View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11740_high_32 (Length: 260)
Name: NF11740_high_32
Description: NF11740
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11740_high_32 |
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Alignment Details
Target: chr7 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 18 - 247
Target Start/End: Original strand, 48708314 - 48708542
Alignment:
| Q |
18 |
acaagtactatgaagtcaaaattaatagggtcgaagttannnnnnnnnacttgctatatatgctagtgtagtgaatttcacccaacaaacagaagaaagc |
117 |
Q |
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| T |
48708314 |
acaagtactatgaagtcaaaattaatagggtcgaagttatttttttttacttgctatatatgctagtgtagtgaatttcacccaacaaaaagaagaaagc |
48708413 |
T |
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| Q |
118 |
ttttt-atacttctcttatgtgactcactatactacactagtatagaaagcttagatctgtcatgcaatgataactttgactatctttttagatctgaaa |
216 |
Q |
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||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
48708414 |
ttttttatacttctcttttg--actcactatactacactagtatagaaagcttagatctgccatgcaatgataactttgactatctttttagatctgaaa |
48708511 |
T |
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| Q |
217 |
aaacagtgtcccttcttgtttttcttcctct |
247 |
Q |
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|||||| |||||||||||||||||||||||| |
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| T |
48708512 |
aaacagcgtcccttcttgtttttcttcctct |
48708542 |
T |
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