View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11741_low_4 (Length: 390)

Name: NF11741_low_4
Description: NF11741
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11741_low_4
NF11741_low_4
[»] chr5 (55 HSPs)
chr5 (10-371)||(15044586-15044947)
chr5 (10-373)||(43592176-43592540)
chr5 (10-373)||(27449711-27450075)
chr5 (10-373)||(43598621-43598985)
chr5 (10-373)||(43604113-43604477)
chr5 (10-373)||(43609605-43609969)
chr5 (10-373)||(1456986-1457349)
chr5 (10-373)||(27444867-27445231)
chr5 (40-373)||(28807429-28807762)
chr5 (40-371)||(37556478-37556809)
chr5 (40-371)||(37561300-37561631)
chr5 (92-371)||(30631306-30631586)
chr5 (40-371)||(2785275-2785608)
chr5 (40-371)||(33791216-33791549)
chr5 (91-347)||(31180138-31180394)
chr5 (40-280)||(31396843-31397088)
chr5 (40-371)||(31401700-31402035)
chr5 (91-371)||(38192074-38192353)
chr5 (91-371)||(38219299-38219578)
chr5 (40-371)||(33768079-33768417)
chr5 (91-373)||(24135749-24136028)
chr5 (91-292)||(35387640-35387842)
chr5 (12-91)||(30631640-30631719)
chr5 (12-91)||(31180447-31180526)
chr5 (12-91)||(24136080-24136159)
chr5 (175-269)||(9353333-9353429)
chr5 (175-269)||(36932351-36932447)
chr5 (145-269)||(10281751-10281877)
chr5 (91-269)||(15464532-15464712)
chr5 (175-268)||(11916972-11917068)
chr5 (12-91)||(35387893-35387972)
chr5 (145-269)||(14520230-14520355)
chr5 (184-270)||(17003970-17004058)
chr5 (175-270)||(3880298-3880396)
chr5 (175-266)||(12084176-12084269)
chr5 (175-269)||(19588746-19588843)
chr5 (187-270)||(28832258-28832343)
chr5 (12-91)||(38219629-38219708)
chr5 (187-270)||(42127423-42127508)
chr5 (206-265)||(4410241-4410301)
chr5 (190-270)||(31300612-31300694)
chr5 (206-265)||(15552464-15552524)
chr5 (12-91)||(24553318-24553395)
chr5 (206-265)||(31179371-31179431)
chr5 (206-265)||(31542953-31543013)
chr5 (206-265)||(31545299-31545359)
chr5 (30-91)||(11181641-11181700)
chr5 (212-265)||(27910675-27910729)
chr5 (29-89)||(7160712-7160770)
chr5 (29-89)||(14520461-14520519)
chr5 (187-270)||(24553520-24553604)
chr5 (31-91)||(28832486-28832544)
chr5 (206-265)||(3373137-3373197)
chr5 (206-265)||(10749919-10749979)
chr5 (206-265)||(15354575-15354635)
[»] chr2 (58 HSPs)
chr2 (10-371)||(39811812-39812173)
chr2 (27-371)||(32246684-32247031)
chr2 (125-373)||(44312563-44312811)
chr2 (40-371)||(19344320-19344655)
chr2 (40-371)||(19349178-19349513)
chr2 (91-371)||(11098843-11099124)
chr2 (91-373)||(14291386-14291669)
chr2 (91-373)||(9296317-9296600)
chr2 (91-371)||(25398396-25398675)
chr2 (91-371)||(25403534-25403813)
chr2 (91-292)||(3491729-3491930)
chr2 (12-91)||(11098711-11098790)
chr2 (184-270)||(8040059-8040147)
chr2 (93-266)||(13569331-13569506)
chr2 (187-292)||(40738822-40738926)
chr2 (12-91)||(9296186-9296265)
chr2 (12-91)||(14291722-14291801)
chr2 (91-239)||(25407653-25407802)
chr2 (175-270)||(21629943-21630040)
chr2 (145-269)||(28259149-28259274)
chr2 (175-270)||(10445444-10445542)
chr2 (175-270)||(17865202-17865300)
chr2 (175-270)||(20522219-20522317)
chr2 (175-270)||(34682334-34682432)
chr2 (175-268)||(34388859-34388955)
chr2 (145-268)||(10707223-10707348)
chr2 (175-270)||(14699008-14699105)
chr2 (158-266)||(8390133-8390244)
chr2 (29-91)||(25409860-25409922)
chr2 (184-269)||(31056044-31056131)
chr2 (145-269)||(23078442-23078567)
chr2 (175-270)||(33528621-33528719)
chr2 (129-269)||(36757718-36757859)
chr2 (175-270)||(39482930-39483028)
chr2 (184-270)||(16940219-16940307)
chr2 (184-270)||(17010884-17010972)
chr2 (175-269)||(42039670-42039766)
chr2 (185-270)||(33118135-33118222)
chr2 (29-91)||(3491981-3492043)
chr2 (206-266)||(1345574-1345635)
chr2 (206-266)||(2838063-2838124)
chr2 (206-265)||(35215586-35215646)
chr2 (206-265)||(35217963-35218023)
chr2 (12-91)||(40739063-40739140)
chr2 (186-248)||(27149306-27149369)
chr2 (29-91)||(36757570-36757630)
chr2 (29-91)||(39483162-39483222)
chr2 (186-266)||(2869705-2869787)
chr2 (31-91)||(21630174-21630232)
chr2 (209-265)||(45332181-45332238)
chr2 (29-69)||(20522471-20522511)
chr2 (28-91)||(23078278-23078339)
chr2 (206-265)||(23452237-23452297)
chr2 (28-91)||(29867780-29867840)
chr2 (206-265)||(36558864-36558924)
chr2 (206-265)||(36561141-36561201)
chr2 (91-171)||(40738933-40739012)
chr2 (29-91)||(41586358-41586419)
[»] chr7 (62 HSPs)
chr7 (10-371)||(31109407-31109768)
chr7 (10-373)||(12396809-12397172)
chr7 (17-373)||(12406229-12406585)
chr7 (10-373)||(24024151-24024515)
chr7 (40-370)||(19992213-19992544)
chr7 (40-371)||(21812092-21812424)
chr7 (40-285)||(24266054-24266302)
chr7 (40-307)||(24261175-24261447)
chr7 (91-371)||(20357463-20357744)
chr7 (180-373)||(4866627-4866820)
chr7 (91-373)||(2057857-2058147)
chr7 (40-307)||(16884890-16885162)
chr7 (40-307)||(16880034-16880306)
chr7 (91-371)||(21639711-21639988)
chr7 (91-371)||(1533359-1533639)
chr7 (91-371)||(21645909-21646186)
chr7 (91-292)||(18408742-18408943)
chr7 (91-292)||(18413619-18413819)
chr7 (12-89)||(4873310-4873387)
chr7 (12-91)||(20357331-20357410)
chr7 (12-91)||(1533228-1533307)
chr7 (12-91)||(2058202-2058281)
chr7 (129-268)||(21983285-21983427)
chr7 (145-270)||(29159802-29159929)
chr7 (175-270)||(46516310-46516408)
chr7 (175-270)||(49091660-49091758)
chr7 (175-269)||(44848685-44848781)
chr7 (129-270)||(2580389-2580531)
chr7 (175-270)||(2647696-2647794)
chr7 (175-270)||(33332450-33332548)
chr7 (187-270)||(9190021-9190106)
chr7 (187-270)||(20284088-20284173)
chr7 (12-91)||(21640039-21640118)
chr7 (175-270)||(55947-56044)
chr7 (29-91)||(21646237-21646299)
chr7 (12-91)||(18408993-18409072)
chr7 (186-270)||(35960815-35960901)
chr7 (187-270)||(9185178-9185263)
chr7 (12-91)||(18413869-18413948)
chr7 (145-269)||(2479337-2479461)
chr7 (175-270)||(4796667-4796765)
chr7 (190-269)||(47263678-47263757)
chr7 (206-266)||(28617258-28617319)
chr7 (185-268)||(21988909-21988992)
chr7 (206-265)||(31155911-31155971)
chr7 (29-91)||(20284318-20284378)
chr7 (29-91)||(23402821-23402881)
chr7 (30-91)||(4796477-4796536)
chr7 (186-269)||(5817282-5817366)
chr7 (29-89)||(44847933-44847991)
chr7 (206-265)||(1049296-1049356)
chr7 (12-91)||(2479565-2479642)
chr7 (206-265)||(2935497-2935557)
chr7 (206-265)||(3035953-3036013)
chr7 (206-265)||(7351652-7351712)
chr7 (222-269)||(8153466-8153514)
chr7 (206-265)||(9027194-9027254)
chr7 (32-91)||(21989137-21989194)
chr7 (206-265)||(22108295-22108355)
chr7 (206-265)||(22137306-22137366)
chr7 (206-265)||(40550055-40550115)
chr7 (206-265)||(40552333-40552393)
[»] chr6 (39 HSPs)
chr6 (12-373)||(14737403-14737764)
chr6 (12-370)||(14742263-14742620)
chr6 (10-373)||(22010521-22010884)
chr6 (10-373)||(11856869-11857235)
chr6 (21-373)||(28184402-28184757)
chr6 (27-373)||(6438398-6438743)
chr6 (27-371)||(28155412-28155756)
chr6 (40-371)||(6005317-6005650)
chr6 (40-371)||(16838644-16838977)
chr6 (40-280)||(33330297-33330540)
chr6 (40-280)||(33335794-33336037)
chr6 (91-371)||(5674685-5674965)
chr6 (12-91)||(5674554-5674633)
chr6 (158-269)||(5757462-5757575)
chr6 (175-269)||(21356036-21356132)
chr6 (185-270)||(10077176-10077263)
chr6 (175-270)||(5572241-5572339)
chr6 (186-270)||(31086485-31086571)
chr6 (91-292)||(22708996-22709188)
chr6 (185-269)||(4629954-4630040)
chr6 (175-270)||(31979512-31979610)
chr6 (175-270)||(22963699-22963796)
chr6 (175-270)||(23824597-23824694)
chr6 (175-257)||(21801344-21801429)
chr6 (187-270)||(31936586-31936671)
chr6 (224-280)||(5343471-5343527)
chr6 (175-248)||(18232867-18232942)
chr6 (187-270)||(5017482-5017567)
chr6 (40-120)||(5343628-5343710)
chr6 (206-265)||(12195515-12195575)
chr6 (29-91)||(5017304-5017364)
chr6 (12-89)||(22709241-22709316)
chr6 (206-265)||(4816231-4816291)
chr6 (206-265)||(5273216-5273276)
chr6 (206-265)||(19704567-19704627)
chr6 (206-265)||(20915356-20915416)
chr6 (206-265)||(26932562-26932622)
chr6 (206-265)||(29754709-29754769)
chr6 (206-265)||(33309110-33309170)
[»] chr4 (51 HSPs)
chr4 (10-373)||(9224231-9224594)
chr4 (10-373)||(9229018-9229381)
chr4 (13-373)||(51520354-51520715)
chr4 (27-371)||(45357138-45357482)
chr4 (27-371)||(45347658-45348003)
chr4 (12-373)||(3813921-3814281)
chr4 (27-371)||(5732561-5732907)
chr4 (40-373)||(18855624-18855956)
chr4 (139-373)||(56146664-56146899)
chr4 (91-371)||(24741840-24742121)
chr4 (93-371)||(29760542-29760821)
chr4 (10-97)||(18712590-18712677)
chr4 (12-91)||(24742174-24742253)
chr4 (187-292)||(28468542-28468647)
chr4 (91-292)||(31985552-31985752)
chr4 (12-91)||(29760874-29760954)
chr4 (175-270)||(10047378-10047476)
chr4 (175-270)||(39245993-39246091)
chr4 (175-270)||(36315230-36315327)
chr4 (175-270)||(36329439-36329536)
chr4 (184-270)||(38152449-38152537)
chr4 (145-269)||(5396643-5396768)
chr4 (175-270)||(16623293-16623391)
chr4 (187-272)||(5269204-5269291)
chr4 (158-269)||(3796502-3796616)
chr4 (185-268)||(5143260-5143345)
chr4 (145-268)||(5147678-5147803)
chr4 (184-270)||(24333808-24333896)
chr4 (175-268)||(3777550-3777645)
chr4 (184-264)||(6743425-6743507)
chr4 (175-270)||(16630680-16630778)
chr4 (187-270)||(25862035-25862120)
chr4 (12-91)||(28468325-28468404)
chr4 (32-91)||(5112466-5112523)
chr4 (206-265)||(16931789-16931849)
chr4 (206-265)||(16934143-16934203)
chr4 (206-265)||(22780373-22780433)
chr4 (206-265)||(44599838-44599898)
chr4 (29-91)||(3777778-3777838)
chr4 (29-91)||(5396479-5396539)
chr4 (29-91)||(16623101-16623161)
chr4 (29-91)||(16628680-16628740)
chr4 (175-248)||(39774305-39774380)
chr4 (185-270)||(54867183-54867269)
chr4 (29-89)||(5269008-5269066)
chr4 (32-91)||(6743226-6743283)
chr4 (206-265)||(6765117-6765177)
chr4 (206-265)||(7941596-7941656)
chr4 (206-265)||(18709164-18709224)
chr4 (206-265)||(22782738-22782798)
chr4 (29-88)||(25861841-25861898)
[»] scaffold0135 (1 HSPs)
scaffold0135 (10-373)||(34886-35249)
[»] chr8 (50 HSPs)
chr8 (10-373)||(7289750-7290114)
chr8 (27-368)||(39784665-39785006)
chr8 (12-371)||(25328105-25328463)
chr8 (91-373)||(6311195-6311477)
chr8 (40-371)||(35745291-35745624)
chr8 (91-371)||(36979277-36979558)
chr8 (40-307)||(10684116-10684388)
chr8 (92-371)||(33037724-33038004)
chr8 (91-371)||(30655543-30655827)
chr8 (91-371)||(4759991-4760273)
chr8 (91-339)||(18853083-18853332)
chr8 (91-339)||(18870477-18870726)
chr8 (91-371)||(10689058-10689340)
chr8 (91-292)||(1261871-1262073)
chr8 (91-292)||(31071146-31071349)
chr8 (187-292)||(26287879-26287985)
chr8 (187-292)||(26301136-26301242)
chr8 (187-292)||(26313130-26313236)
chr8 (10-91)||(6311532-6311613)
chr8 (12-91)||(18870345-18870424)
chr8 (12-103)||(25327979-25328070)
chr8 (12-91)||(30655880-30655959)
chr8 (12-91)||(10688924-10689003)
chr8 (12-91)||(18852951-18853030)
chr8 (12-91)||(33037592-33037671)
chr8 (184-270)||(26403240-26403328)
chr8 (11-91)||(4759857-4759938)
chr8 (175-269)||(4456028-4456124)
chr8 (12-91)||(1261741-1261820)
chr8 (12-91)||(36979611-36979689)
chr8 (175-266)||(7412344-7412437)
chr8 (175-269)||(19175755-19175851)
chr8 (145-270)||(23799548-23799675)
