View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1173_low_8 (Length: 376)
Name: NF1173_low_8
Description: NF1173
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1173_low_8 |
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Alignment Details
Target: chr6 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 10 - 285
Target Start/End: Original strand, 9080154 - 9080429
Alignment:
| Q |
10 |
aagaatatgttagaggatgaaaagcttgccatttcaaagtttttaaggaggtaaattagcctattaaattaacattggagaaaatcgaatataaaaattt |
109 |
Q |
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| T |
9080154 |
aagaaaatgttagaggatgaaaagcttgccatttcaatttttttaaggaggtaaattagcctattaaattaacaccgaagaaaatcgaatatgaaaattt |
9080253 |
T |
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| Q |
110 |
gagaagagcacattctaagatctcaaagataataccaaaaagaatcaaatatgagaatatatttttgacattgttgtttcggaaccctaagttctgaaga |
209 |
Q |
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| T |
9080254 |
aagaagagcacattctaagatctcaaagataataccgaaaagaatcgaatataagaatatatttttgacattgttgtttagaaaccctaaattctgaaga |
9080353 |
T |
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| Q |
210 |
tattttataacagttacattacatcaattatttcataatttcgattaaaagaatctgaattcaaattctacctaaa |
285 |
Q |
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||||||||| | |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
9080354 |
tattttatagcggttacattacatcaatcatttcataatttcgtttaaaagaatctgaattcaaattctacctaaa |
9080429 |
T |
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