View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11739_high_4 (Length: 457)

Name: NF11739_high_4
Description: NF11739
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11739_high_4
NF11739_high_4
[»] chr6 (48 HSPs)
chr6 (1-302)||(6911577-6911870)
chr6 (318-434)||(24663513-24663629)
chr6 (315-434)||(3621724-3621843)
chr6 (315-434)||(1751419-1751538)
chr6 (315-434)||(3850454-3850573)
chr6 (315-434)||(17123973-17124092)
chr6 (315-434)||(22050182-22050301)
chr6 (315-420)||(364530-364635)
chr6 (318-434)||(17836027-17836143)
chr6 (325-427)||(23923711-23923813)
chr6 (318-434)||(12732309-12732425)
chr6 (327-434)||(373857-373964)
chr6 (315-434)||(17193292-17193411)
chr6 (325-434)||(26470721-26470830)
chr6 (317-434)||(1252300-1252417)
chr6 (326-434)||(8176567-8176675)
chr6 (310-434)||(30416058-30416182)
chr6 (315-427)||(32359428-32359540)
chr6 (325-434)||(8992682-8992792)
chr6 (325-434)||(9017129-9017239)
chr6 (310-402)||(30388932-30389024)
chr6 (315-434)||(23777430-23777549)
chr6 (315-434)||(26485673-26485792)
chr6 (320-434)||(7632030-7632144)
chr6 (318-434)||(24356045-24356161)
chr6 (315-434)||(17251243-17251363)
chr6 (318-434)||(22784659-22784775)
chr6 (318-434)||(31244740-31244856)
chr6 (315-422)||(24949253-24949360)
chr6 (315-400)||(53798-53884)
chr6 (315-424)||(7056128-7056237)
chr6 (315-434)||(9838110-9838229)
chr6 (315-434)||(11128965-11129084)
chr6 (326-434)||(11676614-11676722)
chr6 (315-399)||(17601121-17601205)
chr6 (315-427)||(34607239-34607351)
chr6 (388-434)||(30388855-30388901)
chr6 (315-418)||(11431145-11431248)
chr6 (326-418)||(19645721-19645815)
chr6 (311-418)||(24635858-24635965)
chr6 (321-434)||(32250946-32251058)
chr6 (315-434)||(33260834-33260958)
chr6 (315-427)||(34730701-34730812)
chr6 (315-434)||(22400552-22400671)
chr6 (380-434)||(7235574-7235628)
chr6 (423-457)||(21215792-21215826)
chr6 (328-417)||(1924003-1924092)
chr6 (424-456)||(352943-352975)
[»] scaffold0242 (2 HSPs)
scaffold0242 (1-242)||(15206-15451)
scaffold0242 (1-242)||(24041-24286)
[»] chr4 (105 HSPs)
chr4 (310-434)||(44069168-44069292)
chr4 (315-434)||(44013901-44014020)
chr4 (315-434)||(8735526-8735645)
chr4 (315-434)||(44217843-44217962)
chr4 (317-434)||(26620341-26620458)
chr4 (315-434)||(16464770-16464889)
chr4 (315-434)||(21044736-21044854)
chr4 (315-434)||(39671462-39671581)
chr4 (315-434)||(53599774-53599893)
chr4 (315-434)||(56576092-56576211)
chr4 (326-434)||(35232297-35232405)
chr4 (315-434)||(38617297-38617414)
chr4 (326-434)||(48782336-48782444)
chr4 (315-434)||(5374338-5374457)
chr4 (315-434)||(13629181-13629300)
chr4 (331-434)||(16664378-16664481)
chr4 (315-434)||(22828389-22828508)
chr4 (315-434)||(35231827-35231946)
chr4 (325-427)||(36408867-36408969)
chr4 (325-427)||(36423033-36423135)
chr4 (320-434)||(46872058-46872172)
chr4 (318-434)||(23237767-23237883)
chr4 (315-434)||(22678297-22678416)
chr4 (315-434)||(33755019-33755138)
chr4 (326-433)||(50623551-50623658)
chr4 (326-434)||(3436066-3436174)
chr4 (316-432)||(19527209-19527325)
chr4 (322-434)||(31984147-31984259)
chr4 (310-434)||(39683697-39683821)
chr4 (315-434)||(54231676-54231795)
chr4 (310-434)||(42099845-42099969)
chr4 (315-434)||(42513013-42513133)
chr4 (315-434)||(12252229-12252348)
chr4 (315-434)||(19093141-19093260)
chr4 (315-434)||(52061695-52061814)
chr4 (321-434)||(29295491-29295604)
chr4 (317-434)||(34464414-34464531)
chr4 (310-434)||(6195161-6195285)
chr4 (326-434)||(26906388-26906496)
chr4 (315-434)||(47251550-47251669)
chr4 (318-434)||(33084615-33084726)
chr4 (315-434)||(354103-354222)
chr4 (329-434)||(53125240-53125345)
chr4 (328-428)||(47884988-47885088)
chr4 (317-433)||(55703058-55703174)
chr4 (310-388)||(9834463-9834541)
chr4 (325-434)||(38542274-38542383)
chr4 (323-434)||(8741615-8741731)
chr4 (317-434)||(31861976-31862093)
chr4 (315-434)||(55147048-55147168)
chr4 (327-434)||(37502159-37502266)
chr4 (324-434)||(42645398-42645508)
chr4 (315-389)||(52677154-52677228)
chr4 (322-434)||(18135045-18135158)
chr4 (322-434)||(49122255-49122368)
chr4 (315-434)||(44176577-44176696)
chr4 (315-434)||(23719772-23719891)
chr4 (315-430)||(36659415-36659530)
chr4 (380-434)||(23621905-23621959)
chr4 (365-415)||(32239552-32239602)
chr4 (315-397)||(33809261-33809343)
chr4 (366-434)||(47093949-47094017)
chr4 (318-434)||(47596604-47596720)
chr4 (315-434)||(30939292-30939411)
chr4 (315-434)||(31369938-31370057)
chr4 (327-434)||(44549780-44549887)
chr4 (325-427)||(26933770-26933872)
chr4 (328-434)||(40412080-40412186)
chr4 (315-424)||(9220029-9220138)
chr4 (325-400)||(29832358-29832433)
chr4 (315-418)||(47751683-47751786)
chr4 (310-424)||(49089053-49089167)
chr4 (329-427)||(18781623-18781721)
chr4 (315-397)||(42133211-42133293)
chr4 (320-372)||(7243005-7243058)
chr4 (315-363)||(38009754-38009802)
chr4 (315-434)||(43888119-43888237)
chr4 (315-399)||(45725708-45725792)
chr4 (342-434)||(52057466-52057558)
chr4 (317-372)||(33751333-33751388)
chr4 (322-434)||(35381414-35381522)
chr4 (315-397)||(3036557-3036639)
chr4 (315-417)||(29511197-29511299)
chr4 (315-372)||(38027563-38027620)
chr4 (386-434)||(4201377-4201425)
chr4 (326-390)||(42629498-42629562)
chr4 (386-434)||(47428666-47428714)
chr4 (316-363)||(8456900-8456947)
chr4 (315-390)||(17698643-17698718)
chr4 (315-418)||(19399686-19399789)
chr4 (315-354)||(36408969-36409008)
chr4 (315-354)||(36423135-36423174)
chr4 (315-354)||(52257779-52257818)
chr4 (321-368)||(56499606-56499653)
chr4 (424-457)||(5519272-5519305)
chr4 (317-354)||(34361707-34361744)
chr4 (316-365)||(51654862-51654911)
chr4 (424-457)||(55811547-55811580)
chr4 (425-457)||(5496951-5496983)
chr4 (429-457)||(27285535-27285563)
chr4 (429-457)||(28426799-28426827)
chr4 (429-457)||(36703887-36703915)
chr4 (318-354)||(47428736-47428772)
chr4 (429-457)||(49332427-49332455)
chr4 (425-457)||(55938039-55938071)
[»] chr5 (83 HSPs)
chr5 (318-434)||(10359222-10359338)
chr5 (310-434)||(38910389-38910513)
chr5 (315-434)||(39073160-39073279)
chr5 (310-434)||(8825173-8825297)
chr5 (315-434)||(2673962-2674081)
chr5 (318-432)||(18020755-18020869)
chr5 (320-434)||(26854084-26854198)
chr5 (318-434)||(6754166-6754282)
chr5 (315-434)||(7579651-7579771)
chr5 (315-434)||(1087917-1088036)
chr5 (315-434)||(4175464-4175583)
chr5 (320-434)||(38702257-38702371)
chr5 (317-434)||(4098447-4098564)
chr5 (326-434)||(24074833-24074941)
chr5 (326-434)||(38017272-38017380)
chr5 (315-434)||(9076187-9076306)
chr5 (315-434)||(12664974-12665093)
chr5 (315-434)||(12869883-12870002)
chr5 (315-434)||(25344076-25344195)
chr5 (315-434)||(34261428-34261547)
chr5 (315-434)||(38363305-38363424)
chr5 (310-434)||(6072568-6072692)
chr5 (315-434)||(4985159-4985278)
chr5 (315-434)||(18794899-18795018)
chr5 (315-434)||(28024243-28024362)
chr5 (317-434)||(28446971-28447088)
chr5 (318-434)||(7403968-7404084)
chr5 (315-434)||(14793774-14793893)
chr5 (320-434)||(42911666-42911780)
chr5 (315-434)||(22582588-22582706)
chr5 (310-434)||(1297716-1297841)
chr5 (317-434)||(36239574-36239691)
chr5 (317-434)||(40198904-40199021)
chr5 (315-434)||(9127335-9127454)
chr5 (315-434)||(16124244-16124363)
chr5 (315-418)||(18465829-18465932)
chr5 (332-423)||(31546000-31546091)
chr5 (310-429)||(38502783-38502902)
chr5 (318-434)||(6689715-6689831)
chr5 (315-434)||(2133892-2134009)
chr5 (315-434)||(8229788-8229906)
chr5 (315-433)||(18437307-18437425)
chr5 (325-434)||(4017530-4017639)
chr5 (318-434)||(39893796-39893912)
chr5 (315-434)||(7408447-7408566)
chr5 (317-434)||(5119294-5119411)
chr5 (318-434)||(25027562-25027678)
chr5 (315-434)||(3686806-3686925)
chr5 (315-385)||(10889172-10889242)
chr5 (315-423)||(4427389-4427498)
chr5 (310-434)||(37809875-37809999)
chr5 (315-434)||(12784427-12784545)
chr5 (317-400)||(38297511-38297594)
chr5 (328-434)||(32389102-32389208)
chr5 (341-434)||(4694880-4694973)
chr5 (315-434)||(6007999-6008120)
chr5 (326-434)||(30368130-30368238)
chr5 (322-434)||(37306690-37306802)
chr5 (315-434)||(12722943-12723062)
chr5 (315-434)||(31803440-31803559)
chr5 (321-418)||(7834055-7834155)
chr5 (326-434)||(4962183-4962289)
chr5 (315-392)||(18000491-18000567)
chr5 (325-434)||(37633792-37633901)
chr5 (318-397)||(5842980-5843059)
chr5 (316-399)||(26906641-26906724)
chr5 (326-433)||(9958878-9958985)
chr5 (315-434)||(28463369-28463488)
chr5 (315-418)||(38308110-38308213)
chr5 (349-434)||(19831560-19831645)
chr5 (326-427)||(24229071-24229172)
chr5 (325-434)||(37303101-37303210)
chr5 (310-418)||(1795096-1795204)
chr5 (320-352)||(4688810-4688842)
chr5 (320-372)||(13461188-13461240)
chr5 (317-397)||(13703250-13703330)
chr5 (314-369)||(31803118-31803173)
chr5 (316-367)||(36481258-36481309)
chr5 (380-434)||(31802904-31802958)
chr5 (424-457)||(4843077-4843110)
chr5 (325-397)||(12637941-12638013)
chr5 (425-457)||(27307692-27307724)
chr5 (429-457)||(43447434-43447462)
[»] chr2 (59 HSPs)
chr2 (318-434)||(14308527-14308643)
chr2 (315-434)||(10812333-10812452)
chr2 (315-434)||(26342714-26342833)
chr2 (310-434)||(30264587-30264711)
chr2 (315-434)||(3363718-3363837)
chr2 (315-434)||(15182991-15183110)
chr2 (315-434)||(15893570-15893689)
chr2 (315-434)||(36375707-36375826)
chr2 (325-434)||(14295757-14295866)
chr2 (315-434)||(34399336-34399455)
chr2 (315-434)||(41885759-41885878)
chr2 (315-434)||(19594484-19594603)
chr2 (315-434)||(44360567-44360686)
chr2 (326-434)||(478974-479082)
chr2 (316-434)||(37093584-37093701)
chr2 (315-434)||(10263891-10264009)
chr2 (315-434)||(34357312-34357431)
chr2 (315-434)||(25558176-25558295)
chr2 (318-434)||(14288565-14288679)
chr2 (310-420)||(1259614-1259724)
chr2 (315-405)||(38072222-38072312)
chr2 (325-434)||(11560047-11560156)
chr2 (315-434)||(3376267-3376386)
chr2 (315-434)||(11222306-11222425)
chr2 (320-434)||(38186048-38186161)
chr2 (315-434)||(4654853-4654972)
chr2 (315-434)||(13965741-13965860)
chr2 (326-409)||(14284243-14284325)
chr2 (327-434)||(15677298-15677400)
chr2 (320-434)||(28145566-28145681)
chr2 (315-433)||(35158341-35158459)
chr2 (325-434)||(4883737-4883846)
chr2 (319-432)||(9706923-9707036)
chr2 (326-434)||(36404842-36404950)
chr2 (315-434)||(31011708-31011826)
chr2 (318-434)||(13754089-13754205)
chr2 (322-434)||(9370108-9370220)
chr2 (315-434)||(13215527-13215646)
chr2 (320-434)||(14541465-14541579)
chr2 (315-418)||(34262812-34262915)
chr2 (334-434)||(34884547-34884647)
chr2 (315-434)||(43077426-43077545)
chr2 (315-372)||(8443874-8443931)
chr2 (326-434)||(13000912-13001020)
chr2 (315-434)||(13849705-13849824)
chr2 (319-434)||(4952690-4952805)
chr2 (326-367)||(36173260-36173301)
chr2 (316-368)||(25787527-25787579)
chr2 (318-397)||(25186823-25186902)
chr2 (428-457)||(31901176-31901205)
chr2 (316-365)||(33947420-33947469)
chr2 (369-434)||(36824525-36824590)
chr2 (429-457)||(14786479-14786507)
chr2 (425-457)||(29387376-29387408)
chr2 (315-434)||(32854772-32854889)
chr2 (425-457)||(32919105-32919137)
chr2 (317-397)||(37116595-37116675)
chr2 (429-457)||(39545799-39545827)
chr2 (429-457)||(41246099-41246127)
[»] chr1 (80 HSPs)
chr1 (310-434)||(43500640-43500764)
chr1 (315-432)||(35531279-35531396)
chr1 (315-434)||(13566813-13566932)
chr1 (310-432)||(38648593-38648715)
chr1 (318-434)||(8464244-8464360)
chr1 (310-434)||(12231050-12231174)
chr1 (326-434)||(45368222-45368330)
chr1 (315-434)||(1024690-1024809)
chr1 (315-434)||(29830887-29831006)
chr1 (325-434)||(19349373-19349482)
chr1 (315-434)||(30686545-30686664)
chr1 (315-434)||(35483765-35483884)
chr1 (326-434)||(20605619-20605727)
chr1 (315-434)||(37437037-37437156)
chr1 (318-434)||(21927685-21927799)
chr1 (310-434)||(1429418-1429542)
chr1 (315-434)||(1677332-1677451)
chr1 (325-434)||(7783084-7783193)
chr1 (315-434)||(2059796-2059915)
chr1 (315-434)||(13507904-13508023)
chr1 (315-434)||(13515092-13515211)
chr1 (317-434)||(37609290-37609404)
chr1 (315-434)||(50825557-50825675)
chr1 (315-434)||(18033810-18033929)
chr1 (322-434)||(45226568-45226680)
chr1 (315-434)||(19929450-19929569)
chr1 (315-434)||(12124778-12124897)
chr1 (315-426)||(40926737-40926848)
chr1 (320-434)||(39412500-39412614)
chr1 (310-434)||(32994449-32994572)
chr1 (317-433)||(44182894-44183009)
chr1 (318-434)||(49497286-49497402)
chr1 (326-433)||(31588735-31588842)
chr1 (317-434)||(13699308-13699425)
chr1 (322-434)||(28679155-28679267)
chr1 (314-434)||(35255620-35255740)
chr1 (315-434)||(31487763-31487882)
chr1 (315-434)||(51974155-51974274)
chr1 (318-427)||(49908166-49908278)
chr1 (325-434)||(9127803-9127912)
chr1 (326-434)||(52749149-52749257)
chr1 (319-434)||(48508267-48508382)
chr1 (325-433)||(30702284-30702392)
chr1 (326-434)||(51972276-51972384)
chr1 (315-434)||(10676036-10676155)
chr1 (315-434)||(32168296-32168415)
chr1 (315-434)||(51613545-51613664)
chr1 (318-397)||(5598216-5598295)
chr1 (315-434)||(32348112-32348230)
chr1 (315-434)||(36318486-36318605)
chr1 (329-434)||(43952922-43953017)
chr1 (310-397)||(37735118-37735205)
chr1 (377-434)||(44818588-44818645)
chr1 (325-397)||(42800277-42800349)
chr1 (311-399)||(52649709-52649797)
chr1 (315-434)||(35700359-35700478)
chr1 (310-434)||(12721574-12721698)
chr1 (325-457)||(45230629-45230760)
chr1 (315-434)||(4100893-4101012)
chr1 (318-397)||(33720688-33720767)
chr1 (320-434)||(10506945-10507059)
chr1 (315-433)||(18344461-18344579)
chr1 (320-434)||(35605732-35605846)
chr1 (317-434)||(43809038-43809155)
chr1 (318-434)||(31570624-31570740)
chr1 (315-363)||(48264760-48264808)
chr1 (315-434)||(17013560-17013679)
chr1 (341-414)||(19455410-19455482)
chr1 (325-434)||(38597725-38597834)
chr1 (425-457)||(8785783-8785815)
chr1 (424-457)||(10556078-10556111)
chr1 (428-457)||(20165835-20165864)
chr1 (315-372)||(42787137-42787194)
chr1 (428-457)||(49580393-49580422)
chr1 (428-456)||(13014735-13014763)
chr1 (429-457)||(15369476-15369504)
chr1 (428-456)||(20754792-20754820)
chr1 (429-457)||(31683335-31683363)
chr1 (320-392)||(36850813-36850885)
chr1 (382-434)||(48265087-48265139)
[»] chr8 (78 HSPs)
chr8 (315-434)||(35052187-35052306)
chr8 (315-434)||(34981963-34982082)
chr8 (315-434)||(38482779-38482898)
chr8 (315-434)||(38128534-38128653)
chr8 (318-434)||(11994015-11994131)
chr8 (315-434)||(39303502-39303622)
chr8 (315-434)||(14228309-14228428)
chr8 (315-434)||(33935047-33935166)
chr8 (317-434)||(14263678-14263795)
chr8 (318-434)||(16656834-16656950)
chr8 (315-434)||(23430043-23430162)
chr8 (315-434)||(25703565-25703684)
chr8 (315-434)||(25812736-25812855)
chr8 (315-434)||(26062841-26062960)
chr8 (325-434)||(40228429-40228538)
chr8 (322-434)||(1202438-1202550)
chr8 (325-434)||(4057422-4057531)
chr8 (325-434)||(34046985-34047094)
chr8 (317-434)||(45281367-45281484)
chr8 (315-434)||(23848543-23848662)
chr8 (315-434)||(15596478-15596597)
chr8 (325-434)||(9954783-9954892)
chr8 (318-434)||(1245446-1245562)
chr8 (315-434)||(41308029-41308149)
chr8 (315-434)||(8453223-8453342)
chr8 (315-434)||(18291597-18291716)
chr8 (325-427)||(43641986-43642088)
chr8 (317-417)||(13328121-13328221)
chr8 (311-434)||(43553173-43553296)
chr8 (318-434)||(10180504-10180620)
chr8 (326-434)||(32010082-32010190)
chr8 (315-434)||(2456102-2456221)
chr8 (315-434)||(12342601-12342720)
chr8 (315-434)||(17074569-17074688)
chr8 (315-434)||(17573582-17573701)
chr8 (315-434)||(18842663-18842782)
chr8 (317-434)||(21651735-21651852)
chr8 (315-434)||(2888455-2888574)
chr8 (317-434)||(36058366-36058483)
chr8 (315-434)||(8554003-8554122)
chr8 (315-418)||(14061136-14061239)
chr8 (315-434)||(23855691-23855810)
chr8 (315-434)||(12248757-12248876)
chr8 (315-434)||(26740124-26740243)
chr8 (315-427)||(17313283-17313395)
chr8 (326-434)||(27518711-27518819)
chr8 (346-434)||(40603869-40603957)
chr8 (367-434)||(3513491-3513558)
chr8 (318-433)||(8672629-8672744)
chr8 (371-434)||(9808017-9808080)
chr8 (315-434)||(39615440-39615558)
chr8 (341-434)||(7605912-7606005)
chr8 (325-434)||(33314678-33314787)
chr8 (317-413)||(11707443-11707539)
chr8 (326-434)||(14511428-14511536)
chr8 (315-434)||(36111930-36112047)
chr8 (315-434)||(27911659-27911778)
chr8 (315-434)||(27958078-27958197)
chr8 (317-434)||(3720814-3720931)
chr8 (317-399)||(31964738-31964820)
chr8 (316-434)||(42352872-42352989)
chr8 (381-434)||(15623664-15623717)
chr8 (381-434)||(15647452-15647505)
chr8 (326-391)||(29091083-29091148)
chr8 (316-372)||(13174125-13174181)
chr8 (350-434)||(17718637-17718721)
chr8 (319-363)||(45317857-45317901)
chr8 (315-418)||(19972429-19972532)
chr8 (315-418)||(21020301-21020404)
chr8 (325-363)||(6661158-6661196)
chr8 (325-363)||(6741560-6741598)
chr8 (423-457)||(10409466-10409500)
chr8 (310-347)||(3305288-3305325)
chr8 (317-434)||(41643479-41643596)
chr8 (424-457)||(42148918-42148951)
chr8 (319-363)||(40608243-40608287)
chr8 (429-457)||(42309438-42309466)
chr8 (429-457)||(45434962-45434990)
[»] scaffold0024 (3 HSPs)
scaffold0024 (318-434)||(49280-49396)
scaffold0024 (326-378)||(89360-89412)
scaffold0024 (153-226)||(158214-158287)
[»] chr3 (73 HSPs)
chr3 (318-434)||(53745278-53745394)
chr3 (315-434)||(27992374-27992493)
chr3 (315-434)||(34266433-34266552)
chr3 (315-434)||(43554523-43554642)
chr3 (310-434)||(29651802-29651926)
chr3 (315-434)||(790684-790803)
chr3 (325-434)||(54898089-54898198)
chr3 (310-434)||(45101346-45101470)
chr3 (318-434)||(46973557-46973673)
chr3 (318-418)||(47069853-47069953)
chr3 (319-434)||(6902412-6902527)
chr3 (319-434)||(19550380-19550495)
chr3 (315-434)||(54106397-54106516)
chr3 (315-423)||(29698136-29698244)
chr3 (317-434)||(52663576-52663693)
chr3 (326-434)||(24981424-24981532)
chr3 (315-434)||(29803782-29803901)
chr3 (315-432)||(51219086-51219206)
chr3 (330-434)||(51697571-51697676)
chr3 (310-434)||(42671878-42672002)
chr3 (315-434)||(43945513-43945632)
chr3 (325-434)||(32980774-32980883)
chr3 (317-434)||(35315266-35315383)
chr3 (310-434)||(27483776-27483900)
chr3 (315-434)||(13158432-13158551)
chr3 (315-434)||(33491132-33491251)
chr3 (315-434)||(51244758-51244877)
chr3 (317-434)||(52627233-52627350)
chr3 (323-434)||(39866850-39866961)
chr3 (315-434)||(43775383-43775502)
chr3 (346-434)||(40139858-40139946)
chr3 (326-407)||(41168916-41169000)
chr3 (315-434)||(49123657-49123775)
chr3 (322-434)||(54911302-54911413)
chr3 (315-434)||(20848717-20848836)
chr3 (315-434)||(41425763-41425882)
chr3 (315-434)||(45145262-45145381)
chr3 (320-434)||(33074276-33074390)
chr3 (326-434)||(17102888-17102996)
chr3 (326-434)||(29458207-29458315)
chr3 (315-434)||(41926812-41926933)
chr3 (315-434)||(3643189-3643308)
chr3 (318-434)||(36234501-36234614)
chr3 (310-434)||(33874534-33874658)
chr3 (326-434)||(28885812-28885919)
chr3 (315-434)||(40318921-40319040)
chr3 (318-385)||(45513314-45513381)
chr3 (315-388)||(7329004-7329077)
chr3 (325-434)||(32853363-32853472)
chr3 (326-434)||(25983667-25983774)
chr3 (315-434)||(41351187-41351306)
chr3 (318-380)||(13168193-13168255)
chr3 (380-434)||(45513673-45513727)
chr3 (325-434)||(24067-24176)
chr3 (325-434)||(3376307-3376416)
chr3 (317-434)||(47104150-47104267)
chr3 (325-418)||(48214205-48214298)
chr3 (325-434)||(51065017-51065126)
chr3 (315-399)||(2858570-2858654)
chr3 (326-434)||(45055321-45055429)
chr3 (318-434)||(52175854-52175969)
chr3 (315-363)||(35458497-35458545)
chr3 (383-434)||(7328589-7328640)
chr3 (315-400)||(20105349-20105426)
chr3 (317-432)||(48152121-48152236)
chr3 (325-434)||(11473536-11473645)
chr3 (318-363)||(28226621-28226666)
chr3 (318-434)||(42515170-42515284)
chr3 (374-434)||(44544079-44544139)
chr3 (315-434)||(50092079-50092198)
chr3 (356-434)||(36370862-36370940)
chr3 (318-372)||(44543727-44543781)
chr3 (341-434)||(32853967-32854060)
[»] scaffold0280 (1 HSPs)
scaffold0280 (315-434)||(8288-8407)
[»] chr7 (59 HSPs)
chr7 (315-434)||(8381960-8382079)
chr7 (315-434)||(33099825-33099944)
chr7 (317-434)||(29497526-29497643)
chr7 (325-434)||(41891404-41891513)
chr7 (315-434)||(7312751-7312870)
chr7 (315-434)||(31430693-31430812)
chr7 (315-434)||(32966039-32966158)
chr7 (315-434)||(29722295-29722413)
chr7 (325-434)||(18470441-18470550)
chr7 (310-434)||(12838063-12838187)
chr7 (315-434)||(8265083-8265202)
chr7 (315-434)||(32528318-32528437)
chr7 (326-434)||(36298175-36298283)
chr7 (316-434)||(26724058-26724177)
chr7 (325-434)||(3837996-3838105)
chr7 (315-434)||(36922373-36922493)
chr7 (315-434)||(5732063-5732182)
chr7 (315-434)||(10227390-10227509)
chr7 (315-434)||(22950808-22950927)
chr7 (315-434)||(41675177-41675295)
chr7 (339-434)||(44480156-44480251)
chr7 (318-434)||(7477191-7477307)
chr7 (318-433)||(31398925-31399040)
chr7 (315-434)||(47408247-47408366)
chr7 (310-434)||(33173941-33174065)
chr7 (315-434)||(38168778-38168898)
chr7 (315-434)||(33921764-33921883)
chr7 (315-389)||(17896481-17896555)
chr7 (371-434)||(17896569-17896632)
chr7 (371-434)||(26632226-26632289)
chr7 (315-434)||(33258015-33258134)
chr7 (365-434)||(20035182-20035251)
chr7 (365-434)||(20045593-20045662)
chr7 (325-434)||(28608728-28608837)
chr7 (322-434)||(37353866-37353979)
chr7 (318-434)||(42841859-42841975)
chr7 (330-434)||(36648011-36648114)
chr7 (326-434)||(35112563-35112671)
chr7 (315-397)||(3310377-3310458)
chr7 (325-399)||(19327791-19327865)
chr7 (318-434)||(18194207-18194323)
chr7 (315-434)||(31815059-31815177)
chr7 (315-394)||(44820597-44820676)
chr7 (325-434)||(35746645-35746754)
chr7 (339-434)||(45324158-45324250)
chr7 (315-399)||(6799588-6799672)
chr7 (315-363)||(36406959-36407007)
chr7 (318-363)||(9601886-9601931)
chr7 (318-363)||(9829457-9829502)
chr7 (327-368)||(22786079-22786120)
chr7 (315-434)||(24283714-24283832)
chr7 (317-372)||(41888986-41889041)
chr7 (322-372)||(35683209-35683259)
chr7 (317-363)||(35860170-35860216)
chr7 (325-427)||(43874083-43874185)
chr7 (315-372)||(30866726-30866783)
chr7 (425-457)||(29165521-29165553)
chr7 (425-457)||(33507642-33507674)
chr7 (429-457)||(41298744-41298772)
[»] scaffold0040 (1 HSPs)
scaffold0040 (315-434)||(69234-69352)
[»] scaffold0007 (1 HSPs)
scaffold0007 (315-434)||(77222-77341)
[»] scaffold0172 (1 HSPs)
scaffold0172 (326-434)||(26126-26234)
[»] scaffold0886 (1 HSPs)
scaffold0886 (315-434)||(4649-4767)
[»] scaffold0002 (2 HSPs)
scaffold0002 (315-434)||(148437-148556)
scaffold0002 (318-380)||(138733-138795)
[»] scaffold0014 (2 HSPs)
scaffold0014 (326-434)||(195586-195694)
scaffold0014 (423-457)||(123530-123564)
[»] scaffold0001 (1 HSPs)
scaffold0001 (315-434)||(419480-419599)
[»] scaffold0831 (1 HSPs)
scaffold0831 (316-434)||(2941-3061)
[»] scaffold0009 (1 HSPs)
scaffold0009 (315-434)||(147115-147234)
[»] scaffold1213 (1 HSPs)
scaffold1213 (365-434)||(5-74)
[»] scaffold0343 (1 HSPs)
scaffold0343 (310-435)||(7557-7682)
[»] scaffold0135 (1 HSPs)
scaffold0135 (315-424)||(30680-30789)
[»] scaffold0471 (1 HSPs)
scaffold0471 (326-434)||(1818-1924)
[»] scaffold0274 (1 HSPs)
scaffold0274 (315-427)||(228-339)
[»] scaffold0775 (1 HSPs)
scaffold0775 (423-457)||(1306-1340)
[»] scaffold0019 (1 HSPs)
scaffold0019 (423-457)||(42847-42881)
[»] scaffold0085 (1 HSPs)
scaffold0085 (429-457)||(39414-39442)


Alignment Details
Target: chr6 (Bit Score: 252; Significance: 1e-140; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 6911870 - 6911577
Alignment:
Q  1 ggtcactaagtacatttcttctaggagagagattggttaccaaaactgacttcagtttagttgtttgacagatattatcaattacatactagtaatctgc 100  Q
    |||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6911870 ggtcactaagtacatttcctctaggagaga--ttggttaccaaaactgacttcagtttagttgtttgacagatattatcaattacatactagtaatctgc 6911773  T
Q  101 cagggataatttaaggttttaacatgtattgaaagtgtcctaagttacagtgttttggtgataaggacaagaatccttaggcttcaatgcaattagttac 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  6911772 cagggataatttaaggttttaacatgtattgaaagtgtcctaagttccagtgttttggtgataaagacaagaatccttaggtttcaatgcaattagttac 6911673  T
Q  201 aatttgtagctggttaattttattttttgtaacttttcaaatagtattagtaaggatgcagattttgaccaagtgttgaggtaaaatgtttttaaatcaa 300  Q
    ||||||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6911672 aatttgtagctggttaattttattttttgtaacttttcaaat------agtaaggatgcagattttgaccaagtgttgaggtaaaatgtttttaaatcaa 6911579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 318 - 434
Target Start/End: Complemental strand, 24663629 - 24663513
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataa 417  Q
    |||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24663629 tccgttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatattacttttgatgcaataagctatacttttactataa 24663530  T
Q  418 tgaccttatttatttaa 434  Q
    |||| ||||| ||||||    
T  24663529 tgacattattcatttaa 24663513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 3621843 - 3621724
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||| ||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  3621843 acctctgttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagttatacttttacta 3621744  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||| ||||| ||||||    
T  3621743 taatgacattattcatttaa 3621724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 1751419 - 1751538
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||||||||  ||||||||||||||||||||||||||||| |||| ||| | |||||||||||||||||||||||||||||||||| |||||||||||||    
T  1751419 acctccgttcttttttaattgtcacattttgacattttacacaaatcaagataatcaacaattgatactacttttgatgcaataagttatacttttacta 1751518  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  1751519 taatgaccttattcatttaa 1751538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 3850573 - 3850454
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||| | |||||||| ||||||||    
T  3850573 acctccgttactttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatgccacaagctatatttttacta 3850474  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  3850473 taatgaccttattcatttaa 3850454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 17123973 - 17124092
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||||| || |||||||||||||||||||||||||||||| ||||| || |||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  17123973 acctccattcctttttaattgtcacattttgacattttacacaaactaagacaatcaataattgatactacttttgatgcaataagttatacttttacta 17124072  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  17124073 taatgaccttattcatttaa 17124092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 22050301 - 22050182
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||| ||||| ||||||||||||||||||||| |||||||||| ||    
T  22050301 acctccgttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaataattgttactacttttgatgcaataagttatacttttatta 22050202  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  22050201 taatgaccttattcatttaa 22050182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 315 - 420
Target Start/End: Original strand, 364530 - 364635
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  364530 acctccgtttctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatcttacttttgatgcaataagctatacttttacta 364629  T
Q  415 taatga 420  Q
    ||||||    
T  364630 taatga 364635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 318 - 434
Target Start/End: Complemental strand, 17836143 - 17836027
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataa 417  Q
    |||||| ||||||||||||||||| |||| ||||||| |||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  17836143 tccgttcctttttaattgtcacatattgatattttacacaaaccaagacaatcaacaattgattctacttttaatgcaataagctatacttttactataa 17836044  T
Q  418 tgaccttatttatttaa 434  Q
    |||||||||| ||||||    
T  17836043 tgaccttattcatttaa 17836027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 325 - 427
Target Start/End: Original strand, 23923711 - 23923813
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctt 424  Q
    |||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  23923711 ctttttaattgtcacattttgacattttgcacaaaccaagacaatcaacaattgatactacttttaatgtaataagctatacttttactataatgacctt 23923810  T
Q  425 att 427  Q
    |||    
T  23923811 att 23923813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 318 - 434
Target Start/End: Complemental strand, 12732425 - 12732309
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataa 417  Q
    |||||| |||||||||||||||||||| ||||||||| |||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  12732425 tccgttcctttttaattgtcacattttaacattttacacaaaacaagacaattaacaattgatactacttttgatgcaataagctatacttttactataa 12732326  T
Q  418 tgaccttatttatttaa 434  Q
    |||  ||||| ||||||    
T  12732325 tgatattattcatttaa 12732309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 327 - 434
Target Start/End: Complemental strand, 373964 - 373857
Alignment:
Q  327 ttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgaccttat 426  Q
    ||||||||||||||||||||||||||||  ||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  373964 ttttaattgtcacattttgacattttacataaaccaagacaatcagcaattgatactacttttgatgcaataaactatacttttactataatgatcttat 373865  T
Q  427 ttatttaa 434  Q
    | ||||||    
T  373864 tcatttaa 373857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 17193411 - 17193292
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||||||||||||| |||||||||||||   ||||||| |||||||||||||||| ||||||||||||||||||| |||  ||||||||    
T  17193411 acctccgttcctttttaattgtcacgttttgacattttatataaaccaagacaatcaacaattgatcctacttttgatgcaataagttattattttacta 17193312  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  17193311 taatgaccttattcatttaa 17193292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 325 - 434
Target Start/End: Original strand, 26470721 - 26470830
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctt 424  Q
    ||||||||||||||| ||||||||||||||  ||||||| |||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  26470721 ctttttaattgtcactttttgacattttacataaaccaagacaatcaataattgttactacttttgatgcaataagttatacttttactataatgacctt 26470820  T
Q  425 atttatttaa 434  Q
     || ||||||    
T  26470821 gttcatttaa 26470830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 317 - 434
Target Start/End: Complemental strand, 1252417 - 1252300
Alignment:
Q  317 ctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactata 416  Q
    |||||||  ||||||||| ||||||||||||||||||   |||| || ||||||||||||||||||||||||||||| ||||| ||||| ||||||||||    
T  1252417 ctccgttcatttttaattatcacattttgacattttatataaactaagacaatcaacaattgatactacttttgatgtaataaactatatttttactata 1252318  T
Q  417 atgaccttatttatttaa 434  Q
    ||||||||||| ||||||    
T  1252317 atgaccttattcatttaa 1252300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 326 - 434
Target Start/End: Complemental strand, 8176675 - 8176567
Alignment:
Q  326 tttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctta 425  Q
    |||||||||||||| |||| ||||||||| |||| ||| |||||||| ||||| | ||||||||||||||||||| ||||||||||||||||||||||||    
T  8176675 tttttaattgtcactttttaacattttacacaaatcaagacaatcaataattgtttctacttttgatgcaataagttatacttttactataatgacctta 8176576  T
Q  426 tttatttaa 434  Q
    || ||||||    
T  8176575 ttaatttaa 8176567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 310 - 434
Target Start/End: Original strand, 30416058 - 30416182
Alignment:
Q  310 ctaccacctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttt 409  Q
    |||| ||||||||| |||||||||| ||| || ||||||||||||  ||||||| |||||||| ||||| ||||||||||||| ||||||| ||||||||    
T  30416058 ctactacctccgttcctttttaattatcatatgttgacattttacataaaccaagacaatcaataattgttactacttttgatacaataagttatacttt 30416157  T
Q  410 tactataatgaccttatttatttaa 434  Q
    ||||||||| |||||||| ||||||    
T  30416158 tactataataaccttattcatttaa 30416182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 315 - 427
Target Start/End: Original strand, 32359428 - 32359540
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||| ||||||||| ||||||  |||||||| ||||| || |||||| ||| ||||||||||||||||||||||||||||||    
T  32359428 acctccgttcctttttaattgttacattttgatattttatacaaaccaagacaattaataattgacacttcttttgatgcaataagctatacttttacta 32359527  T
Q  415 taatgaccttatt 427  Q
    |||||| ||||||    
T  32359528 taatgatcttatt 32359540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 325 - 434
Target Start/End: Complemental strand, 8992792 - 8992682
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaatt-gatactacttttgatgcaataagctatacttttactataatgacct 423  Q
    |||||||||||||||||||||| ||||||| |||||||| | |||||  |||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  8992792 ctttttaattgtcacattttgatattttacacaaaccaagataatcagtaatttgttactacttttgatgcaataagttatacttttactataatgacct 8992693  T
Q  424 tatttatttaa 434  Q
    |||| ||||||    
T  8992692 tattcatttaa 8992682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 325 - 434
Target Start/End: Complemental strand, 9017239 - 9017129
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaatt-gatactacttttgatgcaataagctatacttttactataatgacct 423  Q
    |||||||||||||||||||||| ||||||| |||||||| | |||||  |||| | ||||||||||||||||||||| ||||||||||||||||||||||    
T  9017239 ctttttaattgtcacattttgatattttacacaaaccaagataatcagtaatttgttactacttttgatgcaataagttatacttttactataatgacct 9017140  T
Q  424 tatttatttaa 434  Q
    |||| ||||||    
T  9017139 tattcatttaa 9017129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 310 - 402
Target Start/End: Complemental strand, 30389024 - 30388932
Alignment:
Q  310 ctaccacctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagct 402  Q
    |||| ||||||||| |||||||||| ||||||||||||||||||| |||||||| ||||||||||||| |||||| |||||||||||||||||    
T  30389024 ctactacctccgttcctttttaattatcacattttgacattttacacaaaccaagacaatcaacaattaatactatttttgatgcaataagct 30388932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 23777549 - 23777430
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||| |||| ||||||||||||||| |||||||||||||| |||||||| ||| | || || || ||||||||||||| ||||||  |||||||||||||    
T  23777549 accttcgttcctttttaattgtcactttttgacattttacacaaaccaagacattaaataaatgttactacttttgatacaataatatatacttttacta 23777450  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| |||||||| ||||||    
T  23777449 taataaccttattcatttaa 23777430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 26485673 - 26485792
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||| ||| ||||||||||||||| ||||||||||||||  ||||||| ||| |||| || || ||||||||||||| ||||||  |||||||||||||    
T  26485673 acctctgttcctttttaattgtcactttttgacattttacataaaccaagacattcaataaatgttactacttttgatacaataatatatacttttacta 26485772  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| |||||||| ||||||    
T  26485773 taataaccttattcatttaa 26485792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 320 - 434
Target Start/End: Original strand, 7632030 - 7632144
Alignment:
Q  320 cgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatg 419  Q
    |||| |||||||||  |||| |||||||||||||   ||| ||| |||||||| ||||  ||||| ||||||||||||||| ||||||||||||||||||    
T  7632030 cgttcctttttaataatcactttttgacattttatataaatcaagacaatcaataattattactatttttgatgcaataagttatacttttactataatg 7632129  T
Q  420 accttatttatttaa 434  Q
    |||||||||||||||    
T  7632130 accttatttatttaa 7632144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 318 - 434
Target Start/End: Original strand, 24356045 - 24356161
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagct-atacttttactata 416  Q
    |||||||||||||||||||||| |||||| ||||||  ||||||||||||||||| || || ||||||||||||| | ||  ||| ||||||||||||||    
T  24356045 tccgtttctttttaattgtcactttttgatattttatccaaaccaaaacaatcaataaatgttactacttttgataccat-tgctaatacttttactata 24356143  T
Q  417 atgaccttatttatttaa 434  Q
    |||||||| || ||||||    
T  24356144 atgaccttgttgatttaa 24356161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 17251243 - 17251363
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaa-caattgatactacttttgatgcaataagctatacttttact 413  Q
    ||||||||| ||||||||||||||| |||| ||||||||| |||||||| ||||||||  || || ||||||||||||| ||||    | ||||||||||    
T  17251243 acctccgttcctttttaattgtcactttttaacattttacacaaaccaagacaatcaattaagtgttactacttttgatacaattgcttttacttttact 17251342  T
Q  414 ataatgaccttatttatttaa 434  Q
    |||||||||||||| ||||||    
T  17251343 ataatgaccttattaatttaa 17251363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 318 - 434
Target Start/End: Original strand, 22784659 - 22784775
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataa 417  Q
    |||||| ||||||||||||||| |||| |||||||||  ||||||| | | |||| || |||||||||||||||| ||||||  ||||||||||||||||    
T  22784659 tccgttcctttttaattgtcactttttaacattttacataaaccaagatattcaataaatgatactacttttgatacaataatgtatacttttactataa 22784758  T
Q  418 tgaccttatttatttaa 434  Q
    |  ||||||| ||||||    
T  22784759 tagccttattcatttaa 22784775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 318 - 434
Target Start/End: Original strand, 31244740 - 31244856
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataa 417  Q
    |||||| ||||||||||||||||||||||  |||||| |||||||| |||||||| || || || |||||||||| ||||    | ||||||||||||||    
T  31244740 tccgttcctttttaattgtcacattttgattttttacacaaaccaagacaatcaataaatggtagtacttttgatacaattgtttttacttttactataa 31244839  T
Q  418 tgaccttatttatttaa 434  Q
    |||||||||| ||||||    
T  31244840 tgaccttattaatttaa 31244856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 315 - 422
Target Start/End: Complemental strand, 24949360 - 24949253
