtaaagacctattaaccct 85438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 652 - 691
Target Start/End: Complemental strand, 25926927 - 25926889
Alignment:
Q  652 gaaatgacctatattacaagaggataaagacctattaacc 691  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  25926927 gaaatgacctatattaca-gaggataaagacctattaacc 25926889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 590 - 649
Target Start/End: Original strand, 37200347 - 37200405
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattttcgatttttcacctgtaaaat 649  Q
    ||||||||||||||||||||| | |||||||| ||||||||| |||| | ||||||||||    
T  37200347 gggttaataggtctttacccc-tgtaatataggtcattttcggttttcctcctgtaaaat 37200405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 590 - 647
Target Start/End: Original strand, 85439 - 85497
Alignment:
Q  590 gggttaataggtcttta-ccccgtataatatagatcattttcgatttttcacctgtaaa 647  Q
    ||||||||||||||||| |||| | |||||||| ||||||||| |||||| ||||||||    
T  85439 gggttaataggtctttacccccttgtaatataggtcattttcggtttttcccctgtaaa 85497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 590 - 636
Target Start/End: Complemental strand, 85726 - 85681
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattttcgatttt 636  Q
    ||||||||||||||||||||| | |||||||| ||||||||||||||    
T  85726 gggttaataggtctttacccc-tgtaatataggtcattttcgatttt 85681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 645 - 695
Target Start/End: Complemental strand, 20182310 - 20182261
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaaccctat 695  Q
    ||||||| |||||||||||||||| || ||||||| |||||||||||||||    
T  20182310 aaaatcgaaaatgacctatattac-aggggataaaaacctattaaccctat 20182261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 591 - 649
Target Start/End: Original strand, 41089156 - 41089214
Alignment:
Q  591 ggttaataggtctttaccccgtataatatagatcattttcgatttttcacctgtaaaat 649  Q
    |||||||||||||||| ||  | |||||||| |||||||| ||||||| ||||||||||    
T  41089156 ggttaataggtctttaacctctgtaatataggtcattttcaatttttcccctgtaaaat 41089214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 590 - 647
Target Start/End: Original strand, 20182264 - 20182321
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattttcgatttttcacctgtaaa 647  Q
    |||||||||||| |||| ||| | |||||||| |||||||||||||| | ||||||||    
T  20182264 gggttaataggtttttatcccctgtaatataggtcattttcgattttccccctgtaaa 20182321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 590 - 631
Target Start/End: Original strand, 29835102 - 29835143
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattttcg 631  Q
    ||||||||||||||||||||| | |||||||| |||||||||    
T  29835102 gggttaataggtctttaccccctgtaatataggtcattttcg 29835143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 645 - 694
Target Start/End: Complemental strand, 34635752 - 34635704
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaacccta 694  Q
    |||| ||||||||||||||||||| || || |||||||||||||||||||    
T  34635752 aaaaccggaaatgacctatattac-agggggtaaagacctattaacccta 34635704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 645 - 694
Target Start/End: Complemental strand, 45464511 - 45464462
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaacccta 694  Q
    |||||| |||||||||||||||||    ||||||||||||||||||||||    
T  45464511 aaaatcagaaatgacctatattacttagggataaagacctattaacccta 45464462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000005; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 590 - 647
Target Start/End: Original strand, 27987297 - 27987354
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattttcgatttttcacctgtaaa 647  Q
    ||||||||||||||||||||| |||||||||| ||||||||| |||| | ||||||||    
T  27987297 gggttaataggtctttaccccctataatataggtcattttcggttttccccctgtaaa 27987354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 590 - 647
Target Start/End: Original strand, 28044599 - 28044656
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattttcgatttttcacctgtaaa 647  Q
    ||||||||||||||||||||| |||||||||| ||||||||| |||| | ||||||||    
T  28044599 gggttaataggtctttaccccctataatataggtcattttcggttttccccctgtaaa 28044656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 693 - 755
Target Start/End: Original strand, 36589226 - 36589288
Alignment:
Q  693 tatgttaaatgacatagttgtcacatggaggacatctgggaagcttaacacagtcagcaactg 755  Q