chr8 (187-270)||(4696609-4696694)
chr8 (175-270)||(5702483-5702581)
chr8 (175-266)||(6127224-6127318)
chr8 (206-267)||(9765852-9765914)
chr8 (187-270)||(19752407-19752492)
chr8 (31-91)||(31071035-31071095)
chr8 (29-91)||(26288121-26288183)
chr8 (29-91)||(26301378-26301440)
chr8 (29-91)||(26313372-26313434)
chr8 (29-91)||(7412569-7412629)
chr8 (206-265)||(43079877-43079937)
chr8 (206-265)||(43082248-43082308)
chr8 (29-91)||(4696416-4696476)
chr8 (203-269)||(6813683-6813750)
chr8 (206-239)||(18810982-18811015)
chr8 (29-88)||(23799384-23799441)
chr8 (206-265)||(44721118-44721178)
[»] chr3 (76 HSPs)
chr3 (10-373)||(22173019-22173382)
chr3 (27-371)||(18656331-18656677)
chr3 (91-371)||(7167144-7167425)
chr3 (40-280)||(2676939-2677182)
chr3 (91-371)||(28503780-28504052)
chr3 (40-280)||(2672783-2673026)
chr3 (40-371)||(24968007-24968340)
chr3 (40-285)||(8512202-8512450)
chr3 (40-285)||(8517082-8517330)
chr3 (91-373)||(2671502-2671785)
chr3 (94-336)||(8738982-8739224)
chr3 (94-336)||(9091220-9091462)
chr3 (40-307)||(32475446-32475717)
chr3 (40-307)||(32480304-32480575)
chr3 (91-290)||(40372712-40372911)
chr3 (91-371)||(8477264-8477545)
chr3 (91-226)||(28501613-28501750)
chr3 (91-292)||(26928507-26928709)
chr3 (91-292)||(32143299-32143501)
chr3 (91-292)||(1305927-1306128)
chr3 (11-91)||(8738846-8738926)
chr3 (12-91)||(2671370-2671449)
chr3 (12-91)||(40372580-40372659)
chr3 (12-91)||(7167478-7167558)
chr3 (15-91)||(8477598-8477674)
chr3 (12-91)||(9091085-9091164)
chr3 (91-269)||(27452958-27453138)
chr3 (12-91)||(28501480-28501560)
chr3 (12-91)||(28503647-28503727)
chr3 (175-269)||(8370477-8370573)
chr3 (175-269)||(27974943-27975039)
chr3 (175-270)||(18552873-18552971)
chr3 (158-269)||(16264350-16264463)
chr3 (175-270)||(21711222-21711319)
chr3 (187-269)||(27986449-27986533)
chr3 (175-268)||(36029094-36029190)
chr3 (175-266)||(1736295-1736389)
chr3 (175-269)||(30709780-30709877)
chr3 (144-270)||(40592742-40592870)
chr3 (187-269)||(33386669-33386753)
chr3 (221-280)||(10207924-10207983)
chr3 (175-270)||(3715992-3716090)
chr3 (175-270)||(48438213-48438311)
chr3 (175-270)||(6794704-6794801)
chr3 (175-270)||(26298987-26299085)
chr3 (175-269)||(25795781-25795878)
chr3 (175-270)||(47923896-47923994)
chr3 (206-270)||(1417513-1417578)
chr3 (187-270)||(37466290-37466375)
chr3 (31-91)||(1306179-1306239)
chr3 (187-269)||(39039995-39040079)
chr3 (175-270)||(40844651-40844748)
chr3 (187-270)||(3328359-3328444)
chr3 (203-269)||(4386947-4387014)
chr3 (175-270)||(24695154-24695252)
chr3 (29-88)||(4386774-4386831)
chr3 (12-91)||(27986236-27986313)
chr3 (206-265)||(38210569-38210629)
chr3 (206-265)||(50494198-50494258)
chr3 (202-265)||(53894055-53894119)
chr3 (29-91)||(23392106-23392166)
chr3 (29-91)||(24694963-24695023)
chr3 (29-91)||(26928396-26928456)
chr3 (29-91)||(36029322-36029382)
chr3 (29-91)||(40592579-40592639)
chr3 (187-248)||(3323693-3323755)
chr3 (245-292)||(1309832-1309878)
chr3 (206-265)||(458483-458543)
chr3 (206-265)||(6063444-6063504)
chr3 (206-265)||(10621528-10621588)
chr3 (29-88)||(21711454-21711511)
chr3 (29-88)||(23410529-23410586)
chr3 (12-91)||(32143552-32143629)
chr3 (222-269)||(39153357-39153405)
chr3 (222-273)||(44331669-44331721)
chr3 (32-91)||(47923704-47923761)
[»] chr1 (46 HSPs)
chr1 (10-371)||(41398140-41398497)
chr1 (10-373)||(41390483-41390842)
chr1 (27-373)||(25444931-25445277)
chr1 (27-373)||(39445397-39445742)
chr1 (27-373)||(44023716-44024060)
chr1 (27-370)||(1054854-1055196)
chr1 (40-287)||(43988314-43988566)
chr1 (91-371)||(24787280-24787559)
chr1 (91-373)||(24202686-24202964)
chr1 (27-165)||(25439738-25439875)
chr1 (91-306)||(19358760-19358975)
chr1 (91-306)||(19361349-19361564)
chr1 (91-306)||(19379989-19380204)
chr1 (12-90)||(24787148-24787226)
chr1 (145-269)||(26644869-26644994)
chr1 (184-270)||(47703946-47704034)
chr1 (12-91)||(24202556-24202635)
chr1 (175-269)||(19072928-19073025)
chr1 (175-269)||(19120818-19120915)
chr1 (93-269)||(3281708-3281885)
chr1 (175-270)||(16124516-16124614)
chr1 (175-270)||(27104372-27104470)
chr1 (184-270)||(9476260-9476348)
chr1 (184-270)||(13598397-13598485)
chr1 (184-270)||(29651810-29651898)
chr1 (177-269)||(37069770-37069864)
chr1 (184-270)||(775671-775759)
chr1 (145-269)||(21536541-21536666)
chr1 (187-270)||(47098837-47098922)
chr1 (175-269)||(13604624-13604720)
chr1 (12-91)||(19366095-19366174)
chr1 (187-270)||(32889438-32889523)
chr1 (12-91)||(19361220-19361298)
chr1 (206-266)||(47102874-47102935)
chr1 (206-265)||(9459419-9459479)
chr1 (206-265)||(9463246-9463306)
chr1 (206-265)||(16226386-16226446)
chr1 (12-91)||(19358631-19358709)
chr1 (91-158)||(19366225-19366292)
chr1 (29-91)||(47098633-47098693)
chr1 (29-91)||(47102647-47102707)
chr1 (30-91)||(3281936-3281995)
chr1 (12-91)||(13604413-13604490)
chr1 (206-265)||(23786058-23786118)
chr1 (30-89)||(37069998-37070055)
chr1 (206-265)||(51752582-51752642)
[»] scaffold0355 (3 HSPs)
scaffold0355 (56-373)||(9514-9827)
scaffold0355 (10-183)||(3672-3845)
scaffold0355 (327-372)||(28-73)
[»] scaffold0464 (1 HSPs)
scaffold0464 (27-373)||(260-605)
[»] scaffold0197 (2 HSPs)
scaffold0197 (40-307)||(14161-14433)
scaffold0197 (40-371)||(19017-19350)
[»] scaffold0259 (1 HSPs)
scaffold0259 (40-371)||(2103-2436)
[»] scaffold0028 (1 HSPs)
scaffold0028 (40-371)||(148808-149141)
[»] scaffold0188 (4 HSPs)
scaffold0188 (91-371)||(17869-18147)
scaffold0188 (91-292)||(23962-24164)
scaffold0188 (12-91)||(17739-17818)
scaffold0188 (12-91)||(23832-23911)
[»] scaffold0009 (2 HSPs)
scaffold0009 (197-307)||(181976-182088)
scaffold0009 (40-134)||(176829-176925)
[»] scaffold0140 (4 HSPs)
scaffold0140 (175-269)||(8420-8516)
scaffold0140 (12-91)||(8208-8285)
scaffold0140 (206-265)||(22343-22403)
scaffold0140 (206-265)||(24618-24678)
[»] scaffold0036 (1 HSPs)
scaffold0036 (175-268)||(85684-85779)
[»] scaffold0087 (3 HSPs)
scaffold0087 (158-269)||(43945-44058)
scaffold0087 (145-269)||(36804-36929)
scaffold0087 (29-91)||(36640-36700)
[»] scaffold0006 (4 HSPs)
scaffold0006 (184-270)||(5682-5770)
scaffold0006 (184-270)||(2491-2579)
scaffold0006 (175-269)||(133281-133377)
scaffold0006 (12-91)||(133070-133147)
[»] scaffold0148 (1 HSPs)
scaffold0148 (175-270)||(10728-10826)
[»] scaffold0978 (1 HSPs)
scaffold0978 (237-371)||(300-431)
[»] scaffold0098 (1 HSPs)
scaffold0098 (187-269)||(45253-45337)
[»] scaffold0176 (1 HSPs)
scaffold0176 (175-266)||(17266-17360)
[»] scaffold0267 (1 HSPs)
scaffold0267 (206-265)||(269-329)
[»] scaffold0154 (1 HSPs)
scaffold0154 (206-239)||(11500-11533)
[»] scaffold0025 (1 HSPs)
scaffold0025 (206-265)||(69292-69352)


Alignment Details
Target: chr5 (Bit Score: 315; Significance: 1e-177; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 10 - 371
Target Start/End: Complemental strand, 15044947 - 15044586
Alignment:
Q  10 agcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggtt-gggaaaaacattgtaatcaccttgggttttagggttcatagtgt 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  15044947 agcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggtttgggaaaaacattgtaatcaccttgggttttagggttcatagtgt 15044848  T
Q  109 gagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagtcttgtaaccttttgtaacactttcacatattgg 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15044847 gagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagtcttgtaaccttttgtaacactttctcatattgg 15044748  T
Q  209 attggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttcttccttttaccgcttatcttgtt 308  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||   ||||||||||||    
T  15044747 attggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaatctt-cttggtgttttgttcttccttttcttgcttatcttgtt 15044649  T
Q  309 tatgctttggaatctcttgtgtggttttgctatacactagcttagggctgttttgttgttgtt 371  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  15044648 tatgctttggaatctcttgtgtggttttgctatacactagtctagggctgttttgttgttgtt 15044586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 10 - 373
Target Start/End: Complemental strand, 43592540 - 43592176
Alignment:
Q  10 agcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |    
T  43592540 agcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattaag 43592441  T
Q  110 agagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagag-tcttgtaaccttttgtaacactttcacatattgg 208  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||    
T  43592440 agagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattgg 43592341  T
Q  209 attggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttcttccttttaccgcttatcttgtt 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||| | |||||||||||    
T  43592340 attggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttcttccttttatcacttatcttgtt 43592242  T
Q  309 tatgctttggaatctc-ttgtgtggttttgctatacactagcttagggctgttttgttgttgtttg 373  Q
    |||||||||  ||||| ||||||||||||||||||||||||  |||||||| ||||||||||||||    
T  43592241 tatgctttgttatctctttgtgtggttttgctatacactagtctagggctgctttgttgttgtttg 43592176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 10 - 373
Target Start/End: Complemental strand, 27450075 - 27449711
Alignment:
Q  10 agcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |    
T  27450075 agcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattaag 27449976  T
Q  110 agagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagag-tcttgtaaccttttgtaacactttcacatattgg 208  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||    
T  27449975 agagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattgg 27449876  T
Q  209 attggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttcttccttttaccgcttatcttgtt 308  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  | ||||||||||||||||||||| | |||||||||||    
T  27449875 attggagagctgctctctcccccagattaggctatattggctgaactgggtcaacaatctt-ctcggtgttttgttcttccttttatcacttatcttgtt 27449777  T
Q  309 tatgctttggaatctc-ttgtgtggttttgctatacactagcttagggctgttttgttgttgtttg 373  Q
    |||||||||  ||||| ||||||||||||||||||||||||  |||||||| | ||||||||||||    
T  27449776 tatgctttgttatctctttgtgtggttttgctatacactagtctagggctgctatgttgttgtttg 27449711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 10 - 373
Target Start/End: Complemental strand, 43598985 - 43598621
Alignment:
Q  10 agcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |    
T  43598985 agcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattaag 43598886  T
Q  110 agagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagag-tcttgtaaccttttgtaacactttcacatattgg 208  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||    
T  43598885 agagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattgg 43598786  T
Q  209 attggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttcttccttttaccgcttatcttgtt 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||  | ||||||||||||||||||||| | |||||||||||    
