View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11739_high_17 (Length: 239)
Name: NF11739_high_17
Description: NF11739
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11739_high_17 |
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Alignment Details
Target: chr1 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 6033783 - 6033924
Alignment:
| Q |
1 |
ccttcaatcttcttcttctgcaaattaatgtgtatctgcaaaatttgcattttttgttgttgtaatttgtatgaattaataatggtttttcagcttattt |
100 |
Q |
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| T |
6033783 |
ccttcaatcttcttcttctgcaaattaatgtgtatctgcaaaatttgcattttttgttgttgtaatttgtatgaattaataatggtttttcagcttattt |
6033882 |
T |
|
| Q |
101 |
gtaattaattcgtgcaatgcaatatcacatttttactccttt |
142 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
6033883 |
gtaattaattcgtgcaatgcaatatcacatttttactccttt |
6033924 |
T |
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