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||| |  |||||| ||||||| ||||||||||||||||| || || ||||||||||||| |||| |  | |||||||||||    
T  24949360 acctccgttcctttttaattgttattttttgatattttacacaaaccaaaacaatcaataaatgttactacttttgatacaattatttttacttttacta 24949261  T
Q  415 taatgacc 422  Q
    ||||||||    
T  24949260 taatgacc 24949253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 315 - 400
Target Start/End: Complemental strand, 53884 - 53798
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttga-tgcaataag 400  Q
    |||||||||||||||||||||||||||||||| |||||||  | ||||| |||||||| ||||| |||||||||||| |||||||||    
T  53884 acctccgtttctttttaattgtcacattttgatattttacatataccaagacaatcaataattgttactacttttgattgcaataag 53798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 315 - 424
Target Start/End: Original strand, 7056128 - 7056237
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||  ||||||||||||||| |||||||||||||| |||| ||| | |||||| ||||  |  |||||||||||||||||| ||| |||||||||    
T  7056128 acctccgtacctttttaattgtcactttttgacattttacacaaatcaagataatcaataattatttttacttttgatgcaataagttattcttttacta 7056227  T
Q  415 taatgacctt 424  Q
    |||| |||||    
T  7056228 taataacctt 7056237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 9838110 - 9838229
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||| ||| ||||||||||||||  || ||| ||||||| |||| |||||||||||| || || ||||||||||||| ||||||   ||||||||||||    
T  9838110 acctctgttcctttttaattgtcattttgtgatattttacacaaatcaaaacaatcaataaatgttactacttttgatacaataattgatacttttacta 9838209  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||  ||||||| ||||||    
T  9838210 taatagccttattcatttaa 9838229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 11129084 - 11128965
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||| ||| ||||||||||||||| |||||||||||||| |||| ||| ||||| || || || ||||||||||||| ||||    | || ||||||||    
T  11129084 acctctgttcctttttaattgtcactttttgacattttacacaaatcaagacaattaataaatgttactacttttgatacaattgtttttatttttacta 11128985  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  11128984 taatgaccttattaatttaa 11128965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 326 - 434
Target Start/End: Original strand, 11676614 - 11676722
Alignment:
Q  326 tttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctta 425  Q
    ||||||||||| || |||||| ||||||| |||||||| |||||||| || |  ||||||||||||| ||||    | ||||||||||||||||||||||    
T  11676614 tttttaattgttactttttgatattttacacaaaccaagacaatcaataaatattactacttttgatacaattgtttttacttttactataatgacctta 11676713  T
Q  426 tttatttaa 434  Q
    || ||||||    
T  11676714 ttaatttaa 11676722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 315 - 399
Target Start/End: Original strand, 17601121 - 17601205
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataa 399  Q
    ||||| ||||||||||||||||||||||||||| |||||| ||||| || |||||||| || || | ||||||||||| ||||||    
T  17601121 acctctgtttctttttaattgtcacattttgacgttttacacaaactaagacaatcaataaatgttgctacttttgatacaataa 17601205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 315 - 427
Target Start/End: Complemental strand, 34607351 - 34607239
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||| |  |||||||||||||  |||||||| ||| ||||  | || ||||||||||||| ||| ||  |||||||||||||    
T  34607351 acctccgttcctttttaattgttaatttttgacattttatacaaaccaagacattcaatgaatgttactacttttgatacaacaatgtatacttttacta 34607252  T
Q  415 taatgaccttatt 427  Q
    |||| | ||||||    
T  34607251 taataatcttatt 34607239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 434
Target Start/End: Complemental strand, 30388901 - 30388855
Alignment:
Q  388 ttgatgcaataagctatacttttactataatgaccttatttatttaa 434  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||    
T  30388901 ttgatgcaataagctatacttttactataatgatcttattcatttaa 30388855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 315 - 418
Target Start/End: Original strand, 11431145 - 11431248
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||| ||||| |||||||||||||||||| |||| |||| |||| ||| |||||||| |  |  | ||||||||||| ||||||  ||||||||||| |    
T  11431145 acctctgtttcgttttaattgtcacatttttacatgttacacaaatcaagacaatcaatagctattcctacttttgatacaataacttatacttttacga 11431244  T
Q  415 taat 418  Q
    ||||    
T  11431245 taat 11431248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 326 - 418
Target Start/End: Original strand, 19645721 - 19645815
Alignment:
Q  326 tttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatg--caataagctatacttttactataat 418  Q
    |||||||||||||| |||||||||||||| ||||| || |||||||| |  || |||||||||||||   |||||   |||||||||||||||||    
T  19645721 tttttaattgtcactttttgacattttacacaaactaagacaatcaatagatgttactacttttgatatacaatactttatacttttactataat 19645815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 418
Target Start/End: Complemental strand, 24635965 - 24635858
Alignment:
Q  311 taccacctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatactttt 410  Q
    |||||||||||||||| ||||| |||||| |||| ||||||||| |||||||| | |||||| || || ||||  || | || ||||||  ||||| |||    
T  24635965 taccacctccgtttctctttaaatgtcactttttaacattttacacaaaccaagataatcaataaatgttactttttcttatacaataatttatacattt 24635866  T
Q  411 actataat 418  Q
    ||||||||    
T  24635865 actataat 24635858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 321 - 434
Target Start/End: Original strand, 32250946 - 32251058
Alignment:
Q  321 gtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatga 420  Q
    |||||||||||||| |||||||||||| |||||| |||||||| |||| |||  | |  ||||||||||||||||| ||  |||  |||| ||||||| |    
T  32250946 gtttctttttaattatcacattttgactttttacacaaaccaagacaa-caaatacttttactacttttgatgcaagaatttatctttttcctataataa 32251044  T
Q  421 ccttatttatttaa 434  Q
    ||||| | ||||||    
T  32251045 ccttaatcatttaa 32251058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 33260958 - 33260834
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaaca-----attgatactacttttgatgcaataagctatacttt 409  Q
    ||||||||| |||| ||| |||||| |||||||||||||| |||||||| | |||||| |     | || ||||||||||||| ||||    | ||||||    
T  33260958 acctccgttcctttataactgtcactttttgacattttacacaaaccaagataatcaataaatataatgttactacttttgatacaattgtttttacttt 33260859  T
Q  410 tactataatgaccttatttatttaa 434  Q
     ||||||||||||||||| ||||||    
T  33260858 cactataatgaccttattaatttaa 33260834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 315 - 427
Target Start/End: Complemental strand, 34730812 - 34730701
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||| |||  |||||| ||||||  |||||||| ||| ||||  | || ||||||||||||| ||| ||  |||| ||||||||    
T  34730812 acctccgttcctttttaattatcat-ttttgatattttatacaaaccaagacattcaatgaatgttactacttttgatacaacaatgtatatttttacta 34730714  T
Q  415 taatgaccttatt 427  Q
    |||| ||||||||    
T  34730713 taataaccttatt 34730701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 22400552 - 22400671
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||||||||  | ||||| |||||| ||  |||||||||| |||||||| ||| |||| || || |||||||||||||  || ||   ||||||||||||    
T  22400552 acctccgttcttgtttaagtgtcactttaagacattttacacaaaccaatacattcaataaatgttactacttttgatagaacaatgcatacttttacta 22400651  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| || ||||| ||||||    
T  22400652 taataacattattcatttaa 22400671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 434
Target Start/End: Complemental strand, 7235628 - 7235574
Alignment:
Q  380 tactacttttgatgcaataagctatacttttactataatgaccttatttatttaa 434  Q
    ||||||||||||| |||||   ||||||||||||||||| |||||||| ||||||    
T  7235628 tactacttttgatacaatacaatatacttttactataataaccttattcatttaa 7235574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 423 - 457
Target Start/End: Complemental strand, 21215826 - 21215792
Alignment:
Q  423 ttatttatttaagggttaaatatgtttttggtccc 457  Q
    |||||||||||||| ||||||||||||||||||||    
T  21215826 ttatttatttaaggcttaaatatgtttttggtccc 21215792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 417
Target Start/End: Complemental strand, 1924092 - 1924003
Alignment:
Q  328 tttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataa 417  Q
    |||||||||||| |||| ||||||||   ||||||| | |||||| || || || || |||||||| |||||  ||||||||||||||||    
T  1924092 tttaattgtcactttttcacattttatataaaccaagataatcaataaatgttattaattttgatgaaataatttatacttttactataa 1924003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 424 - 456
Target Start/End: Complemental strand, 352975 - 352943
Alignment:
Q  424 tatttatttaagggttaaatatgtttttggtcc 456  Q
    ||||||||| |||||||||||||||||||||||    
T  352975 tatttattttagggttaaatatgtttttggtcc 352943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 140; Significance: 4e-73; HSPs: 2)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 15451 - 15206
Alignment:
Q  1 ggtcactaagtacatttcttctaggagagagattggttaccaaaactgacttcagtttagttgtttgacagatattatcaattacatactagtaatctgc 100  Q
    ||||| |||||||| ||| |||||||||||  |||||||||||| || ||||  |||||||||||||| |||||||| |||||||||||||||||||||     
T  15451 ggtcaataagtacaattcctctaggagaga--ttggttaccaaagctaacttttgtttagttgtttgagagatattaccaattacatactagtaatctga 15354  T
Q  101 cagggataatttaaggttttaacatgtattgaaagtgtcctaagttacagtgttttggtgataaggacaagaatccttagg-------cttcaatgcaat 193  Q
     ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||        |||||||||||    
T  15353 -agggataatttaaggttttaacatgtattaaaagtgtcctaagttccagtgttttggtgataaagacaagaatccttaggtttcaaatttcaatgcaat 15255  T
Q  194 tagttacaatttgtagctggttaattttattttttgtaacttttcaaat 242  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  15254 tagttacaatttgtagctggttaattttaattttcgtaacttttcaaat 15206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242; HSP #2
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 24286 - 24041
Alignment:
Q  1 ggtcactaagtacatttcttctaggagagagattggttaccaaaactgacttcagtttagttgtttgacagatattatcaattacatactagtaatctgc 100  Q
    ||||| |||||||| ||| |||||||||||  |||||||||||| || ||||  |||||||||||||| |||||||| |||||||||||||||||||||     
T  24286 ggtcaataagtacaattcctctaggagaga--ttggttaccaaagctaacttttgtttagttgtttgagagatattaccaattacatactagtaatctga 24189  T
Q  101 cagggataatttaaggttttaacatgtattgaaagtgtcctaagttacagtgttttggtgataaggacaagaatccttagg-------cttcaatgcaat 193  Q
     ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||        |||||||||||    
T  24188 -agggataatttaaggttttaacatgtattaaaagtgtcctaagttccagtgttttggtgataaagacaagaatccttaggtttcaaatttcaatgcaat 24090  T
Q  194 tagttacaatttgtagctggttaattttattttttgtaacttttcaaat 242  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  24089 tagttacaatttgtagctggttaattttaattttcgtaacttttcaaat 24041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 109; Significance: 1e-54; HSPs: 105)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 310 - 434
Target Start/End: Complemental strand, 44069292 - 44069168
Alignment:
Q  310 ctaccacctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttt 409  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  44069292 ctactacctccgtttctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttt 44069193  T
Q  410 tactataatgaccttatttatttaa 434  Q
    |||||||||||||||||| ||||||    
T  44069192 tactataatgaccttattcatttaa 44069168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 44013901 - 44014020
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  44013901 acctccgttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgaaactatttttgatgcaataagctatacttttacta 44014000  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||||||||||    
T  44014001 taatgaccttatttatttaa 44014020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 8735645 - 8735526
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8735645 acctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttttacta 8735546  T
Q  415 taatgaccttatttatttaa 434  Q
    |||||| |||||| ||||||    
T  8735545 taatgatcttattcatttaa 8735526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 44217962 - 44217843
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  44217962 acctccgttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagatatacttttacta 44217863  T
Q  415 taatgaccttatttatttaa 434  Q
    |||||||||| || ||||||    
T  44217862 taatgaccttcttcatttaa 44217843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 317 - 434
Target Start/End: Original strand, 26620341 - 26620458
Alignment:
Q  317 ctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactata 416  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  26620341 ctccgttcctttttaattgtcacattttgacattttgcacaaaccaaaacaaacaacaattgatactacttttgatgcaataagctatacttttattata 26620440  T
Q  417 atgaccttatttatttaa 434  Q
    ||||||||||| ||||||    
T  26620441 atgaccttattaatttaa 26620458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 16464770 - 16464889
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||||| |||||||||||||||||||||| |||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  16464770 acctccgttcctttttagttgtcacattttgacattttacacaaacctagacaatcaacaattgatactatttttgatgcaataagctatacttttacta 16464869  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  16464870 taatgaccttattcatttaa 16464889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 21044736 - 21044854
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||||| || ||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  21044736 acctccgttccttttta-ttatcacattttgacattttacacaaaccaagacaatcaacaattgatactatttttgatgcaataagctatacttttacta 21044834  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||||||||||    
T  21044835 taatgaccttatttatttaa 21044854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 39671581 - 39671462
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| || ||||||||||||||| ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  39671581 acctccgttcctatttaattgtcacattatgacattttacacaaaccaagacaatcaacaattgatattacttttgatgcaataagctatacttttacta 39671482  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  39671481 taatgaccttattcatttaa 39671462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 53599774 - 53599893
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  53599774 acctccgttcctttttaattgtcacattttaacattttacacaaaccaagacaatcaacaattgatattacttttgatgcaataagttatacttttacta 53599873  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  53599874 taatgaccttattcatttaa 53599893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 56576092 - 56576211
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||||||||||||||||||||| |||||| |||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  56576092 acctccgttcctttttaattgtcacattttgacgttttacacaaaccaagataatcaacaattgatactacctttgatgcaataagctatacttttacta 56576191  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  56576192 taatgaccttattcatttaa 56576211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 326 - 434
Target Start/End: Original strand, 35232297 - 35232405
Alignment:
Q  326 tttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctta 425  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  35232297 tttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactgcttttgatgcaataagatatacttttactataatgacctta 35232396  T
Q  426 tttatttaa 434  Q
    || ||||||    
T  35232397 ttcatttaa 35232405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 38617297 - 38617414
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||||||||||| ||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  38617297 acctccgttcctttttaattgtcacattttgatattttacacaaaccaa--caatcaacaattgatactacttttgatgcaataagctatatttttacta 38617394  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  38617395 taatgaccttattcatttaa 38617414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 326 - 434
Target Start/End: Complemental strand, 48782444 - 48782336
Alignment:
Q  326 tttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctta 425  Q
    ||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  48782444 tttttaattgtcacattttgacattttacacaaaccaagataatcaacaattgatactacttttgatgcaataagcaatacttttactataatgacctta 48782345  T
Q  426 tttatttaa 434  Q
    || ||||||    
T  48782344 ttcatttaa 48782336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 5374338 - 5374457
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||||||||||||||||||||||| ||||||||||||||  |||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  5374338 acctccgtttctttttaattgtcatattttgacattttatacaaatcaagacaatcaacaattgatactacttttgatgcaataagctatatttttacta 5374437  T
Q  415 taatgaccttatttatttaa 434  Q
    |||||| |||||| ||||||    
T  5374438 taatgatcttattcatttaa 5374457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 13629181 - 13629300
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||| ||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  13629181 acctctgttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactatttttcatgcaataagctatacttttacta 13629280  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| |||||||| ||||||    
T  13629281 taataaccttattcatttaa 13629300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 331 - 434
Target Start/End: Complemental strand, 16664481 - 16664378
Alignment:
Q  331 aattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgaccttatttat 430  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  16664481 aattgtcacattttgacattttacacaaatcaagacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgaccttattcat 16664382  T
Q  431 ttaa 434  Q
    ||||    
T  16664381 ttaa 16664378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 22828389 - 22828508
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||| |||| ||| ||||| ||||||||||||||||||||| |||||||||||||    
T  22828389 acctccgttcctttttaattgtcacattttgacattttacacaaaccaagacaaccaataattgctactacttttgatgcaataagttatacttttacta 22828488  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  22828489 taatgaccttattcatttaa 22828508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 35231946 - 35231827
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||  || ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  35231946 acctccgttcctttttaattgtcacattttgacattttacacaaattaagacaatcaacaattgatactacttttgatgcaataaactatacttttacta 35231847  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||| ||||| ||||||    
T  35231846 taatgactttattcatttaa 35231827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 325 - 427
Target Start/End: Complemental strand, 36408969 - 36408867
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctt 424  Q
    |||||||||||||||||||||||||||||| |||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  36408969 ctttttaattgtcacattttgacattttacacaaaccaagacaataaacatttgatactacttttgatgcaataagctatacttttactataatgacctt 36408870  T
Q  425 att 427  Q
    |||    
T  36408869 att 36408867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 325 - 427
Target Start/End: Complemental strand, 36423135 - 36423033
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctt 424  Q
    |||||||||||||||||||||||||||||| |||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  36423135 ctttttaattgtcacattttgacattttacacaaaccaagacaataaacatttgatactacttttgatgcaataagctatacttttactataatgacctt 36423036  T
Q  425 att 427  Q
    |||    
T  36423035 att 36423033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 320 - 434
Target Start/End: Complemental strand, 46872172 - 46872058
Alignment:
Q  320 cgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatg 419  Q
    |||| ||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  46872172 cgttccttttaaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagttattcttttactataatg 46872073  T
Q  420 accttatttatttaa 434  Q
    |||||||| ||||||    
T  46872072 accttattcatttaa 46872058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 318 - 434
Target Start/End: Complemental strand, 23237883 - 23237767
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataa 417  Q
    |||||| |||||||||||| ||||||| ||||||||| ||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  23237883 tccgttcctttttaattgttacattttaacattttacacaaactagaacaatcaacaattgatactacttttgatgcgataagctatacttttactataa 23237784  T
Q  418 tgaccttatttatttaa 434  Q
    |||||||||| ||||||    
T  23237783 tgaccttattcatttaa 23237767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 22678297 - 22678416
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||||||||  ||||||||||||||||||||||||||||   ||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||    
T  22678297 acctccgttcatttttaattgtcacattttgacattttatataaaccaagataatcaacaattgatactactattgatgcaataagctatacttttacta 22678396  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  22678397 taatgaccttattcatttaa 22678416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 33755019 - 33755138
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||||||||| |||||||||  |||| || ||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  33755019 acctccgttcctttttaattgtcacattttaacattttacataaactaagacaatcaacaattgatactccttttaatgcaataagctatacttttacta 33755118  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  33755119 taatgaccttattcatttaa 33755138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 326 - 433
Target Start/End: Complemental strand, 50623658 - 50623551
Alignment:
Q  326 tttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctta 425  Q
    ||||||||||||||||||| ||||||||| |||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  50623658 tttttaattgtcacattttaacattttacacaaaccaagacaatcaaaaattgatactacttttgatacaataagctatacttttactataatgacctta 50623559  T
Q  426 tttattta 433  Q
    || |||||    
T  50623558 ttcattta 50623551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 326 - 434
Target Start/End: Original strand, 3436066 - 3436174
Alignment:
Q  326 tttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctta 425  Q
    ||||||||| ||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||    
T  3436066 tttttaattatcacattttgacattttacacaaaccaagacaatcaacaattaatactacttttgatgcaataaactatacttttactataataacctta 3436165  T
Q  426 tttatttaa 434  Q
    || ||||||    
T  3436166 ttaatttaa 3436174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 316 - 432
Target Start/End: Original strand, 19527209 - 19527325
Alignment:
Q  316 cctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactat 415  Q
    ||||| || ||||||||||||||||||||||| |||||| |||||||| | |||||||||||||||||||||||||| |||||||||||| |||||||||    
T  19527209 cctcctttcctttttaattgtcacattttgacgttttacacaaaccaagataatcaacaattgatactacttttgatacaataagctataattttactat 19527308  T
Q  416 aatgaccttatttattt 432  Q
    |||||||||||| ||||    
T  19527309 aatgaccttattcattt 19527325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 322 - 434
Target Start/End: Original strand, 31984147 - 31984259
Alignment:
Q  322 tttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgac 421  Q
    |||||||||||||||||| |||||||||||||| |||||||| |||||||| ||||| ||||||||||||||||||||| |||||||||||| |||||||    
T  31984147 tttctttttaattgtcactttttgacattttacacaaaccaacacaatcaataattgttactacttttgatgcaataagttatacttttactgtaatgac 31984246  T
Q  422 cttatttatttaa 434  Q
    |||||| ||||||    
T  31984247 cttattcatttaa 31984259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 310 - 434
Target Start/End: Original strand, 39683697 - 39683821
Alignment:
Q  310 ctaccacctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttt 409  Q
    |||| ||||||||| |||||||||| ||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  39683697 ctactacctccgttcctttttaattatcacattttcacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatatttt 39683796  T
Q  410 tactataatgaccttatttatttaa 434  Q
    || ||||| || |||||| ||||||    
T  39683797 tagtataacgatcttattcatttaa 39683821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 54231795 - 54231676
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||||||||||||  |||||||||||||| |||| ||| |||||||| ||||| ||||||||||||||||||||| |||||||||||||    
T  54231795 acctccgttcctttttaattgtcattttttgacattttacacaaatcaagacaatcaataattgttactacttttgatgcaataagttatacttttacta 54231696  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  54231695 taatgaccttattcatttaa 54231676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 310 - 434
Target Start/End: Complemental strand, 42099969 - 42099845
Alignment:
Q  310 ctaccacctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttt 409  Q
    |||| |||| ||||| |||||||||||||||||||||||||  || |||||||| |||||||| ||||| ||||||||||||||||||||| ||||||||    
T  42099969 ctactaccttcgtttttttttaattgtcacattttgacattaaacacaaaccaagacaatcaataattgttactacttttgatgcaataagttatacttt 42099870  T
Q  410 tactataatgaccttatttatttaa 434  Q
    |||| ||||||||||||| ||||||    
T  42099869 tactgtaatgaccttattcatttaa 42099845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 42513013 - 42513133
Alignment:
Q  315 acctccgtttctttttaattgtcacatttt-gacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttact 413  Q
    |||||||||  ||||||||||||||||||| || ||||||| |||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  42513013 acctccgttcatttttaattgtcacatttttgaaattttacacaaatcaagacaatcaacaattaatactacttttgatgcaataagctatacttttact 42513112  T
Q  414 ataatgaccttatttatttaa 434  Q
    || ||||||||||| ||||||    
T  42513113 atcatgaccttattcatttaa 42513133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 12252348 - 12252229
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||| ||||| |||||||||||||||  ||| ||| ||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  12252348 acctccgttcctttttaactgtcatattttgacattttacataaatcaagacaatcaacaattgataatacttttgatgcaataagttatacttttacta 12252249  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||| ||||| ||||||    
T  12252248 taatgactttattcatttaa 12252229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 19093141 - 19093260
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||||||||||||||||||||||||||||  ||||||| | | |||| ||||| ||||||||||||||||||||| | |||||||||||    
T  19093141 acctccgttcctttttaattgtcacattttgacattttacataaaccaagatagtcaataattgttactacttttgatgcaataagttgtacttttacta 19093240  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  19093241 taatgaccttattcatttaa 19093260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 52061814 - 52061695
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||| ||||||||||||||| |||| ||| ||||||||  |||| ||||||||||||||||||||| |||||||||||||    
T  52061814 acctccgttcctttttaattgtcatattttgacattttacacaaatcaagacaatcaatcattgttactacttttgatgcaataagttatacttttacta 52061715  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||| ||||| ||||||    
T  52061714 taatgactttattcatttaa 52061695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 321 - 434
Target Start/End: Complemental strand, 29295604 - 29295491
Alignment:
Q  321 gtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatga 420  Q
    |||| ||||||||| ||||||||||| ||||||| |||||||| |||||||| ||||||||||||||| ||||||||||| |||||||||| ||||||||    
T  29295604 gtttttttttaattatcacattttgatattttacacaaaccaagacaatcaataattgatactactttcgatgcaataagttatacttttaatataatga 29295505  T
Q  421 ccttatttatttaa 434  Q
    ||||||| ||||||    
T  29295504 ccttattcatttaa 29295491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 317 - 434
Target Start/End: Complemental strand, 34464531 - 34464414
Alignment:
Q  317 ctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactata 416  Q
    ||||||| |||||||||||| ||||||||| ||||||  ||||  ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||    
T  34464531 ctccgttcctttttaattgttacattttgatattttatacaaattaaaacaatcaataattgatattacttttgatgcaataagctatacttttaatata 34464432  T
Q  417 atgaccttatttatttaa 434  Q
    ||||||||||| ||||||    
T  34464431 atgaccttattcatttaa 34464414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 310 - 434
Target Start/End: Complemental strand, 6195285 - 6195161
Alignment:
Q  310 ctaccacctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttt 409  Q
    |||| ||||| ||| ||||||||||||||| |||||||||||| | |||||||| |||||| | ||||| ||||||||||||||||||||| ||||||||    
T  6195285 ctactacctctgttcctttttaattgtcactttttgacatttttcacaaaccaagacaatccataattgctactacttttgatgcaataagttatacttt 6195186  T
Q  410 tactataatgaccttatttatttaa 434  Q
    |||||| |||||||| |||||||||    
T  6195185 tactatgatgaccttgtttatttaa 6195161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 326 - 434
Target Start/End: Original strand, 26906388 - 26906496
Alignment:
Q  326 tttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctta 425  Q
    ||||||||||||| ||||||| ||||||| ||||| |||||||||||||||||||| ||||||| |||||||||| |||||||||||| |||||||||||    
T  26906388 tttttaattgtcatattttgatattttacacaaactaaaacaatcaacaattgatattactttttatgcaataagttatacttttactttaatgacctta 26906487  T
Q  426 tttatttaa 434  Q
    || ||||||    
T  26906488 ttaatttaa 26906496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 47251669 - 47251550
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||||||||||||||||||||||||  ||||||||  ||||||||| ||||||  |||| ||||||||||||||||||||| | |||||||| ||    
T  47251669 acctccgtttctttttaattgtcacattttatcattttacataaaccaaaataatcaatgattgttactacttttgatgcaataagttgtacttttatta 47251570  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  47251569 taatgaccttattcatttaa 47251550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 318 - 434
Target Start/End: Complemental strand, 33084726 - 33084615
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataa 417  Q
    |||||| ||||||||||||||| ||||||||||||||  ||||     ||||||| ||||| ||||||||||||||||||||| ||||||||||||||||    
T  33084726 tccgttcctttttaattgtcactttttgacattttacagaaac-----caatcaataattgttactacttttgatgcaataagttatacttttactataa 33084632  T
Q  418 tgaccttatttatttaa 434  Q
    |||||||||||||||||    
T  33084631 tgaccttatttatttaa 33084615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 354222 - 354103
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||||||||||||||||||||||||||||  ||||||| | | ||||  |||| ||||| ||||||||||||||| | |||||||||||    
T  354222 acctccgttcctttttaattgtcacattttgacattttacataaaccaagatagtcaatgattgttactatttttgatgcaataagttgtacttttacta 354123  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  354122 taatgaccttattcatttaa 354103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 329 - 434
Target Start/End: Original strand, 53125240 - 53125345
Alignment:
Q  329 ttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgaccttattt 428  Q
    |||||||||| ||||||||||||||| |||||||| | |||||| ||||| ||||| |||| |||||||||| ||||||||||||||||||||||||||     
T  53125240 ttaattgtcatattttgacattttacacaaaccaagataatcaataattgttactattttttatgcaataagttatacttttactataatgaccttattc 53125339  T
Q  429 atttaa 434  Q
    ||||||    
T  53125340 atttaa 53125345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 328 - 428
Target Start/End: Original strand, 47884988 - 47885088
Alignment:
Q  328 tttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgaccttatt 427  Q
    ||||||||||||||||||||||||||| | ||||||||||||||| ||||  || |||||||||||||||||| |  |||||||||||||||||||||||    
T  47884988 tttaattgtcacattttgacattttacacgaaccaaaacaatcaataattattattacttttgatgcaataagtttgacttttactataatgaccttatt 47885087  T
Q  428 t 428  Q
    |    
T  47885088 t 47885088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 317 - 433
Target Start/End: Complemental strand, 55703174 - 55703058
Alignment:
Q  317 ctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactata 416  Q
    ||||||| |||||||||||||| |||||||||||||||  | ||||| |||||||| ||||| || |||||||||||||||||| |||| ||||||||||    
T  55703174 ctccgttcctttttaattgtcatattttgacattttacatataccaagacaatcaataattgttattacttttgatgcaataagttatatttttactata 55703075  T
Q  417 atgaccttatttattta 433  Q
    | ||||||||| |||||    
T  55703074 acgaccttattcattta 55703058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 310 - 388
Target Start/End: Complemental strand, 9834541 - 9834463
Alignment:
Q  310 ctaccacctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttt 388  Q
    |||| ||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  9834541 ctactacctccgttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttt 9834463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 325 - 434
Target Start/End: Original strand, 38542274 - 38542383
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctt 424  Q
    ||||||||||||||  ||||||||||||||  ||||||| ||||| || ||||| ||||||||||||||||||||| || |||||||||||||||| |||    
T  38542274 ctttttaattgtcattttttgacattttacataaaccaagacaattaataattgttactacttttgatgcaataagttagacttttactataatgaactt 38542373  T
Q  425 atttatttaa 434  Q
    ||| ||||||    
T  38542374 attcatttaa 38542383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 323 - 434
Target Start/End: Original strand, 8741615 - 8741731
Alignment:
Q  323 ttctttttaattgtcacattttgacattttacg-----caaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataa 417  Q
    ||||||||||||| |||||||||||||||||       |||||||  ||||| ||||||||||| ||||||||||||||||||||||||||||| |||||    
T  8741615 ttctttttaattgacacattttgacattttattttatacaaaccattacaattaacaattgatattacttttgatgcaataagctatacttttattataa 8741714  T
Q  418 tgaccttatttatttaa 434  Q
    |||||||||| ||||||    
T  8741715 tgaccttattcatttaa 8741731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 317 - 434
Target Start/End: Original strand, 31861976 - 31862093
Alignment:
Q  317 ctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactata 416  Q
    ||||||| |||||||||||| |  |||||| ||||||| ||||| || | |||||| ||||| ||||||||||||||||| ||  |||||||||||||||    
T  31861976 ctccgttcctttttaattgttattttttgaaattttacacaaactaagataatcaataattgttactacttttgatgcaaaaaattatacttttactata 31862075  T
Q  417 atgaccttatttatttaa 434  Q
    ||||||||||| ||||||    
T  31862076 atgaccttattcatttaa 31862093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 55147048 - 55147168
Alignment:
Q  315 acctccgtttctttttaattgtcacattttg-acattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttact 413  Q
    |||||||||  |||||||||||||  ||||  |||||||||  ||||||| ||||| || ||||| || |||||||||||||||||||||||||||||||    
T  55147048 acctccgttcttttttaattgtcattttttttacattttacataaaccaagacaattaataattgttattacttttgatgcaataagctatacttttact 55147147  T
Q  414 ataatgaccttatttatttaa 434  Q
     ||||||||||||| ||||||    
T  55147148 gtaatgaccttattcatttaa 55147168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 327 - 434
Target Start/End: Complemental strand, 37502266 - 37502159
Alignment:
Q  327 ttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgaccttat 426  Q
    |||| |||||||| |||||||||||||  |||||||| |||||||| || || ||||||||||||| ||||||  ||||||||||||||||| |||||||    
T  37502266 ttttgattgtcactttttgacattttatacaaaccaagacaatcaataaatgttactacttttgatacaataatttatacttttactataataaccttat 37502167  T
Q  427 ttatttaa 434  Q
    | ||||||    
T  37502166 tcatttaa 37502159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 324 - 434
Target Start/End: Complemental strand, 42645508 - 42645398
Alignment:
Q  324 tctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacct 423  Q
    ||||||||||| |||||||||||||||||||  | || || | |||||| ||||| || |||||||||||||||||| ||||||||||| ||||||| ||    
T  42645508 tctttttaattatcacattttgacattttacatatactaagataatcaataattgttattacttttgatgcaataagttatacttttaccataatgatct 42645409  T
Q  424 tatttatttaa 434  Q
    |||| ||||||    
T  42645408 tattcatttaa 42645398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 315 - 389
Target Start/End: Original strand, 52677154 - 52677228
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactactttt 389  Q
    |||||| || |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||    
T  52677154 acctccattcctttttaattgtcacattttgacattttacacaaaccaaaacaatcaataattgatgctactttt 52677228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 322 - 434
Target Start/End: Original strand, 18135045 - 18135158
Alignment:
Q  322 tttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatacta-cttttgatgcaataagctatacttttactataatga 420  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||| || |  |||||  ||||||| ||||||  | || |||||||||||| |    
T  18135045 tttctttttaattgtcatattttgacattttacacaaaccaaaacaatcaataaatattactattttttgatacaataatttttatttttactataataa 18135144  T
Q  421 ccttatttatttaa 434  Q
    ||||||||||||||    
T  18135145 ccttatttatttaa 18135158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 322 - 434
Target Start/End: Original strand, 49122255 - 49122368
Alignment:
Q  322 tttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatacta-cttttgatgcaataagctatacttttactataatga 420  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||| || |  |||||  ||||||| ||||||  | || |||||||||||| |    
T  49122255 tttctttttaattgtcatattttgacattttacacaaaccaaaacaatcaataaatattactattttttgatacaataatttttatttttactataataa 49122354  T
Q  421 ccttatttatttaa 434  Q
    ||||||||||||||    
T  49122355 ccttatttatttaa 49122368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 44176577 - 44176696
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||||||||||||||||||| |||| |||||||||  ||||||||||| | || || |  ||||||||||||| ||||||  |||||||||| ||    
T  44176577 acctccgtttctttttaattgtcactttttaacattttacataaaccaaaacatttaataaatattactacttttgatacaataatatatacttttatta 44176676  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| || ||||| ||||||    