    |||||||||||| ||| ||| ||  |||||||||| |||| ||||||||||||||||||||||    
T  36589226 tatgttaaatgatataattgccatgtggaggacatgtgggcagcttaacacagtcagcaactg 36589288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 421 - 470
Target Start/End: Original strand, 36589077 - 36589126
Alignment:
Q  421 taaaatttggggatgaacataaattaatttgttgatgaggatgaatgttg 470  Q
    |||||||||||||||||||| ||| ||||||||||| | |||||||||||    
T  36589077 taaaatttggggatgaacatgaatgaatttgttgataaagatgaatgttg 36589126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 590 - 649
Target Start/End: Complemental strand, 24971235 - 24971175
Alignment:
Q  590 gggttaataggtctttaccccg-tataatatagatcattttcgatttttcacctgtaaaat 649  Q
    |||||||||||||||||||||  | ||||||||||||||| || |||||| ||||||||||    
T  24971235 gggttaataggtctttacccccctgtaatatagatcatttccggtttttcccctgtaaaat 24971175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 590 - 649
Target Start/End: Complemental strand, 960554 - 960495
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattttcgatttttcacctgtaaaat 649  Q
    ||||||||||||||||||||| | |||||||| |||||| || |||| | ||||||||||    
T  960554 gggttaataggtctttaccccctgtaatataggtcatttccggttttcctcctgtaaaat 960495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 590 - 649
Target Start/End: Complemental strand, 3912537 - 3912478
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattttcgatttttcacctgtaaaat 649  Q
    ||||||||| ||||||||||| | |||||||| ||||||||| |||| | ||||||||||    
T  3912537 gggttaataagtctttaccccctgtaatataggtcattttcggttttccccctgtaaaat 3912478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 653 - 695
Target Start/End: Complemental strand, 13567277 - 13567235
Alignment:
Q  653 aaatgacctatattacaagaggataaagacctattaaccctat 695  Q
    ||||||| ||||||||||| ||||||| |||||||||||||||    
T  13567277 aaatgacttatattacaaggggataaaaacctattaaccctat 13567235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 590 - 636
Target Start/End: Complemental strand, 14329657 - 14329611
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattttcgatttt 636  Q
    ||||||||||||||||||||| | |||||||| ||||||||| ||||    
T  14329657 gggttaataggtctttaccccctgtaatataggtcattttcggtttt 14329611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 590 - 628
Target Start/End: Complemental strand, 27987583 - 27987545
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattt 628  Q
    ||||||||||||||||||||| | |||||||||||||||    
T  27987583 gggttaataggtctttaccccctgtaatatagatcattt 27987545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 590 - 628
Target Start/End: Complemental strand, 28044885 - 28044847
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattt 628  Q
    ||||||||||||||||||||| | |||||||||||||||    
T  28044885 gggttaataggtctttaccccctgtaatatagatcattt 28044847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 645 - 695
Target Start/End: Original strand, 41565519 - 41565569
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaaccctat 695  Q
    |||| |||||||||||||||||||| | || ||| ||||||||||||||||    
T  41565519 aaaaccggaaatgacctatattacacgggggtaaggacctattaaccctat 41565569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 591 - 628
Target Start/End: Original strand, 2696455 - 2696492
Alignment:
Q  591 ggttaataggtctttaccccgtataatatagatcattt 628  Q
    |||||||||||||||||||| | |||||||||||||||    
T  2696455 ggttaataggtctttaccccttgtaatatagatcattt 2696492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 651 - 692
Target Start/End: Complemental strand, 43978606 - 43978565
Alignment:
Q  651 ggaaatgacctatattacaagaggataaagacctattaaccc 692  Q
    ||||||||||||||||||| | || |||||||||||||||||    
T  43978606 ggaaatgacctatattacacgggggtaaagacctattaaccc 43978565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000005; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 653 - 694
Target Start/End: Original strand, 29321326 - 29321367
Alignment:
Q  653 aaatgacctatattacaagaggataaagacctattaacccta 694  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  29321326 aaatgacctatattacatgaggataaagacctattaacccta 29321367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 642 - 694
Target Start/End: Original strand, 20076887 - 20076939
Alignment:
Q  642 tgtaaaatcggaaatgacctatattacaagaggataaagacctattaacccta 694  Q
    ||||||| ||||||||||||||||||||  ||| |||||||||||||||||||    
T  20076887 tgtaaaaccggaaatgacctatattacagaagggtaaagacctattaacccta 20076939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 646 - 692
Target Start/End: Original strand, 2870896 - 2870941
Alignment:
Q  646 aaatcggaaatgacctatattacaagaggataaagacctattaaccc 692  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||    
T  2870896 aaatcggaaatgacctatattacaggagg-taaagacctattaaccc 2870941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 645 - 695
Target Start/End: Original strand, 33659116 - 33659166
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaaccctat 695  Q
    |||| |||||||||||||||||||||| || |||| |||||||||||||||    
T  33659116 aaaaccggaaatgacctatattacaagggggtaaatacctattaaccctat 33659166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 421 - 470
Target Start/End: Original strand, 3937745 - 3937794
Alignment:
Q  421 taaaatttggggatgaacataaattaatttgttgatgaggatgaatgttg 470  Q
    |||||||||||||||||||| ||| ||||||||||| | |||||||||||    
T  3937745 taaaatttggggatgaacatgaatgaatttgttgataaagatgaatgttg 3937794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 590 - 649
Target Start/End: Original strand, 2870649 - 2870709
Alignment:
Q  590 gggttaataggtctttaccc-cgtataatatagatcattttcgatttttcacctgtaaaat 649  Q
    ||||||||||||||||| || | | |||||||||||||||||| |||||| ||||||||||    
T  2870649 gggttaataggtctttaacctcctgtaatatagatcattttcggtttttcccctgtaaaat 2870709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 645 - 693
Target Start/End: Complemental strand, 31861537 - 31861490
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaaccct 693  Q
    |||| |||||||||||||||||||| | |||||||||||||||||||||    
T  31861537 aaaaccggaaatgacctatattacagg-ggataaagacctattaaccct 31861490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 645 - 693
Target Start/End: Complemental strand, 39153463 - 39153415
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaaccct 693  Q
    |||| |||||||||||||||||||| | || ||||||||||||||||||    
T  39153463 aaaaccggaaatgacctatattacaggggggtaaagacctattaaccct 39153415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 590 - 649
Target Start/End: Complemental strand, 10976804 - 10976745
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattttcgatttttcacctgtaaaat 649  Q
    ||||||||||||||||||||| | |||||||| |||||| || |||| | ||||||||||    
T  10976804 gggttaataggtctttaccccctgtaatataggtcatttccggttttccccctgtaaaat 10976745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 645 - 692
Target Start/End: Original strand, 31861737 - 31861784
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaaccc 692  Q
    |||||| |||||||| ||||||||||| || |||||||||||||||||    
T  31861737 aaaatcagaaatgacatatattacaagggggtaaagacctattaaccc 31861784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 645 - 692
Target Start/End: Original strand, 36992994 - 36993040
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaaccc 692  Q
    |||| ||||||||||||||||||| ||||| |||||||||||||||||    
T  36992994 aaaaccggaaatgacctatattac-agagggtaaagacctattaaccc 36993040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 645 - 692
Target Start/End: Original strand, 39418962 - 39419009
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaaccc 692  Q
    |||| |||||||||||||||||||| | || |||||||||||||||||    
T  39418962 aaaaccggaaatgacctatattacaggggggtaaagacctattaaccc 39419009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 653 - 695
Target Start/End: Complemental strand, 711276 - 711234
Alignment:
Q  653 aaatgacctatattacaagaggataaagacctattaaccctat 695  Q
    ||||||||||||||||| | || ||||||||||||||||||||    
T  711276 aaatgacctatattacaggggggtaaagacctattaaccctat 711234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 645 - 695
Target Start/End: Original strand, 10976758 - 10976807
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaaccctat 695  Q
    |||| ||||||||||||||||||| || || ||||||||||||||||||||    
T  10976758 aaaaccggaaatgacctatattac-agggggtaaagacctattaaccctat 10976807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 645 - 691
Target Start/End: Original strand, 12383054 - 12383100
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaacc 691  Q
