View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11740_low_21 (Length: 372)

Name: NF11740_low_21
Description: NF11740
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11740_low_21
NF11740_low_21
[»] chr5 (35 HSPs)
chr5 (73-190)||(20496737-20496854)
chr5 (187-271)||(4173010-4173094)
chr5 (188-271)||(9957088-9957171)
chr5 (198-271)||(40201018-40201090)
chr5 (186-271)||(17574109-17574194)
chr5 (188-271)||(20985417-20985499)
chr5 (198-271)||(12612914-12612987)
chr5 (198-263)||(38919955-38920020)
chr5 (187-270)||(37821027-37821110)
chr5 (198-260)||(12203257-12203319)
chr5 (189-270)||(35616689-35616770)
chr5 (18-53)||(20496682-20496717)
chr5 (186-241)||(21771358-21771413)
chr5 (188-270)||(18729164-18729246)
chr5 (189-270)||(39032492-39032573)
chr5 (198-271)||(43152957-43153030)
chr5 (212-271)||(28501718-28501778)
chr5 (222-269)||(5043028-5043075)
chr5 (220-271)||(15622145-15622196)
chr5 (220-271)||(33823613-33823664)
chr5 (189-271)||(3518284-3518366)
chr5 (342-372)||(34693257-34693287)
chr5 (339-372)||(3031834-3031867)
chr5 (339-372)||(8442170-8442203)
chr5 (339-372)||(12203158-12203191)
chr5 (189-270)||(14126516-14126597)
chr5 (339-372)||(14523002-14523035)
chr5 (339-372)||(18729327-18729360)
chr5 (339-372)||(25585494-25585527)
chr5 (342-371)||(30103492-30103521)
chr5 (339-372)||(32732145-32732178)
chr5 (198-271)||(33893687-33893760)
chr5 (339-372)||(38387610-38387643)
chr5 (339-372)||(39032642-39032675)
chr5 (339-367)||(7080546-7080574)
[»] chr3 (32 HSPs)
chr3 (187-271)||(2935397-2935481)
chr3 (189-271)||(49361725-49361807)
chr3 (189-271)||(48205146-48205228)
chr3 (189-271)||(48490401-48490483)
chr3 (186-271)||(9027714-9027799)
chr3 (198-271)||(51385337-51385410)
chr3 (189-271)||(33971984-33972066)
chr3 (189-271)||(43149231-43149313)
chr3 (189-270)||(29555729-29555810)
chr3 (186-263)||(43220027-43220104)
chr3 (187-271)||(48117437-48117521)
chr3 (187-270)||(14838931-14839014)
chr3 (339-372)||(30664503-30664536)
chr3 (185-270)||(44689905-44689990)
chr3 (339-372)||(49361862-49361895)
chr3 (339-372)||(50745560-50745593)
chr3 (220-271)||(13159762-13159813)
chr3 (220-271)||(32931837-32931888)
chr3 (220-271)||(36819057-36819108)
chr3 (186-241)||(40821745-40821800)
chr3 (220-271)||(54233420-54233471)
chr3 (201-271)||(9158936-9159006)
chr3 (220-270)||(29533863-29533913)
chr3 (342-372)||(48205045-48205075)
chr3 (186-271)||(2280278-2280363)
chr3 (339-372)||(9159074-9159107)
chr3 (339-372)||(14839083-14839116)
chr3 (339-372)||(29057659-29057692)
chr3 (339-372)||(29846918-29846951)
chr3 (186-270)||(21481866-21481949)
chr3 (187-271)||(29846777-29846861)
chr3 (339-371)||(44689793-44689825)
[»] chr1 (31 HSPs)
chr1 (183-270)||(1100319-1100406)
chr1 (189-266)||(835977-836054)
chr1 (184-270)||(41564763-41564849)
chr1 (188-266)||(50796108-50796185)
chr1 (198-271)||(37947117-37947190)
chr1 (187-270)||(27954330-27954413)
chr1 (179-270)||(46903572-46903663)
chr1 (198-271)||(8577399-8577472)
chr1 (198-271)||(31244632-31244705)
chr1 (187-263)||(11897283-11897359)
chr1 (220-271)||(29489278-29489329)
chr1 (188-270)||(23399876-23399958)
chr1 (188-270)||(48962088-48962170)
chr1 (198-271)||(40240008-40240081)
chr1 (339-371)||(5574297-5574329)
chr1 (189-241)||(12990373-12990425)
chr1 (220-271)||(13813659-13813710)
chr1 (220-271)||(25130804-25130855)
chr1 (198-260)||(11121592-11121654)
chr1 (342-372)||(40118756-40118786)
chr1 (339-372)||(1100217-1100250)
chr1 (339-372)||(12990507-12990540)
chr1 (339-372)||(16252786-16252819)
chr1 (339-372)||(27954243-27954276)
chr1 (339-372)||(28457385-28457418)
chr1 (189-270)||(29638817-29638898)
chr1 (339-372)||(30414875-30414908)
chr1 (339-372)||(31244771-31244804)
chr1 (339-372)||(41564918-41564951)
chr1 (187-263)||(40053015-40053091)
chr1 (339-371)||(50460739-50460771)
[»] chr2 (54 HSPs)
chr2 (188-271)||(3366132-3366215)
chr2 (189-271)||(37076754-37076836)
chr2 (186-271)||(9384476-9384561)
chr2 (188-271)||(12208543-12208626)
chr2 (190-269)||(28264631-28264710)
chr2 (189-263)||(23141463-23141537)
chr2 (189-263)||(23553253-23553327)
chr2 (189-263)||(30340103-30340177)
chr2 (186-270)||(1277833-1277917)
chr2 (190-256)||(3681479-3681545)
chr2 (188-271)||(8757645-8757728)
chr2 (187-246)||(33569694-33569753)
chr2 (189-270)||(12257003-12257084)
chr2 (186-263)||(35007986-35008063)
chr2 (189-270)||(38598238-38598318)
chr2 (187-263)||(37064167-37064243)
chr2 (188-270)||(16463394-16463476)
chr2 (188-270)||(35518377-35518459)
chr2 (188-270)||(38027502-38027584)
chr2 (189-271)||(43205194-43205276)
chr2 (189-270)||(5852560-5852641)
chr2 (186-271)||(13711162-13711246)
chr2 (198-271)||(27538829-27538902)
chr2 (188-241)||(28679258-28679311)
chr2 (339-372)||(34141442-34141475)
chr2 (189-270)||(34141545-34141626)
chr2 (187-271)||(11828706-11828790)
chr2 (189-241)||(26387719-26387771)
chr2 (187-271)||(27529628-27529712)
chr2 (187-271)||(35705803-35705887)
chr2 (189-269)||(38533086-38533166)
chr2 (187-271)||(45202018-45202102)
chr2 (220-271)||(23048002-23048053)
chr2 (220-271)||(36383563-36383614)
chr2 (220-271)||(37966457-37966508)
chr2 (185-271)||(3091842-3091927)
chr2 (342-372)||(12256901-12256931)
chr2 (339-369)||(28679131-28679161)
chr2 (185-271)||(36133075-36133160)
chr2 (184-270)||(40721873-40721959)
chr2 (339-372)||(5852474-5852507)
chr2 (339-372)||(12208442-12208475)
chr2 (339-372)||(13881106-13881139)
chr2 (339-372)||(14021231-14021264)
chr2 (339-372)||(22296156-22296189)
chr2 (339-372)||(27329136-27329169)
chr2 (339-372)||(27538943-27538976)
chr2 (339-372)||(30339993-30340026)
chr2 (186-271)||(35203634-35203719)
chr2 (186-270)||(43791676-43791760)
chr2 (339-372)||(43820779-43820812)
chr2 (339-372)||(44897626-44897659)
chr2 (186-270)||(24491562-24491646)
chr2 (187-271)||(40115616-40115700)
[»] chr7 (36 HSPs)
chr7 (193-271)||(25272692-25272770)
chr7 (189-271)||(49142405-49142487)
chr7 (195-271)||(40108225-40108300)
chr7 (193-271)||(33464930-33465007)
chr7 (189-270)||(23034201-23034282)
chr7 (188-270)||(44185278-44185360)
chr7 (185-263)||(47945092-47945170)
chr7 (185-263)||(47950522-47950600)
chr7 (189-270)||(24380609-24380690)
chr7 (186-270)||(47379662-47379746)
chr7 (220-270)||(7295569-7295619)
chr7 (189-263)||(45335972-45336046)
chr7 (189-270)||(12141986-12142066)
chr7 (189-270)||(29923773-29923853)
chr7 (339-372)||(37848647-37848680)
chr7 (189-270)||(37970035-37970116)
chr7 (189-270)||(41910073-41910154)
chr7 (189-270)||(48639273-48639354)
chr7 (187-271)||(2600420-2600504)
chr7 (187-271)||(22331097-22331181)
chr7 (198-270)||(32315928-32316000)
chr7 (190-270)||(41538582-41538662)
chr7 (220-271)||(42431824-42431875)
chr7 (220-270)||(37149394-37149444)
chr7 (339-372)||(1709284-1709317)
chr7 (339-372)||(25272602-25272635)
chr7 (193-270)||(27704537-27704614)
chr7 (339-372)||(27866564-27866597)
chr7 (339-372)||(33465066-33465099)
chr7 (198-271)||(38197762-38197835)
chr7 (339-372)||(41538482-41538515)
chr7 (339-372)||(42552899-42552932)
chr7 (339-372)||(48522156-48522189)
chr7 (339-372)||(48639421-48639454)
chr7 (339-371)||(23034351-23034383)
chr7 (339-371)||(34349065-34349097)
[»] chr8 (40 HSPs)
chr8 (189-271)||(34641654-34641736)
chr8 (183-270)||(42651022-42651109)
chr8 (188-270)||(25430748-25430830)
chr8 (186-270)||(23709078-23709162)
chr8 (198-260)||(13924121-13924183)
chr8 (198-271)||(1422599-1422672)
chr8 (186-271)||(41776276-41776361)
chr8 (186-270)||(28713195-28713279)
chr8 (186-270)||(28720542-28720626)
chr8 (186-270)||(28728184-28728268)
chr8 (188-271)||(8233383-8233466)
chr8 (189-268)||(28156307-28156386)
chr8 (220-270)||(32234371-32234421)
chr8 (188-270)||(34838157-34838239)
chr8 (339-372)||(6243045-6243078)
chr8 (339-372)||(37471654-37471687)
chr8 (187-271)||(37471744-37471828)
chr8 (187-270)||(43605555-43605638)
chr8 (186-270)||(45405720-45405804)
chr8 (220-271)||(2597079-2597130)
chr8 (220-271)||(30927850-30927901)
chr8 (340-370)||(8233524-8233554)
chr8 (221-271)||(14233564-14233614)
chr8 (342-372)||(18549979-18550009)
chr8 (188-270)||(18550081-18550163)
chr8 (220-270)||(34247876-34247926)
chr8 (339-372)||(13924022-13924055)
chr8 (339-372)||(20996185-20996218)
chr8 (186-263)||(21649055-21649132)
chr8 (339-372)||(21649206-21649239)
chr8 (198-271)||(22203112-22203185)
chr8 (339-372)||(22203253-22203286)
chr8 (186-271)||(22836024-22836109)
chr8 (339-372)||(25430657-25430690)
chr8 (339-372)||(27300346-27300379)
chr8 (193-270)||(27300448-27300525)
chr8 (339-372)||(34578415-34578448)
chr8 (339-372)||(35701865-35701898)
chr8 (339-372)||(36675336-36675369)
chr8 (187-271)||(5742543-5742627)
[»] chr4 (45 HSPs)
chr4 (187-270)||(46355177-46355260)
chr4 (192-266)||(37775318-37775392)
chr4 (186-270)||(50291384-50291468)
chr4 (192-266)||(54801378-54801452)
chr4 (187-270)||(8614284-8614367)
chr4 (188-268)||(18944389-18944469)
chr4 (187-270)||(32574379-32574462)
chr4 (185-271)||(4878068-4878154)
chr4 (189-271)||(45678364-45678446)
chr4 (339-372)||(22893869-22893902)
chr4 (339-372)||(22945537-22945570)
chr4 (186-263)||(36110243-36110320)
chr4 (339-372)||(50291282-50291315)
chr4 (191-270)||(1727979-1728058)
chr4 (220-271)||(5208246-5208297)
chr4 (220-271)||(27001328-27001379)
chr4 (182-241)||(32294633-32294692)
chr4 (220-271)||(47106012-47106063)
chr4 (220-271)||(51377212-51377263)
chr4 (220-263)||(53763730-53763773)
chr4 (220-271)||(53781756-53781807)
chr4 (187-241)||(1868779-1868833)
chr4 (220-270)||(3475970-3476020)
chr4 (220-270)||(4949153-4949203)
chr4 (220-270)||(41170874-41170924)
chr4 (188-270)||(46791878-46791960)
chr4 (342-372)||(51107482-51107512)
chr4 (339-372)||(1868920-1868953)
chr4 (339-372)||(6256487-6256520)
chr4 (339-372)||(7795025-7795058)
chr4 (339-372)||(21766558-21766591)
chr4 (193-270)||(21766649-21766726)
chr4 (339-372)||(24310548-24310581)
chr4 (339-372)||(28899242-28899275)
chr4 (198-271)||(29577333-29577406)
chr4 (198-271)||(33776995-33777068)
chr4 (339-372)||(37731926-37731959)
chr4 (339-372)||(41010196-41010229)
chr4 (186-251)||(43759066-43759130)
chr4 (198-271)||(43982998-43983071)
chr4 (339-372)||(45678274-45678307)
chr4 (186-271)||(47998695-47998778)
chr4 (339-371)||(38960698-38960730)
chr4 (186-270)||(42915105-42915188)
chr4 (339-371)||(54848150-54848182)
[»] scaffold0119 (1 HSPs)
scaffold0119 (186-270)||(23174-23258)
[»] scaffold0014 (2 HSPs)
scaffold0014 (189-270)||(145149-145230)
scaffold0014 (339-372)||(145061-145094)
[»] chr6 (16 HSPs)
chr6 (198-271)||(608558-608631)
chr6 (183-270)||(7303987-7304074)
chr6 (186-271)||(19713095-19713180)
chr6 (339-372)||(32135458-32135491)
chr6 (339-372)||(34792022-34792055)
chr6 (188-241)||(34792137-34792190)
chr6 (186-238)||(17442956-17443008)
chr6 (187-271)||(22422251-22422335)
chr6 (220-271)||(1803970-1804021)
chr6 (188-271)||(9395224-9395307)
chr6 (339-372)||(2165327-2165360)
chr6 (339-372)||(2176960-2176993)
chr6 (339-372)||(16121163-16121196)
chr6 (339-372)||(19712355-19712388)
chr6 (339-372)||(27790273-27790306)
chr6 (339-371)||(16865565-16865597)
[»] scaffold0514 (1 HSPs)
scaffold0514 (189-263)||(1735-1809)
[»] scaffold0024 (2 HSPs)
scaffold0024 (183-270)||(48756-48843)
scaffold0024 (339-369)||(48657-48687)
[»] scaffold0002 (1 HSPs)
scaffold0002 (220-271)||(147175-147226)
[»] scaffold0286 (1 HSPs)
scaffold0286 (339-372)||(17049-17082)


Alignment Details
Target: chr5 (Bit Score: 114; Significance: 1e-57; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 73 - 190
Target Start/End: Original strand, 20496737 - 20496854
Alignment:
Q  73 ttttaacatctttccaaaattgtgtgaattggatttggatgttcattgttgccagcattttataacgtgttaggttattttctgttataattttaagaac 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20496737 ttttaacatctttccaaaattgtgtgaattggatttggatgttcattgttgccagcattttataacgtgttaggttattttctgttataattttaagaac 20496836  T
Q  173 aaagttattgtataaaga 190  Q
    |||||||||||| |||||    
T  20496837 aaagttattgtagaaaga 20496854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 187 - 271
Target Start/End: Original strand, 4173010 - 4173094
Alignment:
Q  187 aagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    |||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  4173010 aagagtagagttatttgaacaactcttttagtacaacctttgtgacaaccttgttattctttcttctcattggtcaataacaatg 4173094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 188 - 271
Target Start/End: Original strand, 9957088 - 9957171
Alignment:
Q  188 agagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    |||||||| |||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||| |||||||||||||||||    
T  9957088 agagtagtattatttgaacaactcttttagtacaatttttgtgacaaccttattattctttcttctaattggtcaataacaatg 9957171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 198 - 271
Target Start/End: Original strand, 40201018 - 40201090
Alignment:
Q  198 tatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||||||| | |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40201018 tatttgaacaattttttt-gtacaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 40201090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 186 - 271
Target Start/End: Original strand, 17574109 - 17574194
Alignment:
Q  186 aaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    |||||||| || ||||||||||||| |||| || ||||||||| |||||||||||| ||||||||||||| ||||||| |||||||    
T  17574109 aaagagtaatgatatttgaacaactattttggtacaacttttgggacaaccttgttgttctttcttctcactggtcaaaaacaatg 17574194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 271
Target Start/End: Original strand, 20985417 - 20985499