T  44176677 taataactttattcatttaa 44176696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 23719772 - 23719891
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||| |  ||||||||||||||  |||| || ||| |||| || |  ||||||||||||| ||||||  |||||||||||||    
T  23719772 acctccgttcctttttaattgttattttttgacattttacataaactaagacattcaataaatattactacttttgatacaataatatatacttttacta 23719871  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| |||||||| ||||||    
T  23719872 taataaccttattcatttaa 23719891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 315 - 430
Target Start/End: Original strand, 36659415 - 36659530
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||| ||||||||||  |||||||||||||| |||| ||| |||||||| ||||| |  || |||| |||||||||| ||| |||||||||    
T  36659415 acctccgttccttcttaattgtcattttttgacattttacacaaatcaagacaatcaataattgtttttatttttaatgcaataagttatgcttttacta 36659514  T
Q  415 taatgaccttatttat 430  Q
    ||||||| || |||||    
T  36659515 taatgacattgtttat 36659530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 380 - 434
Target Start/End: Original strand, 23621905 - 23621959
Alignment:
Q  380 tactacttttgatgcaataagctatacttttactataatgaccttatttatttaa 434  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  23621905 tactacttttgatgcaataaactatacttttactataatgaccttattcatttaa 23621959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 365 - 415
Target Start/End: Complemental strand, 32239602 - 32239552
Alignment:
Q  365 acaatcaacaattgatactacttttgatgcaataagctatacttttactat 415  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  32239602 acaattaacaattgatactacttttgatgcaataagctatacttttactat 32239552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 315 - 397
Target Start/End: Complemental strand, 33809343 - 33809261
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaat 397  Q
    ||||| ||| ||||||||||||||| |||| ||||||||| |||| |||||||||||| || || ||||||||||||||||||    
T  33809343 acctctgttcctttttaattgtcactttttaacattttacacaaatcaaaacaatcaataaatgttactacttttgatgcaat 33809261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 434
Target Start/End: Complemental strand, 47094017 - 47093949
Alignment:
Q  366 caatcaacaattgatactacttttgatgcaataagctatacttttactataatgaccttatttatttaa 434  Q
    ||||||| ||||| | ||||||||||||||||||| ||||||||||||||||||| |||||| ||||||    
T  47094017 caatcaataattgtttctacttttgatgcaataagttatacttttactataatgatcttattaatttaa 47093949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 434
Target Start/End: Original strand, 47596604 - 47596720
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataa 417  Q
    |||||| ||||||||||||||  |||||||||||||| |||||||| | | |||| || || ||||||||||||| ||||||  ||| ||||| | ||||    
T  47596604 tccgttcctttttaattgtcattttttgacattttacacaaaccaataaagtcaataaatgttactacttttgatacaataaattatccttttccaataa 47596703  T
Q  418 tgaccttatttatttaa 434  Q
    | |||||||| ||||||    
T  47596704 taaccttattcatttaa 47596720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 30939411 - 30939292
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||| |||||||  |||||| |||||||| ||  |||| || || || |||||||||| ||||    | |||||||||||    
T  30939411 acctccgttcctttttaattgtcatattttgattttttacacaaaccaagacggtcaataaatggtagtacttttgatacaattgtttttacttttacta 30939312  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  30939311 taatgaccttattaatttaa 30939292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 31370057 - 31369938
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||||||||||||||||| |||||| ||  |||||||||| |||||||| ||| |||| || || || ||||||||||  || ||   ||||||||||||    
T  31370057 acctccgtttctttttaagtgtcactttaagacattttacacaaaccaatacattcaataaatgttattacttttgatagaacaatgcatacttttacta 31369958  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| ||||||||| |||||    
T  31369957 taataaccttatttgtttaa 31369938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 327 - 434
Target Start/End: Complemental strand, 44549887 - 44549780
Alignment:
Q  327 ttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgaccttat 426  Q
    |||||||| ||||  ||||| ||||||   ||| |||||| ||||| ||||  ||||||||||||| ||||||| |||||||||| ||||||||||||||    
T  44549887 ttttaattatcactgtttgatattttatataaatcaaaacgatcaataattattactacttttgatacaataagttatacttttattataatgaccttat 44549788  T
Q  427 ttatttaa 434  Q
    | ||||||    
T  44549787 tcatttaa 44549780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 325 - 427
Target Start/End: Original strand, 26933770 - 26933872
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctt 424  Q
    ||||||||  ||||| || ||||||||||| ||||||||||||||||| || || ||||||||||||  ||||||   ||||||||||||||||  ||||    
T  26933770 ctttttaaccgtcactttgtgacattttacacaaaccaaaacaatcaataaatgttactacttttgacacaataattgatacttttactataatatcctt 26933869  T
Q  425 att 427  Q
    |||    
T  26933870 att 26933872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 328 - 434
Target Start/End: Complemental strand, 40412186 - 40412080
Alignment:
Q  328 tttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgaccttatt 427  Q
    ||||| |||||  ||||||||||||||  |||  || ||||| || ||||| ||||| |||||||| |||||| |||| |||||||||||||||||||||    
T  40412186 tttaactgtcattttttgacattttacataaattaagacaattaataattgttactatttttgatgtaataagttatatttttactataatgaccttatt 40412087  T
Q  428 tatttaa 434  Q
     ||||||    
T  40412086 catttaa 40412080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 315 - 424
Target Start/End: Original strand, 9220029 - 9220138
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||||||||||||||||||| |||||| ||||||| |||| ||| ||||| || || |  ||||||||||||| ||||    | |||||||||||    
T  9220029 acctccgtttctttttaattgtcactttttgaaattttacacaaaacaagacaattaataaatcttactacttttgatacaattgtttttacttttacta 9220128  T
Q  415 taatgacctt 424  Q
    ||| ||||||    
T  9220129 taaagacctt 9220138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 325 - 400
Target Start/End: Original strand, 29832358 - 29832433
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataag 400  Q
    ||||||||||||| | ||||||||||||||  | ||||| |||||||| ||||| ||| |||||||||||||||||    
T  29832358 ctttttaattgtctccttttgacattttacttataccaagacaatcaataattgttacaacttttgatgcaataag 29832433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 315 - 418
Target Start/End: Complemental strand, 47751786 - 47751683
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||| ||| ||||||||||||||| || ||||||||||| |||||||||| |||  | || || ||||| ||||||| ||||||   ||||||||||||    
T  47751786 acctcagttcctttttaattgtcactttgtgacattttacacaaaccaaaataatttataaatgttactatttttgatacaataattgatacttttacta 47751687  T
Q  415 taat 418  Q
    ||||    
T  47751686 taat 47751683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 424
Target Start/End: Complemental strand, 49089167 - 49089053
Alignment:
Q  310 ctaccacctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagcta-tactt 408  Q
    |||| ||||||||| ||||||||||||||| |||||| ||||||| | |||||| |||||||| || |  |||||| |||||| ||||  | || |||||    
T  49089167 ctactacctccgttcctttttaattgtcactttttgatattttactcgaaccaagacaatcaataaatattactacgtttgatacaat-tgttattactt 49089069  T
Q  409 ttactataatgacctt 424  Q
    ||||||||||||||||    
T  49089068 ttactataatgacctt 49089053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 329 - 427
Target Start/End: Complemental strand, 18781721 - 18781623
Alignment:
Q  329 ttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgaccttatt 427  Q
    ||||||||||  ||| |||||||||| ||||  || | |||||| ||||  || |||||||||||||||||| |||||||||| |||||| ||||||||    
T  18781721 ttaattgtcatttttcgacattttacacaaattaagataatcaataattattattacttttgatgcaataagatatacttttattataattaccttatt 18781623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 315 - 397
Target Start/End: Complemental strand, 42133293 - 42133211
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaat 397  Q
    |||| |||||||||||||||||||| |||  | ||||||| ||||||||||||||||| || || ||||| ||||||| ||||    
T  42133293 accttcgtttctttttaattgtcacttttcaatattttacacaaaccaaaacaatcaataaatgttactatttttgatacaat 42133211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 320 - 372
Target Start/End: Complemental strand, 7243058 - 7243005
Alignment:
Q  320 cgtttctttttaattgtca-cattttgacattttacgcaaaccaaaacaatcaa 372  Q
    ||||||||||||||||| | |||||||||||||||| |||||||||||||||||    
T  7243058 cgtttctttttaattgttaacattttgacattttacacaaaccaaaacaatcaa 7243005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 363
Target Start/End: Original strand, 38009754 - 38009802
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaa 363  Q
    ||||||||| ||||||||||||||||||||||| |||||| ||||||||    
T  38009754 acctccgttcctttttaattgtcacattttgactttttacacaaaccaa 38009802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 43888237 - 43888119
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagcta-tacttttact 413  Q
    |||| |||| ||||||||||||||| |||||| |||||||  ||||||| | |||||| || || |||||| |||||| ||||  |||| ||||||||||    
T  43888237 accttcgttcctttttaattgtcactttttgatattttacataaaccaagagaatcaataaatgttactac-tttgatacaat-tgctattacttttact 43888140  T
Q  414 ataatgaccttatttatttaa 434  Q
    ||||||||||| || ||||||    
T  43888139 ataatgaccttgttaatttaa 43888119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 399
Target Start/End: Complemental strand, 45725792 - 45725708
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataa 399  Q
    ||||||||| ||||||||||||||  |||||||||||||| ||||| || | | |||| || || ||||||||||||| ||||||    
T  45725792 acctccgttcctttttaattgtcattttttgacattttacacaaacaaataaagtcaataaatgttactacttttgatacaataa 45725708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 434
Target Start/End: Original strand, 52057466 - 52057558
Alignment:
Q  342 tttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||||  ||||||| || |  ||||||||||||| |||||    |||||||||||||||| | |||||||||||||    
T  52057466 tttgacattttacacaaaccaatccaatcaataaatattactacttttgatacaatacttcatacttttactataataatcttatttatttaa 52057558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 372
Target Start/End: Original strand, 33751333 - 33751388
Alignment:
Q  317 ctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaa 372  Q
    ||||||| |||||||||||| ||||||||||||||||| ||||| || ||||||||    
T  33751333 ctccgttcctttttaattgttacattttgacattttacacaaactaagacaatcaa 33751388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 322 - 434
Target Start/End: Original strand, 35381414 - 35381522
Alignment:
Q  322 tttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgac 421  Q
    |||||||||||||||||||||||||||||||||  |||  || | | | ||  |||| |||||||||||||    |||| | |||||||| |||||||||    
T  35381414 tttctttttaattgtcacattttgacattttacataaattaagatagttaatgattgttactacttttgat----taagttgtacttttattataatgac 35381509  T
Q  422 cttatttatttaa 434  Q
    |||||| ||||||    
T  35381510 cttattcatttaa 35381522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 315 - 397
Target Start/End: Complemental strand, 3036639 - 3036557
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaat 397  Q
    ||||||||| |||||||||||||| ||||| |||||||||  ||| || ||||||||| || || || |||||||||| ||||    
T  3036639 acctccgttcctttttaattgtcatatttttacattttacataaatcataacaatcaataaatgttattacttttgatacaat 3036557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 315 - 417
Target Start/End: Complemental strand, 29511299 - 29511197
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||||||||  |||||||||||||| ||||||||||||||  ||||||| | | |  | || || ||||||||||||| ||| ||  |||||||||||||    
T  29511299 acctccgttcatttttaattgtcaccttttgacattttacataaaccaagaaatttcataaatgttactacttttgatacaacaatgtatacttttacta 29511200  T
Q  415 taa 417  Q
    |||    
T  29511199 taa 29511197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 315 - 372
Target Start/End: Original strand, 38027563 - 38027620
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaa 372  Q
    ||||||||| ||||||||||||||| |||||| |||||||  ||||||||||| ||||    
T  38027563 acctccgttcctttttaattgtcactttttgatattttacataaaccaaaacactcaa 38027620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 434
Target Start/End: Original strand, 4201377 - 4201425
Alignment:
Q  386 ttttgatgcaataagctatacttttactataatgaccttatttatttaa 434  Q
    |||| |||||||||| | |||||||||||||||||||||||| ||||||    
T  4201377 tttttatgcaataagttgtacttttactataatgaccttattcatttaa 4201425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 326 - 390
Target Start/End: Complemental strand, 42629562 - 42629498
Alignment:
Q  326 tttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttg 390  Q
    |||||||||||||  |||||| ||||||| |||||||| |||||||| || || |||||||||||    
T  42629562 tttttaattgtcattttttgatattttacacaaaccaagacaatcaataaatgttactacttttg 42629498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 434
Target Start/End: Complemental strand, 47428714 - 47428666
Alignment:
Q  386 ttttgatgcaataagctatacttttactataatgaccttatttatttaa 434  Q
    |||||||||||||||  ||||||||||||||||||| ||||| ||||||    
T  47428714 ttttgatgcaataagtaatacttttactataatgacattattcatttaa 47428666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 363
Target Start/End: Original strand, 8456900 - 8456947
Alignment:
Q  316 cctccgtttctttttaattgtcacattttgacattttacgcaaaccaa 363  Q
    |||||||| ||||||||||||||||||||||| || ||| ||||||||    
T  8456900 cctccgttcctttttaattgtcacattttgactttctacacaaaccaa 8456947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 390
Target Start/End: Complemental strand, 17698718 - 17698643
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttg 390  Q
    |||| |||| |||||||||||||| |||||||||||||||  ||||||| | | ||||  |||| |||||||||||    
T  17698718 accttcgttcctttttaattgtcatattttgacattttacataaaccaagatagtcaatgattgttactacttttg 17698643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 418
Target Start/End: Complemental strand, 19399789 - 19399686
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||||||||||||||||| | || | |||||||||||||| |||||||| ||| |||| || || ||||  || | || ||||||  |||||||||| ||    
T  19399789 acctccgtttctttttaactttcgctttttgacattttacacaaaccaagacactcaataaatgttactttttcttatacaataatttatacttttaata 19399690  T
Q  415 taat 418  Q
    ||||    
T  19399689 taat 19399686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 354
Target Start/End: Complemental strand, 36409008 - 36408969
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttac 354  Q
    ||||||||| |||||||||||||| |||||||||||||||    
T  36409008 acctccgttcctttttaattgtcatattttgacattttac 36408969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 354
Target Start/End: Complemental strand, 36423174 - 36423135
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttac 354  Q
    ||||||||| |||||||||||||| |||||||||||||||    
T  36423174 acctccgttcctttttaattgtcatattttgacattttac 36423135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 354
Target Start/End: Original strand, 52257779 - 52257818
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttac 354  Q
    |||||||||||||||||| |||||| ||||||||||||||    
T  52257779 acctccgtttctttttaactgtcactttttgacattttac 52257818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 368
Target Start/End: Original strand, 56499606 - 56499653
Alignment:
Q  321 gtttctttttaattgtcacattttgacattttacgcaaaccaaaacaa 368  Q
    ||||||||||||||||||| ||||||| |||||| |||||||| ||||    
T  56499606 gtttctttttaattgtcaccttttgactttttacacaaaccaagacaa 56499653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 457
Target Start/End: Original strand, 5519272 - 5519305
Alignment:
Q  424 tatttatttaagggttaaatatgtttttggtccc 457  Q
    |||||||| |||||||||||||||||||||||||    
T  5519272 tatttattaaagggttaaatatgtttttggtccc 5519305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 354
Target Start/End: Complemental strand, 34361744 - 34361707
Alignment:
Q  317 ctccgtttctttttaattgtcacattttgacattttac 354  Q
    ||||||| ||||||||||||||| ||||||||||||||    
T  34361744 ctccgttactttttaattgtcactttttgacattttac 34361707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 365
Target Start/End: Original strand, 51654862 - 51654911
Alignment:
Q  316 cctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaa 365  Q
    |||| ||| ||||||||| ||||||||||||| |||||| ||||||||||    
T  51654862 cctctgttcctttttaatcgtcacattttgactttttacacaaaccaaaa 51654911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 457
Target Start/End: Complemental strand, 55811580 - 55811547
Alignment:
Q  424 tatttatttaagggttaaatatgtttttggtccc 457  Q
    |||| |||||||||||||||||||||||||||||    
T  55811580 tattaatttaagggttaaatatgtttttggtccc 55811547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 425 - 457
Target Start/End: Original strand, 5496951 - 5496983
Alignment:
Q  425 atttatttaagggttaaatatgtttttggtccc 457  Q
    ||||||| |||||||||||||||||||||||||    
T  5496951 atttattaaagggttaaatatgtttttggtccc 5496983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 429 - 457
Target Start/End: Complemental strand, 27285563 - 27285535
Alignment:
Q  429 atttaagggttaaatatgtttttggtccc 457  Q
    |||||||||||||||||||||||||||||    
T  27285563 atttaagggttaaatatgtttttggtccc 27285535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 429 - 457
Target Start/End: Complemental strand, 28426827 - 28426799
Alignment:
Q  429 atttaagggttaaatatgtttttggtccc 457  Q
    |||||||||||||||||||||||||||||    
T  28426827 atttaagggttaaatatgtttttggtccc 28426799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 429 - 457
Target Start/End: Complemental strand, 36703915 - 36703887
Alignment:
Q  429 atttaagggttaaatatgtttttggtccc 457  Q
    |||||||||||||||||||||||||||||    
T  36703915 atttaagggttaaatatgtttttggtccc 36703887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 354
Target Start/End: Complemental strand, 47428772 - 47428736
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttac 354  Q
    |||||| |||||||||||||||||||||| |||||||    
T  47428772 tccgttcctttttaattgtcacattttgatattttac 47428736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 429 - 457
Target Start/End: Original strand, 49332427 - 49332455
Alignment:
Q  429 atttaagggttaaatatgtttttggtccc 457  Q
    |||||||||||||||||||||||||||||    
T  49332427 atttaagggttaaatatgtttttggtccc 49332455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #105
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 425 - 457
Target Start/End: Original strand, 55938039 - 55938071
Alignment:
Q  425 atttatttaagggttaaatatgtttttggtccc 457  Q
    ||||||||||||||||||||| |||||||||||    
T  55938039 atttatttaagggttaaatatatttttggtccc 55938071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 105; Significance: 3e-52; HSPs: 83)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 318 - 434
Target Start/End: Original strand, 10359222 - 10359338
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataa 417  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  10359222 tccgtttctttttaattgtcacattttgacattttacacaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactatga 10359321  T
Q  418 tgaccttatttatttaa 434  Q
    |||||||||| ||||||    
T  10359322 tgaccttattcatttaa 10359338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 310 - 434
Target Start/End: Complemental strand, 38910513 - 38910389
Alignment:
Q  310 ctaccacctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttt 409  Q
    |||| ||||||||| |||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  38910513 ctactacctccgttcctttttaattgtcacattttgacattttacacaaaccaagataatcaacaattgatactacttttgatgcaataagctatacttt 38910414  T
Q  410 tactataatgaccttatttatttaa 434  Q
    |||||||||||| ||||| ||||||    
T  38910413 tactataatgactttattcatttaa 38910389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 39073279 - 39073160
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39073279 acctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttttacta 39073180  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| |||||||| ||||||    
T  39073179 taataaccttattcatttaa 39073160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 310 - 434
Target Start/End: Complemental strand, 8825297 - 8825173
Alignment:
Q  310 ctaccacctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttt 409  Q
    |||| ||||||||| |||||||||| ||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  8825297 ctactacctccgttcctttttaattatcacattttgacattttacacaaatcaagacaatcaacaattgatactacttttgatgcaataaactatacttt 8825198  T
Q  410 tactataatgaccttatttatttaa 434  Q
    |||||||||||||||||| ||||||    
T  8825197 tactataatgaccttattcatttaa 8825173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 2673962 - 2674081
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  2673962 acctccgttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatattacttttgatgcaataagctatacttttacta 2674061  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||  ||||| ||||||    
T  2674062 taatgattttattcatttaa 2674081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 318 - 432
Target Start/End: Original strand, 18020755 - 18020869
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataa 417  Q
    |||||| |||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18020755 tccgttcctttttaattgtcacattttgacattttacacagaccaagacaatcaacaattgatactacttttaatgcaataagctatacttttactataa 18020854  T
Q  418 tgaccttatttattt 432  Q
    |||||||||| ||||    
T  18020855 tgaccttattcattt 18020869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 320 - 434
Target Start/End: Original strand, 26854084 - 26854198
Alignment:
Q  320 cgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatg 419  Q
    |||| |||||||||||||||||||||||||||||| |||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  26854084 cgttcctttttaattgtcacattttgacattttacacaaaccaagataatcaataattgatactacttttgatgcaataagctatacttttactataatg 26854183  T
Q  420 accttatttatttaa 434  Q
    |||||||| ||||||    
T  26854184 accttattcatttaa 26854198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 318 - 434
Target Start/End: Original strand, 6754166 - 6754282
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataa 417  Q
    |||||| |||||||||||||||||||||||||||||| |||||||| |||||||| |||||||  |||||||||||||||||||||||||||||||||||    
T  6754166 tccgttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaataattgatcatacttttgatgcaataagctatacttttactataa 6754265  T
Q  418 tgaccttatttatttaa 434  Q
    |||||||||| ||||||    
T  6754266 tgaccttattcatttaa 6754282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 7579651 - 7579771
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactac-ttttgatgcaataagctatacttttact 413  Q
    ||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||    
T  7579651 acctccgttcctttttaattgtcacattttgatattttacacaaaccaaaacaatcaacaattgatactactttttgttgcaataaactatacttttact 7579750  T
Q  414 ataatgaccttatttatttaa 434  Q
    |||||||||||||| ||||||    
T  7579751 ataatgaccttattcatttaa 7579771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 1087917 - 1088036
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  1087917 acctccgtttctttttaattgtcacattttaacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataaactatatttttacta 1088016  T
Q  415 taatgaccttatttatttaa 434  Q
    ||| ||| ||||| ||||||    
T  1088017 taacgactttattcatttaa 1088036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 4175464 - 4175583
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||||||||||||||||||| |||| ||| ||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  4175464 acctccgttcctttttaattgtcacattttgacattttacacaaagcaagacaataaacaattgatactacttttgatacaataagctatacttttacta 4175563  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| |||||||| ||||||    
T  4175564 taataaccttattcatttaa 4175583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 320 - 434
Target Start/End: Complemental strand, 38702371 - 38702257
Alignment:
Q  320 cgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatg 419  Q
    |||| |||||||||||||| ||||| | |||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38702371 cgttcctttttaattgtcatattttaatattttacataaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttttactataatg 38702272  T
Q  420 accttatttatttaa 434  Q
    |||||||||||||||    
T  38702271 accttatttatttaa 38702257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 317 - 434
Target Start/End: Complemental strand, 4098564 - 4098447
Alignment:
Q  317 ctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactata 416  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||| |||||||||| ||||||| ||||| |||||||||    
T  4098564 ctccgtttctttttaattgtcacattttgacattttacacaaaccaagacaatcaaaaattgatattacttttgatacaataagttatacctttactata 4098465  T
Q  417 atgaccttatttatttaa 434  Q
    ||||||||||| ||||||    
T  4098464 atgaccttattcatttaa 4098447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 326 - 434
Target Start/End: Original strand, 24074833 - 24074941
Alignment:
Q  326 tttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctta 425  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  24074833 tttttaattgtcacattttgacattttacacaaaccaaaacaatcaataattgttactacttttgatgcaataagttatacttttactataatgaactta 24074932  T
Q  426 tttatttaa 434  Q
    || ||||||    
T  24074933 ttcatttaa 24074941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 326 - 434
Target Start/End: Original strand, 38017272 - 38017380
Alignment:
Q  326 tttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctta 425  Q
    ||||||||||||||||||| ||||||||| ||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  38017272 tttttaattgtcacattttaacattttacacaaacgaagacaatcaacaattgatattacttttgatgcaataagctatacttttactataatgacctta 38017371  T
Q  426 tttatttaa 434  Q
    || ||||||    
T  38017372 ttcatttaa 38017380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 9076306 - 9076187
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||| |||| |||||||||||||| | ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||    
T  9076306 accttcgttcctttttaattgtcataatttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataaattatacttttacta 9076207  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  9076206 taatgaccttattcatttaa 9076187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 12665093 - 12664974
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||| |||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||| | | |||||||||||    
T  12665093 acctccgttcctttttaattgtcatattttgacattttacataaaccaagacaatcaacaattgatactacttttgatgcaatatgatgtacttttacta 12664994  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  12664993 taatgaccttattcatttaa 12664974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 12869883 - 12870002
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||||||||  ||||||||||||||||||||| ||||||  |||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||    
T  12869883 acctccgttcatttttaattgtcacattttgatattttatacaaaccaagataatcaacaattgatactacttttgatgcaataagttatacttttacta 12869982  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  12869983 taatgaccttattcatttaa 12870002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 25344195 - 25344076
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||||||||||||||||||| |||||||| |||| ||| |||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  25344195 acctccgttcctttttaattgtcacattttgtcattttacacaaatcaagacaatcaacaattgatcctacttttgatgcaataagctatatttttacta 25344096  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| |||||||| ||||||    
T  25344095 taataaccttattcatttaa 25344076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 34261547 - 34261428
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||| ||| |||||||||||||| ||||||||||||||  |||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  34261547 acctctgttcctttttaattgtcatattttgacattttagacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttacta 34261448  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  34261447 taatgaccttattcatttaa 34261428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 38363424 - 38363305
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||| |||| |||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  38363424 accttcgttcctttttaattgtcacaatttgacattttacacaaaccaagacaatcaacaattgatactaattttgatgcaataaactatacttttacta 38363325  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||| ||||| ||||||    
T  38363324 taatgactttattcatttaa 38363305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 310 - 434
Target Start/End: Complemental strand, 6072692 - 6072568
Alignment:
Q  310 ctaccacctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttt 409  Q
    |||| ||||||||| |||||||||| ||||||||  ||||||||| ||||  || |||||||||||||||||||||||||||||||||||| ||||||||    
T  6072692 ctactacctccgttcctttttaattatcacatttaaacattttacacaaattaagacaatcaacaattgatactacttttgatgcaataagttatacttt 6072593  T
Q  410 tactataatgaccttatttatttaa 434  Q
    |||||||||||||||||| ||||||    
T  6072592 tactataatgaccttattcatttaa 6072568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 4985159 - 4985278
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||||||||||||||||||| || ||||| |||||||| | ||| ||||||||||||||||||||| |||| ||||||||    
T  4985159 acctccgttcctttttaattgtcacattttgacattttacacataccaagacaatcaatagttgttactacttttgatgcaataagttatatttttacta 4985258  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  4985259 taatgaccttattcatttaa 4985278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 18795018 - 18794899
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||| ||||| ||||||||||||| |||| ||| ||||||||||||||||  ||||||||||| ||||||||||||||||||||    
T  18795018 acctccgttcctttttaattttcacactttgacattttacacaaatcaagacaatcaacaattgatcatacttttgatgtaataagctatacttttacta 18794919  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  18794918 taatgaccttattcatttaa 18794899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 28024243 - 28024362
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||| ||||||||||||||| | |||||| |||||||| ||||  ||||||||||||||||||||| |||||||||||||    
T  28024243 acctccgttcctttttaattgtcatattttgacattttacaccaaccaagacaatcaataattattactacttttgatgcaataagttatacttttacta 28024342  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  28024343 taatgaccttattcatttaa 28024362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 317 - 434
Target Start/End: Original strand, 28446971 - 28447088
Alignment:
Q  317 ctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactata 416  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||| | |||||| ||||| ||||| ||||||| ||||||| |||||||||||||||    
T  28446971 ctccgtttctttttaattgtcactttttgacattttacacaaaccaagataatcaataattgttactatttttgatacaataagttatacttttactata 28447070  T
Q  417 atgaccttatttatttaa 434  Q
    ||||||||||| ||||||    
T  28447071 atgaccttattcatttaa 28447088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 318 - 434
Target Start/End: Complemental strand, 7404084 - 7403968
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataa 417  Q
    |||||| |||||||||||||||||||||| |||||||  ||||||| | |||||||||||||||||| ||||||||||||||  ||||||||||||||||    
T  7404084 tccgttcctttttaattgtcacattttgatattttacataaaccaagataatcaacaattgatactatttttgatgcaataaattatacttttactataa 7403985  T
Q  418 tgaccttatttatttaa 434  Q
    |||||||||| ||||||    
T  7403984 tgaccttattcatttaa 7403968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 14793774 - 14793893
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||||| || |||||||||||||||||||||||||||||| |||||||| | |||||| ||||  ||||| ||||||||||||||| |||||||||||||    
T  14793774 acctcccttcctttttaattgtcacattttgacattttacacaaaccaatataatcaataattattactatttttgatgcaataagttatacttttacta 14793873  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  14793874 taatgaccttattcatttaa 14793893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 320 - 434
Target Start/End: Complemental strand, 42911780 - 42911666
Alignment:
Q  320 cgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatg 419  Q
    |||| |||||||||||||||||||||| ||||||| |||||||| |||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||    
T  42911780 cgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaataattgttactacttttgatgcaataagttatacttttactataatg 42911681  T
Q  420 accttatttatttaa 434  Q
    | | |||| ||||||    
T  42911680 atcatattcatttaa 42911666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 22582706 - 22582588
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||  ||||||||||||||||||  |||| ||| ||||||||||||| ||||||||||||||||||||| |||||||| |||||    
T  22582706 acctccgttcctttttaata-tcacattttgacattttatacaaatcaagacaatcaacaatttatactacttttgatgcaataaactatacttgtacta 22582608  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  22582607 taatgaccttattcatttaa 22582588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 310 - 434
Target Start/End: Original strand, 1297716 - 1297841
Alignment:
Q  310 ctaccacctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactactttt-gatgcaataagctatactt 408  Q
    |||| |||||| || |||||||||||| ||||||||||||||||   |||| || ||||||||||||| |||||| |||| |||||||||||||||||||    
T  1297716 ctactacctccattcctttttaattgttacattttgacattttatataaactaagacaatcaacaattaatactattttttgatgcaataagctatactt 1297815  T
Q  409 ttactataatgaccttatttatttaa 434  Q
    ||||||||||||||||||| ||||||    
T  1297816 ttactataatgaccttattcatttaa 1297841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 317 - 434
Target Start/End: Complemental strand, 36239691 - 36239574
Alignment:
Q  317 ctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactata 416  Q
    |||||||  ||||||||||||||||||||||||||||| || | ||| |||||||| | ||| ||||||||||||||||||||| |||| ||||||||||    
T  36239691 ctccgttcatttttaattgtcacattttgacattttacacatatcaagacaatcaatagttgttactacttttgatgcaataagttatatttttactata 36239592  T
Q  417 atgaccttatttatttaa 434  Q
    ||||||||||| ||||||    
T  36239591 atgaccttattaatttaa 36239574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 317 - 434
Target Start/End: Complemental strand, 40199021 - 40198904
Alignment:
Q  317 ctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactata 416  Q
    |||||||  ||||||||||| || |||||| ||||||| || | ||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  40199021 ctccgttcttttttaattgttactttttgatattttacacagatcaagacaatcaacaattgttactacttttgatgcaataagttatacttttactata 40198922  T
Q  417 atgaccttatttatttaa 434  Q
    ||||||||||| ||||||    
T  40198921 atgaccttattcatttaa 40198904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 9127335 - 9127454
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||||||||||||||||||||||||||||  ||||||||| | ||||  |||| ||  ||||||||||||||||| | |||||||||||    
T  9127335 acctccgttcctttttaattgtcacattttgacattttacataaaccaaaatagtcaatgattgttatcacttttgatgcaataagttgtacttttacta 9127434  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  9127435 taatgaccttattcatttaa 9127454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 16124244 - 16124363
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||||||||||||||||||||||||||||  ||||||| | | ||||  |||| ||||||||||||||||||||| | || ||||||||    
T  16124244 acctccgttcctttttaattgtcacattttgacattttacataaaccaatatagtcaatgattgttactacttttgatgcaataagttgtatttttacta 16124343  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  16124344 taatgaccttattcatttaa 16124363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 315 - 418
Target Start/End: Complemental strand, 18465932 - 18465829
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||||| || |||||||||| ||| ||||||| ||||| |  ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  18465932 acctccattcctttttaattatcatattttgatatttttcagaaaccaaaacaatcaacaattgatactacttttgatgtaataagttatacttttacta 18465833  T
Q  415 taat 418  Q
    ||||    
T  18465832 taat 18465829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 332 - 423
Target Start/End: Original strand, 31546000 - 31546091
Alignment:
Q  332 attgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacct 423  Q
    |||||||| |||||||||||||| |||||||| |||||||| ||||| ||||||||||||||||||||| ||||||||||||| ||||||||    
T  31546000 attgtcaccttttgacattttacacaaaccaagacaatcaataattgttactacttttgatgcaataagttatacttttactacaatgacct 31546091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 310 - 429
Target Start/End: Original strand, 38502783 - 38502902
Alignment:
Q  310 ctaccacctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttt 409  Q
    |||| ||||| |||||||||||||||| ||||||| ||||||||| |||||||||| | ||||  |||| |||||||||||||| |||||| | ||||||    
T  38502783 ctactacctctgtttctttttaattgttacattttaacattttacacaaaccaaaatagtcaatgattgttactacttttgatgtaataagttgtacttt 38502882  T
Q  410 tactataatgaccttattta 429  Q
    |||||||||||||| |||||    
T  38502883 tactataatgacctcattta 38502902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 318 - 434
Target Start/End: Complemental strand, 6689831 - 6689715
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataa 417  Q
    |||||| |||||||||||| |  |||| ||||||||| |||| ||||||||| || ||||| ||||| ||||||| ||||||||||||||||||||||||    