    ||||||| ||||||||||||||||| |||| ||||| ||||||||||    
T  12383054 aaaatcgaaaatgacctatattacaggagggtaaaggcctattaacc 12383100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 590 - 648
Target Start/End: Original strand, 33052817 - 33052875
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattttcgatttttcacctgtaaaa 648  Q
    ||||||||||||||||||||| | |||||||| |||||||  ||||| | |||||||||    
T  33052817 gggttaataggtctttaccccttgtaatataggtcattttttattttccccctgtaaaa 33052875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 645 - 691
Target Start/End: Complemental strand, 33658917 - 33658871
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaacc 691  Q
    |||| |||||||||||||||||||| | || ||||||||||||||||    
T  33658917 aaaaccggaaatgacctatattacaggggggtaaagacctattaacc 33658871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 653 - 694
Target Start/End: Original strand, 24098682 - 24098722
Alignment:
Q  653 aaatgacctatattacaagaggataaagacctattaacccta 694  Q
    ||||||||||||||||||| || |||||||||||||||||||    
T  24098682 aaatgacctatattacaag-ggctaaagacctattaacccta 24098722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 653 - 694
Target Start/End: Complemental strand, 33052855 - 33052815
Alignment:
Q  653 aaatgacctatattacaagaggataaagacctattaacccta 694  Q
    ||||||||||||||||||| || |||||||||||||||||||    
T  33052855 aaatgacctatattacaagggg-taaagacctattaacccta 33052815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000005; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 645 - 694
Target Start/End: Complemental strand, 13154626 - 13154577
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaacccta 694  Q
    ||||||||||||||||||||||| | | ||||||||||||||||||||||    
T  13154626 aaaatcggaaatgacctatattatagggggataaagacctattaacccta 13154577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 590 - 648
Target Start/End: Original strand, 24987608 - 24987666
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattttcgatttttcacctgtaaaa 648  Q
    ||||||||||||||||||||| | |||||||| |||||| || |||||| |||||||||    
T  24987608 gggttaataggtctttaccccctgtaatataggtcatttccggtttttcccctgtaaaa 24987666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 645 - 694
Target Start/End: Complemental strand, 50596045 - 50595998
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaacccta 694  Q
    |||||||||||||||||||||||||  ||| |||||||||||||||||||    
T  50596045 aaaatcggaaatgacctatattaca--agggtaaagacctattaacccta 50595998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 647 - 692
Target Start/End: Complemental strand, 5348207 - 5348163
Alignment:
Q  647 aatcggaaatgacctatattacaagaggataaagacctattaaccc 692  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||    
T  5348207 aatcggaaatgacctatattac-agagggtaaagacctattaaccc 5348163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 645 - 702
Target Start/End: Complemental strand, 24987654 - 24987598
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaaccctatgttaaat 702  Q
    |||| |||||||||||||||||||| | || |||||||||||||||||||| ||||||    
T  24987654 aaaaccggaaatgacctatattacaggggg-taaagacctattaaccctattttaaat 24987598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 645 - 694
Target Start/End: Complemental strand, 28410960 - 28410912
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaacccta 694  Q
    ||||||| ||||||||||||||||| | ||||||||||||||||||||||    
T  28410960 aaaatcgaaaatgacctatattacagg-ggataaagacctattaacccta 28410912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 653 - 694
Target Start/End: Complemental strand, 36343193 - 36343152
Alignment:
Q  653 aaatgacctatattacaagaggataaagacctattaacccta 694  Q
    ||||||||||||||||| |||| |||||||||||||||||||    
T  36343193 aaatgacctatattacaggagggtaaagacctattaacccta 36343152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 590 - 638
Target Start/End: Original strand, 28410914 - 28410962
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattttcgatttttc 638  Q
    ||||||||||||||||| ||| | |||||||| ||||||||||||||||    
T  28410914 gggttaataggtctttatcccctgtaatataggtcattttcgatttttc 28410962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 590 - 649
Target Start/End: Original strand, 9043448 - 9043507
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattttcgatttttcacctgtaaaat 649  Q