Alignment:
Q  188 agagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||||||||||||||||| | ||||||| |||||||| ||| || ||||||||| ||||||||||||||||||||| ||||    
T  20985417 agagtagtgttatttgaacaatt-ttttagtacaacttttatgataatcttgttattttttcttctcattggtcaataataatg 20985499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 198 - 271
Target Start/End: Original strand, 12612914 - 12612987
Alignment:
Q  198 tatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||||||||  |||| || ||||||||| |||||||||||| |||| |||||||||||||||| |||||||    
T  12612914 tatttgaacaaccattttggtacaacttttgggacaaccttgttgttctctcttctcattggtcaaaaacaatg 12612987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 38920020 - 38919955
Alignment:
Q  198 tatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaa 263  Q
    |||||||||||||||||| || ||||||||  |||||||||||| |||| ||||||||||||||||    
T  38920020 tatttgaacaactcttttggtacaacttttaggacaaccttgttgttctctcttctcattggtcaa 38919955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 270
Target Start/End: Original strand, 37821027 - 37821110
Alignment:
Q  187 aagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||||||||| ||||||||||||| |||| || ||||||||| |||||||||||| |  | |||||| ||||||||| ||||||    
T  37821027 aagagtagtgatatttgaacaactattttggtacaacttttgggacaaccttgttgtgttctcttcttattggtcaaaaacaat 37821110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 198 - 260
Target Start/End: Complemental strand, 12203319 - 12203257
Alignment:
Q  198 tatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggt 260  Q
    |||||||||||||||||| || ||||||||||||||| |||||| | || |||||||||||||    
T  12203319 tatttgaacaactcttttggtacaacttttgtgacaatcttgttgtcctctcttctcattggt 12203257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 35616689 - 35616770
Alignment:
Q  189 gagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||||||| ||||||||||||| |||| ||  || ||||| |||||||||||| |||| |||||| ||||||||| ||||||    
T  35616689 gagtagtgatatttgaacaactattttggtataaattttgggacaaccttgttgttctctcttcttattggtcaaaaacaat 35616770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 20496682 - 20496717
Alignment:
Q  18 agaacaagacttatagaaaggacattgggttaaagc 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  20496682 agaacaagacttatagaaaggacattgggttaaagc 20496717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 241
Target Start/End: Original strand, 21771358 - 21771413
Alignment:
Q  186 aaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgtt 241  Q
    ||||||||||| |||||||||||||||||| ||  |||||||| ||||||||||||    
T  21771358 aaagagtagtgatatttgaacaactcttttggtataacttttgggacaaccttgtt 21771413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 270
Target Start/End: Original strand, 18729164 - 18729246
Alignment:
Q  188 agagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    ||||||||  |||||||||||||||||| || ||||||||| |||||||||||| |  | |||| | ||||||||| ||||||    
T  18729164 agagtagtaatatttgaacaactcttttggtacaacttttgggacaaccttgttgtgttctctttttattggtcaaaaacaat 18729246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 39032492 - 39032573
Alignment:
Q  189 gagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||||||| ||||||||||||||||||  | ||| ||||| |||||||||||| |  | |||||| ||||||||| ||||||    
T  39032492 gagtagtgatatttgaacaactcttttgatacaatttttgggacaaccttgttgtgttctcttcttattggtcaaaaacaat 39032573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 198 - 271
Target Start/End: Original strand, 43152957 - 43153030
Alignment:
Q  198 tatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||||||||| |||| || ||||| ||  |||||| ||||| |||| |||||||||||||||| |||||||    
T  43152957 tatttgaacaactattttggtacaactcttaggacaactttgttgttctctcttctcattggtcaaaaacaatg 43153030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 271
Target Start/End: Complemental strand, 28501778 - 28501718
Alignment:
Q  212 ttttagtg-caacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    |||||||| ||||||| |||||||||||||| |||| |||||| ||||||||| |||||||    
T  28501778 ttttagtgacaactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 28501718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 222 - 269
Target Start/End: Complemental strand, 5043075 - 5043028
Alignment:
Q  222 acttttgtgacaaccttgttattctttcttctcattggtcaataacaa 269  Q
    ||||||| |||||||||||| |||| |||||||||||||||| |||||    
T  5043075 acttttgggacaaccttgttgttctctcttctcattggtcaaaaacaa 5043028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 220 - 271
Target Start/End: Complemental strand, 15622196 - 15622145
Alignment:
Q  220 caacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||| |||||||||||||| |||| |||||| ||||||||| |||||||    
T  15622196 caactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 15622145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 220 - 271
Target Start/End: Original strand, 33823613 - 33823664
Alignment:
Q  220 caacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||| |||||||||||||| |||| |||||| ||||||||| |||||||    
T  33823613 caactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 33823664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 271
Target Start/End: Complemental strand, 3518366 - 3518284
Alignment:
Q  189 gagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    |||||||| |||||  |||||  |||| || |||| |||| |||||| ||||| |||| |||||||||||||||| |||||||    
T  3518366 gagtagtgatattttgacaaccattttggtacaacctttgagacaactttgttgttctctcttctcattggtcaaaaacaatg 3518284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 342 - 372
Target Start/End: Original strand, 34693257 - 34693287
Alignment:
Q  342 tacaaaaatgattgtacaaatatcatttctc 372  Q
    |||||||||||||||||||||||||||||||    
T  34693257 tacaaaaatgattgtacaaatatcatttctc 34693287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Complemental strand, 3031867 - 3031834
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  3031867 ttgtacaaaaatggttgtacaaatatcatttctc 3031834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Complemental strand, 8442203 - 8442170
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    |||||||||||| |||||||||||||||||||||    
T  8442203 ttgtacaaaaataattgtacaaatatcatttctc 8442170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Complemental strand, 12203191 - 12203158
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  12203191 ttgtacaaaaatggttgtacaaatatcatttctc 12203158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 14126597 - 14126516
Alignment:
Q  189 gagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||||||| |||||||||||||||||| ||  | |||||| |||||||||| | |  | |||||| ||||||||| ||||||    
T  14126597 gagtagtgatatttgaacaactcttttggtagagcttttgggacaaccttgatgtgttctcttcttattggtcaaaaacaat 14126516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Original strand, 14523002 - 14523035
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  14523002 ttgtacaaaaatggttgtacaaatatcatttctc 14523035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Original strand, 18729327 - 18729360
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  18729327 ttgtacaaaaatggttgtacaaatatcatttctc 18729360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Original strand, 25585494 - 25585527
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  25585494 ttgtacaaaaatggttgtacaaatatcatttctc 25585527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 342 - 371
Target Start/End: Original strand, 30103492 - 30103521
Alignment:
Q  342 tacaaaaatgattgtacaaatatcatttct 371  Q
    ||||||||||||||||||||||||||||||    
T  30103492 tacaaaaatgattgtacaaatatcatttct 30103521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Original strand, 32732145 - 32732178
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    |||||||||||||||||||||||||| |||||||    
T  32732145 ttgtacaaaaatgattgtacaaatataatttctc 32732178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 271
Target Start/End: Complemental strand, 33893760 - 33893687
Alignment:
Q  198 tatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||||||| | ||||| | ||||||||| |||||||||||| | || |||| ||||| ||||| |||||||    
T  33893760 tatttgaacaatttttttactacaacttttgggacaaccttgttgtgctatcttttcatttgtcaaaaacaatg 33893687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Complemental strand, 38387643 - 38387610
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  38387643 ttgtacaaaaatggttgtacaaatatcatttctc 38387610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Original strand, 39032642 - 39032675
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  39032642 ttgtacaaaaatggttgtacaaatatcatttctc 39032675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 339 - 367
Target Start/End: Complemental strand, 7080574 - 7080546
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcat 367  Q
    |||||||||||||||||||||||||||||    
T  7080574 ttgtacaaaaatgattgtacaaatatcat 7080546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 5e-38; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 187 - 271
Target Start/End: Original strand, 2935397 - 2935481
Alignment:
Q  187 aagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2935397 aagagtagtgttatttgaacaactcttttagtacaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 2935481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 189 - 271
Target Start/End: Original strand, 49361725 - 49361807
Alignment:
Q  189 gagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  49361725 gagtagtgttatttgaacaactcttttagtacaacttttgtgacaactttgttattctttcttctcattggtcaataacaatg 49361807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 189 - 271
Target Start/End: Complemental strand, 48205228 - 48205146
Alignment:
Q  189 gagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  48205228 gagtagtgttatttgaacaactcttttagtacaacttttgtgacaaccttgttattttttcttctcattgatcaataacaatg 48205146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 189 - 271
Target Start/End: Original strand, 48490401 - 48490483
Alignment:
Q  189 gagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    |||||||||||||||||||||||||||| | ||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  48490401 gagtagtgttatttgaacaactcttttaatacaacttttgtgacaatcttgttattttttcttctcattggtcaataacaatg 48490483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 186 - 271
Target Start/End: Complemental strand, 9027799 - 9027714
Alignment:
Q  186 aaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    |||||||| || ||||||||||||| |||| || |||||||||  ||||||||||| |||| |||||| ||||||||| |||||||    
T  9027799 aaagagtaatgatatttgaacaactattttggtacaacttttggtacaaccttgttgttctctcttcttattggtcaaaaacaatg 9027714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 198 - 271
Target Start/End: Original strand, 51385337 - 51385410
Alignment:
Q  198 tatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||||||||| ||||||| ||||||||| ||||||| |||| |||| |||| ||||||||||| |||||||    
T  51385337 tatttgaacaactattttagtacaacttttgggacaaccatgttgttctctcttttcattggtcaaaaacaatg 51385410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 189 - 271
Target Start/End: Complemental strand, 33972066 - 33971984
Alignment:
Q  189 gagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||| || ||||||||||||| |||| || ||| ||||| |||||||||||| |||| ||||||||||||| || |||||||    
T  33972066 gagtaatgatatttgaacaactattttggtacaatttttgagacaaccttgttgttctctcttctcattggttaaaaacaatg 33971984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 189 - 271
Target Start/End: Original strand, 43149231 - 43149313
Alignment:
Q  189 gagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||| || ||||||||||||| |||| || |||||||||  ||||||||||| |||| |||||| ||||||||| |||||||    
T  43149231 gagtaatgatatttgaacaactattttggtacaacttttggtacaaccttgttgttctctcttcttattggtcaaaaacaatg 43149313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 29555729 - 29555810
Alignment:
Q  189 gagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||||||| |||||||||||||||||| || ||||||||| |||||||||||| |  | |||||| ||| ||||| ||||||    
T  29555729 gagtagtgatatttgaacaactcttttggtacaacttttgggacaaccttgttgtgttctcttcttattagtcaaaaacaat 29555810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 263
Target Start/End: Original strand, 43220027 - 43220104
Alignment:
Q  186 aaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaa 263  Q
    ||||||||||| ||||||||||||| |||||||  |||||||| |||||  ||||| |||| | ||||||||||||||    
T  43220027 aaagagtagtgatatttgaacaacttttttagtataacttttgggacaattttgttgttctctattctcattggtcaa 43220104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 187 - 271
Target Start/End: Complemental strand, 48117521 - 48117437
Alignment:
Q  187 aagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||| || ||||||||||||| ||||  | ||||||||| |||||||||||| | || |||| ||||||||||| |||||||    
T  48117521 aagagtaatgatatttgaacaacttttttgctacaacttttgggacaaccttgttgtgctctcttttcattggtcaaaaacaatg 48117437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 270
Target Start/End: Original strand, 14838931 - 14839014
Alignment:
Q  187 aagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||||||||| |||||||||||||||||| || ||| ||||| |||||||||||| |  | |||| | ||||||||| ||||||    
T  14838931 aagagtagtgatatttgaacaactcttttggtacaatttttgggacaaccttgttgtgttctctttttattggtcaaaaacaat 14839014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 339 - 372
Target Start/End: Complemental strand, 30664536 - 30664503