T  6689831 tccgttcctttttaattgttatttttttacattttacacaaatcaaaacaattaataattgttactatttttgatacaataagctatacttttactataa 6689732  T
Q  418 tgaccttatttatttaa 434  Q
    ||| |||||| ||||||    
T  6689731 tgatcttattcatttaa 6689715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 2133892 - 2134009
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||  |||||||||| |||  ||||||||||||||  ||||||| |||||||| ||||| ||||| ||||||||||||||| |||||||||||||    
T  2133892 acctccgtgcctttttaattatcat-ttttgacattttacataaaccaagacaatcaataattgttacta-ttttgatgcaataagttatacttttacta 2133989  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  2133990 taatgaccttattaatttaa 2134009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 8229788 - 8229906
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||| |||| ||||||||||||||| ||||||||| |||| ||||  || |||||||| ||||| || |||||||||||||||||| |||||||||||||    
T  8229788 accttcgttcctttttaattgtcac-ttttgacatcttacacaaattaagacaatcaataattgttaatacttttgatgcaataagttatacttttacta 8229886  T
Q  415 taatgaccttatttatttaa 434  Q
    || |||||||||| ||||||    
T  8229887 tagtgaccttattcatttaa 8229906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 315 - 433
Target Start/End: Original strand, 18437307 - 18437425
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||||||||||||| |||||| ||||||| |||||||| |||||||| || || ||| | ||||||| |||||   |||||||||||||    
T  18437307 acctccgttcctttttaattgtcactttttgatattttacacaaaccaatacaatcaataaatgttaccatttttgatacaatactttatacttttacta 18437406  T
Q  415 taatgaccttatttattta 433  Q
    |||| ||||||||||||||    
T  18437407 taataaccttatttattta 18437425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 325 - 434
Target Start/End: Complemental strand, 4017639 - 4017530
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctt 424  Q
    ||||||||||||||| |||||||||||||| |||| ||| | |||||| ||||| |  |||||||||||||||||| ||| ||||||||||||| |||||    
T  4017639 ctttttaattgtcactttttgacattttacacaaatcaagataatcaataattgtttttacttttgatgcaataagttattcttttactataataacctt 4017540  T
Q  425 atttatttaa 434  Q
    ||| ||||||    
T  4017539 attcatttaa 4017530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 318 - 434
Target Start/End: Original strand, 39893796 - 39893912
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataa 417  Q
    |||||| ||||||||||||||| |||| ||||||||| |||||||||| |||||| || || ||||||||||||| ||||    | ||||||||||||||    
T  39893796 tccgttcctttttaattgtcactttttaacattttacacaaaccaaaataatcaataagtgttactacttttgatacaattgtttttacttttactataa 39893895  T
Q  418 tgaccttatttatttaa 434  Q
    |||||||||| ||||||    
T  39893896 tgaccttattaatttaa 39893912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 7408566 - 7408447
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||| |||| ||||||||||||||  |||||||||||||| ||||||||||||||||| ||    || |||||||||| ||||||  |||||||||||||    
T  7408566 accttcgttcctttttaattgtcatcttttgacattttacacaaaccaaaacaatcaataaacattaatacttttgatacaataatttatacttttacta 7408467  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| |||||||| ||||||    
T  7408466 taataaccttattcatttaa 7408447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 317 - 434
Target Start/End: Complemental strand, 5119411 - 5119294
Alignment:
Q  317 ctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactata 416  Q
    ||||||| ||||||||||||||  |||| | ||||||  ||||  || |||||||| ||||| | ||||||||||||||||||| |||||||||||||||    
T  5119411 ctccgttcctttttaattgtcattttttaatattttatacaaattaatacaatcaataattgtttctacttttgatgcaataagttatacttttactata 5119312  T
Q  417 atgaccttatttatttaa 434  Q
    || |||||||| ||||||    
T  5119311 ataaccttattaatttaa 5119294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 318 - 434
Target Start/End: Original strand, 25027562 - 25027678
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataa 417  Q
    |||||||||||||||||||||| || |||||||||||  |||| || |||||||| || || ||||||||||||| ||||||   |||||||||||||||    
T  25027562 tccgtttctttttaattgtcactttgtgacattttacataaactaagacaatcaataaatgttactacttttgatacaataattgatacttttactataa 25027661  T
Q  418 tgaccttatttatttaa 434  Q
    |  ||||||| ||||||    
T  25027662 tatccttattcatttaa 25027678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 3686925 - 3686806
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||||| ||| ||||||||| |||||||||||| |||||   |||||||||||||||| || || | ||||||||||| ||||||  | || ||||||||    
T  3686925 acctccatttatttttaattatcacattttgacgttttatataaaccaaaacaatcaataaatgttgctacttttgatacaataatttctatttttacta 3686826  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| |||||||||||||||    
T  3686825 taataaccttatttatttaa 3686806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 315 - 385
Target Start/End: Original strand, 10889172 - 10889242
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactac 385  Q
    |||||||||||||||||||||||||||||| |||||||||  ||||||| |||||||||||||||| ||||    
T  10889172 acctccgtttctttttaattgtcacattttaacattttacataaaccaagacaatcaacaattgatcctac 10889242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 315 - 423
Target Start/End: Original strand, 4427389 - 4427498
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgata-ctacttttgatgcaataagctatacttttact 413  Q
    ||||||||| ||||||||||||||| |||||| ||||||| | || ||| |||||||  |||| ||  ||||||||||| ||||||| ||||||||||||    
T  4427389 acctccgttcctttttaattgtcactttttgatattttacacgaatcaagacaatcagtaatttattgctacttttgatacaataagttatacttttact 4427488  T
Q  414 ataatgacct 423  Q
    ||||||||||    
T  4427489 ataatgacct 4427498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 310 - 434
Target Start/End: Complemental strand, 37809999 - 37809875
Alignment:
Q  310 ctaccacctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttt 409  Q
    |||| ||||||| | ||||||||||||||| |||||| ||||||| |||||||| ||||| || || || ||||||||||||||||||    | ||||||    
T  37809999 ctactacctccgatcctttttaattgtcactttttgatattttacacaaaccaagacaattaataaatgttactacttttgatgcaattgtttttacttt 37809900  T
Q  410 tactataatgaccttatttatttaa 434  Q
    ||||||||||| ||| || ||||||    
T  37809899 tactataatgatcttgttaatttaa 37809875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 12784427 - 12784545
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||| ||| |||||||||| |||| |||||||||||||| |||||||| |||||||| || || ||||||||||||| ||||  | | |||||||||||    
T  12784427 acctctgttcctttttaattctcactttttgacattttacacaaaccaagacaatcaataaatgttactacttttgatacaat-tgttttacttttacta 12784525  T
Q  415 taatgaccttatttatttaa 434  Q
     ||||| |||||| ||||||    
T  12784526 aaatgatcttattaatttaa 12784545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 317 - 400
Target Start/End: Original strand, 38297511 - 38297594
Alignment:
Q  317 ctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataag 400  Q
    ||||||| ||||||||||||||| |||| ||||||||| |||| ||| |||||||| ||||| | |||||||||||||||||||    
T  38297511 ctccgttcctttttaattgtcactttttaacattttacacaaaacaagacaatcaataattgtttctacttttgatgcaataag 38297594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 328 - 434
Target Start/End: Complemental strand, 32389208 - 32389102
Alignment:
Q  328 tttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgaccttatt 427  Q
    |||||||||||| |||| |||||||||  ||||||| |||||||| || || ||||||||||||| |||| |  | |||||||||||||||| |||||||    
T  32389208 tttaattgtcactttttaacattttacataaaccaagacaatcaataagtgttactacttttgatacaattatttttacttttactataatggccttatt 32389109  T
Q  428 tatttaa 434  Q
     ||||||    
T  32389108 aatttaa 32389102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 341 - 434
Target Start/End: Complemental strand, 4694973 - 4694880
Alignment:
Q  341 ttttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgaccttatttatttaa 434  Q
    |||| ||||||| | |||||||| | |||||| ||||| || ||||||||||| |||||| ||||||||||||||||||||||| || ||||||    
T  4694973 tttttacatttttcacaaaccaagataatcaataattgctaatacttttgatgtaataagttatacttttactataatgaccttgttcatttaa 4694880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 6008120 - 6007999
Alignment:
Q  315 acctccgtttctttttaattgtcacatttt-gacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatactttt-ac 412  Q
    ||||||||| ||||||||||||||| |||| || ||||||| |||||||| |||||||| ||||| ||||||||||||| |||| |  |||| |||| ||    
T  6008120 acctccgttcctttttaattgtcacttttttgatattttacacaaaccaatacaatcaataattgttactacttttgatacaatgatttatatttttaac 6008021  T
Q  413 tataatgaccttatttatttaa 434  Q
    ||||||  ||||||| ||||||    
T  6008020 tataatagccttattaatttaa 6007999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 326 - 434
Target Start/End: Original strand, 30368130 - 30368238
Alignment:
Q  326 tttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctta 425  Q
    ||||||||||| ||||||| ||||||||| ||||| || |||||||| || || ||||| |||||||  |||||  | || |||||||||||| ||||||    
T  30368130 tttttaattgttacattttaacattttacacaaactaagacaatcaataaatgttactatttttgatataataatttttatttttactataataacctta 30368229  T
Q  426 tttatttaa 434  Q
    |||||||||    
T  30368230 tttatttaa 30368238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 322 - 434
Target Start/End: Original strand, 37306690 - 37306802
Alignment:
Q  322 tttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgac 421  Q
    |||||||||||||||||| |||| ||||||||| |||||||| ||||| || || || ||||||||||||| ||||      ||||||||||||||||||    
T  37306690 tttctttttaattgtcactttttaacattttacacaaaccaagacaattaataaatgttactacttttgatacaattgttcttacttttactataatgac 37306789  T
Q  422 cttatttatttaa 434  Q
    ||| || ||||||    
T  37306790 cttgttaatttaa 37306802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 12722943 - 12723062
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||| ||| |||||||||| |||| |||||||||||||| |||||||| |||||||| || |  ||||||||||||| ||||    | |||||||||||    
T  12722943 acctctgttcctttttaattctcactttttgacattttacacaaaccaagacaatcaataaatattactacttttgatacaattgtttttacttttacta 12723042  T
Q  415 taatgaccttatttatttaa 434  Q
     ||||| |||||| ||||||    
T  12723043 aaatgatcttattaatttaa 12723062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 31803559 - 31803440
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||||||||  |||||||||||||| |||||||||||||| |||| ||| ||||| || || || ||||||||||||| |||| |  | |||||||||||    
T  31803559 acctccgttcttttttaattgtcactttttgacattttacacaaatcaagacaattaataaatgttactacttttgatacaattatttttacttttacta 31803460  T
Q  415 taatgaccttatttatttaa 434  Q
     || |||||| || ||||||    
T  31803459 aaacgaccttgttaatttaa 31803440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 418
Target Start/End: Original strand, 7834055 - 7834155
Alignment:
Q  321 gtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataag---ctatacttttactataa 417  Q
    ||||||||||||||||||| |||||| ||||||| |||| ||||| |||||| ||||  |  ||||||||||||||||||   |||| ||||||||||||    
T  7834055 gtttctttttaattgtcaccttttgatattttacacaaatcaaaataatcaataattatttttacttttgatgcaataagttactattcttttactataa 7834154  T
Q  418 t 418  Q
    |    
T  7834155 t 7834155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 326 - 434
Target Start/End: Original strand, 4962183 - 4962289
Alignment:
Q  326 tttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctta 425  Q
    |||||||||||||  ||||||||||||||  ||||||| | |||||| ||  | ||  ||||||||||||||||| |||||||||||||||||||  |||    
T  4962183 tttttaattgtca--ttttgacattttacataaaccaagataatcaataaccgttatcacttttgatgcaataagttatacttttactataatgatttta 4962280  T
Q  426 tttatttaa 434  Q
    || ||||||    
T  4962281 ttcatttaa 4962289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 315 - 392
Target Start/End: Complemental strand, 18000567 - 18000491
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgat 392  Q
    ||||||||| |||||||||||| || |||||||||||||| |||||||||||||| || || || |||||||||||||    
T  18000567 acctccgttcctttttaattgttaccttttgacattttacacaaaccaaaacaattaataa-tgttactacttttgat 18000491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 325 - 434
Target Start/End: Complemental strand, 37633901 - 37633792
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctt 424  Q
    ||||||||||||||| |||||| ||||||| |||||||| ||||| || || || ||||||||||||| ||||    | ||||||||||||||||| |||    
T  37633901 ctttttaattgtcactttttgatattttacacaaaccaagacaattaataaatgttactacttttgatacaattgtttttacttttactataatgatctt 37633802  T
Q  425 atttatttaa 434  Q
     || ||||||    
T  37633801 gttaatttaa 37633792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 397
Target Start/End: Original strand, 5842980 - 5843059
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaat 397  Q
    |||||| |||||||||| |||| ||||||||||||||  ||||||| |||||||| || || ||||||||||||| ||||    
T  5842980 tccgttcctttttaattatcactttttgacattttacataaaccaagacaatcaataaatgttactacttttgatacaat 5843059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 316 - 399
Target Start/End: Complemental strand, 26906724 - 26906641
Alignment:
Q  316 cctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataa 399  Q
    |||| ||| ||||||||||||||| |||||| ||||||| |||||||||||| |||| || |  ||||||||||||| ||||||    
T  26906724 cctctgttcctttttaattgtcactttttgatattttacacaaaccaaaacattcaataaatcttactacttttgatacaataa 26906641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 326 - 433
Target Start/End: Original strand, 9958878 - 9958985
Alignment:
Q  326 tttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctta 425  Q
    |||||||||||||  |||||||| ||||| |||| ||| ||| |||| || ||  |||||||||||| ||||||  || |||||||||||||| | ||||    
T  9958878 tttttaattgtcattttttgacaatttacacaaatcaatacattcaataaatgtcactacttttgatacaataatttacacttttactataataatctta 9958977  T
Q  426 tttattta 433  Q
    ||| ||||    
T  9958978 tttgttta 9958985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 28463369 - 28463488
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||||||||||||||||| | || | |||||| ||||||| |||||||| ||| |||| || || ||||  || | || ||||||  |||||||||||||    
T  28463369 acctccgtttctttttaactatcgctttttgatattttacacaaaccaagacactcaataaatgttactttttcttatacaataatttatacttttacta 28463468  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| |||||| | ||||||    
T  28463469 taataaccttagtcatttaa 28463488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 315 - 418
Target Start/End: Original strand, 38308110 - 38308213
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||||||  ||||| |||||||||||||| |||||||| ||| |||| || || ||||  |||| || ||||||   ||||||||||||    
T  38308110 acctccgttcctttttaacggtcactttttgacattttacacaaaccaagacactcaataaatgttacttttttttatacaataattcatacttttacta 38308209  T
Q  415 taat 418  Q
    ||||    
T  38308210 taat 38308213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 349 - 434
Target Start/End: Original strand, 19831560 - 19831645
Alignment:
Q  349 ttttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgaccttatttatttaa 434  Q
    |||||| |||||||| |||||||| || || || || ||||||| ||||||  ||||  |||||||||||||||||||| ||||||    
T  19831560 ttttacacaaaccaagacaatcaataaatgttaatatttttgatacaataatttatatgtttactataatgaccttattcatttaa 19831645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 326 - 427
Target Start/End: Complemental strand, 24229172 - 24229071
Alignment:
Q  326 tttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctta 425  Q
    ||||||||||||   || ||| ||||||| |||||||| ||| |||| || || ||||||||||||| ||| ||  || |||||||||||||| ||||||    
T  24229172 tttttaattgtctttttctgatattttacacaaaccaagacattcaataaatgttactacttttgatacaacaatatacacttttactataataacctta 24229073  T
Q  426 tt 427  Q
    ||    
T  24229072 tt 24229071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 325 - 434
Target Start/End: Original strand, 37303101 - 37303210
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctt 424  Q
    |||||||||||||| |||||||||||||||  |||| ||   | || |  |||  |||||||||||||| |||||| | || |||||||||||||| |||    
T  37303101 ctttttaattgtcatattttgacattttacataaactaaggtagtcgatgattattactacttttgatgtaataagttgtatttttactataatgatctt 37303200  T
Q  425 atttatttaa 434  Q
    ||| ||||||    
T  37303201 attcatttaa 37303210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 418
Target Start/End: Original strand, 1795096 - 1795204
Alignment:
Q  310 ctaccacctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttt 409  Q
    |||||||||||||| ||||||||  || || |||||||||||||| |||| ||| ||| |||| || || ||||  || | || ||||||  ||||||||    
T  1795096 ctaccacctccgttcctttttaacggttactttttgacattttacacaaatcaagacactcaataaatgttactttttcttatacaataatttatacttt 1795195  T
Q  410 tactataat 418  Q
    |||||||||    
T  1795196 tactataat 1795204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 320 - 352
Target Start/End: Original strand, 4688810 - 4688842
Alignment:
Q  320 cgtttctttttaattgtcacattttgacatttt 352  Q
    |||||||||||||||||||||||||||||||||    
T  4688810 cgtttctttttaattgtcacattttgacatttt 4688842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 320 - 372
Target Start/End: Complemental strand, 13461240 - 13461188
Alignment:
Q  320 cgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaa 372  Q
    |||| ||||||||||||||| |||||||||||||| |||||||| ||| ||||    
T  13461240 cgttcctttttaattgtcactttttgacattttacacaaaccaatacactcaa 13461188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 317 - 397
Target Start/End: Complemental strand, 13703330 - 13703250
Alignment:
Q  317 ctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaat 397  Q
    ||||||| ||||||||||||||| |||||| ||||||| |||| ||| |||||||| || |  ||||| ||||||| ||||    
T  13703330 ctccgttcctttttaattgtcactttttgatattttacacaaatcaagacaatcaataaatattactatttttgatacaat 13703250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 369
Target Start/End: Complemental strand, 31803173 - 31803118
Alignment:
Q  314 cacctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaat 369  Q
    |||||||||| ||||||||||||||| |||||| ||||||| || ||||| |||||    
T  31803173 cacctccgttcctttttaattgtcaccttttgatattttacacataccaagacaat 31803118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 367
Target Start/End: Complemental strand, 36481309 - 36481258
Alignment:
Q  316 cctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaaca 367  Q
    |||||||| |||||||||| ||| |||||||| |||||| ||||||||||||    
T  36481309 cctccgttcctttttaattatcatattttgactttttacacaaaccaaaaca 36481258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 434
Target Start/End: Complemental strand, 31802958 - 31802904
Alignment:
Q  380 tactacttttgatgcaataagctatacttttactataatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||  ||||||||||  |||||||||||||| ||||||    
T  31802958 tactacttttgatacaataatttatacttttatcataatgaccttattaatttaa 31802904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 457
Target Start/End: Original strand, 4843077 - 4843110
Alignment:
Q  424 tatttatttaagggttaaatatgtttttggtccc 457  Q
    ||||| ||||||||||||||||||||||||||||    
T  4843077 tatttttttaagggttaaatatgtttttggtccc 4843110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 397
Target Start/End: Original strand, 12637941 - 12638013
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaat 397  Q
    ||||||||||||||| |||| |||||||||  ||| ||| |||||||| || |  ||||||||||||| ||||    
T  12637941 ctttttaattgtcactttttaacattttacataaatcaagacaatcaataaatattactacttttgatacaat 12638013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 425 - 457
Target Start/End: Original strand, 27307692 - 27307724
Alignment:
Q  425 atttatttaagggttaaatatgtttttggtccc 457  Q
    |||||||| ||||||||||||||||||||||||    
T  27307692 atttattttagggttaaatatgtttttggtccc 27307724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 429 - 457
Target Start/End: Complemental strand, 43447462 - 43447434
Alignment:
Q  429 atttaagggttaaatatgtttttggtccc 457  Q
    |||||||||||||||||||||||||||||    
T  43447462 atttaagggttaaatatgtttttggtccc 43447434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 105; Significance: 3e-52; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 318 - 434
Target Start/End: Complemental strand, 14308643 - 14308527
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataa 417  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14308643 tccgtttctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttttactataa 14308544  T
Q  418 tgaccttatttatttaa 434  Q
    |||||||||| ||||||    
T  14308543 tgaccttattcatttaa 14308527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 10812452 - 10812333
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  10812452 acctccgttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgccataagctatacttttacta 10812353  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  10812352 taatgaccttattcatttaa 10812333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 26342833 - 26342714
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26342833 acctccgttcctttttaattgtcacgttttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttttacta 26342734  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  26342733 taatgaccttattcatttaa 26342714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 310 - 434
Target Start/End: Original strand, 30264587 - 30264711
Alignment:
Q  310 ctaccacctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttt 409  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  30264587 ctacctcctccgttcctttttaattgtcacattttgacattttacataaaccaagacaatcaacaattgatactacttttgatgcaataaactatacttt 30264686  T
Q  410 tactataatgaccttatttatttaa 434  Q
    |||||||||||||||||| ||||||    
T  30264687 tactataatgaccttattcatttaa 30264711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 3363837 - 3363718
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||||||||||| |||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3363837 acctccgttcctttttaattgtcgcattttgacattttacacaaaccaagacaatcaataattgatactacttttgatgcaataagctatacttttacta 3363738  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  3363737 taatgaccttattgatttaa 3363718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 15182991 - 15183110
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15182991 acctccgttcctttttaattgtcacattttgacattttacacaaaccaagataatcaacaattgatactacttttgatgcaataagctatatttttacta 15183090  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  15183091 taatgaccttattcatttaa 15183110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 15893570 - 15893689
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15893570 acctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttttacta 15893669  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| |||||||| ||||||    
T  15893670 taataaccttattcatttaa 15893689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 36375826 - 36375707
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  36375826 acctccgttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacctttgatgcaataagctataattttacta 36375727  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  36375726 taatgaccttattcatttaa 36375707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 325 - 434
Target Start/End: Original strand, 14295757 - 14295866
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctt 424  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14295757 ctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataaggtatacttttactataatgacctt 14295856  T
Q  425 atttatttaa 434  Q
    ||| ||||||    
T  14295857 attcatttaa 14295866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 34399455 - 34399336
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||| ||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  34399455 acctccgttcctttttaattatcacattttgacactttacacaaaccaagacaatcaacaattgatactacttttgatgcaataaactatacttttacta 34399356  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  34399355 taatgaccttattcatttaa 34399336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 41885878 - 41885759
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||     
T  41885878 acctccgttcctttttcattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctgtacttttactg 41885779  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  41885778 taatgaccttattcatttaa 41885759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 19594603 - 19594484
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||| || | ||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  19594603 acctccgttactttttaattgtcacattttgacattttacacaaacaaagataatcaacaattgatattacttttgatgcaataagctatatttttacta 19594504  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  19594503 taatgaccttattcatttaa 19594484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 44360686 - 44360567
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||| ||||| ||||||||||||||||||||| |||||||||| ||    
T  44360686 acctccgttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaataattgttactacttttgatgcaataagttatacttttatta 44360587  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  44360586 taatgaccttattcatttaa 44360567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 326 - 434
Target Start/End: Original strand, 478974 - 479082
Alignment:
Q  326 tttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctta 425  Q
    ||||||||||||||||||| ||||||||| |||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  478974 tttttaattgtcacattttaacattttacacaaaccaagataatcaataattgatactacttttgatgcaataagctatacttttactataatgacctta 479073  T
Q  426 tttatttaa 434  Q
    || ||||||    
T  479074 ttcatttaa 479082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 316 - 434
Target Start/End: Complemental strand, 37093701 - 37093584
Alignment:
Q  316 cctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactat 415  Q
    |||||||  |||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  37093701 cctccgtacctttttaattgtcacattttgacattttacacaaaccaagacaattaacaattgatactacttttgatgcaataagttatacttttactat 37093602  T
Q  416 aatgaccttatttatttaa 434  Q
    ||||| |||||| ||||||    
T  37093601 aatga-cttattcatttaa 37093584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 10264009 - 10263891
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||| |||||||| ||||||||||||||| |||||||| |||| ||| |||||||||||||||||||||||||| ||||||||||||||    
T  10264009 acctccgttccttttaaattgtcatattttgacattttacacaaaccaagacaaccaa-aattgatactacttttgatgcaataaactatacttttacta 10263911  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  10263910 taatgaccttattcatttaa 10263891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 34357431 - 34357312
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||||||||||||||||| |||||||||| |||||||| | ||||||||||| |||||| ||||||||||||||| |||| ||||||||    
T  34357431 acctccgttcctttttaattgtcacatttcgacattttacacaaaccaagataatcaacaatttatactatttttgatgcaataagttatatttttacta 34357332  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  34357331 taatgaccttattcatttaa 34357312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 25558176 - 25558295
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||||||||  || || ||||| ||||||||||||||||| |||||||| |||||||| ||||||||||||||||||| |||||||||| ||||||||||    
T  25558176 acctccgttctttcttgattgttacattttgacattttacacaaaccaagacaatcaaaaattgatactacttttgatacaataagctagacttttacta 25558275  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  25558276 taatgaccttattcatttaa 25558295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 318 - 434
Target Start/End: Complemental strand, 14288679 - 14288565
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataa 417  Q
    |||||| |||||||||||||||||||||| ||||||  ||||  || |||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  14288679 tccgttcctttttaattgtcacattttgatattttatacaaa--aagacaatcaataattgatactactttttatgcaataagctatacttttactataa 14288582  T
Q  418 tgaccttatttatttaa 434  Q
    |||||||||| ||||||    
T  14288581 tgaccttattcatttaa 14288565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 310 - 420
Target Start/End: Original strand, 1259614 - 1259724
Alignment:
Q  310 ctaccacctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttt 409  Q
    |||| |||||||||||||||||||||| ||||||||| ||||||| |||||||| | ||||||||||||||||||||||||| ||||||| ||||| |||    
T  1259614 ctactacctccgtttctttttaattgttacattttgatattttacacaaaccaagagaatcaacaattgatactacttttgacgcaataaactataattt 1259713  T
Q  410 tactataatga 420  Q
    ||| |||||||    
T  1259714 taccataatga 1259724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 315 - 405
Target Start/End: Original strand, 38072222 - 38072312
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctata 405  Q
    ||||||||| ||||||| |||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38072222 acctccgttcctttttatttgtcatattttaacattttacacaaaccaaaacaatcaacaattgatactacttttgatgcaataagctata 38072312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 325 - 434
Target Start/End: Original strand, 11560047 - 11560156
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctt 424  Q
    |||||||||| |||||||||||||||||||  ||||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||||||||| | |||    
T  11560047 ctttttaattatcacattttgacattttacataaaccaagacaatcaacaattgatattacttttgatgtaataagctgtacttttactataattatctt 11560146  T
Q  425 atttatttaa 434  Q
    ||| ||||||    
T  11560147 attcatttaa 11560156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 3376267 - 3376386
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||||||||||||||||||| |||| ||| |||||||| |||||||||||||||| ||  ||||||||||| ||||| ||    
T  3376267 acctccgttcctttttaattgtcacattttgacattttacacaaatcaagacaatcaataattgatactacttttaatataataagctatatttttatta 3376366  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| || ||||| ||||||    
T  3376367 taataacattattcatttaa 3376386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 11222306 - 11222425
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||||||||||||||||||||||||||||  ||||||| | | ||||  |||| ||||||||||||||||||||| | |||||||| ||    
T  11222306 acctccgttcctttttaattgtcacattttgacattttacataaaccaagatagtcaatgattgttactacttttgatgcaataagttgtacttttaata 11222405  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  11222406 taatgaccttattcatttaa 11222425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 320 - 434
Target Start/End: Original strand, 38186048 - 38186161
Alignment:
Q  320 cgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatg 419  Q
    |||||||||||| |||||||||||||| ||||||| ||||| || ||||||||||||||||| || |||||||| ||||| ||||| |||||||||||||    
T  38186048 cgtttcttttta-ttgtcacattttgatattttacacaaactaagacaatcaacaattgatattatttttgatgtaataaactatatttttactataatg 38186146  T
Q  420 accttatttatttaa 434  Q
    |||||||| ||||||    
T  38186147 accttattcatttaa 38186161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 4654972 - 4654853
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||||||||||| ||||||||||||||||  ||||||||| | ||||  |||| ||||||||||||||||||||| | |  ||||||||    
T  4654972 acctccgttcctttttaattgtctcattttgacattttacataaaccaaaatagtcaatgattgttactacttttgatgcaataagttgtgtttttacta 4654873  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  4654872 taatgaccttattcatttaa 4654853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 13965860 - 13965741
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||||||||||||| |||||||||||||| |||||||| |||||||| ||||| |  ||| |||||| ||||||| ||| |||||||||    
T  13965860 acctccgttcctttttaattgtcactttttgacattttacacaaaccaagacaatcaataattgtttttacatttgatccaataagttatgcttttacta 13965761  T
Q  415 taatgaccttatttatttaa 434  Q
    |||||||||| || ||||||    
T  13965760 taatgaccttgttcatttaa 13965741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 326 - 409
Target Start/End: Complemental strand, 14284325 - 14284243
Alignment:
Q  326 tttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttt 409  Q
    |||||||||||||||||||||||||| || |||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  14284325 tttttaattgtcacattttgacattt-acacaaaccaagacaatcaacaattgatactaattttgatgcaataagctatacttt 14284243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 327 - 434
Target Start/End: Original strand, 15677298 - 15677400
Alignment:
Q  327 ttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgaccttat 426  Q
    |||||||||||||||||||||||    | |||||||| |||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  15677298 ttttaattgtcacattttgacat----cacaaaccaagacaatcaaca-ttgatactacttttgatgcaataagttatacttttattataatgaccttat 15677392  T
Q  427 ttatttaa 434  Q
    | ||||||    
T  15677393 tcatttaa 15677400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 320 - 434
Target Start/End: Original strand, 28145566 - 28145681
Alignment:
Q  320 cgtttctttttaattgtcacattttgacatttt--acgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataa 417  Q
    |||| |||||||||||||||||||||| |||||  |   ||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  28145566 cgttcctttttaattgtcacattttgatattttttatataaatcaagacaatcaacaattgatactacttttgatgcaataagctatac-tttactataa 28145664  T
Q  418 tgaccttatttatttaa 434  Q
    |||| ||||| ||||||    
T  28145665 tgacattattcatttaa 28145681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 315 - 433
Target Start/End: Original strand, 35158341 - 35158459
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||||||||||||||||||| ||||||||||||||   |||||| ||| |||| || |  ||||||||||||| ||||||  ||||||||||||     
T  35158341 acctccgtttctttttaattgtcactttttgacattttacatgaaccaagacattcaataaatattactacttttgatacaataatatatacttttactg 35158440  T
Q  415 taatgaccttatttattta 433  Q
    |||| |||||||| |||||    
T  35158441 taataaccttattcattta 35158459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 325 - 434
Target Start/End: Complemental strand, 4883846 - 4883737
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctt 424  Q
    ||||||||||||||||||||||||||||||  |||| || | |  |||  |||| |||||||||||||| |||||| | |||||||||||||||||||||    
T  4883846 ctttttaattgtcacattttgacattttacataaactaatatagccaatgattgttactacttttgatgtaataagttgtacttttactataatgacctt 4883747  T
Q  425 atttatttaa 434  Q
    ||| ||||||    
T  4883746 attcatttaa 4883737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 319 - 432
Target Start/End: Complemental strand, 9707036 - 9706923
Alignment:
Q  319 ccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataat 418  Q
    ||||| ||||||||||||||| |||||||||||||| |||||||| |||||||| || |  ||||||||||||| |||||    ||||||||||||||||    
T  9707036 ccgttcctttttaattgtcactttttgacattttacacaaaccaatacaatcaataaatattactacttttgatacaatatttcatacttttactataat 9706937  T
Q  419 gaccttatttattt 432  Q
     |||||||| ||||    
T  9706936 aaccttattcattt 9706923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 326 - 434
Target Start/End: Original strand, 36404842 - 36404950
Alignment:
Q  326 tttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctta 425  Q
    ||||||||||||||||||||| |||||||   |||||| | | ||||  |||| ||||||||||||||||||||| |||| |||||||||||| ||||||    
T  36404842 tttttaattgtcacattttgatattttacatgaaccaagatagtcaatgattgttactacttttgatgcaataagttatatttttactataataacctta 36404941  T
Q  426 tttatttaa 434  Q
    || ||||||    
T  36404942 ttcatttaa 36404950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 31011708 - 31011826
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||| ||||||||||||||||  |||||||| |||||||| || || | ||||||||||| ||||||  | || ||||||||    
T  31011708 acctccgttcctttttaattgttacattttgacattttatacaaaccaagacaatcaataaatgttgctacttttgatacaataa-ttctatttttacta 31011806  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| ||||| |||||||||    
T  31011807 taataaccttgtttatttaa 31011826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 318 - 434
Target Start/End: Complemental strand, 13754205 - 13754089
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagcta-tacttttactata 416  Q
    |||||| ||||||||||||||| |||||||||||||| |||||||| |||||||  || || ||||||||||||| ||||||  || |||||||||||||    
T  13754205 tccgttcctttttaattgtcac-ttttgacattttacacaaaccaagacaatcattaaatgttactacttttgatacaataatttactacttttactata 13754107  T
Q  417 atgaccttatttatttaa 434  Q
    ||  ||||||| ||||||    
T  13754106 atagccttattcatttaa 13754089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 322 - 434
Target Start/End: Complemental strand, 9370220 - 9370108
Alignment:
Q  322 tttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgac 421  Q
    |||||||||||||||||| ||||||||||||||  ||||||| || || || || || ||||||||||||| ||||    | ||||||||||||||||||    
T  9370220 tttctttttaattgtcactttttgacattttacataaaccaagaccattaataagtgttactacttttgatacaattgtttttacttttactataatgac 9370121  T
Q  422 cttatttatttaa 434  Q
    |||||| ||||||    
T  9370120 cttattaatttaa 9370108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 13215646 - 13215527
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||| || |||||||||||||| |||||||| ||| |||| || || ||||||||||||| |||| |  | || ||||||||    
T  13215646 acctccgttcctttttaattgttactttttgacattttacacaaaccaatacactcaataaatgttactacttttgatacaatgatatgtatttttacta 13215547  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| ||| |||| ||||||    
T  13215546 taataaccctattaatttaa 13215527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 320 - 434
Target Start/End: Complemental strand, 14541579 - 14541465
Alignment:
Q  320 cgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatg 419  Q