T  43598785 attggagagctgctctctcccccagattaggccatattggctgaactggaccaacaatctt-ctcggtgttttgttcttccttttatcacttatcttgtt 43598687  T
Q  309 tatgctttggaatctc-ttgtgtggttttgctatacactagcttagggctgttttgttgttgtttg 373  Q
    |||||||||  ||||| ||||||||||||||||||||||||  |||||||| ||||||||||||||    
T  43598686 tatgctttgttatctctttgtgtggttttgctatacactagtctagggctgctttgttgttgtttg 43598621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 10 - 373
Target Start/End: Complemental strand, 43604477 - 43604113
Alignment:
Q  10 agcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |    
T  43604477 agcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattaag 43604378  T
Q  110 agagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagag-tcttgtaaccttttgtaacactttcacatattgg 208  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||    
T  43604377 agagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattgg 43604278  T
Q  209 attggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttcttccttttaccgcttatcttgtt 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||  | ||||||||||||||||||||| | |||||||||||    
T  43604277 attggagagctgctctctcccccagattaggccatattggctgaactggaccaacaatctt-ctcggtgttttgttcttccttttatcacttatcttgtt 43604179  T
Q  309 tatgctttggaatctc-ttgtgtggttttgctatacactagcttagggctgttttgttgttgtttg 373  Q
    |||||||||  ||||| ||||||||||||||||||||||||  |||||||| ||||||||||||||    
T  43604178 tatgctttgttatctctttgtgtggttttgctatacactagtctagggctgctttgttgttgtttg 43604113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 10 - 373
Target Start/End: Complemental strand, 43609969 - 43609605
Alignment:
Q  10 agcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |    
T  43609969 agcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattaag 43609870  T
Q  110 agagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagag-tcttgtaaccttttgtaacactttcacatattgg 208  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||    
T  43609869 agagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattgg 43609770  T
Q  209 attggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttcttccttttaccgcttatcttgtt 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||  | ||||||||||||||||||||| | |||||||||||    
T  43609769 attggagagctgctctctcccccagattaggccatattggctgaactggaccaacaatctt-ctcggtgttttgttcttccttttatcacttatcttgtt 43609671  T
Q  309 tatgctttggaatctc-ttgtgtggttttgctatacactagcttagggctgttttgttgttgtttg 373  Q
    |||||||||  ||||| ||||||||||||||||||||||||  |||||||| ||||||||||||||    
T  43609670 tatgctttgttatctctttgtgtggttttgctatacactagtctagggctgctttgttgttgtttg 43609605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 10 - 373
Target Start/End: Original strand, 1456986 - 1457349
Alignment:
Q  10 agcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  1456986 agcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattgtg 1457085  T
Q  110 agagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagag-tcttgtaaccttttgtaacactttcacatattgg 208  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||    
T  1457086 agagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattgg 1457185  T
Q  209 attggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttcttccttttaccgcttatcttgtt 308  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  | |||||||||||||||| |||    |||||||||||    
T  1457186 attggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatctt-ctcggtgttttgttcttcc-tttctttcttatcttgtt 1457283  T
Q  309 tatgctttggaatctc-ttgtgtggttttgctatacactagcttagggctgttttgttgttgtttg 373  Q
    |||||||||  ||||| ||||||||||||||||||||||||  |||||||| ||||||||||||||    
T  1457284 tatgctttgttatctctttgtgtggttttgctatacactagtctagggctgctttgttgttgtttg 1457349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 10 - 373
Target Start/End: Complemental strand, 27445231 - 27444867
Alignment:
Q  10 agcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |    
T  27445231 agcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattaag 27445132  T
Q  110 agagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagag-tcttgtaaccttttgtaacactttcacatattgg 208  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||    
T  27445131 agagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattgg 27445032  T
Q  209 attggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttcttccttttaccgcttatcttgtt 308  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||  | ||||||||||||||||||||| | |||||||||||    
T  27445031 attggagagctgctctctcccccagattaggctatattgcctgaactgggtcaacaatctt-ctcggtgttttgttcttccttttatcacttatcttgtt 27444933  T
Q  309 tatgctttggaatctc-ttgtgtggttttgctatacactagcttagggctgttttgttgttgtttg 373  Q
    |||||||||  ||||| ||||||||||||||||||||||||  |||||||| | ||||||||||||    
T  27444932 tatgctttgttatctctttgtgtggttttgctatacactagtctagggctgctatgttgttgtttg 27444867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 40 - 373
Target Start/End: Original strand, 28807429 - 28807762
Alignment:
Q  40 ctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatct 139  Q
    ||||| ||||||||| |||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||    
T  28807429 ctttgatgagagtgtttcttaggttgggaaaaacattgtaatcaccttgggattttgggttcatagtgtgagagtgggaaaataccaaagggtaga-tct 28807527  T
Q  140 agggtttgttcatgtgtaaagcttgaaagctagagtcttgtaaccttttgtaacactttcacatattggattggagagctgctctctcccccagattagg 239  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  28807528 agggtttgttcatgtgtaaagcttgaaagctagattcttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccagattagg 28807626  T
Q  240 ccatattggctgaactgggtcaacaatcttgtttggtgttttgttc-ttccttttaccgcttatcttgtttatgctttggaatctc-ttgtgtgg--ttt 335  Q
    ||| ||||||||||||||||||||||||||| | |||||||||||| |||||||||||| ||||||||||||||| |||  | ||| ||| ||||  |||    
T  28807627 ccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgc-ttgttagctctttgagtggttttt 28807725  T
Q  336 tgctatacactagcttagggctgttttgttgttgtttg 373  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  28807726 tgctatacactagcttagggctg-tttgttgttgtttg 28807762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 40 - 371
Target Start/End: Original strand, 37556478 - 37556809
Alignment:
Q  40 ctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatct 139  Q
    ||||| || |||||| |||| ||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||  |||    
T  37556478 ctttgatgtgagtgtttcttaggttgggaaaa-cattgtaatcaccttgggattttgggttcatagtgtgagagtgggaaaataccaaagggtagt-tct 37556575  T
Q  140 agggtttgttcatgtgtaaagcttga-aagctagagtcttgtaaccttttgtaacactttcacatattggattggagagctgctctctcccccagattag 238  Q
    |||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37556576 agggtttgttcatgtgtaaagcttgataagctagatacttgtaaccttttgtaacactttcacatattggattggagagctgctctctcccccagattag 37556675  T
Q  239 gccatattggctgaactgggtcaacaatcttgtttggtgttttgttctt-ccttttaccgcttatcttgtttatgctttggaatctctt-gtgtggtttt 336  Q
    |||| ||||||||||||||||||||||||||| | |||||||||||||| || ||||||| ||||||||||||||||| |  | ||||| ||||||||||    
T  37556676 gccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccatttaccgtttatcttgtttatgctt-gttagctcttagtgtggtttt 37556774  T
Q  337 gctatacactag-cttagggctgttttgttgttgtt 371  Q
    ||||||||| || | || ||||||||||||||||||    
T  37556775 gctatacacaagtcata-ggctgttttgttgttgtt 37556809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 40 - 371
Target Start/End: Original strand, 37561300 - 37561631
Alignment:
Q  40 ctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatct 139  Q
    ||||| || |||||| |||| ||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||  |||    
T  37561300 ctttgatgtgagtgtttcttaggttgggaaaa-cattgtaatcaccttgggattttgggttcatagtgtgagagtgggaaaataccaaagggtagt-tct 37561397  T
Q  140 agggtttgttcatgtgtaaagcttga-aagctagagtcttgtaaccttttgtaacactttcacatattggattggagagctgctctctcccccagattag 238  Q
    |||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37561398 agggtttgttcatgtgtaaagcttgataagctagatacttgtaaccttttgtaacactttcacatattggattggagagctgctctctcccccagattag 37561497  T
Q  239 gccatattggctgaactgggtcaacaatcttgtttggtgttttgttctt-ccttttaccgcttatcttgtttatgctttggaatctctt-gtgtggtttt 336  Q
    |||| ||||||||||||||||||||||||||| | |||||||||||||| || ||||||| ||||||||||||||||| |  | ||||| ||||||||||    
T  37561498 gccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccatttaccgtttatcttgtttatgctt-gttagctcttagtgtggtttt 37561596  T
Q  337 gctatacactag-cttagggctgttttgttgttgtt 371  Q
    ||||||||| || | || ||||||||||||||||||    
T  37561597 gctatacacaagtcata-ggctgttttgttgttgtt 37561631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 92 - 371
Target Start/End: Complemental strand, 30631586 - 30631306
Alignment:
Q  92 tttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagt--cttgtaaccttttg 189  Q
    ||||||||||||| |||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||  ||||||||| ||||    
T  30631586 tttagggttcatattgtgagagtggggaaacaccaaagggtagaatctatggtttgttcatgtgtaaagcttgaaggctagagtttcttgtaaccctttg 30631487  T
Q  190 taacactttcacatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttcttcc 289  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||  ||||||||||||||||||    
T  30631486 taacactttctcatattggattggagagctgctctctcccccagattaggccacattggctgaactgagtcaacaatctt-cttggtgttttgttcttcc 30631388  T
Q  290 tt--ttaccgcttatcttgtttatgctttggaatctct-tgtgtggttttgctatacactagcttagggctgttttgttgttgtt 371  Q
    ||  |||   ||||||||||||||||||||  |||| | | |||| ||||||||||||||||  |||||||||||||||||||||    
T  30631387 tttctta---cttatcttgtttatgctttgttatctatatatgtgattttgctatacactagtctagggctgttttgttgttgtt 30631306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 40 - 371
Target Start/End: Complemental strand, 2785608 - 2785275
Alignment:
Q  40 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtagaat 137  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||  |||||||||||||||| ||||||||||||||||||||||  |    
T  2785608 ctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgagggtgggaaaataccaaagggtagg-t 2785510  T
Q  138 ctagggtttgttcatgtgtaaagcttgaaa-gctagagtcttgtaac-cttttgtaacactttcacatattggattggagagctgctctctcccccagat 235  Q
    |||||||||||||||| ||||||||||||| |||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  2785509 ctagggtttgttcatgagtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccagat 2785410  T
Q  236 taggccatattggctgaactgggtcaacaatcttgtttggtgttttgttc--ttccttttaccgcttatcttgtttatgctttggaatctctt-gtgtgg 332  Q
    ||||||| ||||||||||||||||||||||||||| | |||| |||||||  ||||||||| || ||||||||  ||||| |||  | ||||| ||||||    
T  2785409 taggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttccttttatcgtttatcttg--tatgc-ttgttagctcttagtgtgg 2785314  T
Q  333 ttttgctatacacta-gcttagggctgttttgttgttgtt 371  Q
    |||||||||||| || ||||| ||||||||||||||||||    
T  2785313 ttttgctatacattaggctta-ggctgttttgttgttgtt 2785275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 40 - 371