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||||||||||||||||||||||||    
T  30664536 ttgtacaaaaatgattgtacaaatatcatttctc 30664503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 270
Target Start/End: Complemental strand, 44689990 - 44689905
Alignment:
Q  185 taaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||||||||||| ||||||||||| |||||| |  ||||||||| |||||||||||| |  | |||| | ||||||||| ||||||    
T  44689990 taaagagtagtgatatttgaacaattcttttggaacaacttttgggacaaccttgttgtgttctctttttattggtcaaaaacaat 44689905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 339 - 372
Target Start/End: Original strand, 49361862 - 49361895
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||||||||||||||||||||||||    
T  49361862 ttgtacaaaaatgattgtacaaatatcatttctc 49361895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 339 - 372
Target Start/End: Complemental strand, 50745593 - 50745560
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||||||||||||||||||||||||    
T  50745593 ttgtacaaaaatgattgtacaaatatcatttctc 50745560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 220 - 271
Target Start/End: Complemental strand, 13159813 - 13159762
Alignment:
Q  220 caacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||| |||||||||||||| |||| |||||| ||||||||| |||||||    
T  13159813 caactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 13159762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 220 - 271
Target Start/End: Original strand, 32931837 - 32931888
Alignment:
Q  220 caacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||| |||||||||||||| |||| |||||| ||||||||| |||||||    
T  32931837 caactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 32931888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 220 - 271
Target Start/End: Complemental strand, 36819108 - 36819057
Alignment:
Q  220 caacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||| |||||||||||||| |||| |||||| ||||||||| |||||||    
T  36819108 caactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 36819057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 186 - 241
Target Start/End: Original strand, 40821745 - 40821800
Alignment:
Q  186 aaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgtt 241  Q
    |||||||| || ||||||||||||| ||||| | ||||||||| ||||||||||||    
T  40821745 aaagagtaatgatatttgaacaacttttttactacaacttttgggacaaccttgtt 40821800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 220 - 271
Target Start/End: Original strand, 54233420 - 54233471
Alignment:
Q  220 caacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||| |||||||||||||| |||| |||||| ||||||||| |||||||    
T  54233420 caactttggtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 54233471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 9158936 - 9159006
Alignment:
Q  201 ttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    |||||||||| ||||  | ||||||||| |||||||||||| | || |||| ||||||||||| |||||||    
T  9158936 ttgaacaacttttttgctacaacttttgggacaaccttgttgtgctctcttttcattggtcaaaaacaatg 9159006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 29533913 - 29533863
Alignment:
Q  220 caacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    ||||||||| |||||| ||||| |||| |||||||||||||||| ||||||    
T  29533913 caacttttgagacaactttgttgttctctcttctcattggtcaaaaacaat 29533863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 342 - 372
Target Start/End: Complemental strand, 48205075 - 48205045
Alignment:
Q  342 tacaaaaatgattgtacaaatatcatttctc 372  Q
    |||||||||||||||||||||||||||||||    
T  48205075 tacaaaaatgattgtacaaatatcatttctc 48205045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 271
Target Start/End: Complemental strand, 2280363 - 2280278
Alignment:
Q  186 aaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||||||| |||||  |||||  |||| || |||  |||| |||||| ||||| |||| |||||||||||||||| |||||||    
T  2280363 aaagagtagtgatattttgacaaccattttggtacaatctttgagacaactttgttgttctctcttctcattggtcaaaaacaatg 2280278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Original strand, 9159074 - 9159107
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  9159074 ttgtacaaaaatggttgtacaaatatcatttctc 9159107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Original strand, 14839083 - 14839116
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  14839083 ttgtacaaaaatggttgtacaaatatcatttctc 14839116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Complemental strand, 29057692 - 29057659
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  29057692 ttgtacaaaaatggttgtacaaatatcatttctc 29057659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Original strand, 29846918 - 29846951
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  29846918 ttgtacaaaaatggttgtacaaatatcatttctc 29846951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 270
Target Start/End: Complemental strand, 21481949 - 21481866
Alignment:
Q  186 aaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||||| |||| ||||||||||||   |||| | ||||||||| ||||||||  || |||| |||||||||||||||| ||||||    
T  21481949 aaagaggagtgatatttgaacaacctattta-tacaacttttgagacaacctcattgttctctcttctcattggtcaaaaacaat 21481866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 271
Target Start/End: Original strand, 29846777 - 29846861
Alignment:
Q  187 aagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||| || ||||||||||||| ||||  | ||||||||| |||||||||||| | || |||| || ||||| || |||||||    
T  29846777 aagagtaatgatatttgaacaacttttttgctacaacttttgggacaaccttgttgtgctctcttttcgttggtaaaaaacaatg 29846861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 339 - 371
Target Start/End: Complemental strand, 44689825 - 44689793
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttct 371  Q
    ||||||||||||| |||||||||||||||||||    
T  44689825 ttgtacaaaaatggttgtacaaatatcatttct 44689793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 2e-37; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 183 - 270
Target Start/End: Complemental strand, 1100406 - 1100319
Alignment:
Q  183 tataaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1100406 tataaggagtagtgttatttgaacaactcttttagtacaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 1100319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 189 - 266
Target Start/End: Complemental strand, 836054 - 835977
Alignment:
Q  189 gagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataa 266  Q
    ||||||||||||||||||||||||||| || ||||||||| ||||| ||||||||| | |||||||||||||||||||    
T  836054 gagtagtgttatttgaacaactcttttggtacaacttttgggacaatcttgttattttctcttctcattggtcaataa 835977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 270
Target Start/End: Original strand, 41564763 - 41564849
Alignment:
Q  184 ataaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    ||||||||||||| |||||||||||||||||| || ||| ||||| |||||||||||| |  | |||||| ||||||||| ||||||    
T  41564763 ataaagagtagtgatatttgaacaactcttttggtacaatttttgggacaaccttgttgtgttctcttcttattggtcaaaaacaat 41564849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 266
Target Start/End: Complemental strand, 50796185 - 50796108
Alignment:
Q  188 agagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataa 266  Q
    |||||||||||||||||||||||||||| || |||| |||| |||||||||| |||||| | || ||||||||||||||    
T  50796185 agagtagtgttatttgaacaactctttttgtacaacatttgggacaaccttgatattctct-ttttcattggtcaataa 50796108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 198 - 271
Target Start/End: Original strand, 37947117 - 37947190
Alignment:
Q  198 tatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||||||||| ||||  | ||||||||| |||||||||||| |||| |||||||||||||||| |||||||    
T  37947117 tatttgaacaactattttgttacaacttttgggacaaccttgttgttctctcttctcattggtcaaaaacaatg 37947190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 270
Target Start/End: Complemental strand, 27954413 - 27954330
Alignment:
Q  187 aagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||||||||| ||||||||||| ||||||||  ||| |||||  ||||| ||||| |||| |||||||||||||||| ||||||    
T  27954413 aagagtagtgatatttgaacaattcttttagcacaatttttggaacaactttgttgttctctcttctcattggtcaaaaacaat 27954330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 270
Target Start/End: Complemental strand, 46903663 - 46903572
Alignment:
Q  179 attgtataaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||||| ||||||||||| ||||| ||||||  |||| || |||| |||| |||||| ||||| |||| |||||||||||||||| ||||||    
T  46903663 attgtaaaaagagtagtgatattttaacaaccattttggtacaacctttgagacaactttgttgttctctcttctcattggtcaaaaacaat 46903572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 271
Target Start/End: Original strand, 8577399 - 8577472
Alignment:
Q  198 tatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||||||||| |||| ||  |||||||| |||||||||||| |||| | |||||||||||||| |||||||    
T  8577399 tatttgaacaactattttggtataacttttgggacaaccttgttgttctctattctcattggtcaaaaacaatg 8577472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 271
Target Start/End: Original strand, 31244632 - 31244705
Alignment:
Q  198 tatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||||||||| |||| || |||| |||| ||||||| |||| |||| |||||||||||||||| |||||||    
T  31244632 tatttgaacaactattttggtacaacatttgggacaaccatgttgttctctcttctcattggtcaaaaacaatg 31244705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 187 - 263
Target Start/End: Complemental strand, 11897359 - 11897283
Alignment:
Q  187 aagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaa 263  Q
    ||||||| || ||||||||||||||||||  | ||| |||||||||||||||| ||||||  ||||| |||||||||    
T  11897359 aagagtaatgatatttgaacaactcttttgttacaatttttgtgacaaccttgatattctcccttcttattggtcaa 11897283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 271
Target Start/End: Original strand, 29489278 - 29489329
Alignment:
Q  220 caacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||| |||||||||||||| ||||||||||| ||||||||| |||||||    
T  29489278 caactttagtgacaaccttgtttttctttcttcttattggtcaaaaacaatg 29489329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 270
Target Start/End: Original strand, 23399876 - 23399958
Alignment:
Q  188 agagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    ||||||||| ||||| |||||||||||| || ||| ||||| |||||||||||| |  | |||||| ||||||||| ||||||    
T  23399876 agagtagtgatatttaaacaactcttttggtacaatttttgggacaaccttgttgtgttctcttcttattggtcaaaaacaat 23399958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 48962170 - 48962088
Alignment:
Q  188 agagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||||| || |||||||||||||||||| || ||| ||||| |||||||||||| |  | |||||| ||||||||| ||||||    
T  48962170 agagtattgatatttgaacaactcttttggtacaatttttgggacaaccttgttgtgttctcttcttattggtcaaaaacaat 48962088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 198 - 271
Target Start/End: Original strand, 40240008 - 40240081
Alignment:
Q  198 tatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||||||||| ||||  | ||||||||| |||||||||||| | || |||| ||||||||||| |||||||    
T  40240008 tatttgaacaacttttttgctacaacttttgggacaaccttgttgtgctatcttttcattggtcaaaaacaatg 40240081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 339 - 371
Target Start/End: Original strand, 5574297 - 5574329
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttct 371  Q
    |||||||||||||||||||||||||||||||||    
T  5574297 ttgtacaaaaatgattgtacaaatatcatttct 5574329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 241
Target Start/End: Original strand, 12990373 - 12990425
Alignment:
Q  189 gagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgtt 241  Q
    |||||||| ||||||||||||||||||  | ||||||||| ||||||||||||    
T  12990373 gagtagtgatatttgaacaactcttttgatacaacttttgggacaaccttgtt 12990425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 220 - 271
Target Start/End: Complemental strand, 13813710 - 13813659
Alignment:
Q  220 caacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||| |||||||||||||| |||| |||||| ||||||||| |||||||    
T  13813710 caactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 13813659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 220 - 271
Target Start/End: Complemental strand, 25130855 - 25130804
Alignment:
Q  220 caacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||| |||||||||||||| |||| |||||| ||||||||| |||||||    
T  25130855 caactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 25130804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 260
Target Start/End: Complemental strand, 11121654 - 11121592
Alignment:
Q  198 tatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggt 260  Q
    ||||||||||||| |||| ||  |||||||||||||| |||||| || | |||||||||||||    
T  11121654 tatttgaacaactattttggtataacttttgtgacaatcttgttgttgtctcttctcattggt 11121592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 342 - 372
Target Start/End: Original strand, 40118756 - 40118786
Alignment:
Q  342 tacaaaaatgattgtacaaatatcatttctc 372  Q
    |||||||||||||||||||||||||||||||    
T  40118756 tacaaaaatgattgtacaaatatcatttctc 40118786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Complemental strand, 1100250 - 1100217
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  1100250 ttgtacaaaaatggttgtacaaatatcatttctc 1100217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Original strand, 12990507 - 12990540
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  12990507 ttgtacaaaaatggttgtacaaatatcatttctc 12990540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Original strand, 16252786 - 16252819