    |||| ||||||||||||||| |||||||||||||  |||||||| |||||||| || |  ||||||||||||| | |||    ||||||||||||||||     
T  14541579 cgttcctttttaattgtcactttttgacattttatacaaaccaatacaatcaataaatattactacttttgatacgatacttcatacttttactataata 14541480  T
Q  420 accttatttatttaa 434  Q
    |||||||| ||||||    
T  14541479 accttattcatttaa 14541465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 315 - 418
Target Start/End: Original strand, 34262812 - 34262915
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||||||||||||  |||| | ||||||| |||||||| ||| |||| ||||| |||||||||||||  |||||  |||| ||||||||    
T  34262812 acctccgttcctttttaattgtcaattttttatattttacacaaaccaagacattcaataattgttactacttttgatataataatatatatttttacta 34262911  T
Q  415 taat 418  Q
    ||||    
T  34262912 taat 34262915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 334 - 434
Target Start/End: Original strand, 34884547 - 34884647
Alignment:
Q  334 tgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgaccttatttattta 433  Q
    |||||| |||||||||||||| |||||||| | |||||| || |  ||||||||||||| ||||    | |||||||||||||||||||||||| |||||    
T  34884547 tgtcactttttgacattttacacaaaccaagataatcaataaatattactacttttgatacaattgtttttacttttactataatgaccttattaattta 34884646  T
Q  434 a 434  Q
    |    
T  34884647 a 34884647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 43077545 - 43077426
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagcta-tacttttact 413  Q
    ||||||||| ||||||||||||||  |||| ||||||||| |||||||| |||||||| || || || |||||||||| ||||  | || ||||||||||    
T  43077545 acctccgttcctttttaattgtcattttttaacattttacacaaaccaagacaatcaataagtgttattacttttgatacaat-tgttattacttttact 43077447  T
Q  414 ataatgaccttatttatttaa 434  Q
    ||| || ||||||| ||||||    
T  43077446 atattggccttattaatttaa 43077426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 315 - 372
Target Start/End: Complemental strand, 8443931 - 8443874
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaa 372  Q
    ||||| ||| ||||||||||||||| |||||||||||||| |||||||| ||||||||    
T  8443931 acctctgttcctttttaattgtcactttttgacattttacacaaaccaagacaatcaa 8443874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 326 - 434
Target Start/End: Original strand, 13000912 - 13001020
Alignment:
Q  326 tttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctta 425  Q
    ||||||||||| || || ||||||||||| ||||  || |||||||| || || ||||||||||||| ||||||   ||| |||| |||||||  |||||    
T  13000912 tttttaattgttactttgtgacattttacacaaattaagacaatcaataaatgttactacttttgatacaataattaatatttttgctataatagcctta 13001011  T
Q  426 tttatttaa 434  Q
    |||||||||    
T  13001012 tttatttaa 13001020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 13849705 - 13849824
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagcta-tacttttact 413  Q
    ||||||||| ||||||||||||||  |||||| ||||||   |||||||||||||||| || |  || || ||||||| ||||  |||| ||||||||||    
T  13849705 acctccgttcctttttaattgtcattttttgatattttatataaaccaaaacaatcaataaatattattagttttgatacaat-tgctattacttttact 13849803  T
Q  414 ataatgaccttatttatttaa 434  Q
    ||||||||||| || ||||||    
T  13849804 ataatgaccttgttaatttaa 13849824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 319 - 434
Target Start/End: Original strand, 4952690 - 4952805
Alignment:
Q  319 ccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataat 418  Q
    ||||| ||||||||||||||| ||||||||||||||  |||||||||  ||||| || || |||||||||| || | ||    | ||||||||||||||     
T  4952690 ccgttcctttttaattgtcactttttgacattttacataaaccaaaatgatcaataaatgttactacttttaatactattgtttttacttttactataac 4952789  T
Q  419 gaccttatttatttaa 434  Q
    | ||||||| ||||||    
T  4952790 ggccttattaatttaa 4952805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 326 - 367
Target Start/End: Complemental strand, 36173301 - 36173260
Alignment:
Q  326 tttttaattgtcacattttgacattttacgcaaaccaaaaca 367  Q
    |||||||||||||||||||||| |||||| ||||||||||||    
T  36173301 tttttaattgtcacattttgactttttacacaaaccaaaaca 36173260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 25787579 - 25787527
Alignment:
Q  316 cctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaa 368  Q
    |||| ||| ||||||||||||||||||||||| |||||| |||||||| ||||    
T  25787579 cctctgttcctttttaattgtcacattttgactttttacacaaaccaagacaa 25787527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 397
Target Start/End: Original strand, 25186823 - 25186902
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaat 397  Q
    |||||| ||||||||  ||||| |||||||||||||| |||||||| | |||||| |  || ||||||||||||| ||||    
T  25186823 tccgttcctttttaaccgtcactttttgacattttacacaaaccaagataatcaatatatgttactacttttgatacaat 25186902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 457
Target Start/End: Complemental strand, 31901205 - 31901176
Alignment:
Q  428 tatttaagggttaaatatgtttttggtccc 457  Q
    ||||||||||||||||||||||||||||||    
T  31901205 tatttaagggttaaatatgtttttggtccc 31901176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 365
Target Start/End: Original strand, 33947420 - 33947469
Alignment:
Q  316 cctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaa 365  Q
    |||| ||||||||||||||||||||||||||  || ||| ||||||||||    
T  33947420 cctcagtttctttttaattgtcacattttgattttctacacaaaccaaaa 33947469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 434
Target Start/End: Complemental strand, 36824590 - 36824525
Alignment:
Q  369 tcaacaattgatactacttttgatgcaataagctatacttttactataatgaccttatttatttaa 434  Q
    |||| ||||| ||||| |||| |||||||||| |  ||||||||| |||||| |||||||||||||    
T  36824590 tcaataattgttactatttttaatgcaataagttgcacttttactgtaatgatcttatttatttaa 36824525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 429 - 457
Target Start/End: Original strand, 14786479 - 14786507
Alignment:
Q  429 atttaagggttaaatatgtttttggtccc 457  Q
    |||||||||||||||||||||||||||||    
T  14786479 atttaagggttaaatatgtttttggtccc 14786507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 425 - 457
Target Start/End: Complemental strand, 29387408 - 29387376
Alignment:
Q  425 atttatttaagggttaaatatgtttttggtccc 457  Q
    |||| ||||||||||||||||||||||||||||    
T  29387408 atttttttaagggttaaatatgtttttggtccc 29387376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 32854772 - 32854889
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||| |||||| |||| |||||||||  |||| || | |||||| || || || |||||||||| ||||    | |||||||||||    
T  32854772 acctccgttcctttttaactgtcactttttaacattttac--aaactaagataatcaataaatgttattacttttgatacaattgtttttacttttacta 32854869  T
Q  415 taatgaccttatttatttaa 434  Q
     |||| ||||||| ||||||    
T  32854870 caatggccttattaatttaa 32854889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 425 - 457
Target Start/End: Complemental strand, 32919137 - 32919105
Alignment:
Q  425 atttatttaagggttaaatatgtttttggtccc 457  Q
    |||| ||||||||||||||||||||||||||||    
T  32919137 atttttttaagggttaaatatgtttttggtccc 32919105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 397
Target Start/End: Original strand, 37116595 - 37116675
Alignment:
Q  317 ctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaat 397  Q
    ||||||| ||||||||||||||   | ||||||||||| |||||||| |||| ||| || || ||||| ||||||| ||||    
T  37116595 ctccgttcctttttaattgtcattctctgacattttacacaaaccaagacaaccaataaatgttactatttttgatacaat 37116675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 429 - 457
Target Start/End: Complemental strand, 39545827 - 39545799
Alignment:
Q  429 atttaagggttaaatatgtttttggtccc 457  Q
    |||||||||||||||||||||||||||||    
T  39545827 atttaagggttaaatatgtttttggtccc 39545799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 429 - 457
Target Start/End: Complemental strand, 41246127 - 41246099
Alignment:
Q  429 atttaagggttaaatatgtttttggtccc 457  Q
    |||||||||||||||||||||||||||||    
T  41246127 atttaagggttaaatatgtttttggtccc 41246099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 105; Significance: 3e-52; HSPs: 80)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 310 - 434
Target Start/End: Complemental strand, 43500764 - 43500640
Alignment:
Q  310 ctaccacctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttt 409  Q
    |||| ||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  43500764 ctactacctccgttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttt 43500665  T
Q  410 tactataatgaccttatttatttaa 434  Q
    |||||||||||||||||| ||||||    
T  43500664 tactataatgaccttattcatttaa 43500640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 315 - 432
Target Start/End: Original strand, 35531279 - 35531396
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35531279 acctccgttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttttacta 35531378  T
Q  415 taatgaccttatttattt 432  Q
    ||||||||||||| ||||    
T  35531379 taatgaccttattcattt 35531396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 13566932 - 13566813
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  13566932 acctccgttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatatttttacta 13566833  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  13566832 taatgaccttattcatttaa 13566813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 310 - 432
Target Start/End: Complemental strand, 38648715 - 38648593
Alignment:
Q  310 ctaccacctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttt 409  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  38648715 ctactacctccgtttctttttaattgtcacattttgacattttacacaaatcaagacaatcaacaattgatactatttttgatgcaataagctatacttt 38648616  T
Q  410 tactataatgaccttatttattt 432  Q
    |||||||||||||||||| ||||    
T  38648615 tactataatgaccttattcattt 38648593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 318 - 434
Target Start/End: Original strand, 8464244 - 8464360
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataa 417  Q
    |||||| ||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8464244 tccgttcctttttaattgtcacattttgacattttacataaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttttactataa 8464343  T
Q  418 tgaccttatttatttaa 434  Q
    |||||||||| ||||||    
T  8464344 tgaccttattcatttaa 8464360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 310 - 434
Target Start/End: Original strand, 12231050 - 12231174
Alignment:
Q  310 ctaccacctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttt 409  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  12231050 ctactacctccgttcctttttaattgtcacattttgacattttacataaaccaagacaatcaacaattgatactacttttgatgcaataagctgtacttt 12231149  T
Q  410 tactataatgaccttatttatttaa 434  Q
    |||||||||||||||||| ||||||    
T  12231150 tactataatgaccttattcatttaa 12231174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 326 - 434
Target Start/End: Complemental strand, 45368330 - 45368222
Alignment:
Q  326 tttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctta 425  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45368330 tttttaattgtcgcattttgacattttacacaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctta 45368231  T
Q  426 tttatttaa 434  Q
    || ||||||    
T  45368230 ttcatttaa 45368222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 1024809 - 1024690
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  1024809 acctccgttcctttttaattgtcacattttgatattttacacaaaccaaaacaatcaacaattgatactacttttgatgcaataaactatacttttacta 1024710  T
Q  415 taatgaccttatttatttaa 434  Q
    |||||| |||||| ||||||    
T  1024709 taatgatcttattcatttaa 1024690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 29831006 - 29830887
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  29831006 acctccgttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaataattgatattacttttgatgcaataagctatacttttacta 29830907  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  29830906 taatgaccttattcatttaa 29830887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 325 - 434
Target Start/End: Original strand, 19349373 - 19349482
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctt 424  Q
    |||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19349373 ctttttaattgtcacattctgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctt 19349472  T
Q  425 atttatttaa 434  Q
    ||| ||||||    
T  19349473 attcatttaa 19349482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 30686664 - 30686545
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||||||||||||| |||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  30686664 acctccgttcctttttaattgtcacgttttgatattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagttatacttttacta 30686565  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  30686564 taatgaccttattcatttaa 30686545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 35483765 - 35483884
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||||||||  ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  35483765 acctccgttcttttttaattgtcatattttgacattttacacaaaccaaaacaatcaacaattgatattatttttgatgcaataagctatacttttacta 35483864  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  35483865 taatgaccttattcatttaa 35483884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 326 - 434
Target Start/End: Original strand, 20605619 - 20605727
Alignment:
Q  326 tttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctta 425  Q
    ||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  20605619 tttttaattgtcatattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttttattataatgacctta 20605718  T
Q  426 tttatttaa 434  Q
    || ||||||    
T  20605719 ttcatttaa 20605727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 37437037 - 37437156
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||| ||| |||||||||||||| ||||||||||||||| |||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  37437037 acctctgttcctttttaattgtcatattttgacattttacacaaaccaagacaatcaataattgataccacttttgatgcaataagctatacttttacta 37437136  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  37437137 taatgaccttattcatttaa 37437156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 318 - 434
Target Start/End: Original strand, 21927685 - 21927799
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataa 417  Q
    |||||| ||||||||||||||||||  |||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21927685 tccgttcctttttaattgtcacatt--gacattttacacaaactaagacaatcaacaattgatactacttttgatgcaataagctatacttttactataa 21927782  T
Q  418 tgaccttatttatttaa 434  Q
    |||||||||| ||||||    
T  21927783 tgaccttattcatttaa 21927799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 310 - 434
Target Start/End: Complemental strand, 1429542 - 1429418
Alignment:
Q  310 ctaccacctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttt 409  Q
    |||| |||| |||| |||||||||||||||||||||| ||||||| ||||| || |||||| |||| |||||||||||||||||||||||||||||||||    
T  1429542 ctactaccttcgttcctttttaattgtcacattttgatattttacacaaactaagacaatctacaaatgatactacttttgatgcaataagctatacttt 1429443  T
Q  410 tactataatgaccttatttatttaa 434  Q
    |||||||||||||||||| ||||||    
T  1429442 tactataatgaccttattcatttaa 1429418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 1677451 - 1677332
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||| | |||||||||||||||||||||||||||||| |||| ||| |||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  1677451 acctccgctcctttttaattgtcacattttgacattttacacaaatcaagacaatcaataattgatactacttttaatgcaataagctatacttttacta 1677352  T
Q  415 taatgaccttatttatttaa 434  Q
    || |||||||||| ||||||    
T  1677351 tattgaccttattcatttaa 1677332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 325 - 434
Target Start/End: Complemental strand, 7783193 - 7783084
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctt 424  Q
    |||||||||||||||||||||||||||||  |||||||| | ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  7783193 ctttttaattgtcacattttgacattttatacaaaccaagataatcaacaattgatactacttttgatgcaattaactatacttttactataatgacctt 7783094  T
Q  425 atttatttaa 434  Q
    ||| ||||||    
T  7783093 attcatttaa 7783084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 2059796 - 2059915
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||||| || |||||||||||||||||||||||||||||| |||||||||| |||||| ||||| |||||| |||||||||||||| |||||||| ||||    
T  2059796 acctccattcctttttaattgtcacattttgacattttacacaaaccaaaataatcaataattgttactacatttgatgcaataagttatactttcacta 2059895  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  2059896 taatgaccttattcatttaa 2059915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 13508023 - 13507904
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||| |||||||||||||||||||  ||| ||| |||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  13508023 acctccgttcctttttaattatcacattttgacattttacataaatcaagacaatcaataattgatactactttggatgcaataagctatacttttacta 13507924  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||| ||||| ||||||    
T  13507923 taatgactttattaatttaa 13507904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 13515211 - 13515092
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||| |||||||||||||||||||  ||| ||| |||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  13515211 acctccgttcctttttaattatcacattttgacattttacataaatcaagacaatcaataattgatactactttggatgcaataagctatacttttacta 13515112  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||| ||||| ||||||    
T  13515111 taatgactttattaatttaa 13515092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 317 - 434
Target Start/End: Original strand, 37609290 - 37609404
Alignment:
Q  317 ctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactata 416  Q
    ||||||| ||||||||||||||||||||||||||||||  ||| ||| |||||||||||||||||||   ||||||||||||||||||||||||||||||    
T  37609290 ctccgttcctttttaattgtcacattttgacattttacataaatcaagacaatcaacaattgatact---tttgatgcaataagctatacttttactata 37609386  T
Q  417 atgaccttatttatttaa 434  Q
    ||||||||||| ||||||    
T  37609387 atgaccttattcatttaa 37609404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 50825557 - 50825675
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||||||||| |||||||||||||| |||||||||||| | |||||||| |||||||||| ||| ||||||||||||||||||||| |||||||||||||    
T  50825557 acctccgtttttttttaattgtcactttttgacatttttcacaaaccaagacaatcaaca-ttgctactacttttgatgcaataagttatacttttacta 50825655  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  50825656 taatgaccttattcatttaa 50825675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 18033810 - 18033929
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctata-cttttact 413  Q
    ||||||||| ||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||  |||||||    
T  18033810 acctccgttcctttttaattgtcacattttt-cattttacgcaaaccaagacaatcaacaattgatactcattttgatgcaataagctatattttttact 18033908  T
Q  414 ataatgaccttatttatttaa 434  Q
    |||||||||||||| ||||||    
T  18033909 ataatgaccttattcatttaa 18033929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 322 - 434
Target Start/End: Original strand, 45226568 - 45226680
Alignment:
Q  322 tttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgac 421  Q
    ||||||||||||||||||||||||||||||||  ||||  || ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  45226568 tttctttttaattgtcacattttgacattttatacaaattaagacaatcaacaattgatactacttttgatgtaataagctatacttttattataatgac 45226667  T
Q  422 cttatttatttaa 434  Q
     ||||| ||||||    
T  45226668 tttattcatttaa 45226680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 19929450 - 19929569
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||||||||||||  |||| ||||||||| |||||||| |||||||| ||||| | ||||||||||||||||||| |||||||||||||    
T  19929450 acctccgttcctttttaattgtcattttttaacattttacacaaaccaagacaatcaataattgtttctacttttgatgcaataagttatacttttacta 19929549  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  19929550 taatgaccttattaatttaa 19929569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 12124897 - 12124778
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||| |||| ||||||||||||||||||||| |||||||| |||| ||| | |||||||||||||| ||||||||||||||||||| |||||||||||||    
T  12124897 accttcgttcctttttaattgtcacattttgccattttacacaaatcaagataatcaacaattgatgctacttttgatgcaataagttatacttttacta 12124798  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| | |||||| ||||||    
T  12124797 taataatcttattcatttaa 12124778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 315 - 426
Target Start/End: Original strand, 40926737 - 40926848
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||||||||  |||||||||||||||||||||||||||||  ||||||| |||||||| ||||| ||||||||||||| ||||||| |||||||||||||    
T  40926737 acctccgttcttttttaattgtcacattttgacattttacataaaccaatacaatcaataattgttactacttttgatacaataagttatacttttacta 40926836  T
Q  415 taatgaccttat 426  Q
    ||| ||||||||    
T  40926837 taacgaccttat 40926848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 320 - 434
Target Start/End: Original strand, 39412500 - 39412614
Alignment:
Q  320 cgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatg 419  Q
    |||| ||||||||||||||| |||| ||||||||  ||||||||||||||||| ||||| | ||||||||||||||||||| |||| |||||||||||||    
T  39412500 cgttcctttttaattgtcactttttaacattttatacaaaccaaaacaatcaataattgtttctacttttgatgcaataagttatatttttactataatg 39412599  T
Q  420 accttatttatttaa 434  Q
    |||||||| ||||||    
T  39412600 accttattaatttaa 39412614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 310 - 434
Target Start/End: Original strand, 32994449 - 32994572
Alignment:
Q  310 ctaccacctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttt 409  Q
    |||| ||||||||| |||||||||||||   |||||||||||||| |||||||| |||||||| ||||  ||||||||||||||||||||| | ||||||    
T  32994449 ctactacctccgtt-ctttttaattgtctttttttgacattttacacaaaccaagacaatcaataattattactacttttgatgcaataagttgtacttt 32994547  T
Q  410 tactataatgaccttatttatttaa 434  Q
    |||||||||||||||||| ||||||    
T  32994548 tactataatgaccttattcatttaa 32994572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 317 - 433
Target Start/End: Complemental strand, 44183009 - 44182894
Alignment:
Q  317 ctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactata 416  Q
    ||||||| ||||||||||||||||||||  |||||||| |||||||| |||||||| |||||||| ||| ||||||  |||||| |||||||||||||||    
T  44183009 ctccgttcctttttaattgtcacattttagcattttacacaaaccaagacaatcaaaaattgatattac-tttgatataataagatatacttttactata 44182911  T
Q  417 atgaccttatttattta 433  Q
    |||||||||||||||||    
T  44182910 atgaccttatttattta 44182894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 318 - 434
Target Start/End: Complemental strand, 49497402 - 49497286
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataa 417  Q
    |||||| |||||||||||| ||||||||| ||||||  ||||| || ||||| ||||||||||| || ||||||||||||||| ||||||||||||||||    
T  49497402 tccgttcctttttaattgttacattttgatattttatacaaactaagacaattaacaattgatattatttttgatgcaataagttatacttttactataa 49497303  T
Q  418 tgaccttatttatttaa 434  Q
    |||||||||| ||||||    
T  49497302 tgaccttattcatttaa 49497286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 326 - 433
Target Start/End: Original strand, 31588735 - 31588842
Alignment:
Q  326 tttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctta 425  Q
    |||||||||||||||||||  |||||||| |||||||| | |||||| |||| |||||||||||||| |||||||||||||||||||||| |||||||||    
T  31588735 tttttaattgtcacattttagcattttacacaaaccaagataatcaaaaattaatactacttttgatacaataagctatacttttactatgatgacctta 31588834  T
Q  426 tttattta 433  Q
    || |||||    
T  31588835 ttcattta 31588842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 317 - 434
Target Start/End: Complemental strand, 13699425 - 13699308
Alignment:
Q  317 ctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactata 416  Q
    ||||||| ||||||||||| || |||||||||||||||  ||||||| | | ||||  |||| ||||||||||||||||||||| |||||||||||||||    
T  13699425 ctccgttcctttttaattgccatattttgacattttacataaaccaagatagtcaatgattgttactacttttgatgcaataagttatacttttactata 13699326  T
Q  417 atgaccttatttatttaa 434  Q
    ||||||||||| ||||||    
T  13699325 atgaccttattcatttaa 13699308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 322 - 434
Target Start/End: Complemental strand, 28679267 - 28679155
Alignment:
Q  322 tttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgac 421  Q
    ||||||||||||| ||||||||||||||||||   |||  || ||||| ||||||| |||||||||||||||||||||  ||||||||||||||||||||    
T  28679267 tttctttttaattatcacattttgacattttatataaattaagacaattaacaatttatactacttttgatgcaataaattatacttttactataatgac 28679168  T
Q  422 cttatttatttaa 434  Q
    |||||| ||||||    
T  28679167 cttattcatttaa 28679155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 314 - 434
Target Start/End: Complemental strand, 35255740 - 35255620
Alignment:
Q  314 cacctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttact 413  Q
    |||||| ||| ||||||||||||||| ||||||||||||||  ||||||| |||||||| ||||| |  |||||||||||||||||| ||| ||||||||    
T  35255740 cacctctgttactttttaattgtcactttttgacattttacataaaccaagacaatcaataattgtttttacttttgatgcaataagttatgcttttact 35255641  T
Q  414 ataatgaccttatttatttaa 434  Q
    ||||||||||| || ||||||    
T  35255640 ataatgaccttgttcatttaa 35255620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 31487763 - 31487882
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||| || |  | ||||||||||| ||||||  | || ||||||||    
T  31487763 acctccgttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaataaatattgctacttttgatacaataatttctatttttacta 31487862  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| |||||||||||||||    
T  31487863 taataaccttatttatttaa 31487882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 51974155 - 51974274
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||||||||||||| |||||||||||||| | |||||||||| |||| || |  ||||||||||||| ||||||  |||||||||||||    
T  51974155 acctccgttcctttttaattgtcactttttgacattttacacgaaccaaaacattcaataaatattactacttttgatacaataatgtatacttttacta 51974254  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| |||||||| ||||||    
T  51974255 taataaccttattcatttaa 51974274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 318 - 427
Target Start/End: Original strand, 49908166 - 49908278
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagc---tatacttttacta 414  Q
    |||||| |||||||||| ||||||||||||||||||  | ||| || ||||||||||||||||||||||||||||||||||| |   |||| ||||||||    
T  49908166 tccgttactttttaattatcacattttgacattttatacgaactaagacaatcaacaattgatactacttttgatgcaataaactattatatttttacta 49908265  T
Q  415 taatgaccttatt 427  Q
    |||||||||||||    
T  49908266 taatgaccttatt 49908278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 325 - 434
Target Start/End: Complemental strand, 9127912 - 9127803
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctt 424  Q
    ||||||||||||||| |||||||||||||| |||||||| ||| |||| || || ||||||||||||| ||||||  ||||||||||||||||| |||||    
T  9127912 ctttttaattgtcactttttgacattttacacaaaccaagacattcaataaatgttactacttttgatacaataatatatacttttactataataacctt 9127813  T
Q  425 atttatttaa 434  Q
    ||| ||||||    
T  9127812 attcatttaa 9127803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 326 - 434
Target Start/End: Complemental strand, 52749257 - 52749149
Alignment:
Q  326 tttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctta 425  Q
    |||||||| || | ||||||||||||||| | || ||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||| | ||||    
T  52749257 tttttaatcgttatattttgacattttacacgaatcaagacaatcaacaattgatactatttttgatgcaataaactatacttttactataataatctta 52749158  T
Q  426 tttatttaa 434  Q
    || ||||||    
T  52749157 ttcatttaa 52749149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 319 - 434
Target Start/End: Complemental strand, 48508382 - 48508267
Alignment:
Q  319 ccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataat 418  Q
    |||||||||||||||||||||||||||||||||||  |||||||||| |||||| || || |  |||||||||| ||||||  | || ||||||||||||    
T  48508382 ccgtttctttttaattgtcacattttgacattttatacaaaccaaaataatcaataaatgttgttacttttgatacaataatttttatttttactataat 48508283  T
Q  419 gaccttatttatttaa 434  Q
     |||||||||||||||    
T  48508282 aaccttatttatttaa 48508267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 325 - 433
Target Start/End: Original strand, 30702284 - 30702392
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctt 424  Q
    ||||||||||||||| |||||||||||||| |||||||| |||||||| || || ||| ||||||||| |||||   ||||||||||||||||| || ||    
T  30702284 ctttttaattgtcactttttgacattttacacaaaccaatacaatcaataaatgttaccacttttgatacaatattttatacttttactataataacatt 30702383  T
Q  425 atttattta 433  Q
    |||||||||    
T  30702384 atttattta 30702392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 326 - 434
Target Start/End: Original strand, 51972276 - 51972384
Alignment:
Q  326 tttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctta 425  Q
    ||||||||||| || |||||||||||||| ||||  || |||||||| | ||| ||||||||||||||||||||| |||||||||||||||||||  |||    
T  51972276 tttttaattgttactttttgacattttacacaaattaagacaatcaatagttgttactacttttgatgcaataagttatacttttactataatgatatta 51972375  T
Q  426 tttatttaa 434  Q
    || ||||||    
T  51972376 ttcatttaa 51972384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 10676155 - 10676036
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||| ||| |||||||||| |||||||||||||||||||  ||| ||| | | ||||  |||| || |||||||||||||||||| | |||||||||||    
T  10676155 acctctgttcctttttaattatcacattttgacattttacataaatcaatatagtcaatgattgttattacttttgatgcaataagttgtacttttacta 10676056  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| |||||||||||||||    
T  10676055 taataaccttatttatttaa 10676036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 32168296 - 32168415
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagcta-tacttttact 413  Q
    ||||||||| ||||||||||||||| |||||| ||||||| |||||||| |||||||| || || ||||||||||||| ||||  | || ||||||||||    
T  32168296 acctccgttcctttttaattgtcactttttgatattttacacaaaccaagacaatcaataaatggtactacttttgatacaat-tgttattacttttact 32168394  T
Q  414 ataatgaccttatttatttaa 434  Q
    ||||||||||| || ||||||    
T  32168395 ataatgaccttgttaatttaa 32168415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 51613664 - 51613545
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagcta-tacttttact 413  Q
    ||||||||| ||||||||||||||| |||| | ||||||| |||||||| |||||||| || |||||||||||||||| ||||  | || ||||||||||    
T  51613664 acctccgttcctttttaattgtcacttttttatattttacacaaaccaagacaatcaataaatgatactacttttgatacaat-tgttattacttttact 51613566  T
Q  414 ataatgaccttatttatttaa 434  Q
    ||||||||||| || ||||||    
T  51613565 ataatgaccttgttaatttaa 51613545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 318 - 397
Target Start/End: Complemental strand, 5598295 - 5598216
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaat 397  Q
    |||||| |||||||||||||| ||||||||||||||| |||||||| |||||||| ||||  ||||||||||||||||||    
T  5598295 tccgttcctttttaattgtcatattttgacattttacacaaaccaagacaatcaataattattactacttttgatgcaat 5598216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 32348230 - 32348112
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||||||||||||| |||||||||||||| |||||||| |||||||| || |  ||||||||||||| |||||    ||||||||||||    
T  32348230 acctccgttcctttttaattgtcac-ttttgacattttacacaaaccaatacaatcaataaatattactacttttgatacaatacttcatacttttacta 32348132  T
Q  415 taatgaccttatttatttaa 434  Q
     ||| |||||||| ||||||    
T  32348131 gaataaccttattcatttaa 32348112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 36318605 - 36318486
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||||||||||||| |||||||| ||||| |||||||| ||| |||| || ||  |||||||||||| ||||||  || || |||||||    
T  36318605 acctccgttcctttttaattgtcactttttgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataatttacacctttacta 36318506  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| ||||||||| |||||    
T  36318505 taataaccttatttgtttaa 36318486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 329 - 434
Target Start/End: Complemental strand, 43953017 - 43952922
Alignment:
Q  329 ttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgaccttattt 428  Q
    |||||||||||||||||||||||||| |||||||| |||||||          |||||||||||| |||||| ||||||||||||||||||||||||||     
T  43953017 ttaattgtcacattttgacattttacacaaaccaagacaatca----------ctacttttgatgtaataagttatacttttactataatgaccttattc 43952928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 310 - 397
Target Start/End: Original strand, 37735118 - 37735205
Alignment:
Q  310 ctaccacctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaat 397  Q
    |||| ||||||||| |||||||||| |||| |||| | |||||||||||||||| |||||||| || |||||||||||||||| ||||    
T  37735118 ctactacctccgttcctttttaattatcactttttcaaattttacgcaaaccaagacaatcaataaatgatactacttttgatacaat 37735205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 377 - 434
Target Start/End: Complemental strand, 44818645 - 44818588
Alignment:
Q  377 tgatactacttttgatgcaataagctatacttttactataatgaccttatttatttaa 434  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||    
T  44818645 tgatactacttttgatgcaataagctatagttttactgtaatgaccttattcatttaa 44818588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 325 - 397
Target Start/End: Complemental strand, 42800349 - 42800277
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaat 397  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||| || || ||||||| ||||| ||||    
T  42800349 ctttttaattgtcactttttgacattttacacaaaccaaaacaatcaataaatgttactactcttgatacaat 42800277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 311 - 399
Target Start/End: Original strand, 52649709 - 52649797
Alignment:
Q  311 taccacctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataa 399  Q
    ||||||||||||| ||||||||||||||| |||||||||||| | | || ||| |||||||| || || ||||||||||||| ||||||    
T  52649709 taccacctccgttcctttttaattgtcactttttgacatttttcactaatcaagacaatcaataaatgttactacttttgatacaataa 52649797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 35700359 - 35700478
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||||||||||||  || ||| ||||||| |||| ||| |||||||| || || |||||||||||||  |||||   ||||||||||||    
T  35700359 acctccgttcctttttaattgtcattttgtgatattttacacaaatcaagacaatcaataaatgttactacttttgatataataattgatacttttacta 35700458  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||  ||||||| ||||||    
T  35700459 taatagccttattcatttaa 35700478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 310 - 434
Target Start/End: Complemental strand, 12721698 - 12721574
Alignment:
Q  310 ctaccacctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttt 409  Q
    |||| ||||| ||| ||||||||||||||| |||| |||||||||  ||||||| ||||| || || |  ||||||||||||| ||||    | ||| ||    
T  12721698 ctactacctctgttcctttttaattgtcactttttaacattttacataaaccaagacaataaataaatattactacttttgatacaattgtttttacctt 12721599  T
Q  410 tactataatgaccttatttatttaa 434  Q
    |||||||||||||||||| ||||||    
T  12721598 tactataatgaccttattaatttaa 12721574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 325 - 457
Target Start/End: Complemental strand, 45230760 - 45230629
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctt 424  Q
    |||||||||||| |||||||||| ||||||  ||||||| ||||  || | ||  ||||||||||||| ||| ||  |||  |||| || |||| |||||    
T  45230760 ctttttaattgttacattttgactttttacataaaccaagacaacaaatacttt-tactacttttgatacaacaatttatcttttttctctaataacctt 45230662  T
Q  425 atttatttaagggttaaatatgtttttggtccc 457  Q
    | | |||||||||||||||||||||||||||||    
T  45230661 aataatttaagggttaaatatgtttttggtccc 45230629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 4100893 - 4101012
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||| | || |||||| ||||||| ||||| || |||||||| || || || |||||||||| ||||    | |||||||||||    
T  4100893 acctccgttcctttttaattattactttttgatattttacacaaactaagacaatcaataaatgttattacttttgatacaattgtttttacttttacta 4100992  T
Q  415 taatgaccttatttatttaa 434  Q
    |||||| |||||| ||||||    
T  4100993 taatgatcttattaatttaa 4101012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 397
Target Start/End: Complemental strand, 33720767 - 33720688
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaat 397  Q
    ||||||||||||||||||| ||||||||| ||||||| |||||||| |  ||||| || |||||||| ||||||| ||||    
T  33720767 tccgtttctttttaattgttacattttgatattttacacaaaccaagattatcaataaatgatactatttttgatacaat 33720688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 320 - 434
Target Start/End: Complemental strand, 10507059 - 10506945
Alignment:
Q  320 cgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatg 419  Q
    |||| ||||||||||||||  || ||| ||||||| |||| ||| |||||||| || |  ||||||||||||||||||||   |||||| |||||||||     
T  10507059 cgttcctttttaattgtcattttgtgatattttacacaaatcaagacaatcaataaatattactacttttgatgcaataattgatacttgtactataata 10506960  T
Q  420 accttatttatttaa 434  Q
     ||||||| ||||||    
T  10506959 gccttattcatttaa 10506945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 315 - 433
Target Start/End: Complemental strand, 18344579 - 18344461
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||||||||  |||||||||||||| |||| ||||||||| |||| ||| | ||| || || |  ||| ||||||||| |||||   |||||||||||||    