    |||||||||||||||||||   |||||||||  ||||||||| |||||| ||||||||||    
T  9043448 gggttaataggtctttacctgctataatatatgtcattttcggtttttcccctgtaaaat 9043507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 590 - 649
Target Start/End: Complemental strand, 18458859 - 18458800
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattttcgatttttcacctgtaaaat 649  Q
    ||||||||||||||||||||| | |||||||| |||||| || |||| | ||||||||||    
T  18458859 gggttaataggtctttaccccctgtaatataggtcatttccggttttcctcctgtaaaat 18458800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 645 - 692
Target Start/End: Original strand, 35034306 - 35034352
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaaccc 692  Q
    |||| ||||||||||||||||||| || ||||||||||||||||||||    
T  35034306 aaaaccggaaatgacctatattac-aggggataaagacctattaaccc 35034352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 645 - 692
Target Start/End: Original strand, 42736832 - 42736878
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaaccc 692  Q
    |||| ||||||||||||||||||| || ||||||||||||||||||||    
T  42736832 aaaaccggaaatgacctatattac-aggggataaagacctattaaccc 42736878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 593 - 647
Target Start/End: Original strand, 15336378 - 15336432
Alignment:
Q  593 ttaataggtctttaccccgtataatatagatcattttcgatttttcacctgtaaa 647  Q
    |||||||||||||||||| | |||||||| ||||||| | |||||| ||||||||    
T  15336378 ttaataggtctttaccccctgtaatataggtcatttttggtttttcccctgtaaa 15336432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 591 - 636
Target Start/End: Complemental strand, 2472640 - 2472595
Alignment:
Q  591 ggttaataggtctttaccccgtataatatagatcattttcgatttt 636  Q
    |||||||||||||||||||| | |||||||| | ||||||||||||    
T  2472640 ggttaataggtctttaccccctgtaatataggttattttcgatttt 2472595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 645 - 694
Target Start/End: Original strand, 5045965 - 5046013
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaacccta 694  Q
    ||||||||||||||||| ||||||| || ||||| |||||||||||||||    
T  5045965 aaaatcggaaatgacctgtattacagga-gataatgacctattaacccta 5046013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 652 - 693
Target Start/End: Original strand, 16699122 - 16699163
Alignment:
Q  652 gaaatgacctatattacaagaggataaagacctattaaccct 693  Q
    ||||||||||||||||| || || ||||||||||||||||||    
T  16699122 gaaatgacctatattaccagggggtaaagacctattaaccct 16699163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 645 - 694
Target Start/End: Original strand, 22604673 - 22604721
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaacccta 694  Q
    |||| ||||||||||||||||||| || || |||||||||||||||||||    
T  22604673 aaaaccggaaatgacctatattac-aggggttaaagacctattaacccta 22604721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 646 - 695
Target Start/End: Original strand, 34360256 - 34360305
Alignment:
Q  646 aaatcggaaatgacctatattacaagaggataaagacctattaaccctat 695  Q
    |||| ||||||||||||||||||| |  | ||||||||||||||||||||    
T  34360256 aaattggaaatgacctatattacagggaggtaaagacctattaaccctat 34360305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 645 - 694
Target Start/End: Complemental strand, 42736661 - 42736612
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaacccta 694  Q
    |||||| |||||||||||||||||| | || ||||||| |||||||||||    
T  42736661 aaaatcagaaatgacctatattacaggggggtaaagacttattaacccta 42736612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 653 - 698
Target Start/End: Complemental strand, 44200365 - 44200321
Alignment:
Q  653 aaatgacctatattacaagaggataaagacctattaaccctatgtt 698  Q
    ||||| ||||||||||||| || |||||||||||||||||||||||    
T  44200365 aaatggcctatattacaagggg-taaagacctattaaccctatgtt 44200321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 656 - 693
Target Start/End: Original strand, 50105418 - 50105455
Alignment:
Q  656 tgacctatattacaagaggataaagacctattaaccct 693  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  50105418 tgacctatattacaggagggtaaagacctattaaccct 50105455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0769 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: scaffold0769
Description:

Target: scaffold0769; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 645 - 694