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  16252786 ttgtacaaaaatggttgtacaaatatcatttctc 16252819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Complemental strand, 27954276 - 27954243
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||||||||| ||||||||||||||    
T  27954276 ttgtacaaaaatgattgtataaatatcatttctc 27954243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Original strand, 28457385 - 28457418
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    |||||| |||||||||||||||||||||||||||    
T  28457385 ttgtaccaaaatgattgtacaaatatcatttctc 28457418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 29638898 - 29638817
Alignment:
Q  189 gagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||||||| |||||||||||||||||| || ||| ||||| |||||  ||||| |  | |||||| ||||||||| ||||||    
T  29638898 gagtagtgatatttgaacaactcttttggtacaatttttgggacaattttgttgtgttctcttcttattggtcaaaaacaat 29638817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Complemental strand, 30414908 - 30414875
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  30414908 ttgtacaaaaatggttgtacaaatatcatttctc 30414875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Original strand, 31244771 - 31244804
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    |||||||||||||||| |||||||||||||||||    
T  31244771 ttgtacaaaaatgattatacaaatatcatttctc 31244804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Original strand, 41564918 - 41564951
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  41564918 ttgtacaaaaatggttgtacaaatatcatttctc 41564951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 263
Target Start/End: Complemental strand, 40053091 - 40053015
Alignment:
Q  187 aagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaa 263  Q
    |||||||||| ||||| ||||||| |||| || |||  |||| |||||| ||||| |||| |||| |||||||||||    
T  40053091 aagagtagtgatattttaacaactattttggtacaatctttgagacaactttgttgttctctcttttcattggtcaa 40053015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 339 - 371
Target Start/End: Original strand, 50460739 - 50460771
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttct 371  Q
    ||||||||||||| |||||||||||||||||||    
T  50460739 ttgtacaaaaatggttgtacaaatatcatttct 50460771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 1e-32; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 188 - 271
Target Start/End: Complemental strand, 3366215 - 3366132
Alignment:
Q  188 agagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3366215 agagtagtgttatttgaacaactcttttagtataacttttgtgacaaccttattattctttcttctcattggtcaataacaatg 3366132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 189 - 271
Target Start/End: Complemental strand, 37076836 - 37076754
Alignment:
Q  189 gagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  37076836 gagtaatgttatttgaacaactcttttagtacaatttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 37076754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 186 - 271
Target Start/End: Complemental strand, 9384561 - 9384476
Alignment:
Q  186 aaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  9384561 aaagagtagtgttatttgaacaactcttttaatacaacttttgtgacaatcttgttattctttcttcgcattggtcaataacaatg 9384476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 188 - 271
Target Start/End: Complemental strand, 12208626 - 12208543
Alignment:
Q  188 agagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||  |||||||||||| || |||||||||||||||||||    
T  12208626 agagtagtgttatttgaacaactcttttagtacaacttttgtaacaattttgttattcttttttttcattggtcaataacaatg 12208543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 190 - 269
Target Start/End: Complemental strand, 28264710 - 28264631
Alignment:
Q  190 agtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaa 269  Q
    ||||||||||||||||||||||||||||| ||||||||  ||||||||||||||| | ||||||||||| ||||||||||    
T  28264710 agtagtgttatttgaacaactcttttagtacaacttttaagacaaccttgttattatctcttctcattgttcaataacaa 28264631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 189 - 263
Target Start/End: Complemental strand, 23141537 - 23141463
Alignment:
Q  189 gagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaa 263  Q
    |||||||| |||||||||||||||||| || ||||||||| |||||||||||| |||| ||||||||||||||||    
T  23141537 gagtagtgatatttgaacaactcttttggtacaacttttgggacaaccttgttgttctctcttctcattggtcaa 23141463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 189 - 263
Target Start/End: Complemental strand, 23553327 - 23553253
Alignment:
Q  189 gagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaa 263  Q
    |||||||| |||||||||||||||||| || ||||||||| |||||||||||| |||| ||||||||||||||||    
T  23553327 gagtagtgatatttgaacaactcttttggtacaacttttgggacaaccttgttgttctctcttctcattggtcaa 23553253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 189 - 263
Target Start/End: Complemental strand, 30340177 - 30340103
Alignment:
Q  189 gagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaa 263  Q
    |||||||| |||||||||||||||||| || ||||||||| |||||||||||| |||| ||||||||||||||||    
T  30340177 gagtagtgatatttgaacaactcttttggtacaacttttgggacaaccttgttgttctctcttctcattggtcaa 30340103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 186 - 270
Target Start/End: Complemental strand, 1277917 - 1277833
Alignment:
Q  186 aaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||||||||| ||||||||||||||||||| ||  |||||||  ||||| |||| |||||| |||||||||||||||||||||||    
T  1277917 aaagagtagtattatttgaacaactctttttgtataacttttaggacaatcttgatattctctcttctcattggtcaataacaat 1277833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 256
Target Start/End: Complemental strand, 3681545 - 3681479
Alignment:
Q  190 agtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcat 256  Q
    |||||||||||||||||||||||||| || ||| ||||| |||||||||| |||||| |||||||||    
T  3681545 agtagtgttatttgaacaactctttttgtacaatttttgggacaaccttgatattctctcttctcat 3681479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 271
Target Start/End: Complemental strand, 8757728 - 8757645
Alignment:
Q  188 agagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    |||||| || ||||||||||||| |||| || |||||||||  ||||||||||| |||| |||||| ||||||||| |||||||    
T  8757728 agagtaatgatatttgaacaactattttggtacaacttttggtacaaccttgttgttctctcttcttattggtcaaaaacaatg 8757645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 246
Target Start/End: Complemental strand, 33569753 - 33569694
Alignment:
Q  187 aagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattct 246  Q
    ||||| ||||||||||||||||||||||| || ||||||||| |||||| ||||||||||    
T  33569753 aagagcagtgttatttgaacaactcttttggtacaacttttgagacaactttgttattct 33569694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 12257084 - 12257003
Alignment:
Q  189 gagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||||||| ||||||||||||| |||| || ||| ||||| |||||||||||| |  |||||||| ||||||||| ||||||    
T  12257084 gagtagtgatatttgaacaacttttttggtacaatttttgggacaaccttgttgtgttttcttcttattggtcaaaaacaat 12257003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 263
Target Start/End: Original strand, 35007986 - 35008063
Alignment:
Q  186 aaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaa 263  Q
    |||||||| || ||||||||||||| ||||| | ||||||||| |||||||||||| | || |||| |||||||||||    
T  35007986 aaagagtaatgatatttgaacaacttttttactacaacttttgggacaaccttgttgtgctctcttttcattggtcaa 35008063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 38598238 - 38598318
Alignment:
Q  189 gagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||||||| ||||||||||||| |||||||  ||||||||||||||||||||| |  | |||||| ||||||||| ||||||    
T  38598238 gagtagtgatatttgaacaact-ttttagtataacttttgtgacaaccttgttgtgttctcttcttattggtcaaaaacaat 38598318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 187 - 263
Target Start/End: Complemental strand, 37064243 - 37064167
Alignment:
Q  187 aagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaa 263  Q
    ||||||| || ||||||| |||||||||| || ||||||||| || ||||||||| || | ||||||||||||||||    
T  37064243 aagagtactgatatttgatcaactcttttggtacaacttttgggataaccttgttgttttctcttctcattggtcaa 37064167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 16463476 - 16463394
Alignment:
Q  188 agagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||||| || |||||||||||||||| | || ||||||||| ||||| |||||| | || |||||| ||||||||| ||||||    
T  16463476 agagtaatgatatttgaacaactcttatggtacaacttttgggacaatcttgttgtgctctcttcttattggtcaaaaacaat 16463394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 35518459 - 35518377
Alignment:
Q  188 agagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||||| || ||||||||||||| ||||  | ||||||||| |||||| ||||| |||| |||||| ||||||||| ||||||    
T  35518459 agagtaatgatatttgaacaactattttgatacaacttttgggacaactttgttgttctctcttcttattggtcaaaaacaat 35518377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 270
Target Start/End: Original strand, 38027502 - 38027584
Alignment:
Q  188 agagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    ||||||||| ||||| |||||||||||||||  ||||||||  ||||||||||| |  | |||||| ||||||||| ||||||    
T  38027502 agagtagtgatatttaaacaactcttttagtataacttttgaaacaaccttgttgtgttctcttcttattggtcaaaaacaat 38027584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 271
Target Start/End: Complemental strand, 43205276 - 43205194
Alignment:
Q  189 gagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||| |||||||||||||||| ||||  | ||||||||| |||||| ||||| | || |||| ||||||||||| |||||||    
T  43205276 gagtaatgttatttgaacaacttttttgctacaacttttgggacaactttgttgtgctctcttttcattggtcaaaaacaatg 43205194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 5852641 - 5852560
Alignment:
Q  189 gagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||||||| |||||||||||||||||| ||  |||||||| |||||||||||| |  | |||||| ||| ||||| ||||||    
T  5852641 gagtagtgatatttgaacaactcttttggtaaaacttttgggacaaccttgttgtgttctcttcttatttgtcaaaaacaat 5852560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 271
Target Start/End: Complemental strand, 13711246 - 13711162
Alignment:
Q  186 aaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||||||| ||||||||||||| |||| || |||||||||||||||| |  || |||| |||| |||||||| || |||||||    
T  13711246 aaagagtagtgatatttgaacaactatttt-gtacaacttttgtgacaacttcttttttctctcttttcattggttaaaaacaatg 13711162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 198 - 271
Target Start/End: Original strand, 27538829 - 27538902
Alignment:
Q  198 tatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||||||||| ||||  | ||||||| | |||||||||||| | ||||||| ||||||||||| |||||||    
T  27538829 tatttgaacaacttttttgctacaactttcgggacaaccttgttgtgctttcttttcattggtcaaaaacaatg 27538902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 241
Target Start/End: Complemental strand, 28679311 - 28679258
Alignment:
Q  188 agagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgtt 241  Q
    |||||| || |||||||||||||||||| || ||||||||| ||||||||||||    
T  28679311 agagtaatgatatttgaacaactcttttggtacaacttttgggacaaccttgtt 28679258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 339 - 372
Target Start/End: Complemental strand, 34141475 - 34141442
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||||||||||||||||||||||||    
T  34141475 ttgtacaaaaatgattgtacaaatatcatttctc 34141442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 34141626 - 34141545
Alignment:
Q  189 gagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||||||| |||||||||||||||||| || |||||||||  ||||| ||||| |  | |||||| ||||||||| ||||||    
T  34141626 gagtagtgatatttgaacaactcttttggtacaacttttggaacaactttgttgtgttctcttcttattggtcaaaaacaat 34141545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 271
Target Start/End: Original strand, 11828706 - 11828790
Alignment:
Q  187 aagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||| || ||||||||||||| ||||  | ||||||||  |||||||||||| | || |||| ||||||||||| |||||||    
T  11828706 aagagtaatgatatttgaacaacttttttgctacaacttttaggacaaccttgttgtgctctcttttcattggtcaaaaacaatg 11828790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 241
Target Start/End: Original strand, 26387719 - 26387771
Alignment:
Q  189 gagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgtt 241  Q
    |||||||| ||||||||||||||||||  | ||||||||| ||||||||||||    
T  26387719 gagtagtgatatttgaacaactcttttgatacaacttttgggacaaccttgtt 26387771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 271
Target Start/End: Complemental strand, 27529712 - 27529628
Alignment:
Q  187 aagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||| || |||||||||||||  |||  | ||||||| | |||||||||||| | ||||||| ||||||||||| |||||||    
T  27529712 aagagtaatgatatttgaacaacttctttgctacaactttcgggacaaccttgttgtgctttcttttcattggtcaaaaacaatg 27529628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 271
Target Start/End: Original strand, 35705803 - 35705887
Alignment:
Q  187 aagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||| || ||||||||||||| ||||  | ||||||||| ||||| |||||| | || |||| ||||||||||| |||||||    
T  35705803 aagagtaatgatatttgaacaacttttttgctacaacttttgggacaatcttgttgtgctctcttttcattggtcaaaaacaatg 35705887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 269
Target Start/End: Original strand, 38533086 - 38533166
Alignment:
Q  189 gagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaa 269  Q
    |||||||| |||||||| || |||||| || ||| ||||| |||||||||||| |||| | || ||||||||||| |||||    