T  18344579 acctccgttcatttttaattgtcactttttaacattttacacaaatcaatataattaataaatattaccacttttgatacaatactttatacttttacta 18344480  T
Q  415 taatgaccttatttattta 433  Q
    |||| ||||||||| ||||    
T  18344479 taataaccttatttgttta 18344461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 320 - 434
Target Start/End: Complemental strand, 35605846 - 35605732
Alignment:
Q  320 cgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatg 419  Q
    |||| |||||||||||||||  ||||||||||||| |||||||| |||||||| || |  || || |||||||  ||||    ||||||||||||||||     
T  35605846 cgttcctttttaattgtcactatttgacattttacacaaaccaatacaatcaataaatattattaattttgatataatacttcatacttttactataata 35605747  T
Q  420 accttatttatttaa 434  Q
    |||||||| ||||||    
T  35605746 accttattcatttaa 35605732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 317 - 434
Target Start/End: Complemental strand, 43809155 - 43809038
Alignment:
Q  317 ctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactata 416  Q
    ||||||| ||||||||||||||| |||| |||||||||  |||  || |||||||| || || |||| |||||||| |||| |  | |||||||||||||    
T  43809155 ctccgttcctttttaattgtcactttttaacattttacataaattaagacaatcaataagtgttactgcttttgatacaattatttttacttttactata 43809056  T
Q  417 atgaccttatttatttaa 434  Q
    ||  ||||||| ||||||    
T  43809055 atagccttattaatttaa 43809038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 434
Target Start/End: Original strand, 31570624 - 31570740
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataa 417  Q
    |||||| |||||||| |||||| ||  | |||||||| |||||||| ||| |||| || || |||||||||||||  || ||   |||||||||||||||    
T  31570624 tccgttcctttttaagtgtcactttaaggcattttacacaaaccaatacattcaataaatgttactacttttgatagaacaatgcatacttttactataa 31570723  T
Q  418 tgaccttatttatttaa 434  Q
    | |||||||| ||||||    
T  31570724 taaccttattcatttaa 31570740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 363
Target Start/End: Original strand, 48264760 - 48264808
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaa 363  Q
    ||||||||||||||||||||||||||||||||| |||||  ||||||||    
T  48264760 acctccgtttctttttaattgtcacattttgacgttttatacaaaccaa 48264808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 17013679 - 17013560
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||| |||||  ||   ||||||||| |||||||| ||| |||| || || |||||||||||||  || ||   ||||||||||||    
T  17013679 acctccgttcctttttaagtgtcaatttaaaacattttacacaaaccaatacattcaataaatgttactacttttgatagaacaacgcatacttttacta 17013580  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| |||||||| ||||||    
T  17013579 taataaccttattcatttaa 17013560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 341 - 414
Target Start/End: Original strand, 19455410 - 19455482
Alignment:
Q  341 ttttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||||||||||||| |||||||| |||||||| || || ||||||||||||| ||||||  ||||| |||||||    
T  19455410 ttttgacattttacacaaaccaagacaatcaataa-tgttactacttttgatacaataatttatacctttacta 19455482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 325 - 434
Target Start/End: Complemental strand, 38597834 - 38597725
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctt 424  Q
    |||||||| |||||| |||||||||||||| ||||| || ||| |||| || || ||||  || | || ||||||  ||||||||||||||||| |||||    
T  38597834 ctttttaactgtcactttttgacattttacacaaactaagacactcaataaatgttactttttcttatacaataatttatacttttactataataacctt 38597735  T
Q  425 atttatttaa 434  Q
    | | ||||||    
T  38597734 agtcatttaa 38597725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 425 - 457
Target Start/End: Original strand, 8785783 - 8785815
Alignment:
Q  425 atttatttaagggttaaatatgtttttggtccc 457  Q
    |||||||||||||||||||||||||||||||||    
T  8785783 atttatttaagggttaaatatgtttttggtccc 8785815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 457
Target Start/End: Complemental strand, 10556111 - 10556078
Alignment:
Q  424 tatttatttaagggttaaatatgtttttggtccc 457  Q
    ||||||||| ||||||||||||||||||||||||    
T  10556111 tatttattttagggttaaatatgtttttggtccc 10556078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 457
Target Start/End: Original strand, 20165835 - 20165864
Alignment:
Q  428 tatttaagggttaaatatgtttttggtccc 457  Q
    ||||||||||||||||||||||||||||||    
T  20165835 tatttaagggttaaatatgtttttggtccc 20165864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 315 - 372
Target Start/End: Original strand, 42787137 - 42787194
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaa 372  Q
    ||||||||| ||||||||||||||  ||||||||||||||  ||| ||| ||||||||    
T  42787137 acctccgttcctttttaattgtcattttttgacattttacctaaatcaagacaatcaa 42787194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 457
Target Start/End: Complemental strand, 49580422 - 49580393
Alignment:
Q  428 tatttaagggttaaatatgtttttggtccc 457  Q
    ||||||||||||||||||||||||||||||    
T  49580422 tatttaagggttaaatatgtttttggtccc 49580393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 428 - 456
Target Start/End: Complemental strand, 13014763 - 13014735
Alignment:
Q  428 tatttaagggttaaatatgtttttggtcc 456  Q
    |||||||||||||||||||||||||||||    
T  13014763 tatttaagggttaaatatgtttttggtcc 13014735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 429 - 457
Target Start/End: Complemental strand, 15369504 - 15369476
Alignment:
Q  429 atttaagggttaaatatgtttttggtccc 457  Q
    |||||||||||||||||||||||||||||    
T  15369504 atttaagggttaaatatgtttttggtccc 15369476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 428 - 456
Target Start/End: Complemental strand, 20754820 - 20754792
Alignment:
Q  428 tatttaagggttaaatatgtttttggtcc 456  Q
    |||||||||||||||||||||||||||||    
T  20754820 tatttaagggttaaatatgtttttggtcc 20754792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 429 - 457
Target Start/End: Complemental strand, 31683363 - 31683335
Alignment:
Q  429 atttaagggttaaatatgtttttggtccc 457  Q
    |||||||||||||||||||||||||||||    
T  31683363 atttaagggttaaatatgtttttggtccc 31683335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 320 - 392
Target Start/End: Complemental strand, 36850885 - 36850813
Alignment:
Q  320 cgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgat 392  Q
    |||| ||||||||||||||  |||||| ||||||| |||| ||| ||| |||| || || |||||||||||||    
T  36850885 cgttcctttttaattgtcattttttgatattttacacaaatcaagacagtcaataaatgttactacttttgat 36850813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 382 - 434
Target Start/End: Original strand, 48265087 - 48265139
Alignment:
Q  382 ctacttttgatgcaataagctatacttttactataatgaccttatttatttaa 434  Q
    ||||||||||| ||||||  | || |||||||||||| |||||||||||||||    
T  48265087 ctacttttgatacaataatttctatttttactataataaccttatttatttaa 48265139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 104; Significance: 1e-51; HSPs: 78)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 35052306 - 35052187
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  35052306 acctccgttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactatttttgatgcaataagctatacttttacta 35052207  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||||||||||    
T  35052206 taatgaccttatttatttaa 35052187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 34982082 - 34981963
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  34982082 acctccgttcctttttaattgtcacattttgatattttacacaaaccaaaacaatcaacaattaatactacttttgatgcaataagctatacttttacta 34981983  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  34981982 taatgaccttattcatttaa 34981963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 38482779 - 38482898
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38482779 acctccgttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttttacta 38482878  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  38482879 taatgaccttattcatttaa 38482898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 38128534 - 38128653
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||| ||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38128534 acctccgttcctttttaattgttacattttgacattttatacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttttacta 38128633  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  38128634 taatgaccttattcatttaa 38128653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 318 - 434
Target Start/End: Complemental strand, 11994131 - 11994015
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataa 417  Q
    |||||| |||||||||||||||||||||||||||||| |||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  11994131 tccgttcctttttaattgtcacattttgacattttacacaaatcaagacaataaacaattgatactacttttgatgcaataagctatacttttactataa 11994032  T
Q  418 tgaccttatttatttaa 434  Q
    |||||||||| ||||||    
T  11994031 tgaccttattcatttaa 11994015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 39303502 - 39303622
Alignment:
Q  315 acctccgtttctttttaatt-gtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttact 413  Q
    ||||||||| |||||||||| |||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  39303502 acctccgttcctttttaatttgtcacattttgacattttacacaaatcaagacaatcaacaattgatactacttttgatgcaataagctatacttttact 39303601  T
Q  414 ataatgaccttatttatttaa 434  Q
    |||||||||||||| ||||||    
T  39303602 ataatgaccttattcatttaa 39303622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 14228309 - 14228428
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||||||||  ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  14228309 acctccgttcatttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgtcataagctatacttttacta 14228408  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  14228409 taatgaccttattcatttaa 14228428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 33935047 - 33935166
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||| |||| |||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  33935047 accttcgttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaataattgatactacttttgatgcaataagctataattttacta 33935146  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  33935147 taatgaccttattcatttaa 33935166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 317 - 434
Target Start/End: Complemental strand, 14263795 - 14263678
Alignment:
Q  317 ctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactata 416  Q
    |||||||  ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  14263795 ctccgttcttttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatattacttttgatgcaataagttatacttttactata 14263696  T
Q  417 atgaccttatttatttaa 434  Q
    ||||||||||| ||||||    
T  14263695 atgaccttattcatttaa 14263678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 318 - 434
Target Start/End: Complemental strand, 16656950 - 16656834
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataa 417  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||| |||||||||||||| |||||||||||||||||    
T  16656950 tccgtttctttttaattgtcacattttgacattttacacaaaccaagacactcaacaattgatactaattttgatgcaataaactatacttttactataa 16656851  T
Q  418 tgaccttatttatttaa 434  Q
    ||| |||||| ||||||    
T  16656850 tgaacttattcatttaa 16656834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 23430162 - 23430043
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||||| || ||||||||| |||||||||| ||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23430162 acctccattcctttttaatcgtcacattttaacattttacacaaatcaagacaatcaacaattgatactacttttgatgcaataagctatacttttacta 23430063  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  23430062 taatgaccttattcatttaa 23430043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 25703565 - 25703684
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||| | ||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  25703565 acctccgtttctttttaattgtcacattttgacattttacacaaaacaagataatcaacaattaatactactttttatgcaataagctatacttttacta 25703664  T
Q  415 taatgaccttatttatttaa 434  Q
    |||||| |||||| ||||||    
T  25703665 taatgatcttattcatttaa 25703684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 25812736 - 25812855
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||| | ||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  25812736 acctccgtttctttttaattgtcacattttgacattttacacaaaacaagataatcaacaattaatactactttttatgcaataagctatacttttacta 25812835  T
Q  415 taatgaccttatttatttaa 434  Q
    |||||| |||||| ||||||    
T  25812836 taatgaacttattcatttaa 25812855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 26062960 - 26062841
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||||| || |||||||||||||||||||||||||||||| |||| ||| | ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  26062960 acctccattcctttttaattgtcacattttgacattttacacaaatcaagataatcaacaattgatactacttttgatgcaataagctatatttttacta 26062861  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  26062860 taatgaccttattcatttaa 26062841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 325 - 434
Target Start/End: Complemental strand, 40228538 - 40228429
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctt 424  Q
    ||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  40228538 ctttttaattgtcacattttgacgttttacacaaaccaagacaatcaacaattgatactatttttgatgcaataagctgtacttttactataatgacctt 40228439  T
Q  425 atttatttaa 434  Q
    ||| ||||||    
T  40228438 attcatttaa 40228429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 322 - 434
Target Start/End: Original strand, 1202438 - 1202550
Alignment:
Q  322 tttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgac 421  Q
    ||||||||||||||||||||||| ||||||||| |||| ||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  1202438 tttctttttaattgtcacattttaacattttacacaaatcaagacaatcaacaattgatactatttttgatgcaataagttatacttttactataatgac 1202537  T
Q  422 cttatttatttaa 434  Q
    |||||| ||||||    
T  1202538 cttattcatttaa 1202550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 325 - 434
Target Start/End: Complemental strand, 4057531 - 4057422
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctt 424  Q
    |||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||| |||    
T  4057531 ctttttaattgtcacattttgacattttacacaaaccaagacaattaacaattgatactactttttatgccataagctatacttttactataatgatctt 4057432  T
Q  425 atttatttaa 434  Q
    ||| ||||||    
T  4057431 attaatttaa 4057422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 325 - 434
Target Start/End: Complemental strand, 34047094 - 34046985
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctt 424  Q
    |||||||||||||||||||||||||||||| |||||||| |  ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  34047094 ctttttaattgtcacattttgacattttacacaaaccaagaatatcaacaattgatactatttttgatgcaataaactatacttttactataatgacctt 34046995  T
Q  425 atttatttaa 434  Q
    ||| ||||||    
T  34046994 attcatttaa 34046985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 317 - 434
Target Start/End: Original strand, 45281367 - 45281484
Alignment:
Q  317 ctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactata 416  Q
    ||||||| | |||||||||||||||||| ||||||||| |||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  45281367 ctccgttcccttttaattgtcacattttaacattttacacaaaccaagataatcaacaattgatactacttttgatgcaataaactatacttttactata 45281466  T
Q  417 atgaccttatttatttaa 434  Q
    || |||||||| ||||||    
T  45281467 atcaccttattcatttaa 45281484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 23848543 - 23848662
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||| ||| ||||||||||||||||||||||||||| || |||||||| |||||||| |||||||||||||||||||||||||| ||||| ||||| ||    
T  23848543 acctctgttcctttttaattgtcacattttgacatttgacacaaaccaagacaatcaataattgatactacttttgatgcaataaactatatttttatta 23848642  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  23848643 taatgaccttattcatttaa 23848662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 15596597 - 15596478
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||| | |||||| ||||| || ||||||| |||||||||| |||||||||||||    
T  15596597 acctccgttcctttttaattgtcacattttgacattttacacaaaccaagataatcaataattgttattactttttatgcaataagttatacttttacta 15596498  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| |||||||| ||||||    
T  15596497 taataaccttattcatttaa 15596478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 325 - 434
Target Start/End: Complemental strand, 9954892 - 9954783
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctt 424  Q
    |||||||||||||| ||||| |||||||||  ||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||    
T  9954892 ctttttaattgtcatattttaacattttacataaaccaagacaatcaacaattgatattacttttgatgcaataagttatacttttaccataatgacctt 9954793  T
Q  425 atttatttaa 434  Q
    ||| ||||||    
T  9954792 attcatttaa 9954783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 318 - 434
Target Start/End: Complemental strand, 1245562 - 1245446
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataa 417  Q
    |||||| ||||||||||||||| ||||||||||||||  ||| ||| |||||||| ||||| ||||||||||||| ||||||| ||||||||||||||||    
T  1245562 tccgttcctttttaattgtcactttttgacattttacataaatcaagacaatcaataattgttactacttttgattcaataagttatacttttactataa 1245463  T
Q  418 tgaccttatttatttaa 434  Q
    |||||||||| ||||||    
T  1245462 tgaccttattcatttaa 1245446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 41308149 - 41308029
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttga-tgcaataagctatacttttact 413  Q
    |||||||||||||||||||||||| |||||||||||||||  | ||||| ||||| || ||||| |||||||||||| ||||||||| ||||||||||||    
T  41308149 acctccgtttctttttaattgtcatattttgacattttacatataccaagacaattaataattgttactacttttgattgcaataagttatacttttact 41308050  T
Q  414 ataatgaccttatttatttaa 434  Q
    |||||||||||||| ||||||    
T  41308049 ataatgaccttattcatttaa 41308029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 8453223 - 8453342
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||| || | |||||| ||||| ||||||||||||||||||||  |||||||||| ||    
T  8453223 acctccgttcctttttaattgtcacattttgacattttacacaaactaagataatcaataattgttactacttttgatgcaataaattatacttttatta 8453322  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||| ||||| ||||||    
T  8453323 taatgacattattcatttaa 8453342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 18291716 - 18291597
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||||||||||||||||||||||||||||  ||| ||| | | ||||  |||| ||||||||||||||||||||| |||||||||||||    
T  18291716 acctccgttcctttttaattgtcacattttgacattttacaaaaatcaagatagtcaatgattgttactacttttgatgcaataagttatacttttacta 18291617  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  18291616 taatgaccttattcatttaa 18291597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 325 - 427
Target Start/End: Original strand, 43641986 - 43642088
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctt 424  Q
    ||||||||||||||| |||||||||||||| ||||| || |||||||| ||||| ||||||||||||||||||||  |||||||||||||||||||||||    
T  43641986 ctttttaattgtcactttttgacattttacacaaactaagacaatcaataattgttactacttttgatgcaataaattatacttttactataatgacctt 43642085  T
Q  425 att 427  Q
    |||    
T  43642086 att 43642088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 317 - 417
Target Start/End: Complemental strand, 13328221 - 13328121
Alignment:
Q  317 ctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactata 416  Q
    ||||||| |||||||||||||||||||||||||||||| ||||| || |||||||| |||||||||||||||| || ||||||| |||||||||||||||    
T  13328221 ctccgttcctttttaattgtcacattttgacattttacacaaactaagacaatcaaaaattgatactacttttaatacaataagttatacttttactata 13328122  T
Q  417 a 417  Q
    |    
T  13328121 a 13328121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 311 - 434
Target Start/End: Complemental strand, 43553296 - 43553173
Alignment:
Q  311 taccacctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatactttt 410  Q
    ||||||||||||||||||||||||||| | || |||||||||||||||||||| |||||||| || || ||||||||||||| ||||||   ||||||||    
T  43553296 taccacctccgtttctttttaattgtcgctttgtgacattttacgcaaaccaagacaatcaataaatgttactacttttgatacaataattgatactttt 43553197  T
Q  411 actataatgaccttatttatttaa 434  Q
    ||||||||  ||||||| ||||||    
T  43553196 actataatatccttattcatttaa 43553173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 318 - 434
Target Start/End: Complemental strand, 10180620 - 10180504
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataa 417  Q
    ||||||||||||||||||||| |||||||||||||||  ||| ||| | | ||||  |||| ||||||||||||||||||||| | ||||||||||||||    
T  10180620 tccgtttctttttaattgtcatattttgacattttacataaatcaagatagtcaatgattgttactacttttgatgcaataagttgtacttttactataa 10180521  T
Q  418 tgaccttatttatttaa 434  Q
    |||||||||| ||||||    
T  10180520 tgaccttattcatttaa 10180504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 326 - 434
Target Start/End: Original strand, 32010082 - 32010190
Alignment:
Q  326 tttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctta 425  Q
    |||||||||||||| |||| ||||||| | |||||||| |||||||| ||||| ||||||||||||||||||||  |||||||||||||||||||||||     
T  32010082 tttttaattgtcactttttaacatttttcacaaaccaagacaatcaataattgctactacttttgatgcaataatttatacttttactataatgaccttg 32010181  T
Q  426 tttatttaa 434  Q
    || ||||||    
T  32010182 ttcatttaa 32010190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 2456102 - 2456221
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||| ||||||||||| ||||||||||||||||||||  ||| ||| | | ||||  |||| ||||||||||||||||||||| | |||||||||||    
T  2456102 acctccgattctttttaatcgtcacattttgacattttacataaatcaatatagtcaatgattgttactacttttgatgcaataagttgtacttttacta 2456201  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  2456202 taatgaccttattcatttaa 2456221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 12342601 - 12342720
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||| ||| |||||||||||||| |||||||||||||||  ||||||| | | ||||  |||| ||||||||||||||||||||| | |||||||||||    
T  12342601 acctctgttcctttttaattgtcatattttgacattttacataaaccaagatagtcaatgattgttactacttttgatgcaataagttgtacttttacta 12342700  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  12342701 taatgaccttattcatttaa 12342720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 17074569 - 17074688
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||||||||| ||||||||| |||||||| |||||||| || |  | ||||||||||||||||||  | || ||||||||    
T  17074569 acctccgttcctttttaattgtcacattttaacattttacacaaaccaagacaatcaataaatattgctacttttgatgcaataatttttatttttacta 17074668  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| |||||||||||||||    
T  17074669 taataaccttatttatttaa 17074688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 17573701 - 17573582
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||||||||| ||||||||| |||||||| |||||||| || |  | ||||||||||||||||||  | || ||||||||    
T  17573701 acctccgttcctttttaattgtcacattttaacattttacacaaaccaagacaatcaataaatattgctacttttgatgcaataatttttatttttacta 17573602  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| |||||||||||||||    
T  17573601 taataaccttatttatttaa 17573582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 18842782 - 18842663
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||||||||||||||||||| |||| ||| | |||||| || || ||||||||||||| ||||||  | || ||||||||    
T  18842782 acctccgttcctttttaattgtcacattttgacattttacacaaatcaagataatcaataaatgttactacttttgatacaataatttttatttttacta 18842683  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| |||||||||||||||    
T  18842682 taataaccttatttatttaa 18842663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 317 - 434
Target Start/End: Original strand, 21651735 - 21651852
Alignment:
Q  317 ctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactata 416  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||| | |  |||  || | ||||||||||||||||||||  | |||||||||||||    
T  21651735 ctccgtttctttttaattgtcacattttgacattttacataaaccaagatagccaatgatcgttactacttttgatgcaataacttgtacttttactata 21651834  T
Q  417 atgaccttatttatttaa 434  Q
    ||||||||||| ||||||    
T  21651835 atgaccttattcatttaa 21651852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 2888455 - 2888574
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||||||||| ||||||||| |||||||| |||||||| || || | ||||||||||| ||||||  | || |||||||     
T  2888455 acctccgttcctttttaattgtcacattttaacattttacacaaaccaagacaatcaataaatgttgctacttttgatacaataatttctatttttactt 2888554  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| |||||||||||||||    
T  2888555 taataaccttatttatttaa 2888574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 317 - 434
Target Start/End: Complemental strand, 36058483 - 36058366
Alignment:
Q  317 ctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactata 416  Q
    ||||||| ||||||||||||| ||||||||||||||||  |||  |||| | ||||  |||| ||||||||||||||||||||| | |||||||||||||    
T  36058483 ctccgttcctttttaattgtcgcattttgacattttacataaattaaaatagtcaatgattgttactacttttgatgcaataagttgtacttttactata 36058384  T
Q  417 atgaccttatttatttaa 434  Q
    |||| |||||| ||||||    
T  36058383 atgatcttattcatttaa 36058366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 8554003 - 8554122
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||| |||| ||||| |||||||||||||||||||||||| |||| ||| |||||||| || || | ||||||||||| ||||||  | || ||||||||    
T  8554003 accttcgttccttttcaattgtcacattttgacattttacacaaatcaagacaatcaataaatgttgctacttttgatacaataatttttatttttacta 8554102  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| |||||||||||||||    
T  8554103 taataaccttatttatttaa 8554122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 315 - 418
Target Start/End: Original strand, 14061136 - 14061239
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||||||||||||| |||| ||||||||| |||||||| |||||||| || |  ||||||||||||| ||||||  |||||||||||||    
T  14061136 acctccgttcctttttaattgtcactttttaacattttacacaaaccaagacaatcaataaatattactacttttgatacaataatttatacttttacta 14061235  T
Q  415 taat 418  Q
    ||||    
T  14061236 taat 14061239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 23855810 - 23855691
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||||||| ||||  ||||||||||||||  ||||||| |||||||| || |  ||||||||||||| ||||| |  ||||||||||||    
T  23855810 acctccgttcctttttaatcgtcattttttgacattttacataaaccaatacaatcaataaatattactacttttgatacaatacgtcatacttttacta 23855711  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| |||||||||||||||    
T  23855710 taataaccttatttatttaa 23855691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 12248757 - 12248876
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||||||||| ||  |||||||||||||| | |||||| ||| |||| || |  ||||||||||||| ||||||  |||||||||||||    
T  12248757 acctccgttcctttttaattgacagtttttgacattttacacgaaccaagacattcaataaatattactacttttgatacaataatatatacttttacta 12248856  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| |||||||| ||||||    
T  12248857 taataaccttattcatttaa 12248876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 26740124 - 26740243
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||| |||| ||||||||||||||| |||||||||||||| |||||||| |||||||| || || ||||||||||||| ||||    | |||||||||||    
T  26740124 accttcgttcctttttaattgtcactttttgacattttacacaaaccaagacaatcaataagtgttactacttttgatacaattgtttttacttttacta 26740223  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||  ||||||| ||||||    
T  26740224 taatagccttattaatttaa 26740243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 315 - 427
Target Start/End: Complemental strand, 17313395 - 17313283
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| | |||||||||| |||||||||||| ||||  |||| || | | ||||  |||| || |||||||||||||||||| | |||||||||||    
T  17313395 acctccgttcccttttaattgttacattttgacatcttacataaacgaagatagtcaattattgttattacttttgatgcaataagttctacttttacta 17313296  T
Q  415 taatgaccttatt 427  Q
    |||||||||||||    
T  17313295 taatgaccttatt 17313283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 326 - 434
Target Start/End: Original strand, 27518711 - 27518819
Alignment:
Q  326 tttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctta 425  Q
    |||||||| || |||||||||||||||||  ||||||| | | ||||  |||| |||||||||| |||||||||| | |||| ||||||||||||| |||    
T  27518711 tttttaatagttacattttgacattttacataaaccaatatagtcaatgattgttactactttttatgcaataagttgtactgttactataatgacttta 27518810  T
Q  426 tttatttaa 434  Q
    |||||||||    
T  27518811 tttatttaa 27518819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 346 - 434
Target Start/End: Original strand, 40603869 - 40603957
Alignment:
Q  346 acattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgaccttatttatttaa 434  Q
    ||||||||  |||| ||| |||||||||||||||||||| |||||||| ||||| ||| ||||||||||| ||||||||||| ||||||    
T  40603869 acattttatacaaatcaagacaatcaacaattgatactatttttgatgtaataaactaaacttttactatgatgaccttattcatttaa 40603957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 367 - 434
Target Start/End: Complemental strand, 3513558 - 3513491
Alignment:
Q  367 aatcaacaattgatactacttttgatgcaataagctatacttttactataatgaccttatttatttaa 434  Q
    |||||| |||||||| |||||||||| ||||||||||||| |||||||||||||||||||| ||||||    
T  3513558 aatcaaaaattgatattacttttgatacaataagctatacatttactataatgaccttattcatttaa 3513491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 318 - 433
Target Start/End: Complemental strand, 8672744 - 8672629
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataa 417  Q
    |||||| ||||||||||||||  |||||| ||||||| |||||||||| |||||| || || || || ||||||| ||||    | ||||||||||||||    
T  8672744 tccgttcctttttaattgtcattttttgatattttacacaaaccaaaataatcaataaatgttattatttttgatacaattgtttttacttttactataa 8672645  T
Q  418 tgaccttatttattta 433  Q
    ||||||||||||||||    
T  8672644 tgaccttatttattta 8672629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 371 - 434
Target Start/End: Original strand, 9808017 - 9808080
Alignment:
Q  371 aacaattgatactacttttgatgcaataagctatacttttactataatgaccttatttatttaa 434  Q
    ||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  9808017 aacaattaatactacttttgatgcaataagttatacttttattataatgaccttattcatttaa 9808080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 39615440 - 39615558
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||| |||||||||||||||||||||||||| |||||||  ||||||| ||||| || || || |  |||||||||| ||||||  | || ||||||||    
T  39615440 acctctgtttctttttaattgtcacattttgatattttacataaaccaagacaattaataa-tgttgttacttttgatacaataatttttatttttacta 39615538  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| |||||||||||||||    
T  39615539 taataaccttatttatttaa 39615558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 7605912 - 7606005
Alignment:
Q  341 ttttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgaccttatttatttaa 434  Q
    |||| ||||||||| |||| ||| |||||||| |||   || ||||||| |||||||||| ||||||||||||||||||| |||||||||||||    
T  7605912 ttttaacattttacacaaatcaagacaatcaataatcattattacttttaatgcaataagttatacttttactataatgatcttatttatttaa 7606005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 325 - 434
Target Start/End: Complemental strand, 33314787 - 33314678
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctt 424  Q
    ||||||||||||| ||||||||||||||||  ||||||| | | ||||  |||| ||||| |||| |||||||||| | | |||||||||||||||| ||    
T  33314787 ctttttaattgtcgcattttgacattttacataaaccaatatagtcaatgattgttactattttttatgcaataagttgtccttttactataatgacttt 33314688  T
Q  425 atttatttaa 434  Q
    ||| ||||||    
T  33314687 attcatttaa 33314678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 317 - 413
Target Start/End: Original strand, 11707443 - 11707539
Alignment:
Q  317 ctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttact 413  Q
    |||||||||||||||||||||| ||||| |||||||||  |||  || |||||||| ||||  |||||||||||||| | |||| ||||||||||||    
T  11707443 ctccgtttctttttaattgtcatatttttacattttacataaattaagacaatcaataattattactacttttgatgtattaagttatacttttact 11707539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 326 - 434
Target Start/End: Original strand, 14511428 - 14511536
Alignment:
Q  326 tttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctta 425  Q
    |||||||||||||| |||||| ||||||| |||||||| ||||| || || || ||||| ||||||| ||||    | ||||||||||||||||||||||    
T  14511428 tttttaattgtcactttttgaaattttacacaaaccaagacaattaataaatgttactatttttgatacaattgtttttacttttactataatgacctta 14511527  T
Q  426 tttatttaa 434  Q
    || ||||||    
T  14511528 ttaatttaa 14511536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 36111930 - 36112047
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||| ||||||  ||||||||||||| |||||||| ||| |||| || || ||||  || | || |||||| ||||||||||||||    
T  36111930 acctccgttcctttttaactgtcac--tttgacattttacacaaaccaagacactcaataaatgttactttttcttatacaataatctatacttttacta 36112027  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| |||||| | ||||||    
T  36112028 taataaccttagtcatttaa 36112047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 27911659 - 27911778
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||  |||||||| ||| |  |||||||||||||| |||| ||| |||||||| || || ||||||||||||| ||||    | |||||||||||    
T  27911659 acctccgtacctttttaagtgttattttttgacattttacacaaatcaagacaatcaataaatgttactacttttgatacaattgtttttacttttacta 27911758  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||| ||||||| ||||||    
T  27911759 taatggccttattaatttaa 27911778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 27958078 - 27958197
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||  |||||||| ||| |  |||||||||||||| |||| ||| |||||||| || || ||||||||||||| ||||    | |||||||||||    
T  27958078 acctccgtacctttttaagtgttattttttgacattttacacaaatcaagacaatcaataaatgttactacttttgatacaattgtttttacttttacta 27958177  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||| ||||||| ||||||    
T  27958178 taatggccttattaatttaa 27958197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 317 - 434
Target Start/End: Complemental strand, 3720931 - 3720814
Alignment:
Q  317 ctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactata 416  Q
    ||||||| ||||||||||||||| |||| ||||||||| ||||| ||||||||||| || |   ||| |||||||| ||||    | |||||||||||||    
T  3720931 ctccgttcctttttaattgtcactttttaacattttacacaaactaaaacaatcaataagtttgactgcttttgatacaattgcttttacttttactata 3720832  T
Q  417 atgaccttatttatttaa 434  Q
    ||  ||||||| ||||||    
T  3720831 atagccttattaatttaa 3720814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 399
Target Start/End: Complemental strand, 31964820 - 31964738
Alignment:
Q  317 ctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataa 399  Q
    ||||||| || |||||||||||  || ||||||||||| |||||||| |||||||| || || ||||| ||||||| ||||||    
T  31964820 ctccgttcctctttaattgtcattttatgacattttacacaaaccaagacaatcaataaatgttactatttttgatacaataa 31964738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 434
Target Start/End: Complemental strand, 42352989 - 42352872
Alignment:
Q  316 cctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactat 415  Q
    |||| ||||||||||||||||||  ||||||| |||||| ||||||||||||| |||  | |  ||||||||||||||||| ||  |||  ||||  |||    
T  42352989 cctctgtttctttttaattgtcatgttttgactttttacacaaaccaaaacaa-caaatacttttactacttttgatgcaacaatttatctttttcatat 42352891  T
Q  416 aatgaccttatttatttaa 434  Q
    ||| |||||||| ||||||    
T  42352890 aataaccttattcatttaa 42352872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 434
Target Start/End: Original strand, 15623664 - 15623717
Alignment:
Q  381 actacttttgatgcaataagctatacttttactataatgaccttatttatttaa 434  Q
    |||| |||||||| |||||| |||||||||||||||||||| ||||| ||||||    
T  15623664 actatttttgatgtaataagttatacttttactataatgacattattcatttaa 15623717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 434
Target Start/End: Original strand, 15647452 - 15647505
Alignment:
Q  381 actacttttgatgcaataagctatacttttactataatgaccttatttatttaa 434  Q
    |||| |||||||| |||||| |||||||||||||||||||| ||||| ||||||    
T  15647452 actatttttgatgtaataagttatacttttactataatgacattattcatttaa 15647505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 326 - 391
Target Start/End: Original strand, 29091083 - 29091148
Alignment:
Q  326 tttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttga 391  Q
    |||||||||||||| |||||||||||||| |||| ||| |||||||| || |  ||||||||||||    
T  29091083 tttttaattgtcactttttgacattttacacaaatcaagacaatcaataaatattactacttttga 29091148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 372
Target Start/End: Complemental strand, 13174181 - 13174125
Alignment:
Q  316 cctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaa 372  Q
    |||||||| |||||||| |||||| |||||||||||||| |||||||| ||| ||||    
T  13174181 cctccgttcctttttaactgtcactttttgacattttacacaaaccaagacactcaa 13174125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 434
Target Start/End: Complemental strand, 17718721 - 17718637
Alignment:
Q  350 tttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgaccttatttatttaa 434  Q
    ||||| |||||||| |||||||| ||||| ||||| ||||||| ||||    | |||||||||||||||| ||||||| ||||||    
T  17718721 tttacacaaaccaagacaatcaataattgttactatttttgatacaattgtttttacttttactataatggccttattaatttaa 17718637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 363
Target Start/End: Complemental strand, 45317901 - 45317857
Alignment:
Q  319 ccgtttctttttaattgtcacattttgacattttacgcaaaccaa 363  Q