Target Start/End: Complemental strand, 3961 - 3912
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaacccta 694  Q
    |||| |||||||||||||||||||| | || |||||||||||||||||||    
T  3961 aaaaccggaaatgacctatattacaggggggtaaagacctattaacccta 3912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0769; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 645 - 694
Target Start/End: Original strand, 4162 - 4210
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaacccta 694  Q
    |||| ||||||||||||||||||| || || |||||||||||||||||||    
T  4162 aaaaccggaaatgacctatattac-agggggtaaagacctattaacccta 4210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 652 - 693
Target Start/End: Original strand, 1160 - 1200
Alignment:
Q  652 gaaatgacctatattacaagaggataaagacctattaaccct 693  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  1160 gaaatgacctatattacaag-ggataaagacctattaaccct 1200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 652 - 691
Target Start/End: Complemental strand, 875 - 837
Alignment:
Q  652 gaaatgacctatattacaagaggataaagacctattaacc 691  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  875 gaaatgacctatattaca-gaggataaagacctattaacc 837  T

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Target: scaffold0142 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 645 - 693
Target Start/End: Complemental strand, 34616 - 34568
Alignment:
Q  645 aaaatcggaaatgacctatattacaagaggataaagacctattaaccct 693  Q
    |||| |||||||||||||||||||||  || ||||||||||||||||||    
T  34616 aaaaccggaaatgacctatattacaaaggggtaaagacctattaaccct 34568  T

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Target: scaffold0079 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 653 - 693
Target Start/End: Complemental strand, 6849 - 6809
Alignment:
Q  653 aaatgacctatattacaagaggataaagacctattaaccct 693  Q
    ||||||||||||||||| | |||||||||||||||||||||    
T  6849 aaatgacctatattacagggggataaagacctattaaccct 6809  T

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Target: scaffold0050 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 643 - 690
Target Start/End: Original strand, 4945 - 4991
Alignment:
Q  643 gtaaaatcggaaatgacctatattacaagaggataaagacctattaac 690  Q
    ||||||||||||||||||||||||||| |||| ||||||| |||||||    
T  4945 gtaaaatcggaaatgacctatattacaggagg-taaagacatattaac 4991  T

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Target: scaffold0809 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 591 - 629
Target Start/End: Complemental strand, 4053 - 4015
Alignment:
Q  591 ggttaataggtctttaccccgtataatatagatcatttt 629  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  4053 ggttaataggtctttaccccctgtaatatagatcatttt 4015  T

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Target: scaffold0010 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 590 - 636
Target Start/End: Original strand, 26308 - 26354
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattttcgatttt 636  Q
    ||||||||||||||||||||| | |||||||| ||||||||| ||||    
T  26308 gggttaataggtctttaccccctgtaatataggtcattttcggtttt 26354  T

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Target: scaffold0384 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 590 - 631
Target Start/End: Complemental strand, 4484 - 4443
Alignment:
Q  590 gggttaataggtctttaccccgtataatatagatcattttcg 631  Q
    ||||||||||||||||||||| | |||||||| |||||||||    
T  4484 gggttaataggtctttaccccctgtaatataggtcattttcg 4443  T

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Target: scaffold0136 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 653 - 694
Target Start/End: Original strand, 655 - 695
Alignment:
Q  653 aaatgacctatattacaagaggataaagacctattaacccta 694  Q
    ||||||||||||||||| |||| |||||||||||||||||||    
T  655 aaatgacctatattaca-gagggtaaagacctattaacccta 695  T

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Target: scaffold0031 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 652 - 693
Target Start/End: Original strand, 2077 - 2118
Alignment:
Q  652 gaaatgacctatattacaagaggataaagacctattaaccct 693  Q
    |||||||||||||||||| | || ||||||||||||||||||    
T  2077 gaaatgacctatattacaggggggtaaagacctattaaccct 2118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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