T  38533086 gagtagtgatatttgaataattcttttggtacaatttttgggacaaccttgttgttctctattgtcattggtcaaaaacaa 38533166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 271
Target Start/End: Original strand, 45202018 - 45202102
Alignment:
Q  187 aagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||| || ||||||||||||| ||||  | ||||||||| |||||||||||| | || |||| |||||| |||| |||||||    
T  45202018 aagagtaatgatatttgaacaacttttttgctacaacttttgggacaaccttgttgtgctctcttttcattgatcaaaaacaatg 45202102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 220 - 271
Target Start/End: Original strand, 23048002 - 23048053
Alignment:
Q  220 caacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||| |||||||||||||| |||| |||||| ||||||||| |||||||    
T  23048002 caactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 23048053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 220 - 271
Target Start/End: Complemental strand, 36383614 - 36383563
Alignment:
Q  220 caacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||| |||||||||||||| |||| |||||| ||||||||| |||||||    
T  36383614 caactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 36383563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 220 - 271
Target Start/End: Complemental strand, 37966508 - 37966457
Alignment:
Q  220 caacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||| |||||||||||||| |||| |||||| ||||||||| |||||||    
T  37966508 caactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 37966457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 271
Target Start/End: Complemental strand, 3091927 - 3091842
Alignment:
Q  185 taaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    |||||||||||| ||||||||||| | ||| | | |||||||||||||||| |  || |||| |||| ||||||||||| |||||||    
T  3091927 taaagagtagtgatatttgaacaattatttga-tacaacttttgtgacaacttcttttttctctcttttcattggtcaaaaacaatg 3091842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 342 - 372
Target Start/End: Complemental strand, 12256931 - 12256901
Alignment:
Q  342 tacaaaaatgattgtacaaatatcatttctc 372  Q
    |||||||||||||||||||||||||||||||    
T  12256931 tacaaaaatgattgtacaaatatcatttctc 12256901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 339 - 369
Target Start/End: Complemental strand, 28679161 - 28679131
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcattt 369  Q
    |||||||||||||||||||||||||||||||    
T  28679161 ttgtacaaaaatgattgtacaaatatcattt 28679131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 271
Target Start/End: Complemental strand, 36133160 - 36133075
Alignment:
Q  185 taaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    |||||||||||| ||||||||||||| ||| | | |||||||||||||||| |  || |||| |||| |||||||| || |||||||    
T  36133160 taaagagtagtgatatttgaacaactatttca-tacaacttttgtgacaacttcttttttctctcttttcattggttaagaacaatg 36133075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 270
Target Start/End: Complemental strand, 40721959 - 40721873
Alignment:
Q  184 ataaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    ||||||||||||| |||||  |||||  |||| || |||| |||| |||||| ||||| |||| ||||||||||||| || ||||||    
T  40721959 ataaagagtagtgatattttgacaaccattttggtacaacctttgagacaactttgttgttctctcttctcattggttaaaaacaat 40721873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Complemental strand, 5852507 - 5852474
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  5852507 ttgtacaaaaatggttgtacaaatatcatttctc 5852474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Complemental strand, 12208475 - 12208442
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  12208475 ttgtacaaaaatggttgtacaaatatcatttctc 12208442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Complemental strand, 13881139 - 13881106
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||||||||||||| ||||||||||    
T  13881139 ttgtacaaaaatgattgtacaaacatcatttctc 13881106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Complemental strand, 14021264 - 14021231
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||||||||||||| ||||||||||    
T  14021264 ttgtacaaaaatgattgtacaaacatcatttctc 14021231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Original strand, 22296156 - 22296189
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  22296156 ttgtacaaaaatggttgtacaaatatcatttctc 22296189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Original strand, 27329136 - 27329169
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    |||||| |||||||||||||||||||||||||||    
T  27329136 ttgtaccaaaatgattgtacaaatatcatttctc 27329169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Original strand, 27538943 - 27538976
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  27538943 ttgtacaaaaatggttgtacaaatatcatttctc 27538976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Complemental strand, 30340026 - 30339993
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  30340026 ttgtacaaaaatggttgtacaaatatcatttctc 30339993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 271
Target Start/End: Original strand, 35203634 - 35203719
Alignment:
Q  186 aaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    |||||||| || ||||||||||| | ||||  | ||| ||||| |||||||||||| | || |||| ||||||||||| |||||||    
T  35203634 aaagagtaatgatatttgaacaatttttttgctacaatttttgggacaaccttgttgtgctatcttttcattggtcaaaaacaatg 35203719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 270
Target Start/End: Original strand, 43791676 - 43791760
Alignment:
Q  186 aaagagtagtgttatttgaacaactcttttagtg-caacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||||||| || |||||||||||| ||||||||| ||||||||||||||||||   | |||| |||| | ||||||||| ||||||    
T  43791676 aaagagtaatgatatttgaacaac-cttttagtgacaacttttgtgacaacctaccttttctctctttttattggtcaaaaacaat 43791760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Original strand, 43820779 - 43820812
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||| ||||||||||||||||||||||||||||    
T  43820779 ttgtaaaaaaatgattgtacaaatatcatttctc 43820812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Complemental strand, 44897659 - 44897626
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  44897659 ttgtacaaaaatggttgtacaaatatcatttctc 44897626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 270
Target Start/End: Original strand, 24491562 - 24491646
Alignment:
Q  186 aaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||||| |||| ||||||||||| ||||||  | ||||||||| ||||| ||| || |||| |||||| |||||| || ||||||    
T  24491562 aaagagcagtgatatttgaacaattcttttgatacaacttttgagacaatcttattgttctctcttcttattggttaaaaacaat 24491646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 271
Target Start/End: Complemental strand, 40115700 - 40115616
Alignment:
Q  187 aagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||| || ||||||||||||| ||||| | ||| ||||| |||||||||||| | || |||| |||||  |||| |||||||    
T  40115700 aagagtaatgatatttgaacaacttttttactacaatttttgggacaaccttgttgtgctctcttttcattcatcaaaaacaatg 40115616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 4e-32; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 193 - 271
Target Start/End: Complemental strand, 25272770 - 25272692
Alignment:
Q  193 agtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25272770 agtgttatttgaacaactcttttagtacaacttttgtgacaaccttgttattctttcttcttattggtcaataacaatg 25272692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 189 - 271
Target Start/End: Original strand, 49142405 - 49142487
Alignment:
Q  189 gagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  49142405 gagtagtgttatttgaacaactcttttattacaacttttgtgacaaccttgttattttttcttctcattggtcaataacaatg 49142487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 195 - 271
Target Start/End: Complemental strand, 40108300 - 40108225
Alignment:
Q  195 tgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    |||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  40108300 tgttatttaaacaactcttttagtacaacttt-gtgacaaccttgttattctttcttctcattggtcaataataatg 40108225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 193 - 271
Target Start/End: Original strand, 33464930 - 33465007
Alignment:
Q  193 agtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    |||||||||||||||| ||| ||||| ||||||||||||||||||||||||| |||||| |||||| ||||||||||||    
T  33464930 agtgttatttgaacaa-tctcttagtacaacttttgtgacaaccttgttattttttcttttcattgatcaataacaatg 33465007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 23034201 - 23034282
Alignment:
Q  189 gagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||||||| |||||||||||||||||| || ||||||||| |||||||||||| | || | |||| ||||||||| ||||||    
T  23034201 gagtagtgatatttgaacaactcttttggtacaacttttgggacaaccttgttgtgctcttttcttattggtcaaaaacaat 23034282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 44185360 - 44185278
Alignment:
Q  188 agagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||| |||| ||||||||||||||||||  | ||||||||| ||||||||  || |||| |||||||||||||||| ||||||    
T  44185360 agaggagtgatatttgaacaactcttttgatacaacttttgagacaacctcattgttctctcttctcattggtcaaaaacaat 44185278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 185 - 263
Target Start/End: Complemental strand, 47945170 - 47945092
Alignment:
Q  185 taaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaa 263  Q
    |||||||||||| ||||||||||||||||||  | ||||||||| |||||||||||| |  | |||||| |||||||||    
T  47945170 taaagagtagtgatatttgaacaactcttttgatacaacttttgggacaaccttgttgtgttctcttcttattggtcaa 47945092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 185 - 263
Target Start/End: Complemental strand, 47950600 - 47950522
Alignment:
Q  185 taaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaa 263  Q
    |||||||||||| ||||||||||||||||||  | ||||||||| |||||||||||| |  | |||||| |||||||||    
T  47950600 taaagagtagtgatatttgaacaactcttttgatacaacttttgggacaaccttgttgtgttctcttcttattggtcaa 47950522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 24380609 - 24380690
Alignment:
Q  189 gagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||||||| |||||||||||||||||| || |||||||||  ||||||||||| |  | |||||| ||||||||| ||||||    
T  24380609 gagtagtgatatttgaacaactcttttggtacaacttttggaacaaccttgttgtgttctcttcttattggtcaaaaacaat 24380690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 186 - 270
Target Start/End: Complemental strand, 47379746 - 47379662
Alignment:
Q  186 aaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    ||||| ||||| |||||  |||||| |||| |||||||||||| |||||| ||||| |||| ||||||||||||| || ||||||    
T  47379746 aaagactagtgatattttgacaactattttggtgcaacttttgagacaactttgttgttctctcttctcattggttaaaaacaat 47379662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 7295619 - 7295569
Alignment:
Q  220 caacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||||||||  |||||||||||||||| |||||||||||||||| ||||||    
T  7295619 caacttttggaacaaccttgttattctctcttctcattggtcaaaaacaat 7295569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 263
Target Start/End: Complemental strand, 45336046 - 45335972
Alignment:
Q  189 gagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaa 263  Q
    |||||||| ||||||||| |||||||| || ||| ||||| |||||||||||| |||| |||| | |||||||||    
T  45336046 gagtagtgatatttgaactactcttttggtacaaattttgggacaaccttgttgttctctctttttattggtcaa 45335972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 12142066 - 12141986
Alignment:
Q  189 gagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||||||| ||||||||||||  ||| | | |||||||||||||||| || || ||||||||| ||||||||||| ||||||    
T  12142066 gagtagtgatatttgaacaaccatttga-tacaacttttgtgacaactttttttttctttcttttcattggtcaaaaacaat 12141986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 29923853 - 29923773
Alignment:
Q  189 gagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||||||| |||||||||||||||||| || ||||||||| |||||||||||| |  | | |||| ||||||||| ||||||    
T  29923853 gagtagtgatatttgaacaactcttttggtacaacttttg-gacaaccttgttgtgttcttttcttattggtcaaaaacaat 29923773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 339 - 372
Target Start/End: Original strand, 37848647 - 37848680
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||||||||||||||||||||||||    
T  37848647 ttgtacaaaaatgattgtacaaatatcatttctc 37848680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 37970116 - 37970035
Alignment:
Q  189 gagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||||||| ||||| ||||||  |||| || |||| |||| |||||| ||||| |||| |||||||||||||||| ||||||    
T  37970116 gagtagtgatattttaacaaccattttggtacaacatttgagacaactttgttgttctctcttctcattggtcaaaaacaat 37970035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 41910073 - 41910154
Alignment:
Q  189 gagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||||||| ||||||||||| |||||| || ||||||||  |||||||||||| |  | |||||| ||||||||| ||||||    
T  41910073 gagtagtgatatttgaacaattcttttggtacaacttttaggacaaccttgttgtgttctcttcttattggtcaaaaacaat 41910154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 48639273 - 48639354
Alignment:
Q  189 gagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||||||| |||||||||||||||||| || |||||||||  ||||||||||| |  | |||||  ||||||||| ||||||    
T  48639273 gagtagtgatatttgaacaactcttttggtacaacttttggaacaaccttgttgtgttctcttcgtattggtcaaaaacaat 48639354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 271
Target Start/End: Original strand, 2600420 - 2600504
Alignment:
Q  187 aagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    |||||||||| |||||  |||||  |||| || |||| |||| |||||| ||||| |||| |||||||||||||||| |||||||    
T  2600420 aagagtagtgatattttgacaaccattttggtacaacctttgagacaactttgttgttctctcttctcattggtcaaaaacaatg 2600504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 271
Target Start/End: Original strand, 22331097 - 22331181
Alignment:
Q  187 aagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||| |||||||||||||| | ||||  | ||| ||||| |||||||||||||| || |||| |||||||| || |||||||    
T  22331097 aagagtaatgttatttgaacaatttttttgctacaatttttgggacaaccttgttatgctctcttttcattggtaaaaaacaatg 22331181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 270
Target Start/End: Complemental strand, 32316000 - 32315928
Alignment:
Q  198 tatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    ||||||||||||| ||| |   |||||||||||||||| ||||| |||| |||||| ||||||||| ||||||    
T  32316000 tatttgaacaactatttgacgacaacttttgtgacaacattgtttttctctcttcttattggtcaaaaacaat 32315928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 270
Target Start/End: Complemental strand, 41538662 - 41538582
Alignment:
Q  190 agtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    ||||||| ||||||||||| ||||||  | ||||||||| |||||||||||| |  | |||||| ||||||||| ||||||    
T  41538662 agtagtgatatttgaacaattcttttgatacaacttttgggacaaccttgttgtgttatcttcttattggtcaaaaacaat 41538582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 220 - 271
Target Start/End: Complemental strand, 42431875 - 42431824
Alignment:
Q  220 caacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||| |||||||||||||| |||| |||||| ||||||||| |||||||    
T  42431875 caactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 42431824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 37149394 - 37149444
Alignment:
Q  220 caacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||||||| ||||||||||||| ||||||||||| |||||| || ||||||    
T  37149394 caacttttatgacaaccttgtttttctttcttcttattggtaaaaaacaat 37149444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Complemental strand, 1709317 - 1709284
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||||||||||| ||||||||||||    
T  1709317 ttgtacaaaaatgattgtacagatatcatttctc 1709284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Complemental strand, 25272635 - 25272602
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  25272635 ttgtacaaaaatggttgtacaaatatcatttctc 25272602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 27704614 - 27704537
Alignment:
Q  193 agtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||| ||||||||||||||||||  | ||||||||| |||||| ||||| |  | |||||| ||||||||| ||||||    
T  27704614 agtgatatttgaacaactcttttgttacaacttttgggacaactttgttgtgttctcttcttattggtcaaaaacaat 27704537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Original strand, 27866564 - 27866597
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  27866564 ttgtacaaaaatggttgtacaaatatcatttctc 27866597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Original strand, 33465066 - 33465099
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  33465066 ttgtacaaaaatggttgtacaaatatcatttctc 33465099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 271
Target Start/End: Complemental strand, 38197835 - 38197762
Alignment:
Q  198 tatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||||||||| ||||  | ||||||||| ||||| |||||| | || |||| ||||||||||| |||||||    
T  38197835 tatttgaacaacttttttgctacaacttttgggacaatcttgttgtgctatcttttcattggtcaaaaacaatg 38197762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Complemental strand, 41538515 - 41538482
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  41538515 ttgtacaaaaatggttgtacaaatatcatttctc 41538482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Complemental strand, 42552932 - 42552899
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||| ||||||||||||||||||||||||||||    
T  42552932 ttgtataaaaatgattgtacaaatatcatttctc 42552899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Complemental strand, 48522189 - 48522156
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  48522189 ttgtacaaaaatggttgtacaaatatcatttctc 48522156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Original strand, 48639421 - 48639454
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  48639421 ttgtacaaaaatggttgtacaaatatcatttctc 48639454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 339 - 371
Target Start/End: Original strand, 23034351 - 23034383
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttct 371  Q
    ||||||||||||| |||||||||||||||||||    
T  23034351 ttgtacaaaaatggttgtacaaatatcatttct 23034383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 339 - 371
Target Start/End: Original strand, 34349065 - 34349097
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttct 371  Q
    ||||||||||||| |||||||||||||||||||    
T  34349065 ttgtacaaaaatggttgtacaaatatcatttct 34349097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 2e-22; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 189 - 271
Target Start/End: Complemental strand, 34641736 - 34641654
Alignment:
Q  189 gagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    |||||||||||||| ||||||| ||||||| ||| |||| |||||| ||||||||||||||||| ||||||||||||||||||    
T  34641736 gagtagtgttatttaaacaacttttttagtacaatttttatgacaatcttgttattctttcttcccattggtcaataacaatg 34641654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 183 - 270
Target Start/End: Complemental strand, 42651109 - 42651022
Alignment:
Q  183 tataaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||||||| || || ||||||||||||| |||| || ||||||||| |||||||||||| |||| ||||||||||||| || ||||||    
T  42651109 tataaagaataatgatatttgaacaactattttggtacaacttttgagacaaccttgttgttctctcttctcattggttaaaaacaat 42651022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 25430830 - 25430748
Alignment:
Q  188 agagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    ||||||||| |||||||||||||||||| || ||||||||| |||||||||||| |  | |||||| ||||||||| ||||||    
T  25430830 agagtagtgatatttgaacaactcttttggtacaacttttgggacaaccttgttgtgttctcttcttattggtcaaaaacaat 25430748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 186 - 270
Target Start/End: Complemental strand, 23709162 - 23709078
Alignment:
Q  186 aaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||||||| |||||||||||||||| ||||  | ||| ||||| |||||||||||||| || |||| ||||||||||| ||||||    
T  23709162 aaagagtaatgttatttgaacaacttttttgctacaatttttgggacaaccttgttatgctctcttttcattggtcaagaacaat 23709078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 198 - 260
Target Start/End: Complemental strand, 13924183 - 13924121
Alignment:
Q  198 tatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggt 260  Q
    |||||||||||||||||| || ||||||||||||||| |||||| | || |||||||||||||    
T  13924183 tatttgaacaactcttttggtacaacttttgtgacaatcttgttgtcctctcttctcattggt 13924121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 271
Target Start/End: Original strand, 1422599 - 1422672
Alignment:
Q  198 tatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||||||||| ||||  | ||||||||| ||||||||||||||||| | || ||||||||||| |||||||    
T  1422599 tatttgaacaactattttgatacaacttttgggacaaccttgttattctattttttcattggtcaaaaacaatg 1422672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 271
Target Start/End: Complemental strand, 41776361 - 41776276
Alignment:
Q  186 aaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    |||||||| || ||||||||||||| ||||  | ||||||||| |||||||||||| | || |||| ||||||||||| |||||||    
T  41776361 aaagagtaatgatatttgaacaacttttttgctacaacttttgggacaaccttgttgtgctctcttttcattggtcaaaaacaatg 41776276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 186 - 270
Target Start/End: Complemental strand, 28713279 - 28713195
Alignment:
Q  186 aaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    ||||||||||| |||||||||||||||||| || ||| ||||| |||||||||||| |  | |||||| ||||||| | ||||||    
T  28713279 aaagagtagtgatatttgaacaactcttttggtacaatttttgggacaaccttgttgtattctcttcttattggtcgaaaacaat 28713195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 186 - 270
Target Start/End: Complemental strand, 28720626 - 28720542
Alignment:
Q  186 aaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    ||||||||||| |||||||||||||||||| || ||| ||||| |||||||||||| |  | |||||| ||||||| | ||||||    
T  28720626 aaagagtagtgatatttgaacaactcttttggtacaatttttgggacaaccttgttgtattctcttcttattggtcgaaaacaat 28720542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 186 - 270
Target Start/End: Complemental strand, 28728268 - 28728184
Alignment:
Q  186 aaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    ||||||||||| |||||||||||||||||| || ||| ||||| |||||||||||| |  | |||||| ||||||| | ||||||    
T  28728268 aaagagtagtgatatttgaacaactcttttggtacaatttttgggacaaccttgttgtattctcttcttattggtcgaaaacaat 28728184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 271
Target Start/End: Original strand, 8233383 - 8233466
Alignment:
Q  188 agagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    |||||| || |||||||||| || |||| || ||||||||  || ||||||||| |||| |||||||||||||||| |||||||    
T  8233383 agagtaatgatatttgaacatctatttttgtacaactttttggataaccttgttgttctctcttctcattggtcaaaaacaatg 8233466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 268
Target Start/End: Complemental strand, 28156386 - 28156307
Alignment:
Q  189 gagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataaca 268  Q
    |||||||| |||||  |||||| ||||||| |||| |||| |||||| ||||| |||| |||||||||||||||| ||||    
T  28156386 gagtagtgatattttgacaactattttagtacaacctttgagacaactttgttgttctctcttctcattggtcaaaaaca 28156307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 32234371 - 32234421
Alignment:
Q  220 caacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    ||||||||  ||||||||| ||||||| |||||||||||||||||||||||    
T  32234371 caacttttaggacaacctttttattctctcttctcattggtcaataacaat 32234421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 270
Target Start/End: Original strand, 34838157 - 34838239
Alignment:
Q  188 agagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||| |||| |||||||||||||||||| || ||||||||  |||||||||||| |  | |||||| ||||||||| ||||||    
T  34838157 agagcagtgatatttgaacaactcttttggtacaacttttaggacaaccttgttgtgttctcttcttattggtcaaaaacaat 34838239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 339 - 372
Target Start/End: Complemental strand, 6243078 - 6243045
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||||||||||||||||||||||||    
T  6243078 ttgtacaaaaatgattgtacaaatatcatttctc 6243045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 339 - 372
Target Start/End: Complemental strand, 37471687 - 37471654
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||||||||||||||||||||||||    
T  37471687 ttgtacaaaaatgattgtacaaatatcatttctc 37471654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 271
Target Start/End: Complemental strand, 37471828 - 37471744
Alignment:
Q  187 aagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||| || ||||||||||||| ||||  | ||||||||| ||||| |||||| | || |||| ||||||||||| |||||||    
T  37471828 aagagtaatgatatttgaacaacttttttgctacaacttttgggacaatcttgttgtgctctcttttcattggtcaaaaacaatg 37471744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 270
Target Start/End: Original strand, 43605555 - 43605638
Alignment:
Q  187 aagagtagtgttatttgaacaactcttttagtg-caacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    ||||||| || |||||||||||| ||||||||| ||||||||||||||||||   | |||| |||||| ||||||||| ||||||    
T  43605555 aagagtaatgatatttgaacaac-cttttagtgacaacttttgtgacaacctaccttttctctcttcttattggtcaaaaacaat 43605638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 270
Target Start/End: Original strand, 45405720 - 45405804
Alignment:
Q  186 aaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    ||||||||||| ||||| ||||||  |||| || |||| |||| |||||| || || |||| |||||||||||||||| ||||||    
T  45405720 aaagagtagtgatattttaacaaccattttggtacaacctttgagacaactttattgttctctcttctcattggtcaaaaacaat 45405804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 220 - 271
Target Start/End: Original strand, 2597079 - 2597130
Alignment:
Q  220 caacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||| |||||||||||||| |||| |||||| ||||||||| |||||||    
T  2597079 caactttggtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 2597130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 220 - 271
Target Start/End: Original strand, 30927850 - 30927901
Alignment:
Q  220 caacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||| |||||||||||||| |||| |||||| ||||||||| |||||||    
T  30927850 caactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 30927901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 340 - 370
Target Start/End: Original strand, 8233524 - 8233554
Alignment:
Q  340 tgtacaaaaatgattgtacaaatatcatttc 370  Q
    |||||||||||||||||||||||||||||||    
T  8233524 tgtacaaaaatgattgtacaaatatcatttc 8233554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 271
Target Start/End: Original strand, 14233564 - 14233614
Alignment:
Q  221 aacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||||||||||| ||||| |||| ||||||||||||| || |||||||    
T  14233564 aacttttgtgacaactttgttgttctctcttctcattggtaaaaaacaatg 14233614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 342 - 372
Target Start/End: Complemental strand, 18550009 - 18549979
Alignment:
Q  342 tacaaaaatgattgtacaaatatcatttctc 372  Q