    ||||| ||||||||||||||||||||||| |||||| ||||||||    
T  45317901 ccgttcctttttaattgtcacattttgactttttacacaaaccaa 45317857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 418
Target Start/End: Complemental strand, 19972532 - 19972429
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||||||  ||||| |||||||||||||| |||||||| ||| |||| || || |||   || | || ||||||  |||||||||||||    
T  19972532 acctccgttcctttttaacggtcactttttgacattttacacaaaccaagacactcaataaatgttacattttcttatacaataatttatacttttacta 19972433  T
Q  415 taat 418  Q
    ||||    
T  19972432 taat 19972429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 418
Target Start/End: Original strand, 21020301 - 21020404
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||||||  ||||| |||||||||||||| |||||||| ||| |||| || || |||   || | || ||||||  |||||||||||||    
T  21020301 acctccgttcctttttaacggtcactttttgacattttacacaaaccaagacactcaataaatgttacattttcttatacaataatttatacttttacta 21020400  T
Q  415 taat 418  Q
    ||||    
T  21020401 taat 21020404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 363
Target Start/End: Complemental strand, 6661196 - 6661158
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaa 363  Q
    ||||||||||||||||||||||| |||||| ||||||||    
T  6661196 ctttttaattgtcacattttgactttttacacaaaccaa 6661158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 363
Target Start/End: Complemental strand, 6741598 - 6741560
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaa 363  Q
    ||||||||||||||||||||||| |||||| ||||||||    
T  6741598 ctttttaattgtcacattttgactttttacacaaaccaa 6741560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 423 - 457
Target Start/End: Original strand, 10409466 - 10409500
Alignment:
Q  423 ttatttatttaagggttaaatatgtttttggtccc 457  Q
    |||||||||| ||||||||||||||||||||||||    
T  10409466 ttatttattttagggttaaatatgtttttggtccc 10409500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 347
Target Start/End: Original strand, 3305288 - 3305325
Alignment:
Q  310 ctaccacctccgtttctttttaattgtcacattttgac 347  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  3305288 ctaccccctccgtttcttttcaattgtcacattttgac 3305325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 434
Target Start/End: Original strand, 41643479 - 41643596
Alignment:
Q  317 ctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactata 416  Q
    |||||||  ||||||||||| |  |||||||||||||| |||||||| | | |||| || || |||||||||||||  |||||  ||| ||||| | |||    
T  41643479 ctccgttcatttttaattgtaattttttgacattttacacaaaccaataaagtcaataaatgttactacttttgatataataaattatccttttccaata 41643578  T
Q  417 atgaccttatttatttaa 434  Q
    || |||| ||| ||||||    
T  41643579 ataacctcattcatttaa 41643596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 457
Target Start/End: Complemental strand, 42148951 - 42148918
Alignment:
Q  424 tatttatttaagggttaaatatgtttttggtccc 457  Q
    ||||| ||||||||||||||||||||||||||||    
T  42148951 tatttttttaagggttaaatatgtttttggtccc 42148918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 363
Target Start/End: Complemental strand, 40608287 - 40608243
Alignment:
Q  319 ccgtttctttttaattgtcacattttgacattttacgcaaaccaa 363  Q
    ||||| ||||||||||||||||||||||| || ||| ||||||||    
T  40608287 ccgttgctttttaattgtcacattttgactttctacacaaaccaa 40608243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 429 - 457
Target Start/End: Original strand, 42309438 - 42309466
Alignment:
Q  429 atttaagggttaaatatgtttttggtccc 457  Q
    |||||||||||||||||||||||||||||    
T  42309438 atttaagggttaaatatgtttttggtccc 42309466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 429 - 457
Target Start/End: Complemental strand, 45434990 - 45434962
Alignment:
Q  429 atttaagggttaaatatgtttttggtccc 457  Q
    |||||||||||||||||||||||||||||    
T  45434990 atttaagggttaaatatgtttttggtccc 45434962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 97; Significance: 2e-47; HSPs: 3)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 318 - 434
Target Start/End: Complemental strand, 49396 - 49280
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataa 417  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  49396 tccgttcctttttaattgtcacattttgacattttacgcaaaccaagacaatcaacaattgatactacttttgatgcaataaactatacttttattataa 49297  T
Q  418 tgaccttatttatttaa 434  Q
    |||||||||| ||||||    
T  49296 tgaccttattcatttaa 49280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 326 - 378
Target Start/End: Complemental strand, 89412 - 89360
Alignment:
Q  326 tttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattg 378  Q
    ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||    
T  89412 tttttaattgtcacattttgacattttacacaaatcaagacaatcaacaattg 89360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 153 - 226
Target Start/End: Original strand, 158214 - 158287
Alignment:
Q  153 ttttggtgataaggacaagaatccttaggcttcaatgcaattagttacaatttgtagctggttaattttatttt 226  Q
    |||||||||||  ||||||| |||||| | ||||||| |||||||||| ||||||||||||||  |||||||||    
T  158214 ttttggtgatagagacaagactccttaagtttcaatgtaattagttaccatttgtagctggtttcttttatttt 158287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 97; Significance: 2e-47; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 318 - 434
Target Start/End: Original strand, 53745278 - 53745394
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataa 417  Q
    |||||| |||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53745278 tccgttcctttttaattgtcacattttgacattttacacaaaccaagataatcaacaattgatactacttttgatgcaataagctatacttttactataa 53745377  T
Q  418 tgaccttatttatttaa 434  Q
    |||||||||| ||||||    
T  53745378 tgaccttattcatttaa 53745394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 27992493 - 27992374
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||| ||| |||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27992493 acctctgttcctttttaattgtcacattttgacattttacacaacccaatacaatcaacaattgatactacttttgatgcaataagctatacttttacta 27992394  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  27992393 taatgaccttattcatttaa 27992374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 34266433 - 34266552
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  34266433 acctccgttcctttttaatcgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagttatacttttacta 34266532  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  34266533 taatgaccttattcatttaa 34266552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 43554642 - 43554523
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  43554642 acctccgttactttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatcatacttttgatgcaataagctatacttttacta 43554543  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  43554542 taatgaccttattcatttaa 43554523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 310 - 434
Target Start/End: Complemental strand, 29651926 - 29651802
Alignment:
Q  310 ctaccacctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttt 409  Q
    |||| |||||||||  ||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29651926 ctactacctccgttcttttttaattgtcacatttttacattttacacaaaccaaaacaatcaacagttgatactacttttgatgcaataagctatacttt 29651827  T
Q  410 tactataatgaccttatttatttaa 434  Q
    |||||||||||| ||||| ||||||    
T  29651826 tactataatgactttattcatttaa 29651802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 790803 - 790684
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||  ||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  790803 acctccgttcctttttaatgatcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttttacta 790704  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  790703 taatgaccttattcatttaa 790684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 325 - 434
Target Start/End: Original strand, 54898089 - 54898198
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctt 424  Q
    ||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  54898089 ctttttaattgtcacattttgacattttacataaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttttattataatgacctt 54898188  T
Q  425 atttatttaa 434  Q
    ||| ||||||    
T  54898189 attcatttaa 54898198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 310 - 434
Target Start/End: Original strand, 45101346 - 45101470
Alignment:
Q  310 ctaccacctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttt 409  Q
    |||| ||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||  |||| ||||||||||||||||||||||||||||    
T  45101346 ctactacctccgttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacagctgatgctacttttgatgcaataagctatacttt 45101445  T
Q  410 tactataatgaccttatttatttaa 434  Q
    | |||||||||||||||| ||||||    
T  45101446 tcctataatgaccttattcatttaa 45101470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 318 - 434
Target Start/End: Complemental strand, 46973673 - 46973557
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataa 417  Q
    ||||||||||||||||||| ||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  46973673 tccgtttctttttaattgttacattttgatattttacacaaaccaaagcaatcaacaattgatactacttttgatgcaataagttatacttttattataa 46973574  T
Q  418 tgaccttatttatttaa 434  Q
    |||||||||| ||||||    
T  46973573 tgaccttattcatttaa 46973557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 318 - 418
Target Start/End: Original strand, 47069853 - 47069953
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataa 417  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  47069853 tccgtttctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagttatacttttactataa 47069952  T
Q  418 t 418  Q
    |    
T  47069953 t 47069953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 319 - 434
Target Start/End: Complemental strand, 6902527 - 6902412
Alignment:
Q  319 ccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataat 418  Q
    |||||||||||||| ||||||||||||| ||||||| |||||||| || |||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  6902527 ccgtttctttttaactgtcacattttgatattttacacaaaccaagaccatcaacaattgatactacatttgatgcaataagctataattttactataat 6902428  T
Q  419 gaccttatttatttaa 434  Q
    ||||||||||||||||    
T  6902427 gaccttatttatttaa 6902412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 319 - 434
Target Start/End: Complemental strand, 19550495 - 19550380
Alignment:
Q  319 ccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataat 418  Q
    ||||| |||||||||||||||||||||||||||||| ||||| || ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  19550495 ccgttcctttttaattgtcacattttgacattttacacaaactaagacaatcaacaattgatattacttttgatgcaataagctatatttttactataat 19550396  T
Q  419 gaccttatttatttaa 434  Q
    ||||||||| ||||||    
T  19550395 gaccttattcatttaa 19550380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 54106516 - 54106397
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||| |||||||||||||||||  ||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  54106516 acctccgttcctttttaattgttacattttgacattttacataaaccaagacaatcaacaattgatattacttttgatgcaataaactatacttttacta 54106417  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  54106416 taatgaccttattcatttaa 54106397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 315 - 423
Target Start/End: Complemental strand, 29698244 - 29698136
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||  || |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  29698244 acctccgttcctttttaattgtcacattttgacattttacacaaattaagacaatcaacaattgatactatttttgatgcaataagctatacttttacta 29698145  T
Q  415 taatgacct 423  Q
    |||||||||    
T  29698144 taatgacct 29698136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 317 - 434
Target Start/End: Complemental strand, 52663693 - 52663576
Alignment:
Q  317 ctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactata 416  Q
    |||||||  ||||||||||||| |||||||||||| || |||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  52663693 ctccgttcatttttaattgtcatattttgacatttcacacaaaccaagacaatcaataattgatactacttttgatgcaataagctatacttttgctata 52663594  T
Q  417 atgaccttatttatttaa 434  Q
    ||||||||||| ||||||    
T  52663593 atgaccttattcatttaa 52663576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 326 - 434
Target Start/End: Complemental strand, 24981532 - 24981424
Alignment:
Q  326 tttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctta 425  Q
    ||||||||||||||||||||||||||| | ||||| || | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  24981532 tttttaattgtcacattttgacattttgcacaaactaagataatcaacaattgatactacttttgatgcaataaactatacttttactataatgacctta 24981433  T
Q  426 tttatttaa 434  Q
    || ||||||    
T  24981432 ttcatttaa 24981424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 29803901 - 29803782
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||||||||||| ||||||| | |||||| |||||||||||||||||||| | ||||||||||||| |||||||||||||    
T  29803901 acctccgttcctttttaattgtcacattttgatattttacacgaaccaagacaatcaacaattgatactattattgatgcaataagttatacttttacta 29803802  T
Q  415 taatgaccttatttatttaa 434  Q
    |||||| |||||| ||||||    
T  29803801 taatgatcttattcatttaa 29803782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 315 - 432
Target Start/End: Original strand, 51219086 - 51219206
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaac---aattgatactacttttgatgcaataagctatactttta 411  Q
    ||||||||| ||||||||||||||||| |||||||||||| |||||||| |||||||||   ||||||||||||||||||||||||||| ||||||||||    
T  51219086 acctccgttcctttttaattgtcacatattgacattttacacaaaccaagacaatcaacaacaattgatactacttttgatgcaataagttatactttta 51219185  T
Q  412 ctataatgaccttatttattt 432  Q
    ||||||||| |||||| ||||    
T  51219186 ctataatgatcttattcattt 51219206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 330 - 434
Target Start/End: Original strand, 51697571 - 51697676
Alignment:
Q  330 taattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatac-ttttactataatgaccttattt 428  Q
    ||||||||| ||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||     
T  51697571 taattgtcatattttgacattttacacaaaccaagacaatcaacaattgatactatttttgatgcaataagctatactttttactataatgaccttattc 51697670  T
Q  429 atttaa 434  Q
    ||||||    
T  51697671 atttaa 51697676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 310 - 434
Target Start/End: Original strand, 42671878 - 42672002
Alignment:
Q  310 ctaccacctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttt 409  Q
    |||| |||||||||  ||||||||||||||||||||||||||||   |||| || ||||||||||||||||| ||||||||||||||||| |||||||||    
T  42671878 ctactacctccgttcttttttaattgtcacattttgacattttatataaactaagacaatcaacaattgatattacttttgatgcaataaactatacttt 42671977  T
Q  410 tactataatgaccttatttatttaa 434  Q
    ||||||||| |||||||| ||||||    
T  42671978 tactataataaccttattcatttaa 42672002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 43945632 - 43945513
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||||| |||||||||||||||||||||   ||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||     
T  43945632 acctccgttcctttttagttgtcacattttgacattttatataaaccaagacaatcaacaattgatactatttttgatgcaataaactatacttttactg 43945533  T
Q  415 taatgaccttatttatttaa 434  Q
    |||||| |||||| ||||||    
T  43945532 taatgatcttattcatttaa 43945513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 325 - 434
Target Start/End: Complemental strand, 32980883 - 32980774
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctt 424  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||| ||||| || |||||||||||||||||| |||||||||| |||| |||||||    
T  32980883 ctttttaattgtcacattttgacattttacacaaaccaagacaatcaataattgttaatacttttgatgcaataagttatacttttattatactgacctt 32980784  T
Q  425 atttatttaa 434  Q
    ||| ||||||    
T  32980783 attcatttaa 32980774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 317 - 434
Target Start/End: Complemental strand, 35315383 - 35315266
Alignment:
Q  317 ctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactata 416  Q
    ||||||| ||||||||||||||  |||||||||||||| |||| ||| |||||||||||||| ||||||||||||||||||||| |||||||||| ||||    
T  35315383 ctccgttcctttttaattgtcattttttgacattttacacaaatcaagacaatcaacaattgttactacttttgatgcaataagttatacttttattata 35315284  T
Q  417 atgaccttatttatttaa 434  Q
    |||||||| || ||||||    
T  35315283 atgaccttgttcatttaa 35315266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 310 - 434
Target Start/End: Original strand, 27483776 - 27483900
Alignment:
Q  310 ctaccacctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttt 409  Q
    |||| ||||| ||| |||||||||||||| ||||| ||||||||  |||| ||  |||||||||||||||||||||||||||||||||||| |||| |||    
T  27483776 ctactacctctgttcctttttaattgtcatattttaacattttatacaaatcaggacaatcaacaattgatactacttttgatgcaataagttatatttt 27483875  T
Q  410 tactataatgaccttatttatttaa 434  Q
    |||||||||||||||||| ||||||    
T  27483876 tactataatgaccttattcatttaa 27483900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 13158432 - 13158551
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||| | |||||||||||||||  ||||||| ||||| || |||||||||||||||||||  |||||| |||||||||||||    
T  13158432 acctccgttcctttttaattgttatattttgacattttacataaaccaagacaataaaaaattgatactacttttgatataataagttatacttttacta 13158531  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  13158532 taatgaccttattcatttaa 13158551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 33491132 - 33491251
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||||||||||||||||||||||||||||  |||| || | | ||||  |||| ||||||||||||||||||||| |||||||||||||    
T  33491132 acctccgttcctttttaattgtcacattttgacattttacataaactaagatagtcaatgattgttactacttttgatgcaataagttatacttttacta 33491231  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| |||||||||||||||    
T  33491232 taataaccttatttatttaa 33491251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 51244877 - 51244758
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||||||||||| |||| | ||||||| ||||||| |||||||| |||||||||||||||||||| |||||||||||||||| ||| ||||| ||    
T  51244877 acctccgtttctttttacttgtaatattttgatattttacacaaaccaagacaatcaacaattgatactagttttgatgcaataagccatatttttatta 51244778  T
Q  415 taatgaccttatttatttaa 434  Q
    |||||| |||||| ||||||    
T  51244777 taatgatcttattcatttaa 51244758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 317 - 434
Target Start/End: Original strand, 52627233 - 52627350
Alignment:
Q  317 ctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactata 416  Q
    ||||||| |||||||||||||||||||||||||||| | || ||||| | ||| ||| ||||||| |||||||||||||||||| |||||||||||||||    
T  52627233 ctccgttcctttttaattgtcacattttgacattttcctcataccaagataattaacgattgatattacttttgatgcaataagttatacttttactata 52627332  T
Q  417 atgaccttatttatttaa 434  Q
    ||||| ||||| ||||||    
T  52627333 atgactttattcatttaa 52627350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 323 - 434
Target Start/End: Original strand, 39866850 - 39866961
Alignment:
Q  323 ttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacc 422  Q
    ||||||||||||||||| |||||||||||||| |||||||| |||||||| ||||| |  |||||||||||||||||| ||| |||||||||||||||||    
T  39866850 ttctttttaattgtcactttttgacattttacacaaaccaagacaatcaataattgtttttacttttgatgcaataagttatgcttttactataatgacc 39866949  T
Q  423 ttatttatttaa 434  Q
    || || ||||||    
T  39866950 ttgttaatttaa 39866961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 43775383 - 43775502
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||| |||||||||||||||||||  ||||||| | | ||||  |||| ||||||||||||||||||||| | |||||||||||    
T  43775383 acctccgttcctttttaattttcacattttgacattttacataaaccaagatagtcaatgattgttactacttttgatgcaataagttgtacttttacta 43775482  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  43775483 taatgaccttattcatttaa 43775502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 346 - 434
Target Start/End: Original strand, 40139858 - 40139946
Alignment:
Q  346 acattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgaccttatttatttaa 434  Q
    ||||||||| |||||||| |||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  40139858 acattttacacaaaccaagacaatcaataattgttactacttttgatgcaataagttatacttttactataatgaccttattcatttaa 40139946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 326 - 407
Target Start/End: Complemental strand, 41169000 - 41168916
Alignment:
Q  326 tttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatac---tacttttgatgcaataagctatact 407  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||   |||||||||||||||||||||||||    
T  41169000 tttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactactacttttgatgcaataagctatact 41168916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 49123775 - 49123657
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctat--acttttac 412  Q
    ||||||||| ||||||||| |||||||||||||||||||| |||| ||| | |||   ||||||||||||| ||||||||||||| ||||  ||||||||    
T  49123775 acctccgttcctttttaatagtcacattttgacattttacacaaatcaagataat---caattgatactacatttgatgcaataaactatacacttttac 49123679  T
Q  413 tataatgaccttatttatttaa 434  Q
    ||||||||||||||| ||||||    
T  49123678 tataatgaccttattcatttaa 49123657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 322 - 434
Target Start/End: Original strand, 54911302 - 54911413
Alignment:
Q  322 tttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgac 421  Q
    ||||||||||||||||||||||| | |||||||  | |  || |||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  54911302 tttctttttaattgtcacattttaaaattttacatatat-aagacaatcaataattgttactacttttgatgcaataagttatacttttactataatgac 54911400  T
Q  422 cttatttatttaa 434  Q
    |||||| ||||||    
T  54911401 cttattcatttaa 54911413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 20848717 - 20848836
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||| ||||||||||||||||||||| |||||||||| |||||| || || ||||||||||||| ||||    | |||||||||||    
T  20848717 acctccgttcctttttaactgtcacattttgacattttacacaaaccaaaataatcaataaatgttactacttttgatacaattgtttttacttttacta 20848816  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||| ||||||| ||||||    
T  20848817 taatggccttattaatttaa 20848836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 41425882 - 41425763
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||||||||| ||||||||| |||||||| |||||||| || || | ||||||||||| ||||||  | || |||||||     
T  41425882 acctccgttcctttttaattgtcacattttaacattttacacaaaccaagacaatcaataaatgttgctacttttgatacaataatttctatttttactt 41425783  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| |||||||||||||||    
T  41425782 taataaccttatttatttaa 41425763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 45145381 - 45145262
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||||| || ||||||||||||||  |||||| ||||||| |||||||| |||||||| ||||  || |||||||| ||||||||| |||||||||||||    
T  45145381 acctcctttcctttttaattgtcattttttgatattttacacaaaccaagacaatcaataattattattacttttgctgcaataagttatacttttacta 45145282  T
Q  415 taatgaccttatttatttaa 434  Q
    |||||| |||||| ||||||    
T  45145281 taatgatcttattcatttaa 45145262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 320 - 434
Target Start/End: Original strand, 33074276 - 33074390
Alignment:
Q  320 cgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatg 419  Q
    |||| ||||||| |||||||||||||||||||||| |||||||| |||||||| || || | ||||||||||| ||||||  | || ||||||||||||     
T  33074276 cgttcctttttatttgtcacattttgacattttacacaaaccaagacaatcaataaatgctgctacttttgatacaataatttttatttttactataata 33074375  T
Q  420 accttatttatttaa 434  Q
    |||||||||||||||    
T  33074376 accttatttatttaa 33074390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 326 - 434
Target Start/End: Complemental strand, 17102996 - 17102888
Alignment:
Q  326 tttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctta 425  Q
    ||||||||||| |  |||||||||||||| ||||  |||||||| || ||||| ||||||||||||||||||||  |||||||||| |||||||||||||    
T  17102996 tttttaattgttattttttgacattttacacaaattaaaacaattaataattgttactacttttgatgcaataatttatacttttattataatgacctta 17102897  T
Q  426 tttatttaa 434  Q
    || ||||||    
T  17102896 ttcatttaa 17102888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 326 - 434
Target Start/End: Original strand, 29458207 - 29458315
Alignment:
Q  326 tttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctta 425  Q
    |||||||| |||||||||||||||||||| |||||||| |||||||| || || | ||||||||||| ||||||  | || |||||||||||| ||||||    
T  29458207 tttttaatcgtcacattttgacattttacacaaaccaagacaatcaataaatgttgctacttttgatacaataatttctatttttactataataacctta 29458306  T
Q  426 tttatttaa 434  Q
    |||||||||    
T  29458307 tttatttaa 29458315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 41926933 - 41926812
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactact---tttgatgcaataagctatactttta 411  Q
    ||||| ||| ||||||||||||||| |||| ||||||||| |||||||| |||||||| ||||| |||||||   |||||||||||||| ||||||||||    
T  41926933 acctctgttcctttttaattgtcacttttt-acattttacacaaaccaagacaatcaataattgttactactacttttgatgcaataagttatactttta 41926835  T
Q  412 ctataatgaccttatttatttaa 434  Q
    |||| |||| |||||| ||||||    
T  41926834 ctatgatgatcttattcatttaa 41926812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 3643189 - 3643308
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||||| || |||||||| |||||| |||||||||||||| |||| ||| |||||||| || || ||||||||||||| |||| |  | |||||||||||    
T  3643189 acctccattcctttttaagtgtcactttttgacattttacacaaatcaatacaatcaagaaatgttactacttttgatacaattatttttacttttacta 3643288  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  3643289 taatgaccttattaatttaa 3643308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 318 - 434
Target Start/End: Complemental strand, 36234614 - 36234501
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataa 417  Q
    |||||| |||||||||||||||||||||| ||||||| ||||  || |||||||| || |||||||   |||||| |||||||||||||||||||| |||    
T  36234614 tccgttcctttttaattgtcacattttgatattttacacaaattaagacaatcaaaaagtgatact---tttgatacaataagctatacttttactgtaa 36234518  T
Q  418 tgaccttatttatttaa 434  Q
    ||| |||||| ||||||    
T  36234517 tgatcttattcatttaa 36234501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 310 - 434
Target Start/End: Original strand, 33874534 - 33874658
Alignment:
Q  310 ctaccacctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctata-ctt 408  Q
    |||| ||||||||| ||||||||||||||  |||||||||||||| ||||||||||||||||| || || ||||||||||||| ||||  | | || |||    
T  33874534 ctactacctccgttcctttttaattgtcattttttgacattttacacaaaccaaaacaatcaataaatgttactacttttgatacaat-tgttttacctt 33874632  T
Q  409 ttactataatgaccttatttatttaa 434  Q
    ||||||||||| ||||||| ||||||    
T  33874633 ttactataatggccttattaatttaa 33874658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 326 - 434
Target Start/End: Complemental strand, 28885919 - 28885812
Alignment:
Q  326 tttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctta 425  Q
    ||||||||||||||||||| |||||||||  ||||||| | | ||||  |||| ||||||||||||||||||||| | ||| ||||||||||||||||||    
T  28885919 tttttaattgtcacattttaacattttacataaaccaagatagtcaattattgttactacttttgatgcaataagttgtac-tttactataatgacctta 28885821  T
Q  426 tttatttaa 434  Q
    || ||||||    
T  28885820 ttcatttaa 28885812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 40318921 - 40319040
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||||||||  ||||||||||||||||||| ||||||||| |||||||| | |||||| || || | ||||||||||| ||||||  | || |||||||     
T  40318921 acctccgttcatttttaattgtcacattttaacattttacacaaaccaagataatcaataaatgttgctacttttgatacaataatttctatttttactt 40319020  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| |||||||||||||||    
T  40319021 taataaccttatttatttaa 40319040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 318 - 385
Target Start/End: Original strand, 45513314 - 45513381
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactac 385  Q
    |||||| |||||||||||||| ||||||| ||||||| |||| |||||||||||||||||||||||||    
T  45513314 tccgttcctttttaattgtcatattttgatattttacacaaatcaaaacaatcaacaattgatactac 45513381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 315 - 388
Target Start/End: Complemental strand, 7329077 - 7329004
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttt 388  Q
    |||||| ||||||||||||||||||||||| ||||||||| ||||| || |||||||| ||||| |||||||||    
T  7329077 acctccatttctttttaattgtcacattttaacattttacacaaactaagacaatcaataattgttactacttt 7329004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 325 - 434
Target Start/End: Original strand, 32853363 - 32853472
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctt 424  Q
    |||||||||||| || |||||||||||||| ||||| || |||||||| || || ||||||||||||| ||||    | |||||||||||||| ||||||    
T  32853363 ctttttaattgtaactttttgacattttacacaaactaagacaatcaataaatgttactacttttgatacaattgtttttacttttactataacgacctt 32853462  T
Q  425 atttatttaa 434  Q
    ||| ||||||    
T  32853463 attaatttaa 32853472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 326 - 434
Target Start/End: Original strand, 25983667 - 25983774
Alignment:
Q  326 tttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctta 425  Q
    |||||||||||||  |||||||||||||| ||||  || | |||| ||||||| ||||| |||||||| |||||| |||||||||||||||||||| ||     
T  25983667 tttttaattgtcagtttttgacattttacacaaattaagataatctacaattgttactatttttgatg-aataagttatacttttactataatgactttg 25983765  T
Q  426 tttatttaa 434  Q
    || ||||||    
T  25983766 ttcatttaa 25983774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 41351187 - 41351306
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||||||||||||| || ||| |||||||  ||| ||| ||| ||||  | || |||||||||||||  |||||  |||||||||||||    
T  41351187 acctccgttcctttttaattgtcactttctgatattttacataaatcaagacattcaattaatgttactacttttgatataataatatatacttttacta 41351286  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| |||||||| ||||||    
T  41351287 taataaccttattcatttaa 41351306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 380
Target Start/End: Complemental strand, 13168255 - 13168193
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgat 380  Q
    |||||| |||||||||||||||||||| ||||||||  |||||||| ||||||||||||||||    
T  13168255 tccgttcctttttaattgtcacatttttacattttatacaaaccaagacaatcaacaattgat 13168193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 380 - 434
Target Start/End: Original strand, 45513673 - 45513727
Alignment:
Q  380 tactacttttgatgcaataagctatacttttactataatgaccttatttatttaa 434  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||    
T  45513673 tactacttttgatgcaataaactatatttttactataatgaccttattcatttaa 45513727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 325 - 434
Target Start/End: Original strand, 24067 - 24176
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctt 424  Q
    |||||||| |||||| || |||||||||||  ||||||| ||| | || || |  ||||||||||||| ||||||  ||||||||||||||||| |||||    
T  24067 ctttttaagtgtcactttgtgacattttacataaaccaagacatttaataaatattactacttttgatacaataatatatacttttactataataacctt 24166  T
Q  425 atttatttaa 434  Q
    ||| ||||||    
T  24167 attcatttaa 24176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 325 - 434
Target Start/End: Original strand, 3376307 - 3376416
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctt 424  Q
    |||||||  |||||||||||||||||||||  |||| || | ||||||  |||| ||||| |||| ||| |||||| | || ||||||||||||||||||    
T  3376307 ctttttatctgtcacattttgacattttacataaactaagataatcaatgattgttactattttttatgtaataagttgtatttttactataatgacctt 3376406  T
Q  425 atttatttaa 434  Q
    ||| ||||||    
T  3376407 attcatttaa 3376416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 317 - 434
Target Start/End: Original strand, 47104150 - 47104267
Alignment:
Q  317 ctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactata 416  Q
    ||||||| ||||||||||| ||| ||||||||||||||  ||| |||||||||||| || || ||||| |||||||  |||    | |||||||||||||    
T  47104150 ctccgttcctttttaattgccactttttgacattttacataaatcaaaacaatcaataaatgttactatttttgatataattgattttacttttactata 47104249  T
Q  417 atgaccttatttatttaa 434  Q
    ||||| ||||| ||||||    
T  47104250 atgactttattaatttaa 47104267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 325 - 418
Target Start/End: Complemental strand, 48214298 - 48214205
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataat 418  Q
    ||||||||||||||| |||||||||||||| || ||||| |||||||| || |  ||||||||||||| |||||    ||||||||||||||||    
T  48214298 ctttttaattgtcactttttgacattttacacacaccaatacaatcaataaatattactacttttgatacaatacttcatacttttactataat 48214205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 325 - 434
Target Start/End: Complemental strand, 51065126 - 51065017
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctt 424  Q
    |||||||||| |||| |||| ||||||||| |||||||| |||||||| || || ||||||||||||| ||||    | |||||| |||||||||| |||    
T  51065126 ctttttaattatcactttttaacattttacacaaaccaagacaatcaataaatgttactacttttgatacaattgtttttactttcactataatgatctt 51065027  T
Q  425 atttatttaa 434  Q
    ||| ||||||    
T  51065026 attaatttaa 51065017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 315 - 399
Target Start/End: Original strand, 2858570 - 2858654
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataa 399  Q
    ||||||||| |||||||||||||||||||| ||||||||| || ||||| |||||||| ||  | | ||||||||||| ||||||    
T  2858570 acctccgttcctttttaattgtcacattttaacattttacacagaccaagacaatcaataaaggttgctacttttgatacaataa 2858654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 326 - 434
Target Start/End: Complemental strand, 45055429 - 45055321
Alignment:
Q  326 tttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctta 425  Q
    |||||||||||||  |||| | |||||||  ||| ||| |||||||| ||||  |  |||||||||| ||||||| |||||||||||||||||||| |||    
T  45055429 tttttaattgtcaatttttaatattttacataaatcaagacaatcaataattatttttacttttgatacaataagttatacttttactataatgacatta 45055330  T
Q  426 tttatttaa 434  Q
    || ||||||    
T  45055329 ttaatttaa 45055321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 318 - 434
Target Start/End: Complemental strand, 52175969 - 52175854
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataa 417  Q
    |||||| |||||||||| | ||||||||||||||||| |||||||| ||||| ||||| || || |||||||||| ||||    | |||||||||| |||    
T  52175969 tccgttcctttttaattatgacattttgacattttacacaaaccaagacaattaacaa-tgttattacttttgatacaattgtttttacttttactgtaa 52175871  T
Q  418 tgaccttatttatttaa 434  Q
    |||| ||||| ||||||    
T  52175870 tgactttattaatttaa 52175854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 363
Target Start/End: Original strand, 35458497 - 35458545
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaa 363  Q
    |||||||||||||||||||||||||||||| || |||||| ||||||||    
T  35458497 acctccgtttctttttaattgtcacattttaactttttacacaaaccaa 35458545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 383 - 434
Target Start/End: Complemental strand, 7328640 - 7328589
Alignment:
Q  383 tacttttgatgcaataagctatacttttactataatgaccttatttatttaa 434  Q
    |||||||||||||||||| |||||||| | ||||||||||||||| ||||||    
T  7328640 tacttttgatgcaataagttatactttcattataatgaccttattcatttaa 7328589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 315 - 400
Target Start/End: Complemental strand, 20105426 - 20105349
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataag 400  Q
    ||||||||| |||||||||||||||||||| ||||       ||| ||| |||||||||||||||||| |||||||||||||||||    
T  20105426 acctccgttcctttttaattgtcacatttt-acat-------aaatcaagacaatcaacaattgataccacttttgatgcaataag 20105349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 432
Target Start/End: Complemental strand, 48152236 - 48152121
Alignment:
Q  317 ctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactata 416  Q
    ||||||| ||||||||||||||  |||| | ||||||| |||| ||| |||||||| || |  || |||||||||| |||||    ||||||||||||||    
T  48152236 ctccgttcctttttaattgtcatttttttatattttacacaaatcaatacaatcaataaatattattacttttgatacaatacttcatacttttactata 48152137  T
Q  417 atgaccttatttattt 432  Q
    || |||||||| ||||    
T  48152136 ataaccttattcattt 48152121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 325 - 434
Target Start/End: Complemental strand, 11473645 - 11473536
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctt 424  Q
    ||||||||||||| | |||||||||||||| ||||| || ||| |||| || || ||||  || | || ||||||  ||||||||||||||||| |||||    
T  11473645 ctttttaattgtcgctttttgacattttacacaaactaagacattcaataaatgttactttttcttatacaataatttatacttttactataataacctt 11473546  T
Q  425 atttatttaa 434  Q
    | | ||||||    
T  11473545 agtcatttaa 11473536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 318 - 363
Target Start/End: Complemental strand, 28226666 - 28226621
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaa 363  Q
    |||||| ||||||||||||||||||||||| |||||| ||||||||    
T  28226666 tccgttcctttttaattgtcacattttgactttttacacaaaccaa 28226621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 318 - 434
Target Start/End: Original strand, 42515170 - 42515284
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataa 417  Q
    |||||| |||||||||||| || |||| ||||||||| |||||||| |||||||| ||  | ||||| ||||||| ||||    | ||||||||||||||    
T  42515170 tccgttcctttttaattgtaactttttaacattttacacaaaccaagacaatcaataa--gttactatttttgatacaattgtttttacttttactataa 42515267  T
Q  418 tgaccttatttatttaa 434  Q