Target Start/End: Complemental strand, 33791549 - 33791216
Alignment:
Q  40 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtagaat 137  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||  |||||||||||||||| ||||||||||||||||||||||  |    
T  33791549 ctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgagggtgggaaaataccaaagggtagg-t 33791451  T
Q  138 ctagggtttgttcatgtgtaaagcttgaaa-gctagagtcttgtaac-cttttgtaacactttcacatattggattggagagctgctctctcccccagat 235  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  33791450 ctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctctttcccccagat 33791351  T
Q  236 taggccatattggctgaactgggtcaacaatcttgtttggtgttttgttc--ttccttttaccgcttatcttgtttatgctttggaatctct-tgtgtgg 332  Q
    ||||||| ||||||||||||||||||||||||||| | |||| |||||||  ||||||||| || ||||||||  ||||| |||  | |||| | |||||    
T  33791350 taggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttccttttatcgtttatcttg--tatgc-ttgttagctctatatgtgg 33791255  T
Q  333 ttttgctatacacta-gcttagggctgttttgttgttgtt 371  Q
    |||||||||||| || ||||| ||||||||||||||||||    
T  33791254 ttttgctatacattaggctta-ggctgttttgttgttgtt 33791216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 91 - 347
Target Start/End: Complemental strand, 31180394 - 31180138
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagt--cttgtaacctttt 188  Q
    ||||| |||||||| |||||||||||| ||| |||||||||||||||||||||||||| | ||||||||||||||| ||||||||  ||||||||| |||    
T  31180394 ttttatggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgt-cttgtgtaaagcttgaaggctagagtttcttgtaacccttt 31180296  T
Q  189 gtaacactttcacatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttcttc 288  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||     
T  31180295 gtaacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-cttggtgttttgttcttt 31180197  T
Q  289 cttttaccgcttatcttgtttatgctttggaatctc-ttgtgtggttttgctatacacta 347  Q
    | |||    ||||||||||||||||||||  ||||| |||||||||||||||||||||||    
T  31180196 c-tttctttcttatcttgtttatgctttgttatctctttgtgtggttttgctatacacta 31180138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 40 - 280
Target Start/End: Original strand, 31396843 - 31397088
Alignment:
Q  40 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtagaat 137  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||  ||||||||||||||||  ||||||||| |||||||||||| |    
T  31396843 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgaggatgggaaaatgccaaagggtaga-t 31396941  T
Q  138 ctagggtttgtt--catgtgtaaagcttga-aagctagagtcttgtaac-cttttgtaacactttcacatattggattggagagctgctctctcccccag 233  Q
    ||||||||| ||  | |||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  31396942 ctagggttttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccag 31397041  T
Q  234 attaggccatattggctgaactgggtcaacaatcttgtttggtgttt 280  Q
    ||||||||| ||||||||||||||||||||||||||| | |||||||    
T  31397042 attaggccacattggctgaactgggtcaacaatcttgctcggtgttt 31397088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 40 - 371
Target Start/End: Original strand, 31401700 - 31402035
Alignment:
Q  40 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtagaat 137  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||  ||||||||||||||||  ||||||||| |||||||||||| |    
T  31401700 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgaggatgggaaaatgccaaagggtaga-t 31401798  T
Q  138 ctagggtttgtt--catgtgtaaagcttga-aagctagagtcttgtaac-cttttgtaacactttcacatattggattggagagctgctctctcccccag 233  Q
    |||| |||| ||  | |||||||||||||| |||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||     
T  31401799 ctagagttttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccat 31401898  T
Q  234 attaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttc--ttccttttaccgcttatcttgtttatgctttggaatctctt-gtgt 330  Q
    ||||||||| ||||||||||||||||||||||||||| | |||| |||||||  || |||||| || ||||||||  ||||| |||  | ||||| ||||    
T  31401899 attaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcgttttcttttatcgtttatcttg--tatgc-ttgttagctcttagtgt 31401994  T
Q  331 ggttttgctatacacta-gcttagggctgttttgttgttgtt 371  Q
    ||||||||| |||| || ||||| ||||||||||||||||||    
T  31401995 ggttttgctttacattaggctta-ggctgttttgttgttgtt 31402035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 91 - 371
Target Start/End: Complemental strand, 38192353 - 38192074
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagt-cttgtaaccttttg 189  Q
    |||||||||||||| |||||||||||| ||| || || |||||||| |||||  |||||| ||||||| ||||| ||||||   | ||||||||| ||||    
T  38192353 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaaactaggacttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttg 38192255  T
Q  190 taacactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgt-tttgttctt 287  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  38192254 taacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-tttggtgtgtttgttctt 38192156  T
Q  288 ccttttaccgcttatcttgtttatgctttggaatctcttgtgtggttttgctatacactagcttagggctg-ttttgttgttgtt 371  Q
    |||||    |||||||||||||  |||||| | ||||||||||||| ||||| ||||||||  |||||||| |||||||||||||    
T  38192155 cctttctt-gcttatcttgttt--gctttgtattctcttgtgtggtgttgctctacactagtctagggctgtttttgttgttgtt 38192074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 91 - 371
Target Start/End: Complemental strand, 38219578 - 38219299
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagt-cttgtaaccttttg 189  Q
    |||||||||||||| |||||||||||| ||| || || |||||||| |||||  |||||| ||||||| ||||| ||||||   | ||||||||| ||||    
T  38219578 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaaactaggacttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttg 38219480  T
Q  190 taacactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgt-tttgttctt 287  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  38219479 taacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-tttggtgtgtttgttctt 38219381  T
Q  288 ccttttaccgcttatcttgtttatgctttggaatctcttgtgtggttttgctatacactagcttagggctg-ttttgttgttgtt 371  Q
    |||||    |||||||||||||  |||||| | ||||||||||||| ||||| ||||||||  |||||||| |||||||||||||    
T  38219380 cctttctt-gcttatcttgttt--gctttgtattctcttgtgtggtgttgctctacactagtctagggctgtttttgttgttgtt 38219299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 40 - 371
Target Start/End: Complemental strand, 33768417 - 33768079
Alignment:
Q  40 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatagtgtga--gagt-gggaaaatacc--aaagggt 132  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||   |||||||||||||   | || ||||||||| |  |||||||    
T  33768417 ctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggattattggttcatagtgtggaggggtagggaaaataaccgaaagggt 33768318  T
Q  133 agaatctagggtttgttcatgtgtaaagcttgaaa-gctagagtcttgtaac-cttttgtaacactttcacatattggattggagagctgctctctcccc 230  Q
    ||  ||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||    
T  33768317 agg-tctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctctcccccc 33768219  T
Q  231 cagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttc--ttccttttaccgcttatcttgtttatgctttggaatctct-tg 327  Q
    |||||||||||| ||||||||||||||||||||||||||| | |||| |||||||  ||||||||| || ||||| ||  ||||| |||  | |||| |     
T  33768218 cagattaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttccttttatcgtttatcctg--tatgc-ttgttagctctata 33768123  T
Q  328 tgtggttttgctatacacta-gcttagggctgttttgttgttgtt 371  Q
    ||||||||||||||||| || ||||| ||||||||||||||||||    
T  33768122 tgtggttttgctatacattaggctta-ggctgttttgttgttgtt 33768079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 91 - 373
Target Start/End: Complemental strand, 24136028 - 24135749
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagcta-gagtcttgtaaccttttg 189  Q
    |||||||||||| | |||||||||||| ||| ||||||||||||||||||||  |||||| ||||| ||||||| ||||||    |||||||||| ||||    
T  24136028 ttttagggttcacattgtgagagtggggaaacaccaaagggtagaatctaggacttgttcttgtgt-aagcttgcaagctatttttcttgtaaccctttg 24135930  T
Q  190 taacactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgt-tttgttctt 287  Q
    ||||||||||| | || || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||    
T  24135929 taacactttcatcttagtgcattggatagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-cttggtgtgtttgttctt 24135831  T
Q  288 ccttttaccgcttatcttgtttatgctttggaatctcttgtgtggttttgctatacactagcttagggctgttttgttgttgtttg 373  Q
    ||||||   ||||||||||||  ||||||| | | |||  |||||| ||||| ||||||||  |||||||||||||||||||||||    
T  24135830 ccttttctagcttatcttgtt--tgctttgtattatct--tgtggtgttgctctacactagtctagggctgttttgttgttgtttg 24135749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 91 - 292
Target Start/End: Complemental strand, 35387842 - 35387640
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagcta-gagtcttgtaaccttttg 189  Q
    |||||||||||||| |||||||||||| ||| || || |||||||| |||||  || ||| ||||| ||||||| ||||||    |||||||||| ||||    
T  35387842 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaaactaggacttattcttgtgt-aagcttgcaagctatttttcttgtaaccctttg 35387744  T
Q  190 taacactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgt-tttgttctt 287  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||    
T  35387743 taacactttcatcatagtagattggagagctgctctctcccccagattaggccatattggctgaattgggtcaacaatctt-tttggtgtgtttgttctt 35387645  T
Q  288 ccttt 292  Q
    |||||    
T  35387644 ccttt 35387640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 30631719 - 30631640
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30631719 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 30631640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 31180526 - 31180447
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31180526 caaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 31180447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 24136159 - 24136080
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  24136159 caaaggagggaaccaaagggttgagtgtctttgtagaaagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 24136080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 175 - 269
Target Start/End: Original strand, 9353333 - 9353429
Alignment:
Q  175 tcttgtaaccttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 269  Q
    |||||||||  ||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  9353333 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 9353429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 175 - 269
Target Start/End: Original strand, 36932351 - 36932447
Alignment:
Q  175 tcttgtaaccttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 269  Q
    |||||||||  ||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  36932351 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 36932447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 145 - 269
Target Start/End: Complemental strand, 10281877 - 10281751
Alignment:
Q  145 ttgttcatgtgtaaagcttgaaagctagagtcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggcca 242  Q
    |||||| ||||||| ||||| ||||||   ||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||| ||    
T  10281877 ttgttcttgtgtaa-gcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcccccagatcaggtca 10281779  T
Q  243 tattgg-ctgaactgggtcaacaatctt 269  Q
    |||||| | |||||||||||||||||||    
T  10281778 tattggaccgaactgggtcaacaatctt 10281751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 91 - 269
Target Start/End: Complemental strand, 15464712 - 15464532
Alignment:
Q  91 ttttagggttcat-agtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagt-cttgtaacctttt 188  Q
    ||||||||||||| | |||||||||||||||  || || ||||||||  ||||  |||||| ||||||| ||||| ||||||   | ||||||||  |||    
T  15464712 ttttagggttcattattgtgagagtgggaaac-acaaatgggtagaaattaggtcttgttcttgtgtaa-gcttgcaagctatttttcttgtaactcttt 15464615  T
Q  189 gtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 269  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||  |||||||| | |||||||||||||||||||    
T  15464614 gtaacactttcatcatagtggattggagagctgctctctcccccagattagatcatattggaccgaactgggtcaacaatctt 15464532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 175 - 268
Target Start/End: Original strand, 11916972 - 11917068
Alignment:
Q  175 tcttgtaac-cttttgtaacactttcac-atattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatct 268  Q
    ||||||||| |||||||||||||||||  ||| ||||||||||||||||||||||||||| |||||| |||||||| | ||||||||||||||||||    
T  11916972 tcttgtaactcttttgtaacactttcattatagtggattggagagctgctctctcccccatattaggtcatattggaccgaactgggtcaacaatct 11917068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 35387972 - 35387893
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||    ||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||    
T  35387972 caaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttggaaaaaacattgtaatcaccttgggt 35387893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 145 - 269
Target Start/End: Complemental strand, 14520355 - 14520230
Alignment:
Q  145 ttgttcatgtgtaaagcttgaaagctagagtcttgtaaccttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccat 243  Q
    |||||| ||||||| ||||| ||||||   |||||||||  ||||||||||||||| |||| ||||||| |||||||||||| |||| |||||||| |||    
T  14520355 ttgttcttgtgtaa-gcttgcaagctattttcttgtaactctttgtaacactttcatcatagtggattgaagagctgctctcccccctagattaggtcat 14520257  T
Q  244 attgg-ctgaactgggtcaacaatctt 269  Q
    ||||| | |||||||||||||||||||    
T  14520256 attggaccgaactgggtcaacaatctt 14520230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 184 - 270
Target Start/End: Original strand, 17003970 - 17004058
Alignment:
Q  184 cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    |||||| || ||||||| |||| ||||||| |||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||    
T  17003970 cttttgaaatactttcatcatagtggattgaagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttg 17004058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 175 - 270
Target Start/End: Complemental strand, 3880396 - 3880298
Alignment:
Q  175 tcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    ||||||||| ||||||||||||||||| |||| ||||||||||||||||||||| || ||||||||| |||||||| | ||||||  ||||||||||||    
T  3880396 tcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctgcctcagattaggtcatattggacagaactgaatcaacaatcttg 3880298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 175 - 266
Target Start/End: Original strand, 12084176 - 12084269
Alignment:
Q  175 tcttgtaaccttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaat 266  Q
    |||||||||  ||||||||||||||| |||| ||||||||||||||||||||| ||||| |||||| |||| ||| | ||||||||||||||||    
T  12084176 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctgccccatattaggtcatagtggaccgaactgggtcaacaat 12084269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 175 - 269
Target Start/End: Complemental strand, 19588843 - 19588746
Alignment:
Q  175 tcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 269  Q
    ||||||||| ||||||||||||||||| |||| |||||||||| |||||||||||||  |||||||  |||||||| | |||||||||||||||||||    
T  19588843 tcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctccctaagattagttcatattggaccgaactgggtcaacaatctt 19588746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 187 - 270
Target Start/End: Complemental strand, 28832343 - 28832258
Alignment:
Q  187 ttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    |||||||||||||| | || |||||||||| ||||||||||||||||||||||| |||||||| | |||| |||||||||||||||    
T  28832343 ttgtaacactttcatcttagtggattggagggctgctctctcccccagattaggtcatattggaccgaaccgggtcaacaatcttg 28832258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 38219708 - 38219629
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||    ||||||||||||||||| | |||  ||||||||||||||||||||||||||| ||||||||||    
T  38219708 caaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgggaaaaacattgtaaacaccttgggt 38219629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 187 - 270
Target Start/End: Original strand, 42127423 - 42127508
Alignment:
Q  187 ttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattggct-gaactgggtcaacaatcttg 270  Q
    |||||||||||||| | || |||||||| | ||||||||||||||||||||||| |||||| | | ||||||||||||||||||||    
T  42127423 ttgtaacactttcatcttagtggattggggggctgctctctcccccagattaggtcatattagatcgaactgggtcaacaatcttg 42127508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 4410241 - 4410301
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    ||||||||||||||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  4410241 tggattggagagctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 4410301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 270
Target Start/End: Original strand, 31300612 - 31300694
Alignment:
Q  190 taacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    ||||||||||| | || |||||||||||| | ||||||||| |||| |||| |||||||| | ||||||||||||||||||||    
T  31300612 taacactttcatcttagtggattggagagtttctctctccctcagactaggtcatattggaccgaactgggtcaacaatcttg 31300694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 15552464 - 15552524
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  15552464 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 15552524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 24553318 - 24553395
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    ||||||||| |||  | ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  24553318 caaaggaggtaacttaagggttgagtgtctttgtagtgaggttctcttgggttggg--aaacattgtaaacaccttgggt 24553395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 31179431 - 31179371
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  31179431 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 31179371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 31542953 - 31543013
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  31542953 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 31543013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 31545299 - 31545359
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  31545299 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 31545359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 11181641 - 11181700
Alignment:
Q  30 ggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  11181641 ggttgagtgtctttgtagtgaggttctcttgggttggg--aaacattgtaaacaccttgggt 11181700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 265
Target Start/End: Original strand, 27910675 - 27910729
Alignment:
Q  212 ggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    |||||||||||||||||||||||||||| ||  |||| | |||||||||||||||    
T  27910675 ggagagctgctctctcccccagattaggtcaatttggaccgaactgggtcaacaa 27910729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 7160712 - 7160770
Alignment:
Q  29 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 89  Q
    ||||||||||||||||| | |||  |||||||| |||||  ||||||||||||||||||||    
T  7160712 gggttgagtgtctttgtagtgaggttctcttggattggg--aaacattgtaatcaccttgg 7160770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 14520519 - 14520461
Alignment:
Q  29 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 89  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||    
T  14520519 gggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgg 14520461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 270
Target Start/End: Original strand, 24553520 - 24553604
Alignment:
Q  187 ttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    |||||||||||||| | || |||| ||||| |||||||||||||  |||||||| |||||||| | ||||||| ||||||||||||    
T  24553520 ttgtaacactttcatcttagtggagtggag-gctgctctctcccatagattaggtcatattggaccgaactggatcaacaatcttg 24553604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 28832544 - 28832486
Alignment:
Q  31 gttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    ||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  28832544 gttgagtgtctttgtagtgaggttctcttgggttggg--aaacattgtaaacaccttgggt 28832486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 3373197 - 3373137
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    |||||||||| | |||||||||||||||| |||| || ||||| | |||||||||||||||    
T  3373197 tggattggagggttgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 3373137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 10749919 - 10749979
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  10749919 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 10749979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 15354635 - 15354575
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  15354635 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 15354575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 311; Significance: 1e-175; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 10 - 371
Target Start/End: Original strand, 39811812 - 39812173
Alignment:
Q  10 agcaaaggagggaaccaa-tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgt 108  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  39811812 agcaaaggagggaaccaaatgggttgagtgtctttgttgagagtgtctcttaggttgagaaaaacattgtaatcaccttgggttttagggttcatagtgt 39811911  T
Q  109 gagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagtcttgtaaccttttgtaacactttcacatattgg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  39811912 gagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtcttgtaaccttttgtaacactttctcatattgg 39812011  T
Q  209 attggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttcttccttttaccgcttatcttgtt 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  | |||||||||||||| ||||||||||||||||||||    
T  39812012 attggagagctgctctctcccccagattaggccatattggctgaactggttcaacaatctt-ctcggtgttttgttctttcttttaccgcttatcttgtt 39812110  T