    |||||||||||||||||||||||||||||||    
T  18550009 tacaaaaatgattgtacaaatatcatttctc 18549979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 18550163 - 18550081
Alignment:
Q  188 agagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||||| || ||||||||||||| |||| || ||||||||| |||||||||||| |  | |||||| |||| |||| ||||||    
T  18550163 agagtaatgatatttgaacaactattttggtacaacttttgggacaaccttgttgtgttctcttcttattgatcaaaaacaat 18550081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 34247926 - 34247876
Alignment:
Q  220 caacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    ||||||||| |||||||||||| |||| |||| ||||||||||| ||||||    
T  34247926 caacttttgggacaaccttgttgttctctcttttcattggtcaaaaacaat 34247876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Complemental strand, 13924055 - 13924022
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  13924055 ttgtacaaaaatggttgtacaaatatcatttctc 13924022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Original strand, 20996185 - 20996218
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    |||| |||||||||||||||||||||||||||||    
T  20996185 ttgttcaaaaatgattgtacaaatatcatttctc 20996218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 263
Target Start/End: Original strand, 21649055 - 21649132
Alignment:
Q  186 aaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaa 263  Q
    |||||||| || ||||||||||||| ||||  | ||||||||| |||||||||||| | || |||| | |||||||||    
T  21649055 aaagagtaatgatatttgaacaacttttttgctacaacttttgggacaaccttgttgtgctctctttttattggtcaa 21649132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Original strand, 21649206 - 21649239
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  21649206 ttgtacaaaaatggttgtacaaatatcatttctc 21649239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 271
Target Start/End: Original strand, 22203112 - 22203185
Alignment:
Q  198 tatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||||||||| ||||  | ||||||||| |||||||||||| | || |||| | ||||||||| |||||||    
T  22203112 tatttgaacaacttttttgctacaacttttgggacaaccttgttgtgctctcttttgattggtcaaaaacaatg 22203185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Original strand, 22203253 - 22203286
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  22203253 ttgtacaaaaatggttgtacaaatatcatttctc 22203286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 271
Target Start/End: Original strand, 22836024 - 22836109
Alignment:
Q  186 aaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    |||||||| || ||||||||||||| ||||  | ||| ||||| || ||||||||| | || |||| ||||||||||| |||||||    
T  22836024 aaagagtaatgatatttgaacaacttttttgctacaatttttgggataaccttgttgtgctctcttttcattggtcaaaaacaatg 22836109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Complemental strand, 25430690 - 25430657
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  25430690 ttgtacaaaaatggttgtacaaatatcatttctc 25430657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Complemental strand, 27300379 - 27300346
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  27300379 ttgtacaaaaatggttgtacaaatatcatttctc 27300346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 27300525 - 27300448
Alignment:
Q  193 agtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||| |||||||||||||||||  || ||||||||| ||||| |||||| |  | |||||| ||||||||| ||||||    
T  27300525 agtgatatttgaacaactctttcggtacaacttttgggacaatcttgttgtattctcttcttattggtcaaaaacaat 27300448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Original strand, 34578415 - 34578448
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  34578415 ttgtacaaaaatggttgtacaaatatcatttctc 34578448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Original strand, 35701865 - 35701898
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  35701865 ttgtacaaaaatggttgtacaaatatcatttctc 35701898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Complemental strand, 36675369 - 36675336
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  36675369 ttgtacaaaaatggttgtacaaatatcatttctc 36675336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 271
Target Start/End: Original strand, 5742543 - 5742627
Alignment:
Q  187 aagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    |||||||||| |||||  |||||  |||| || || | |||| |||||| ||||| |||| |||||||||||||||| |||||||    
T  5742543 aagagtagtgatattttgacaaccattttggtacatcctttgagacaactttgttgttctctcttctcattggtcaaaaacaatg 5742627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 1e-20; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 187 - 270
Target Start/End: Original strand, 46355177 - 46355260
Alignment:
Q  187 aagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||||||||||| |||||||||||||||| || ||||||||| |||||| ||| |||||| | |||||||||||||||||||||    
T  46355177 aagagtagtgttgtttgaacaactctttttgtacaacttttgggacaactttggtattctcttttctcattggtcaataacaat 46355260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 192 - 266
Target Start/End: Original strand, 37775318 - 37775392
Alignment:
Q  192 tagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataa 266  Q
    |||||||||||||||||||||||| || ||||||||| ||||||||||||||||| | || ||||||||||||||    
T  37775318 tagtgttatttgaacaactcttttcgtacaacttttgagacaaccttgttattctctattatcattggtcaataa 37775392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 186 - 270
Target Start/End: Complemental strand, 50291468 - 50291384
Alignment:
Q  186 aaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||||||||||||||||||||||||||||| || ||||||||| |||||||||||| |  | |||||| ||||||||| ||||||    
T  50291468 aaagagtagtgttatttgaacaactcttttggtacaacttttgggacaaccttgttgtgttctcttcttattggtcaaaaacaat 50291384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 266
Target Start/End: Original strand, 54801378 - 54801452
Alignment:
Q  192 tagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataa 266  Q
    ||||||||||||||||||||||||  |  || ||||| |||||| |||||||||| |||||||||||||||||||    
T  54801378 tagtgttatttgaacaactcttttgatataatttttgagacaactttgttattctctcttctcattggtcaataa 54801452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 270
Target Start/End: Complemental strand, 8614367 - 8614284
Alignment:
Q  187 aagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||||||||| ||||||||||||| |||| || ||| ||||| |||||||||||| |  |||||||| ||||||||| ||||||    
T  8614367 aagagtagtgatatttgaacaactttttttgtacaatttttgggacaaccttgttgtgttttcttcttattggtcaaaaacaat 8614284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 188 - 268
Target Start/End: Complemental strand, 18944469 - 18944389
Alignment:
Q  188 agagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataaca 268  Q
    ||||||||| |||||||||||||||||| || ||||||||| ||||||||| || |  | |||||| ||||||||| ||||    
T  18944469 agagtagtgatatttgaacaactcttttggtacaacttttgggacaaccttattgtgttctcttcttattggtcaaaaaca 18944389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 270
Target Start/End: Complemental strand, 32574462 - 32574379
Alignment:
Q  187 aagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    ||||||| |||||||||||||| | |||| ||  |||||||  |||||| ||| |||| | |||||||||||||||||||||||    
T  32574462 aagagtaatgttatttgaacaattttttttgtataacttttaagacaactttggtattatctcttctcattggtcaataacaat 32574379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 271
Target Start/End: Complemental strand, 4878154 - 4878068
Alignment:
Q  185 taaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||| | || ||||||||||||| ||||  | ||||||||| |||||||||||| | || |||| ||||||||||| |||||||    
T  4878154 taaagagcaatgatatttgaacaacttttttgctacaacttttgggacaaccttgttgtgctctcttttcattggtcaaaaacaatg 4878068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 271
Target Start/End: Complemental strand, 45678446 - 45678364
Alignment:
Q  189 gagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||| || ||||||||||||| |||| || |||||||||  ||||||||||| |||| |||| | ||||||||| |||||||    
T  45678446 gagtaatgatatttgaacaactattttggtacaacttttggtacaaccttgttgttctctctttttattggtcaaaaacaatg 45678364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 339 - 372
Target Start/End: Complemental strand, 22893902 - 22893869
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||||||||||||||||||||||||    
T  22893902 ttgtacaaaaatgattgtacaaatatcatttctc 22893869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 339 - 372
Target Start/End: Complemental strand, 22945570 - 22945537
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||||||||||||||||||||||||    
T  22945570 ttgtacaaaaatgattgtacaaatatcatttctc 22945537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 263
Target Start/End: Complemental strand, 36110320 - 36110243
Alignment:
Q  186 aaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaa 263  Q
    ||||||||||| ||||||||||||||||||  | ||| ||||| |||||||||||| |  | |||||| |||||||||    
T  36110320 aaagagtagtgatatttgaacaactcttttgatacaatttttgggacaaccttgttgtgttctcttcttattggtcaa 36110243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 339 - 372
Target Start/End: Complemental strand, 50291315 - 50291282
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||||||||||||||||||||||||    
T  50291315 ttgtacaaaaatgattgtacaaatatcatttctc 50291282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 270
Target Start/End: Original strand, 1727979 - 1728058
Alignment:
Q  191 gtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||||| |||||||| || | ||||||| ||| ||||| |||||||||||| |  |||||||| ||||||||| ||||||    
T  1727979 gtagtgatatttgaataatttttttagtacaatttttgggacaaccttgttgtgttttcttcttattggtcaaaaacaat 1728058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 220 - 271
Target Start/End: Original strand, 5208246 - 5208297
Alignment:
Q  220 caacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||| |||||||||||||| |||| |||||| ||||||||| |||||||    
T  5208246 caactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 5208297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 220 - 271
Target Start/End: Original strand, 27001328 - 27001379
Alignment:
Q  220 caacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||| |||||||||||||| |||| |||||| ||||||||| |||||||    
T  27001328 caactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 27001379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 182 - 241
Target Start/End: Original strand, 32294633 - 32294692
Alignment:
Q  182 gtataaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgtt 241  Q
    |||| |||||||||| |||||||||||||||||| ||  || ||||| ||||||||||||    
T  32294633 gtattaagagtagtgatatttgaacaactcttttggtataatttttgggacaaccttgtt 32294692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 220 - 271
Target Start/End: Complemental strand, 47106063 - 47106012
Alignment:
Q  220 caacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||| |||||||||||||| |||| |||||| ||||||||| |||||||    
T  47106063 caactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 47106012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 220 - 271
Target Start/End: Original strand, 51377212 - 51377263
Alignment:
Q  220 caacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||| |||||||||||||| |||| |||||| ||||||||| |||||||    
T  51377212 caactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 51377263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 220 - 263
Target Start/End: Original strand, 53763730 - 53763773
Alignment:
Q  220 caacttttgtgacaaccttgttattctttcttctcattggtcaa 263  Q
    ||||||||| ||||||||| ||||||||| ||||||||||||||    
T  53763730 caacttttgggacaaccttattattcttttttctcattggtcaa 53763773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 220 - 271
Target Start/End: Original strand, 53781756 - 53781807
Alignment:
Q  220 caacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||||| |||||||||||||| || |||| ||||||||||| |||||||    
T  53781756 caacttttgggacaaccttgttatgctctcttttcattggtcaaaaacaatg 53781807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 1868779 - 1868833
Alignment:
Q  187 aagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgtt 241  Q
    ||||||| || ||||||||||||| ||||| | ||||||||| ||||||||||||    
T  1868779 aagagtaatgatatttgaacaacttttttactacaacttttgggacaaccttgtt 1868833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 3476020 - 3475970
Alignment:
Q  220 caacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||| |||||||||||||| || ||||||||| ||||||||||| ||||||    
T  3476020 caacatttgtgacaaccttatttttctttcttttcattggtcaaaaacaat 3475970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 4949153 - 4949203
Alignment:
Q  220 caacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    ||||||||| |||||| ||||| |||||||||||||||||| || ||||||    
T  4949153 caacttttgagacaactttgttgttctttcttctcattggttaaaaacaat 4949203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 41170924 - 41170874
Alignment:
Q  220 caacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    ||||||||| |||||||||| ||||||||| | ||||||||||| ||||||    
T  41170924 caacttttgggacaaccttgctattctttcatttcattggtcaaaaacaat 41170874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 270
Target Start/End: Original strand, 46791878 - 46791960
Alignment:
Q  188 agagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||| |||| ||||||||||||||||||  | ||||||||| ||||||||  || |||| ||| ||||||| |||| ||||||    
T  46791878 agaggagtgatatttgaacaactcttttgatacaacttttgagacaacctcattgttctctctactcattgatcaaaaacaat 46791960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 342 - 372