    |  ||||||| ||||||    
T  42515268 tcgccttattaatttaa 42515284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 374 - 434
Target Start/End: Original strand, 44544079 - 44544139
Alignment:
Q  374 aattgatactacttttgatgcaataagctatacttttactataatgaccttatttatttaa 434  Q
    ||||| || |||||||||| ||||||| ||||||||||||||||| ||||| || ||||||    
T  44544079 aattgttaatacttttgatacaataagttatacttttactataataacctttttcatttaa 44544139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 50092198 - 50092079
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||| |||| | |||||||||||||| |||||||| ||| | || || || || |  || | || ||||||  |||||||||||||    
T  50092198 acctccgttcctttttaactgtcgctttttgacattttacacaaaccaagacactaaataaatgttattttttcttatacaataatttatacttttacta 50092099  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| |||||| | ||||||    
T  50092098 taataaccttagtcatttaa 50092079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 434
Target Start/End: Original strand, 36370862 - 36370940
Alignment:
Q  356 caaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgaccttatttatttaa 434  Q
    |||||||| |||||||| || || | ||||||||||| ||||||  | || ||||||| |||| |||||||||||||||    
T  36370862 caaaccaagacaatcaataaatgttgctacttttgatacaataatttctatttttactttaataaccttatttatttaa 36370940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 372
Target Start/End: Original strand, 44543727 - 44543781
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaa 372  Q
    |||||| ||||||||||||||  |||||||||||||| |||||||| | ||||||    
T  44543727 tccgttactttttaattgtcattttttgacattttacacaaaccaagataatcaa 44543781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 32853967 - 32854060
Alignment:
Q  341 ttttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgaccttatttatttaa 434  Q
    |||||||||||||| |||||||| ||| |||| || || ||||  || | || ||||||  ||||||||||||||||| |||||| | ||||||    
T  32853967 ttttgacattttacacaaaccaagacactcaataaatgttactttttcttatacaataatgtatacttttactataataaccttagtcatttaa 32854060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 96; Significance: 7e-47; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 8407 - 8288
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  8407 acctccgttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagttatacttttacta 8308  T
Q  415 taatgaccttatttatttaa 434  Q
    |||||| |||||| ||||||    
T  8307 taatgatcttattcatttaa 8288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 2e-44; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 8382079 - 8381960
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  8382079 acctccgttcctttttaattatcacattttgacattttacacaaaccaagacaatcaacaattgatattacttttgatgcaataagatatacttttacta 8381980  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  8381979 taatgaccttattcatttaa 8381960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 33099825 - 33099944
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||||||||  ||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  33099825 acctccgttcttttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagttatacttttacta 33099924  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  33099925 taatgaccttattcatttaa 33099944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 317 - 434
Target Start/End: Original strand, 29497526 - 29497643
Alignment:
Q  317 ctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactata 416  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||  ||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  29497526 ctccgtttctttttaattatcacattttgacattttacacaaaccaggacaatcaacaattgatactactttttatgccataagctatacttttactata 29497625  T
Q  417 atgaccttatttatttaa 434  Q
    ||||||||||| ||||||    
T  29497626 atgaccttattcatttaa 29497643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 325 - 434
Target Start/End: Complemental strand, 41891513 - 41891404
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctt 424  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  41891513 ctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactaattttgatgcaataagttatacttttactataatgacctt 41891414  T
Q  425 atttatttaa 434  Q
    ||| ||||||    
T  41891413 attcatttaa 41891404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 7312870 - 7312751
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||| |||| |||| ||||||||||||||||| ||||||| |||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  7312870 accttcgttcctttgtaattgtcacattttgatattttacacaaatcaagacaatcaacaattgatactacttttgatgcaataagttatacttttacta 7312771  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||||||||||    
T  7312770 taatgaccttatttatttaa 7312751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 31430812 - 31430693
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||| ||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  31430812 acctctgttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactatttttcatgcaataagctatacttttacta 31430713  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| |||||||| ||||||    
T  31430712 taataaccttattcatttaa 31430693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 32966039 - 32966158
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||||||||| ||||||||| ||||  || |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  32966039 acctccgttcctttttaattgtcacattttaacattttacacaaattaagacaatcaacaattgataccacttttgatgcaataagctatacttttacta 32966138  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  32966139 taatgaccttattcatttaa 32966158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 29722295 - 29722413
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||| ||| |||| ||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  29722295 acctctgttcctttataattgtcacattttaacattttacgcaaaccaagacaatcaacaatcgatactacttttgatgcaataagttatacttttacta 29722394  T
Q  415 taatgaccttatttatttaa 434  Q
    |||||| |||||||||||||    
T  29722395 taatga-cttatttatttaa 29722413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 325 - 434
Target Start/End: Complemental strand, 18470550 - 18470441
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctt 424  Q
    ||||||||||||| |||||| | |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  18470550 ctttttaattgtcgcattttaatattttacgcaaaccaagacaatcaacaattgatactactttttatgcaataagctatacttttactataacgacctt 18470451  T
Q  425 atttatttaa 434  Q
    ||| ||||||    
T  18470450 attcatttaa 18470441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 310 - 434
Target Start/End: Original strand, 12838063 - 12838187
Alignment:
Q  310 ctaccacctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttt 409  Q
    |||| ||||||| | |||||||||||||||||||||| ||||||| |||||||| |||||||| |||||||| |||||||||| ||||||||||||| ||    
T  12838063 ctactacctccgatcctttttaattgtcacattttgatattttacacaaaccaagacaatcaaaaattgatattacttttgatacaataagctatacctt 12838162  T
Q  410 tactataatgaccttatttatttaa 434  Q
    ||||||||| |||||||||||||||    
T  12838163 tactataataaccttatttatttaa 12838187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 8265202 - 8265083
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||||||||  ||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||| ||||||||||||||| ||||| ||||||||    
T  8265202 acctccgttcttttttaattgtcacattttgaaattttacacaaaccaagacaatcaacaattgatactccttttgatgcaataaactatatttttacta 8265103  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| |||||||| ||||||    
T  8265102 taataaccttattaatttaa 8265083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 32528318 - 32528437
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||||||||  ||||||||||||| ||||||||||||||  |||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  32528318 acctccgttcatttttaattgtcatattttgacattttatacaaatcaagacaatcaacaattgatgctacttttgatgcaataagctatacttttacta 32528417  T
Q  415 taatgaccttatttatttaa 434  Q
    |||||| |||||| ||||||    
T  32528418 taatgatcttattcatttaa 32528437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 326 - 434
Target Start/End: Original strand, 36298175 - 36298283
Alignment:
Q  326 tttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctta 425  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||| ||||| ||||||||||||||||||||| |||| ||||||||||||||| |||    
T  36298175 tttttaattgtcacattttgacattttacacaaatcaaaacaatcaataattgttactacttttgatgcaataagttatatttttactataatgacttta 36298274  T
Q  426 tttatttaa 434  Q
    || ||||||    
T  36298275 ttcatttaa 36298283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 316 - 434
Target Start/End: Complemental strand, 26724177 - 26724058
Alignment:
Q  316 cctccgtttctttttaattgtcacatttt-gacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    |||||||| |||||||||||||||||||| |||||||||| |||||||| ||||||||  |||  ||||||||||||||||||||| |||||||||||||    
T  26724177 cctccgttcctttttaattgtcacatttttgacattttacacaaaccaagacaatcaatgattattactacttttgatgcaataagttatacttttacta 26724078  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  26724077 taatgaccttattcatttaa 26724058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 325 - 434
Target Start/End: Complemental strand, 3838105 - 3837996
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctt 424  Q
    ||||||||||||||| ||||||||||||||||||| ||| |||||||| ||||| || |||||||||||| ||||| |||||||||||||||||||||||    
T  3838105 ctttttaattgtcactttttgacattttacgcaaatcaagacaatcaataattgttattacttttgatgccataagttatacttttactataatgacctt 3838006  T
Q  425 atttatttaa 434  Q
    ||| ||||||    
T  3838005 attcatttaa 3837996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 36922493 - 36922373
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactac-ttttgatgcaataagctatacttttact 413  Q
    ||||||||| |||||||||||||||||||||||||||||   ||| ||| ||||||||||||||||| ||| |||||||||||||||||||  |||||||    
T  36922493 acctccgttcctttttaattgtcacattttgacattttaaataaatcaagacaatcaacaattgatattactttttgatgcaataagctatgtttttact 36922394  T
Q  414 ataatgaccttatttatttaa 434  Q
    |||||||||||||| ||||||    
T  36922393 ataatgaccttattcatttaa 36922373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 5732063 - 5732182
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||||||||||||||||||||||||||||  ||||||| | | ||||  |||| ||||||||||||||||||||| | |||||||||||    
T  5732063 acctccgttcctttttaattgtcacattttgacattttacataaaccaagatagtcaatgattgttactacttttgatgcaataagttgtacttttacta 5732162  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  5732163 taatgaccttattcatttaa 5732182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 10227509 - 10227390
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||||||||||||| |||| ||||||||| |||| ||| |||||||| ||||  | ||||||||||||||||||| |||||||||||||    
T  10227509 acctccgttcctttttaattgtcactttttaacattttacacaaatcaagacaatcaataattatttctacttttgatgcaataagttatacttttacta 10227410  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  10227409 taatgaccttattaatttaa 10227390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 22950808 - 22950927
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||| ||| |||||||||||| | ||||||||||||||| |||||||| ||||| || ||||||||||||||||||| |||||||||||||||||| ||    
T  22950808 acctctgttcctttttaattgttatattttgacattttacacaaaccaagacaataaaaaattgatactacttttgatacaataagctatacttttatta 22950907  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||| ||||| ||||||    
T  22950908 taatgacattattcatttaa 22950927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 41675177 - 41675295
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||| ||| ||||||||||||||||||||||||||||||  ||||||| |||||||| ||||||| ||| |||||||||||||||||||| ||||||||    
T  41675177 acctctgttcctttttaattgtcacattttgacattttacataaaccaagacaatcaataattgat-ctatttttgatgcaataagctatagttttacta 41675275  T
Q  415 taatgaccttatttatttaa 434  Q
    ||| ||||||||| ||||||    
T  41675276 taacgaccttattcatttaa 41675295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 339 - 434
Target Start/End: Original strand, 44480156 - 44480251
Alignment:
Q  339 cattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgaccttatttatttaa 434  Q
    |||||||||||||||| |||||||| |||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||| ||||||    
T  44480156 cattttgacattttacacaaaccaagacaatcaacaattgatactattttttatgcaataagctatatttttactataatgaccttattcatttaa 44480251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 318 - 434
Target Start/End: Original strand, 7477191 - 7477307
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataa 417  Q
    ||||||||||||||||||| |||||||||||||||||  |||| || | | ||||  |||| ||||||||||||||||||||| ||||||||||||||||    
T  7477191 tccgtttctttttaattgttacattttgacattttacataaactaagatagtcaatgattgttactacttttgatgcaataagttatacttttactataa 7477290  T
Q  418 tgaccttatttatttaa 434  Q
    |||||||||| ||||||    
T  7477291 tgaccttattaatttaa 7477307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 318 - 433
Target Start/End: Original strand, 31398925 - 31399040
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataa 417  Q
    |||||| ||||||||||||||||||||  ||||||||  ||||||| ||||| || |||||||||||||||||||  ||||| |||||||||||||||||    
T  31398925 tccgttgctttttaattgtcacattttagcattttacataaaccaagacaattaaaaattgatactacttttgatataataaactatacttttactataa 31399024  T
Q  418 tgaccttatttattta 433  Q
    |||||||||| |||||    
T  31399025 tgaccttattcattta 31399040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 47408366 - 47408247
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||||||||||||| |||||||||||||| |||||||| ||| |||| || || ||||||||||||| ||||||  |||||||||||||    
T  47408366 acctccgttcctttttaattgtcactttttgacattttacacaaaccaagacattcaataaatgttactacttttgatacaataatatatacttttacta 47408267  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| |||||||| ||||||    
T  47408266 taataaccttattcatttaa 47408247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 310 - 434
Target Start/End: Complemental strand, 33174065 - 33173941
Alignment:
Q  310 ctaccacctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttt 409  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||  ||||||||| | ||||  |||| ||||||||||||| ||||||| | ||||||    
T  33174065 ctactacctccgttcctttttaattgtcacattttgacattttacataaaccaaaatagtcaatgattgttactacttttgatacaataagttgtacttt 33173966  T
Q  410 tactataatgaccttatttatttaa 434  Q
    || |||||||| |||||| ||||||    
T  33173965 taatataatgatcttattcatttaa 33173941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 38168778 - 38168898
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaatt-gatactacttttgatgcaataagctatacttttact 413  Q
    ||||||||||||||||||||||||| |||| | ||||||| |||||||| |||||||  |||| | ||||| ||||||||||||||| |||||||||| |    
T  38168778 acctccgtttctttttaattgtcactttttaatattttacacaaaccaagacaatcattaatttgttactatttttgatgcaataagttatacttttatt 38168877  T
Q  414 ataatgaccttatttatttaa 434  Q
    |||||||||||||| ||||||    
T  38168878 ataatgaccttattcatttaa 38168898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 33921764 - 33921883
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||||||||||| |||||||||  |||| || | | ||||  |||| ||||||||||||||||||||  |||| ||||||||    
T  33921764 acctccgttcctttttaattgtcacattttaacattttacataaactaagatagtcaatgattgttactacttttgatgcaataaattatatttttacta 33921863  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  33921864 taatgaccttattcatttaa 33921883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 315 - 389
Target Start/End: Original strand, 17896481 - 17896555
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactactttt 389  Q
    ||||||||| |||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||    
T  17896481 acctccgttcctttttaattgtcacattttgacattttacacaaatcaagacaatcaacaattgatactactttt 17896555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 371 - 434
Target Start/End: Original strand, 17896569 - 17896632
Alignment:
Q  371 aacaattgatactacttttgatgcaataagctatacttttactataatgaccttatttatttaa 434  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  17896569 aacaattgatattacttttgatgcaataagctatatttttactataatgaccttattcatttaa 17896632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 371 - 434
Target Start/End: Original strand, 26632226 - 26632289
Alignment:
Q  371 aacaattgatactacttttgatgcaataagctatacttttactataatgaccttatttatttaa 434  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26632226 aacaaatgatactatttttgatgcaataagctatacttttactataatgaccttattcatttaa 26632289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 33258134 - 33258015
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||||||||||||  |||||||||||||| |||| ||| |||||||| || |  ||||||||||||| |||||    ||||||||||||    
T  33258134 acctccgttcctttttaattgtcattttttgacattttacacaaatcaatacaatcaataaatattactacttttgatacaatacttcatacttttacta 33258035  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| |||||||| ||||||    
T  33258034 taataaccttattcatttaa 33258015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 365 - 434
Target Start/End: Complemental strand, 20035251 - 20035182
Alignment:
Q  365 acaatcaacaattgatactacttttgatgcaataagctatacttttactataatgaccttatttatttaa 434  Q
    ||||||||||||||||| | ||||| |||||||||||||||||||||||||||||| |||||| ||||||    
T  20035251 acaatcaacaattgatattccttttaatgcaataagctatacttttactataatgatcttattcatttaa 20035182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 365 - 434
Target Start/End: Complemental strand, 20045662 - 20045593
Alignment:
Q  365 acaatcaacaattgatactacttttgatgcaataagctatacttttactataatgaccttatttatttaa 434  Q
    ||||||||||||||||| | ||||| |||||||||||||||||||||||||||||| |||||| ||||||    
T  20045662 acaatcaacaattgatattccttttaatgcaataagctatacttttactataatgatcttattcatttaa 20045593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 325 - 434
Target Start/End: Complemental strand, 28608837 - 28608728
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctt 424  Q
    |||||||||||||| ||||||| ||||||| |||| ||| |||||||| || || | ||||||||||| ||||||  | || |||||||||||| |||||    
T  28608837 ctttttaattgtcatattttgatattttacacaaatcaagacaatcaataaatgttgctacttttgatacaataatttttatttttactataataacctt 28608738  T
Q  425 atttatttaa 434  Q
    ||||||||||    
T  28608737 atttatttaa 28608728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 322 - 434
Target Start/End: Original strand, 37353866 - 37353979
Alignment:
Q  322 tttctttttaa-ttgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatga 420  Q
    ||||||||||| |||| || | ||||||||||||   || |||||||||||| ||||| |||||||| |||||||||||| || | ||||||||||||||    
T  37353866 tttctttttaagttgttacttgttgacattttacatgaatcaaaacaatcaataattgttactacttctgatgcaataagttacatttttactataatga 37353965  T
Q  421 ccttatttatttaa 434  Q
    ||||||| ||||||    
T  37353966 ccttattcatttaa 37353979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 318 - 434
Target Start/End: Original strand, 42841859 - 42841975
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagcta-tacttttactata 416  Q
    |||||| ||||||||||||||| |||||| ||||||| |||||||| |||||||| || || ||||||||||||| ||||  | || |||||||||||||    
T  42841859 tccgttcctttttaattgtcactttttgatattttacacaaaccaagacaatcaataaatgttactacttttgatacaat-tgttattacttttactata 42841957  T
Q  417 atgaccttatttatttaa 434  Q
    |||||||| || ||||||    
T  42841958 atgaccttgttaatttaa 42841975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 330 - 434
Target Start/End: Original strand, 36648011 - 36648114
Alignment:
Q  330 taattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgaccttattta 429  Q
    |||||||||| |||| ||||||||| |||||||| |||||||| ||||  |  |||||||||||||||||| ||| ||||||||||||||||||| || |    
T  36648011 taattgtcac-ttttaacattttacacaaaccaagacaatcaataattatttttacttttgatgcaataagttatgcttttactataatgaccttgttaa 36648109  T
Q  430 tttaa 434  Q
    |||||    
T  36648110 tttaa 36648114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 326 - 434
Target Start/End: Complemental strand, 35112671 - 35112563
Alignment:
Q  326 tttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctta 425  Q
    |||||||||||||| |||||||||||||| ||||| || |||||||| || |  ||||||||||||| |||||    ||| |||||||||||| || |||    
T  35112671 tttttaattgtcactttttgacattttacacaaacaaatacaatcaataaatattactacttttgatacaatacttcatatttttactataataacttta 35112572  T
Q  426 tttatttaa 434  Q
    |||||||||    
T  35112571 tttatttaa 35112563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 315 - 397
Target Start/End: Complemental strand, 3310458 - 3310377
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaat 397  Q
    ||||||||| |||||||| ||||| |||||||||||||||||||||||| |||||||| || |  || |||||||||||||||    
T  3310458 acctccgttcctttttaactgtcatattttgacattttacgcaaaccaagacaatcaataa-tattattacttttgatgcaat 3310377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 325 - 399
Target Start/End: Original strand, 19327791 - 19327865
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataa 399  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||| || |  | ||||||||||| ||||||    
T  19327791 ctttttaattgtcacattttaacattttacacaaaccaaaacaatcaataaatattgctacttttgatacaataa 19327865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 318 - 434
Target Start/End: Original strand, 18194207 - 18194323
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataa 417  Q
    |||||| ||||||||||||||  |||| | ||||||| |||||||| |||||||| || |||||||||||||||| ||||    | | ||||||||||||    
T  18194207 tccgttcctttttaattgtcagtttttcaaattttacacaaaccaagacaatcaataaatgatactacttttgatacaattgtttttgcttttactataa 18194306  T
Q  418 tgaccttatttatttaa 434  Q
    |  ||||||| ||||||    
T  18194307 tagccttattaatttaa 18194323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 31815059 - 31815177
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||||||||||||  |||| ||||||||| |||| ||| | |||||| || || ||||||||||||| |||| |  | |||||||||||    
T  31815059 acctccgttcctttttaattgtcattttttaacattttacacaaatcaagataatcaataa-tgttactacttttgatacaattatttttacttttacta 31815157  T
Q  415 taatgaccttatttatttaa 434  Q
    |||||  |||||| ||||||    
T  31815158 taatggtcttattaatttaa 31815177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 315 - 394
Target Start/End: Original strand, 44820597 - 44820676
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgc 394  Q
    |||||||||  ||||||| ||||| ||||||||||||||  |||||||| |||||||| ||||  |||||||||||||||    
T  44820597 acctccgttcatttttaactgtcatattttgacattttatacaaaccaagacaatcaataattattactacttttgatgc 44820676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 325 - 434
Target Start/End: Original strand, 35746645 - 35746754
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctt 424  Q
    ||||||||||||||| |||| |||||||||  |||  || |||||||| || || ||||| ||||||| |||| |  | |||||||||||||||| ||||    
T  35746645 ctttttaattgtcactttttaacattttacataaattaagacaatcaataaatgttactatttttgatacaattatttttacttttactataatggcctt 35746744  T
Q  425 atttatttaa 434  Q
    ||| ||||||    
T  35746745 attaatttaa 35746754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 339 - 434
Target Start/End: Complemental strand, 45324250 - 45324158
Alignment:
Q  339 cattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgaccttatttatttaa 434  Q
    |||||| ||||||||| |||||||| ||||||||  |||   | || ||||||||||||||| |||||||||| ||||||||  ||||||||||||    
T  45324250 cattttaacattttacacaaaccaatacaatcaattatt---attatttttgatgcaataagttatacttttattataatgattttatttatttaa 45324158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 399
Target Start/End: Complemental strand, 6799672 - 6799588
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataa 399  Q
    ||||||||| ||||||||||||||||| ||||||||||||  ||||||| ||| |||   |||| ||||| ||||||||| ||||    
T  6799672 acctccgttcctttttaattgtcacatgttgacattttacataaaccaagacagtcagtgattgttactatttttgatgcgataa 6799588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 363
Target Start/End: Complemental strand, 36407007 - 36406959
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaa 363  Q
    |||||||||||||||||| |||||| |||||||||||||| ||||||||    
T  36407007 acctccgtttctttttaactgtcactttttgacattttacacaaaccaa 36406959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 9601886 - 9601931
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaa 363  Q
    |||||| ||||||||||||||||||||||| |||||| ||||||||    
T  9601886 tccgttcctttttaattgtcacattttgactttttacacaaaccaa 9601931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 9829457 - 9829502
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaa 363  Q
    |||||| ||||||||||||||||||||||| |||||| ||||||||    
T  9829457 tccgttcctttttaattgtcacattttgactttttacacaaaccaa 9829502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 327 - 368
Target Start/End: Complemental strand, 22786120 - 22786079
Alignment:
Q  327 ttttaattgtcacattttgacattttacgcaaaccaaaacaa 368  Q
    ||||||||||||||||||||| |||||| |||||||||||||    
T  22786120 ttttaattgtcacattttgactttttacacaaaccaaaacaa 22786079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 24283832 - 24283714
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||||||||||||  |||| || |||||| ||||| || ||||| || || || |||||||||||||  ||| |  | |||||||||||    
T  24283832 acctccgttcctttttaattgtcatttttttaccttttacacaaactaagacaattaataaatgttactacttttgatataatta-ttttacttttacta 24283734  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||| || || ||||||    
T  24283733 taatgactttgttaatttaa 24283714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 372
Target Start/End: Original strand, 41888986 - 41889041
Alignment:
Q  317 ctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaa 372  Q
    ||||||| |||||||||| |||| || ||||||||||| |||||||| ||||||||    
T  41888986 ctccgttcctttttaattatcactttgtgacattttacacaaaccaagacaatcaa 41889041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 372
Target Start/End: Original strand, 35683209 - 35683259
Alignment:
Q  322 tttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaa 372  Q
    ||||||||||||| |||| ||||||||||||||  | ||||||||||||||    
T  35683209 tttctttttaattatcaccttttgacattttacatacaccaaaacaatcaa 35683259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 363
Target Start/End: Complemental strand, 35860216 - 35860170
Alignment:
Q  317 ctccgtttctttttaattgtcacattttgacattttacgcaaaccaa 363  Q
    ||||||| |||||||||||| |||||||||| |||||| ||||||||    
T  35860216 ctccgttcctttttaattgttacattttgactttttacacaaaccaa 35860170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 427
Target Start/End: Original strand, 43874083 - 43874185
Alignment:
Q  325 ctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctt 424  Q
    ||||||||| ||| | |||||||||||||| | ||| || ||| |||| || || ||||||||||||| ||| ||  ||  ||||||||||||| |||||    
T  43874083 ctttttaatggtctctttttgacattttacacgaacaaatacattcaataaatgttactacttttgatacaacaatatactcttttactataataacctt 43874182  T
Q  425 att 427  Q
    |||    
T  43874183 att 43874185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 315 - 372
Target Start/End: Original strand, 30866726 - 30866783
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaa 372  Q
    ||||||||| |||||||| |||||  |||||||||||||| |||||||| ||| ||||    
T  30866726 acctccgttcctttttaactgtcattttttgacattttacacaaaccaagacactcaa 30866783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 425 - 457
Target Start/End: Complemental strand, 29165553 - 29165521
Alignment:
Q  425 atttatttaagggttaaatatgtttttggtccc 457  Q
    ||||| |||||||||||||||||||||||||||    
T  29165553 atttaattaagggttaaatatgtttttggtccc 29165521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 425 - 457
Target Start/End: Complemental strand, 33507674 - 33507642
Alignment:
Q  425 atttatttaagggttaaatatgtttttggtccc 457  Q
    |||||||||| ||||||||||||||||||||||    
T  33507674 atttatttaaaggttaaatatgtttttggtccc 33507642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 429 - 457
Target Start/End: Complemental strand, 41298772 - 41298744
Alignment:
Q  429 atttaagggttaaatatgtttttggtccc 457  Q
    |||||||||||||||||||||||||||||    
T  41298772 atttaagggttaaatatgtttttggtccc 41298744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 69352 - 69234
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||| |||||||||||||||||||||||| |||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  69352 acctccgttccttttcaattgtcacattttgacattttacacaaaccaagacaatcaacaatt-atactatttttgatgcaataagctatacttttacta 69254  T
Q  415 taatgaccttatttatttaa 434  Q
    |||||| |||||| ||||||    
T  69253 taatgaacttattcatttaa 69234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 77341 - 77222
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||| |||||||||||||||| ||||||||| |||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  77341 acctccgttccttcttaattgtcacattttaacattttacacaaatcaagacaatcaacaattgatactacttttgatgcaataaactatacttttacta 77242  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| |||||||| ||||||    
T  77241 taataaccttattcatttaa 77222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 81; Significance: 6e-38; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 326 - 434
Target Start/End: Original strand, 26126 - 26234
Alignment:
Q  326 tttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctta 425  Q
    ||||||||||||| |||||||||||||||  ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  26126 tttttaattgtcatattttgacattttacataaaccaagacaatcaacaattgatattacttttgatgcaataagctatacttttattataatgacctta 26225  T
Q  426 tttatttaa 434  Q
    || ||||||    
T  26226 ttcatttaa 26234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0886 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 4767 - 4649
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||||||||||||||||| |  |||||||  ||||||| |||||||| ||||| ||||||||||||||||||||| |||| ||||||||    
T  4767 acctccgttcctttttaattgtcacatttggt-attttacataaaccaagacaatcaataattgttactacttttgatgcaataagttatatttttacta 4669  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||||||||||    
T  4668 taatgaccttatttatttaa 4649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 315 - 434
Target Start/End: Complemental strand, 148556 - 148437
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||||| | |||||||||||||||  ||||||| ||||| || |||||||||||||||||||  |||||| |||||||||||||    
T  148556 acctccgttcctttttaattgttatattttgacattttacataaaccaagacaataaaaaattgatactacttttgatataataagttatacttttacta 148457  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||||||||||| ||||||    
T  148456 taatgaccttattcatttaa 148437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 380
Target Start/End: Original strand, 138733 - 138795
Alignment:
Q  318 tccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgat 380  Q
    |||||| |||||||||||||||||||| ||||||||  |||||||| ||||||||||||||||    
T  138733 tccgttcctttttaattgtcacatttttacattttatacaaaccaagacaatcaacaattgat 138795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 326 - 434
Target Start/End: Original strand, 195586 - 195694
Alignment:
Q  326 tttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctta 425  Q
    ||||||||||||||||||||||||||||| |||||||| | |||| |||||||||||||  |||||| |||||| ||||||||||||||||| || ||||    
T  195586 tttttaattgtcacattttgacattttacacaaaccaagataatcgacaattgatactatgtttgatacaataaactatacttttactataacgatctta 195685  T
Q  426 tttatttaa 434  Q
    || ||||||    
T  195686 ttcatttaa 195694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 457
Target Start/End: Complemental strand, 123564 - 123530
Alignment:
Q  423 ttatttatttaagggttaaatatgtttttggtccc 457  Q
    |||||||||||||||||||||||||||||||||||    
T  123564 ttatttatttaagggttaaatatgtttttggtccc 123530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 419480 - 419599
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||| ||||||||||||||||||| || |||||||||||  ||||||| |||||||| || || ||||||||||||| ||||||   ||||||||||||    
T  419480 acctctgtttctttttaattgtcactttgtgacattttacataaaccaagacaatcaataaatgttactacttttgatacaataattgatacttttacta 419579  T
Q  415 taatgaccttatttatttaa 434  Q
    |||| | |||||||||||||    
T  419580 taataatcttatttatttaa 419599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0831 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0831
Description:

Target: scaffold0831; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 316 - 434
Target Start/End: Complemental strand, 3061 - 2941
Alignment:
Q  316 cctccgtttctttttaattgtcacattttg-acattttacgcaaaccaaaacaatcaacaatt-gatactacttttgatgcaataagctatacttttact 413  Q
    |||||||| ||||||||||||||| ||||  | ||||||| |||||||| |||||||  |||| | ||||||||||||||||||||| |||||||||| |    
T  3061 cctccgttcctttttaattgtcactttttttatattttacacaaaccaagacaatcagtaatttgttactacttttgatgcaataagttatacttttatt 2962  T
Q  414 ataatgaccttatttatttaa 434  Q
    |||||||||||||| ||||||    
T  2961 ataatgaccttattcatttaa 2941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 315 - 434
Target Start/End: Original strand, 147115 - 147234
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| ||||||||||||||| |||||||||||||| |||| ||||||||| || || || ||||||||||||| ||||    |  | ||||||||    
T  147115 acctccgttcctttttaattgtcactttttgacattttacacaaatcaaaacaattaataaatgttactacttttgatacaattgttttcatttttacta 147214  T
Q  415 taatgaccttatttatttaa 434  Q
    ||||| ||||||| ||||||    
T  147215 taatggccttattaatttaa 147234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1213 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold1213
Description:

Target: scaffold1213; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 365 - 434
Target Start/End: Original strand, 5 - 74
Alignment:
Q  365 acaatcaacaattgatactacttttgatgcaataagctatacttttactataatgaccttatttatttaa 434  Q
    |||||||| ||||  ||||||||||||||||||||| | |||||||||||||||||||||||| ||||||    
T  5 acaatcaataattattactacttttgatgcaataagttgtacttttactataatgaccttattcatttaa 74  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 310 - 435
Target Start/End: Complemental strand, 7682 - 7557
Alignment:
Q  310 ctaccacctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagcta-tactt 408  Q
    |||| |||| |||| ||||||||||||||| |||||| ||||||| |||| ||| |||||||| || |  ||||||||||||| ||||  | || |||||    
T  7682 ctactaccttcgttcctttttaattgtcactttttgatattttacacaaatcaagacaatcaataaatattactacttttgatacaat-tgttattactt 7584  T
Q  409 ttactataatgaccttatttatttaag 435  Q
    |||||||||||||||| || |||||||    
T  7583 ttactataatgaccttgttaatttaag 7557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 315 - 424
Target Start/End: Original strand, 30680 - 30789
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||||||||||||||||||| |||||| ||||||| |||| ||| ||||| || || |  ||||||||||||| ||||    | |||||||||||    
T  30680 acctccgtttctttttaattgtcactttttgaaattttacacaaaacaagacaattaataaatcttactacttttgatacaattgtttttacttttacta 30779  T
Q  415 taatgacctt 424  Q
    ||| ||||||    
T  30780 taaagacctt 30789  T

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Target: scaffold0471 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 326 - 434
Target Start/End: Original strand, 1818 - 1924
Alignment:
Q  326 tttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctta 425  Q
    ||||||| ||||||  ||||||||||||| |||||||| ||| |||| || || ||||  || | || |||||| |||||||||||||||||| ||||||    
T  1818 tttttaactgtcac--tttgacattttacacaaaccaagacactcaataaatgttactttttcttatacaataatctatacttttactataataacctta 1915  T
Q  426 tttatttaa 434  Q
     | ||||||    
T  1916 gtcatttaa 1924  T

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Target: scaffold0274 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0274
Description:

Target: scaffold0274; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 315 - 427
Target Start/End: Original strand, 228 - 339
Alignment:
Q  315 acctccgtttctttttaattgtcacattttgacattttacgcaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttacta 414  Q
    ||||||||| |||||||||| |||  |||||| ||||||  |||||||| ||| ||||  | || ||||||||||||| ||| ||  |||| ||||||||    
T  228 acctccgttcctttttaattatcat-ttttgatattttatacaaaccaagacattcaatgaatgttactacttttgatacaacaatgtatatttttacta 326  T
Q  415 taatgaccttatt 427  Q
    |||| ||||||||    
T  327 taataaccttatt 339  T

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Target: scaffold0775 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 423 - 457
Target Start/End: Complemental strand, 1340 - 1306
Alignment:
Q  423 ttatttatttaagggttaaatatgtttttggtccc 457  Q
    ||||| |||||||||||||||||||||||||||||    
T  1340 ttattaatttaagggttaaatatgtttttggtccc 1306  T

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Target: scaffold0019 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 423 - 457
Target Start/End: Original strand, 42847 - 42881
Alignment:
Q  423 ttatttatttaagggttaaatatgtttttggtccc 457  Q
    ||||||||| |||||||||||||||||||||||||    
T  42847 ttatttattaaagggttaaatatgtttttggtccc 42881  T

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Target: scaffold0085 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 429 - 457
Target Start/End: Original strand, 39414 - 39442
Alignment:
Q  429 atttaagggttaaatatgtttttggtccc 457  Q
    |||||||||||||||||||||||||||||    
T  39414 atttaagggttaaatatgtttttggtccc 39442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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