Q  309 tatgctttggaatctcttgtgtggttttgctatacactagcttagggctgttttgttgttgtt 371  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39812111 tgtgctttggaatctcttgtgtggttttgctatacactagcttagggctgttttgttgttgtt 39812173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 27 - 371
Target Start/End: Complemental strand, 32247031 - 32246684
Alignment:
Q  27 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaatacca 126  Q
    ||||| || ||| ||||| ||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  32247031 atggggtgtgtgcctttgatgagagtgtttcttaggttgggaaaaacattgtaatcaccttgggatttagggttcatagtgtgagagtgggaaaatacca 32246932  T
Q  127 aagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagtcttgtaaccttttgtaacactttcacatattggattggagagctgctctct 226  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  32246931 aagggtataatctagggtttgttcatgtgtaaagcttgaaagctagagtcttgtaaccttttgtaacactttctcatattggattggagagctgctctct 32246832  T
Q  227 cccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttcttcc---ttttaccgcttatcttgtttatgctttggaatct 323  Q
    ||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||   ||||   |||||||||||||||||||||||||||    
T  32246831 cccccagattaggccatattggctgaacaaggtcaacaatcttgttcggtgttttgttcttcctttttttcttgcttatcttgtttatgctttggaatct 32246732  T
Q  324 cttgtgtggttttgctatacactagcttagggctgttttgttgttgtt 371  Q
    |||||||||||||||||||||||||  |||| ||||||||||||||||    
T  32246731 cttgtgtggttttgctatacactagtctaggactgttttgttgttgtt 32246684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 125 - 373
Target Start/End: Original strand, 44312563 - 44312811
Alignment:
Q  125 caaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagt-cttgtaaccttttgtaacactttcacatattggattggagagctgctc 223  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  44312563 caaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctc 44312662  T
Q  224 tctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttcttccttttaccgcttatcttgtttatgctttggaatct 323  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||| |||||||||||||| |||||||| ||||    
T  44312663 tctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttcttccttttatcgcttatcttgttt-tgctttggtatct 44312760  T
Q  324 c-ttgtgtggttttgctatacactagcttagggctgttttgttgttgtttg 373  Q
    | |||||||||||||||||||||| |  |||||| | ||||||||||||||    
T  44312761 ctttgtgtggttttgctatacacttgtctagggcggctttgttgttgtttg 44312811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 40 - 371
Target Start/End: Complemental strand, 19344655 - 19344320
Alignment:
Q  40 ctttgttgagagtgtctcttgggttgggaaaaaca---ttgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtagaa 136  Q
    ||||| ||||||||| |||| ||||||||||||||   |||||||||||||||| ||  |||||||||||||||| ||||||||||||||||||||||      
T  19344655 ctttgatgagagtgtttcttaggttgggaaaaacaacattgtaatcaccttgggattatgggttcatagtgtgagggtgggaaaataccaaagggtagg- 19344557  T
Q  137 tctagggtttgttcatgtgtaaagcttgaaa-gctagagtcttgtaac-cttttgtaacactttcacatattggattggagagctgctctctcccccaga 234  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  19344556 tctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccctaga 19344457  T
Q  235 ttaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttc--ttccttttaccgcttatcttgtttatgctttggaatctctt-gtgtg 331  Q
    |||||||| ||||||||||||||||||||||||||| | ||||||||||||  ||||||||| || ||||||||  ||||| |||  | ||||| |||||    
T  19344456 ttaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttcttttccttttatcgtttatcttg--tatgc-ttgttagctcttagtgtg 19344360  T
Q  332 gttttgctatacacta-gcttagggctgttttgttgttgtt 371  Q
    ||||||||||||| || ||||| ||||||||||||||||||    
T  19344359 gttttgctatacattaggctta-ggctgttttgttgttgtt 19344320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 40 - 371
Target Start/End: Complemental strand, 19349513 - 19349178
Alignment:
Q  40 ctttgttgagagtgtctcttgggttgggaaaaaca---ttgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtagaa 136  Q
    ||||| ||||||||| |||| ||||||||||||||   |||||||||||||||| ||  |||||||||||||||| ||||||||||||||||||||||      
T  19349513 ctttgatgagagtgtttcttaggttgggaaaaacaacattgtaatcaccttgggattatgggttcatagtgtgagggtgggaaaataccaaagggtagg- 19349415  T
Q  137 tctagggtttgttcatgtgtaaagcttgaaa-gctagagtcttgtaac-cttttgtaacactttcacatattggattggagagctgctctctcccccaga 234  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  19349414 tctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccctaga 19349315  T
Q  235 ttaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttc--ttccttttaccgcttatcttgtttatgctttggaatctctt-gtgtg 331  Q
    |||||||| ||||||||||||||||||||||||||| | ||||||||||||  ||||||||| || ||||||||  ||||| |||  | ||||| |||||    
T  19349314 ttaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttcttttccttttatcgtttatcttg--tatgc-ttgttagctcttagtgtg 19349218  T
Q  332 gttttgctatacacta-gcttagggctgttttgttgttgtt 371  Q
    ||||||||||||| || ||||| ||||||||||||||||||    
T  19349217 gttttgctatacattaggctta-ggctgttttgttgttgtt 19349178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 91 - 371
Target Start/End: Original strand, 11098843 - 11099124
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagt--cttgtaacctttt 188  Q
    |||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||| ||||||| ||||| ||||||  ||  ||||||||| |||    
T  11098843 ttttagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgttcttgtgtaa-gcttgcaagctattgtttcttgtaacccttt 11098941  T
Q  189 gtaacactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttctt 287  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  11098942 gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-cttggtgttttgttctt 11099040  T
Q  288 ccttttaccgcttatcttgtttatgctttggaatctc-ttgtgtggttttgctatacactagcttagggctg-ttttgttgttgtt 371  Q
    |||||   | |||||||||||| |||||||| ||||| ||||||||||||||| ||||||||  |||||||| |||||||||||||    
T  11099041 cctttcttc-cttatcttgttt-tgctttggtatctctttgtgtggttttgctctacactagtctagggctgtttttgttgttgtt 11099124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 91 - 373
Target Start/End: Complemental strand, 14291669 - 14291386
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagt--cttgtaacctttt 188  Q
    |||||||||||||| |||||||||||| ||| ||  | ||||||||||||||| |||||| ||||||| ||||||| ||||  ||  ||||||||| |||    
T  14291669 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaacccttt 14291571  T
Q  189 gtaacactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttctt 287  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  14291570 gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctt-ggtgttttgttctt 14291472  T
Q  288 ccttttaccgcttatcttgtttatgctttggaatctctt-gtgtggttttgctatacactagcttagggctg-ttttgttgttgtttg 373  Q
    |||||    ||||||||||||| |||||||  ||||||| ||||||||||||| |||| |||  |||||||| |||||||||||||||    
T  14291471 cctttctt-gcttatcttgttt-tgctttgttatctctttgtgtggttttgctctacattagtctagggctgtttttgttgttgtttg 14291386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 91 - 373
Target Start/End: Original strand, 9296317 - 9296600
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagt--cttgtaacctttt 188  Q
    |||||||||||||| |||||||||||| ||| ||  | ||||||||||||||| |||||| ||| ||| ||||||| ||||  ||  ||||||||| |||    
T  9296317 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtataa-gcttgaaggctattgtttcttgtaacccttt 9296415  T
Q  189 gtaacactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttctt 287  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  9296416 gtaacactttcatcatattggattggagagctgctctctcccccaaattaggccatattggctgaactgggtcaacaatcttctt-ggtgttttgttctt 9296514  T
Q  288 ccttttaccgcttatcttgtttatgctttggaatctctt-gtgtggttttgctatacactagcttagggctg-ttttgttgttgtttg 373  Q
    |||||    |||| |||||||| |||||||  ||||||| ||||||||||||| ||||||||  |||||||| |||||||||||||||    
T  9296515 cctttctt-gcttttcttgttt-tgctttgttatctctttgtgtggttttgctctacactagactagggctgtttttgttgttgtttg 9296600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 91 - 371
Target Start/End: Complemental strand, 25398675 - 25398396
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagt-cttgtaaccttttg 189  Q
    |||||||||||||| |||||||||||  ||| || || |||||||| |||||  |||||| ||||||| ||||| ||||||   | ||||||||| ||||    
T  25398675 ttttagggttcatattgtgagagtggagaaacacaaatgggtagaaactaggacttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttg 25398577  T
Q  190 taacactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgt-tttgttctt 287  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||    
T  25398576 taacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggctgaactgggtcaacaatctt-tttggtgtgtttgttctt 25398478  T
Q  288 ccttttaccgcttatcttgtttatgctttggaatctcttgtgtggttttgctatacactagcttagggctg-ttttgttgttgtt 371  Q
    |||||    |||||||||||||  |||||| | ||||||||||||| ||||| ||||||||  |||||||| |||||||||||||    
T  25398477 cctttctt-gcttatcttgttt--gctttgtattctcttgtgtggtgttgctctacactagtctagggctgtttttgttgttgtt 25398396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 91 - 371
Target Start/End: Complemental strand, 25403813 - 25403534
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagt-cttgtaaccttttg 189  Q
    |||||||||||||| |||||||||||  ||| || || |||||||| |||||  |||||| ||||||| ||||| ||||||   | ||||||||| ||||    
T  25403813 ttttagggttcatattgtgagagtggagaaacacaaatgggtagaaactaggacttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttg 25403715  T
Q  190 taacactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgt-tttgttctt 287  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||| |||||||||    
T  25403714 taacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggctgaactgagtcaacaatctt-tttggtgtgtttgttctt 25403616  T
Q  288 ccttttaccgcttatcttgtttatgctttggaatctcttgtgtggttttgctatacactagcttagggctg-ttttgttgttgtt 371  Q
    |||||    |||||||||||||  |||||| | ||||||||||||| ||||| ||||||||  |||||||| |||||||||||||    
T  25403615 cctttctt-gcttatcttgttt--gctttgtattctcttgtgtggtgttgctctacactagtctagggctgtttttgttgttgtt 25403534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 91 - 292
Target Start/End: Complemental strand, 3491930 - 3491729
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagcta-gagtcttgtaaccttttg 189  Q
    |||||||||||||| |||||||||||| ||| || || ||||||||||||||  |||||| ||||| ||||||| ||||||    |||||||||| ||||    
T  3491930 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgt-aagcttgcaagctatttttcttgtaaccctttg 3491832  T
Q  190 taacactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgt-tttgttctt 287  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||    
T  3491831 taacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatct--tttggtgtgtttgttctt 3491734  T
Q  288 ccttt 292  Q
    |||||    
T  3491733 ccttt 3491729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 11098711 - 11098790
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11098711 caaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 11098790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 184 - 270