Target Start/End: Original strand, 51107482 - 51107512
Alignment:
Q  342 tacaaaaatgattgtacaaatatcatttctc 372  Q
    |||||||||||||||||||||||||||||||    
T  51107482 tacaaaaatgattgtacaaatatcatttctc 51107512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Original strand, 1868920 - 1868953
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  1868920 ttgtacaaaaatggttgtacaaatatcatttctc 1868953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Original strand, 6256487 - 6256520
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    |||||||||||||||||||||||||| |||||||    
T  6256487 ttgtacaaaaatgattgtacaaatattatttctc 6256520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Complemental strand, 7795058 - 7795025
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  7795058 ttgtacaaaaatggttgtacaaatatcatttctc 7795025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Complemental strand, 21766591 - 21766558
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    |||||||||||||||| |||||||||||||||||    
T  21766591 ttgtacaaaaatgattatacaaatatcatttctc 21766558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 21766726 - 21766649
Alignment:
Q  193 agtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||| |||||||||||||||||| ||  |||||||| |||||||||||| |  | |||||| |||||| || ||||||    
T  21766726 agtgatatttgaacaactcttttggtataacttttgggacaaccttgttgtgttctcttcttattggttaaaaacaat 21766649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Original strand, 24310548 - 24310581
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  24310548 ttgtacaaaaatggttgtacaaatatcatttctc 24310581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Original strand, 28899242 - 28899275
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    |||||| |||||||||||||||||||||||||||    
T  28899242 ttgtaccaaaatgattgtacaaatatcatttctc 28899275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 271
Target Start/End: Original strand, 29577333 - 29577406
Alignment:
Q  198 tatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    |||||||||| ||  ||| || ||| ||||| |||||||||||| |||| |||| ||||||||||| |||||||    
T  29577333 tatttgaacatctacttttgtacaatttttgggacaaccttgttgttctctcttttcattggtcaaaaacaatg 29577406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 271
Target Start/End: Complemental strand, 33777068 - 33776995
Alignment:
Q  198 tatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||||||||| |||| || ||| ||||| || ||||||||| |||| |||| | ||||||||| |||||||    
T  33777068 tatttgaacaactattttggtacaatttttgggataaccttgttgttctctctttttattggtcaaaaacaatg 33776995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Complemental strand, 37731959 - 37731926
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    |||||| |||||||||||||||||||||||||||    
T  37731959 ttgtaccaaaatgattgtacaaatatcatttctc 37731926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Original strand, 41010196 - 41010229
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||||||||| ||||||||||||||    
T  41010196 ttgtacaaaaatgattgtataaatatcatttctc 41010229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 251
Target Start/End: Original strand, 43759066 - 43759130
Alignment:
Q  186 aaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttctt 251  Q
    ||||||||||| |||||| ||||||||||| || |||| ||| ||||||||||||| |||| ||||    
T  43759066 aaagagtagtgatatttgtacaactctttt-gtacaacctttatgacaaccttgtttttctatctt 43759130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 271
Target Start/End: Complemental strand, 43983071 - 43982998
Alignment:
Q  198 tatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||||||||  |||| || ||||||||  ||||| || ||| |||| |||||||||||||||| |||||||    
T  43983071 tatttgaacaaccattttggtacaacttttaggacaatctagttgttctctcttctcattggtcaaaaacaatg 43982998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Complemental strand, 45678307 - 45678274
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||||||||||||||| ||||||||    
T  45678307 ttgtacaaaaatgattgtacaaataacatttctc 45678274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 271
Target Start/End: Complemental strand, 47998778 - 47998695
Alignment:
Q  186 aaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||||||| ||||||||||| || |||  | |||||||||||| ||| || || ||||||||| ||||||||||| |||||||    
T  47998778 aaagagtagtgatatttgaacaa-tcatttgatacaacttttgtgataactttttt-ttctttcttttcattggtcaaaaacaatg 47998695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 339 - 371
Target Start/End: Original strand, 38960698 - 38960730
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttct 371  Q
    ||||||||||||| |||||||||||||||||||    
T  38960698 ttgtacaaaaatggttgtacaaatatcatttct 38960730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 270
Target Start/End: Original strand, 42915105 - 42915188
Alignment:
Q  186 aaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    ||||||||||| ||||||||||||| ||| | | |||||||||||||||| |  || |||| |||| |||||||| || ||||||    
T  42915105 aaagagtagtgatatttgaacaactatttga-tacaacttttgtgacaacttcttttttctctcttttcattggttaaaaacaat 42915188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 339 - 371
Target Start/End: Complemental strand, 54848182 - 54848150
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttct 371  Q
    ||||||||||||| |||||||||||||||||||    
T  54848182 ttgtacaaaaatggttgtacaaatatcatttct 54848150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 186 - 270
Target Start/End: Original strand, 23174 - 23258
Alignment:
Q  186 aaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||||||||| ||||||||||||||||||| ||  |||||||  ||||| |||| |||||| |||||||||||||||||||||||    
T  23174 aaagagtagtattatttgaacaactctttttgtataacttttaggacaatcttgatattctctcttctcattggtcaataacaat 23258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 145230 - 145149
Alignment:
Q  189 gagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||||||| |||||||||||||||||| || ||||||||| |||||||||||| |  | |||||| ||||||||| ||||||    
T  145230 gagtagtgatatttgaacaactcttttggtacaacttttgggacaaccttgttgtgttctcttcttattggtcaaaaacaat 145149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Complemental strand, 145094 - 145061
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  145094 ttgtacaaaaatggttgtacaaatatcatttctc 145061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 198 - 271
Target Start/End: Original strand, 608558 - 608631
Alignment:
Q  198 tatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||||||||| |||| || ||||| ||| |||||||||||| |||| |||||||||||||||| |||||||    
T  608558 tatttgaacaactattttggtacaactgttgggacaaccttgttgttctctcttctcattggtcaaaaacaatg 608631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 270
Target Start/End: Original strand, 7303987 - 7304074
Alignment:
Q  183 tataaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    |||| |||| |||| ||||||||||||||||||  | ||||||||| ||||||||  || |||| |||||||||||||||| ||||||    
T  7303987 tatacagaggagtgatatttgaacaactcttttgatacaacttttgagacaacctcattgttctctcttctcattggtcaaaaacaat 7304074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 271
Target Start/End: Complemental strand, 19713180 - 19713095
Alignment:
Q  186 aaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    |||||||| || ||||||||||||| |||||   ||||||||| |||||||||||| | || |||| |||||||| || |||||||    
T  19713180 aaagagtaatgatatttgaacaacttttttacaacaacttttgggacaaccttgttgtgctctcttttcattggtaaaaaacaatg 19713095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 339 - 372
Target Start/End: Original strand, 32135458 - 32135491
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||||||||||||||||||||||||    
T  32135458 ttgtacaaaaatgattgtacaaatatcatttctc 32135491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 339 - 372
Target Start/End: Complemental strand, 34792055 - 34792022
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||||||||||||||||||||||||    
T  34792055 ttgtacaaaaatgattgtacaaatatcatttctc 34792022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 241
Target Start/End: Complemental strand, 34792190 - 34792137
Alignment:
Q  188 agagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgtt 241  Q
    ||||||||| |||||||||||||||||| ||  |||||||| ||||||||||||    
T  34792190 agagtagtgatatttgaacaactcttttggtataacttttgggacaaccttgtt 34792137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 17443008 - 17442956
Alignment:
Q  186 aaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaacctt 238  Q
    ||||||||||| | |||||||||||||||| || ||||||||| |||||||||    
T  17443008 aaagagtagtgatttttgaacaactcttttggtacaacttttgggacaacctt 17442956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 271
Target Start/End: Complemental strand, 22422335 - 22422251
Alignment:
Q  187 aagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||| || ||||||||||| | |||| || |||||||||  ||||| ||||| |||| |||||||||| ||||| |||||||    
T  22422335 aagagtaatgatatttgaacaattattttggtacaacttttggtacaactttgttgttctctcttctcattagtcaaaaacaatg 22422251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 220 - 271
Target Start/End: Complemental strand, 1804021 - 1803970
Alignment:
Q  220 caacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||| |||||||||||||| |||| |||||| ||||||||| |||||||    
T  1804021 caactttggtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 1803970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 188 - 271
Target Start/End: Original strand, 9395224 - 9395307
Alignment:
Q  188 agagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    |||||| || ||||||||||||| ||||  | ||||||||| ||||| |||||| | || |||| ||||||||||| |||||||    
T  9395224 agagtaatgatatttgaacaacttttttgctacaacttttgggacaatcttgttgtgctctcttatcattggtcaaaaacaatg 9395307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Original strand, 2165327 - 2165360
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  2165327 ttgtacaaaaatggttgtacaaatatcatttctc 2165360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Original strand, 2176960 - 2176993
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  2176960 ttgtacaaaaatggttgtacaaatatcatttctc 2176993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Complemental strand, 16121196 - 16121163
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  16121196 ttgtacaaaaatggttgtacaaatatcatttctc 16121163  T

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Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Complemental strand, 19712388 - 19712355
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    |||||||||| |||||||||||||||||||||||    
T  19712388 ttgtacaaaagtgattgtacaaatatcatttctc 19712355  T

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Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Original strand, 27790273 - 27790306
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  27790273 ttgtacaaaaatggttgtacaaatatcatttctc 27790306  T

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Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 339 - 371
Target Start/End: Complemental strand, 16865597 - 16865565
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttct 371  Q
    |||||||||| ||||||||||||||||||||||    
T  16865597 ttgtacaaaagtgattgtacaaatatcatttct 16865565  T

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Target: scaffold0514 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 189 - 263
Target Start/End: Original strand, 1735 - 1809
Alignment:
Q  189 gagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaa 263  Q
    |||||||| |||||||||||||||||| || ||||||||| ||||| ||||||||  | |||||| |||||||||    
T  1735 gagtagtgatatttgaacaactcttttggtacaacttttgggacaatcttgttatgttctcttcttattggtcaa 1809  T

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Target: scaffold0024 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 183 - 270
Target Start/End: Complemental strand, 48843 - 48756
Alignment:
Q  183 tataaagagtagtgttatttgaacaactcttttagtgcaacttttgtgacaaccttgttattctttcttctcattggtcaataacaat 270  Q
    ||||||||||| || ||||||||||| ||||||  | ||| ||||| |||||||||||| |  | |||||| ||||||||| ||||||    
T  48843 tataaagagtaatgatatttgaacaattcttttgatacaatttttgggacaaccttgttgtgttctcttcttattggtcaaaaacaat 48756  T

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Target: scaffold0024; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 339 - 369
Target Start/End: Complemental strand, 48687 - 48657
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcattt 369  Q
    |||||||||||||||||||||||||||||||    
T  48687 ttgtacaaaaatgattgtacaaatatcattt 48657  T

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Target: scaffold0002 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 220 - 271
Target Start/End: Original strand, 147175 - 147226
Alignment:
Q  220 caacttttgtgacaaccttgttattctttcttctcattggtcaataacaatg 271  Q
    ||||||| |||||||||||||| |||| |||||| ||||||||| |||||||    
T  147175 caactttagtgacaaccttgtttttctctcttcttattggtcaaaaacaatg 147226  T

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Target: scaffold0286 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 372
Target Start/End: Complemental strand, 17082 - 17049
Alignment:
Q  339 ttgtacaaaaatgattgtacaaatatcatttctc 372  Q
    ||||||||||||| ||||||||||||||||||||    
T  17082 ttgtacaaaaatggttgtacaaatatcatttctc 17049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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