Target Start/End: Complemental strand, 8040147 - 8040059
Alignment:
Q  184 cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  8040147 cttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggactgaactgggtcaacaatcttg 8040059  T

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Target: chr2; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 93 - 266
Target Start/End: Complemental strand, 13569506 - 13569331
Alignment:
Q  93 ttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagtcttgtaac-cttttgta 191  Q
    ||||| |||||| ||||||||||||  |  | ||||||||||||  ||||  |||||| |||||||| |||  ||||||   ||||||||| ||||||||    
T  13569506 ttaggattcatattgtgagagtgggtgacaaacaaagggtagaaattaggtcttgttcttgtgtaaa-cttataagctaatttcttgtaactcttttgta 13569408  T
Q  192 acactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaat 266  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||    
T  13569407 acactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaat 13569331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 187 - 292
Target Start/End: Complemental strand, 40738926 - 40738822
Alignment:
Q  187 ttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgt-tttgtt 284  Q
    |||||||||||||| |||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||  |||||||| ||||||    
T  40738926 ttgtaacactttcatcatagtggattggagagctgctctc-cccccagattaggtcatattggctgaactgggtcaacaatct--tttggtgtgtttgtt 40738830  T
Q  285 cttccttt 292  Q
    ||||||||    
T  40738829 cttccttt 40738822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 9296186 - 9296265
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||||| ||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||    
T  9296186 caaaggagggaaccaaagggttgagtgtctttgtagaaagtgtctattgggttgggaaaaacattgtaatcaccttgggt 9296265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 14291801 - 14291722
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||||| |||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  14291801 caaaggagggaaccaaagggttgagcgtctttgtagatagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 14291722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 91 - 239
Target Start/End: Complemental strand, 25407802 - 25407653
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagcta-gagtcttgtaaccttttg 189  Q
    |||||||||||||| |||||||||||  ||| || || |||||||| |||||  |||||| ||||| ||||||| ||||||    |||||||||| ||||    
T  25407802 ttttagggttcatattgtgagagtggagaaacacaaatgggtagaaactaggacttgttcttgtgt-aagcttgcaagctatttttcttgtaaccctttg 25407704  T
Q  190 taacactttca-catattggattggagagctgctctctcccccagattagg 239  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  25407703 taacactttcatcatagtggattggagagctgctctctcccccagattagg 25407653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 175 - 270
Target Start/End: Complemental strand, 21630040 - 21629943
Alignment:
Q  175 tcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    ||||||||| ||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||    
T  21630040 tcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctct-ccccagattaggtcatattggactgaactgggtcaacaatcttg 21629943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 145 - 269
Target Start/End: Original strand, 28259149 - 28259274
Alignment:
Q  145 ttgttcatgtgtaaagcttgaaagctagagtcttgtaaccttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccat 243  Q
    |||||| ||||||| ||||| ||||||   |||||||||  ||||||||||||||| |||| ||||||||||||||||||||||||||| |||||| |||    
T  28259149 ttgttcttgtgtaa-gcttgcaagctattttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccaaattaggtcat 28259247  T
Q  244 attgg-ctgaactgggtcaacaatctt 269  Q
    ||||| | |||||||||||||||||||    
T  28259248 attggaccgaactgggtcaacaatctt 28259274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 175 - 270
Target Start/End: Original strand, 10445444 - 10445542
Alignment:
Q  175 tcttgtaac-cttttgtaacactttcaca-tattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    ||||||||| ||||||||||||||||| | || |||||||||||||||||||||||||||||||||| |||||||| | ||||||| ||||||||||||    
T  10445444 tcttgtaactcttttgtaacactttcataatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactggatcaacaatcttg 10445542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 175 - 270
Target Start/End: Complemental strand, 17865300 - 17865202
Alignment:
Q  175 tcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatatt-ggctgaactgggtcaacaatcttg 270  Q
    ||||||||| ||||||||||||||||| |||| |||||||||| | ||||||||||||||||||||| |||||| | ||||||||||||||||||||||    
T  17865300 tcttgtaactcttttgtaacactttcatcatagtggattggagggttgctctctcccccagattaggtcatattcgactgaactgggtcaacaatcttg 17865202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 175 - 270
Target Start/End: Complemental strand, 20522317 - 20522219
Alignment:
Q  175 tcttgtaacc-ttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    |||||||||| |||||||||||||||| |||| |||||||||| | ||||||||||||||||||||| |||||||| | ||||||||||||||||||||    
T  20522317 tcttgtaacccttttgtaacactttcatcatagtggattggagggttgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttg 20522219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 175 - 270
Target Start/End: Original strand, 34682334 - 34682432
Alignment:
Q  175 tcttgtaac-cttttgtaacactttcac-atattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    ||||||||| |||||||||||||||||  ||| |||||||||||||||||||||||||||||||| | |||||||| | ||||||||||||||||||||    
T  34682334 tcttgtaactcttttgtaacactttcattatagtggattggagagctgctctctcccccagattatgtcatattggaccgaactgggtcaacaatcttg 34682432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 175 - 268
Target Start/End: Complemental strand, 34388955 - 34388859
Alignment:
Q  175 tcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatct 268  Q
    ||||||||| ||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||| |||||||| | ||| ||||||||||||||    
T  34388955 tcttgtaactcttttgtaacactttcatcatagtggattggagagctactctctcccccagattaggtcatattggaccgaattgggtcaacaatct 34388859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 145 - 268
Target Start/End: Original strand, 10707223 - 10707348
Alignment:
Q  145 ttgttcatgtgtaaagcttgaaagctagagtcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggcca 242  Q
    |||||| ||||||| ||||| ||||||   ||||||||| ||||||||||||||||| |||| |||||||||||| || ||||||||||| |||||| ||    
T  10707223 ttgttcttgtgtaa-gcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagttgttctctcccccatattaggtca 10707321  T
Q  243 tattgg-ctgaactgggtcaacaatct 268  Q
    |||||| | ||||||||||||||||||    
T  10707322 tattggaccgaactgggtcaacaatct 10707348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 175 - 270
Target Start/End: Original strand, 14699008 - 14699105
Alignment:
Q  175 tcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    ||||||||| |||||||||| |||||| |||| |||||||||| ||||||||||||||||||||||| |||||||| | ||||||||||||||||||||    
T  14699008 tcttgtaactcttttgtaac-ctttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttg 14699105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 266
Target Start/End: Original strand, 8390133 - 8390244
Alignment:
Q  158 aagcttgaaagctagagtcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaac 254  Q
    ||||||| ||||||   ||||||||| ||||| ||||||||||| |||| ||||||||||||||||||||||||||| |||||| ||| |||| | ||||    
T  8390133 aagcttgtaagctaatttcttgtaactcttttttaacactttcatcatagtggattggagagctgctctctcccccaaattaggtcattttggaccgaac 8390232  T
Q  255 tgggtcaacaat 266  Q
    ||||||||||||    
T  8390233 tgggtcaacaat 8390244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 25409922 - 25409860
Alignment:
Q  29 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    ||||||||||||||||| |||||  ||||||||||||||||||||||||||| ||||||||||    
T  25409922 gggttgagtgtctttgtagagaggatctcttgggttgggaaaaacattgtaaacaccttgggt 25409860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 184 - 269
Target Start/End: Complemental strand, 31056131 - 31056044
Alignment:
Q  184 cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattg-gctgaactgggtcaacaatctt 269  Q
    ||||||||||||||||| | || ||||||||||||||||||||||||| |||||||| |||||||  | ||||| |||||||||||||    
T  31056131 cttttgtaacactttcatcttagtggattggagagctgctctctcccctagattaggtcatattgaaccgaactaggtcaacaatctt 31056044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 269
Target Start/End: Original strand, 23078442 - 23078567
Alignment:
Q  145 ttgttcatgtgtaaagcttgaaagctagagtcttgtaaccttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccat 243  Q
    |||||| ||||||| ||||| ||||||   |||||||||  ||| ||||||||||| |||| |||||||||||| || ||||||||||| |||||| |||    
T  23078442 ttgttcttgtgtaa-gcttgcaagctattttcttgtaactctttctaacactttcatcatagtggattggagagttgttctctcccccatattaggtcat 23078540  T
Q  244 attggct-gaactgggtcaacaatctt 269  Q
    ||||| | |||||||||||||| ||||    
T  23078541 attggatcgaactgggtcaacattctt 23078567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 270
Target Start/End: Original strand, 33528621 - 33528719
Alignment:
Q  175 tcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    ||||||||| ||||||||||||||||| |||| |||||||||| | ||||||||  |||| |||||| |||||||| | ||||||||||||||||||||    
T  33528621 tcttgtaactcttttgtaacactttcatcatagtggattggagggttgctctctttcccatattaggtcatattggaccgaactgggtcaacaatcttg 33528719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 269
Target Start/End: Original strand, 36757718 - 36757859
Alignment:
Q  129 gggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagtcttgtaaccttttgtaacactttca-catattggattggagagctgctctctc 227  Q
    ||||||||  |||| ||||||| ||||||| |||||||||||    |||| ||||  |||| |||||||||| |||| ||||||||||||||| | || |    
T  36757718 gggtagaaattaggttttgttcttgtgtaa-gcttgaaagcttttttcttataactctttgaaacactttcatcatactggattggagagctgttatccc 36757816  T
Q  228 ccccagattaggccatattgg-ctgaactgggtcaacaatctt 269  Q
    |||||||||||| |||||||| | ||| |||||||||||||||    
T  36757817 ccccagattaggtcatattggaccgaattgggtcaacaatctt 36757859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 270
Target Start/End: Complemental strand, 39483028 - 39482930
Alignment:
Q  175 tcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    ||||||||| ||||||||||| ||||| |||| ||||||||||  ||||||||||||||| |||||| |||||||| | ||||| ||||||||||||||    
T  39483028 tcttgtaactcttttgtaacattttcatcatagtggattggaggcctgctctctcccccatattaggtcatattggaccgaactaggtcaacaatcttg 39482930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 184 - 270
Target Start/End: Original strand, 16940219 - 16940307
Alignment:
Q  184 cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    ||||||||||||||||| |||| |||||||||| |||| ||| |||||||||||| | |||||||| | ||| ||||||||||||||||    
T  16940219 cttttgtaacactttcatcatagtggattggagggctgatctttcccccagattatgtcatattggaccgaattgggtcaacaatcttg 16940307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 184 - 270
Target Start/End: Original strand, 17010884 - 17010972
Alignment:
Q  184 cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    ||||||||||||||||| |||| |||||||||| |||| ||| |||||||||||| | |||||||| | ||| ||||||||||||||||    
T  17010884 cttttgtaacactttcatcatagtggattggagggctgatctttcccccagattatgtcatattggaccgaattgggtcaacaatcttg 17010972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 175 - 269
Target Start/End: Original strand, 42039670 - 42039766
Alignment:
Q  175 tcttgtaaccttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 269  Q
    |||||||||  || |||||||||||| |||| |||||| ||||||||||||||||| ||||||||| |||||||| | ||||| | |||||||||||    
T  42039670 tcttgtaactcttcgtaacactttcatcatagtggattagagagctgctctctcccacagattaggtcatattggaccgaactagatcaacaatctt 42039766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 270
Target Start/End: Complemental strand, 33118222 - 33118135
Alignment:
Q  185 ttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    ||||||||| |||||| |||| |||||||||| |||||||||||||||| |||||| |||||||| | |||||| | |||||||||||    
T  33118222 ttttgtaactctttcatcatagtggattggagggctgctctctcccccaaattaggtcatattggaccgaactgagccaacaatcttg 33118135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 3492043 - 3491981
Alignment:
Q  29 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    ||||||||||||||||| | |||  ||||||||||||| ||||||||||||| ||||||||||    
T  3492043 gggttgagtgtctttgtagtgaggatctcttgggttggaaaaaacattgtaaacaccttgggt 3491981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 266
Target Start/End: Original strand, 1345574 - 1345635
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaat 266  Q
    ||||| |||||| |||||||||||||||| |||| |||||||| | ||||||||||||||||    
T  1345574 tggatcggagaggtgctctctcccccagagtaggtcatattggaccgaactgggtcaacaat 1345635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 266
Target Start/End: Original strand, 2838063 - 2838124
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaat 266  Q
    |||||||||||  |||||||||||||||| |||| |||||||| | ||||||||||||||||    
T  2838063 tggattggagatgtgctctctcccccagagtaggtcatattggaccgaactgggtcaacaat 2838124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 35215646 - 35215586
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  35215646 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 35215586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 35218023 - 35217963
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  35218023 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 35217963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 40739140 - 40739063
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  40739140 caaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 40739063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 186 - 248
Target Start/End: Original strand, 27149306 - 27149369
Alignment:
Q  186 tttgtaacactttcac-atattggattggagagctgctctctcccccagattaggccatattgg 248  Q
    |||||| ||||||||  ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  27149306 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 27149369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 36757570 - 36757630
Alignment:
Q  29 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  36757570 gggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 36757630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 39483222 - 39483162
Alignment:
Q  29 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    ||||||||||||||||||| |||  ||||||||||||||  ||| ||||||| ||||||||||    
T  39483222 gggttgagtgtctttgttgtgaggatctcttgggttggg--aaatattgtaaacaccttgggt 39483162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 266
Target Start/End: Original strand, 2869705 - 2869787
Alignment:
Q  186 tttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaat 266  Q
    |||||| |||||||| | || |||||||||||||| |||||||||| ||| |||| |||||||| | ||||||||| ||||||    
T  2869705 tttgtatcactttcatcttagtggattggagagctactctctcccctagagtaggtcatattggaccgaactgggtaaacaat 2869787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 21630232 - 21630174
Alignment:
Q  31 gttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    ||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  21630232 gttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 21630174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 265
Target Start/End: Complemental strand, 45332238 - 45332181
Alignment:
Q  209 attggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    ||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  45332238 attggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 45332181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 20522511 - 20522471
Alignment:
Q  29 gggttgagtgtctttgttgagagtgtctcttgggttgggaa 69  Q
    ||||||||||||||||| | |||| ||||||||||||||||    
T  20522511 gggttgagtgtctttgtagtgagtatctcttgggttgggaa 20522471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 23078278 - 23078339
Alignment:
Q  28 tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    ||||||||||||||||||   |||  ||||||||||||||  ||||||||||| ||||||||||    
T  23078278 tgggttgagtgtctttgtgatgagaatctcttgggttggg--aaacattgtaaacaccttgggt 23078339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 23452297 - 23452237
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  23452297 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 23452237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 29867780 - 29867840
Alignment:
Q  28 tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    ||||||||| ||||||| | ||||| |||||||||||||||||  |||||||| ||||||||||    
T  29867780 tgggttgagggtctttgattagagt-tctcttgggttgggaaa--cattgtaaacaccttgggt 29867840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 36558924 - 36558864
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  36558924 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 36558864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 36561201 - 36561141
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  36561201 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 36561141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 171
Target Start/End: Complemental strand, 40739012 - 40738933
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagcta 171  Q
    |||||||||||||| |||||||||||| ||| || || |||||||| ||| |  |||||| ||||| ||||||| ||||||    
T  40739012 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaaactaagacttgttcttgtgt-aagcttgcaagcta 40738933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 41586358 - 41586419
Alignment:
Q  29 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaaca-ttgtaatcaccttgggt 91  Q
    |||||||||||||||| ||||||  |||||||||||||  |||||| |||||| ||||||||||    
T  41586358 gggttgagtgtctttggtgagagcttctcttgggttgg--aaaacagttgtaaacaccttgggt 41586419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 307; Significance: 1e-173; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 10 - 371
Target Start/End: Original strand, 31109407 - 31109768
Alignment:
Q  10 agcaaaggagggaacca-atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgt 108  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31109407 agcaaaggagggaaccatatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgt 31109506  T
Q  109 gagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagtcttgtaaccttttgtaacactttcacatattgg 208  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  31109507 gagagtgggaaaatatcaaagggtagaatctagggtttgttcatgtgcaaagcttgaaggctagagtcttgtaaccttttgtaacactttctcatattgg 31109606  T
Q  209 attggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttcttccttttaccgcttatcttgtt 308  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||   | ||||||||||    
T  31109607 attggagagctgctctctcccctagattaggccatattggctgaactgggtcaacaatcttgttcggtgttttgttcttccttttcttgtttatcttgtt 31109706  T
Q  309 tatgctttggaatctcttgtgtggttttgctatacactagcttagggctgttttgttgttgtt 371  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  31109707 tatgctttggaatctcttgtgtggttttgctatacactag-ttagggctgttttgttgttgtt 31109768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 10 - 373
Target Start/End: Complemental strand, 12397172 - 12396809
Alignment:
Q  10 agcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12397172 agcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattgtg 12397073  T
Q  110 agagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagag-tcttgtaaccttttgtaacactttcacatattgg 208  Q
    | |||||| ||| |||||||||||||||||||||||||||||||||||||| || || ||||||| ||||||||||||||||||||||||| ||||||||    
T  12397072 atagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagattaaaggctagagttcttgtaaccttttgtaacactttctcatattgg 12396973  T
Q  209 attggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttcttccttttaccgcttatcttgtt 308  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||| ||||||||||||||||||    
T  12396972 attggagagctgttctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttcttccctttaccgcttatcttgtt 12396874  T
Q  309 tatgctttggaatctc-ttgtgtggttttgctatacactagcttagggctgttttgttgttgtttg 373  Q
    | |||||||| ||||| ||||||||||||||||||||||||  |||||||| ||||||||||||||    
T  12396873 t-tgctttggtatctctttgtgtggttttgctatacactagtctagggctgctttgttgttgtttg 12396809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 17 - 373
Target Start/End: Complemental strand, 12406585 - 12406229
Alignment:
Q  17 gagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtgagagtgg 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  12406585 gagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttggcttttagggttcatattgtgagagtgg 12406486  T
Q  117 gaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagag-tcttgtaaccttttgtaacactttcacatattggattggag 215  Q
    | ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  12406485 ggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattggattggag 12406386  T
Q  216 agctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttcttccttttaccgcttatcttgtttatgctt 315  Q
    ||||  ||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||| ||||||||||||||||||||| |||||    
T  12406385 agctattctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttctttcttttaccgcttatcttgttt-tgctt 12406288  T
Q  316 tggaatctc-ttgtgtggttttgctatacactagcttagggctgttttgttgttgtttg 373  Q
    ||| ||||| ||||||||||||||||||||||||  |||||||| ||||||||||||||    
T  12406287 tggtatctctttgtgtggttttgctatacactagtctagggctgctttgttgttgtttg 12406229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 10 - 373
Target Start/End: Original strand, 24024151 - 24024515
Alignment:
Q  10 agcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||    
T  24024151 agcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggtttggaaaaacattgtaatcaccgtgggttttagggttcatcgtgtg 24024250  T
Q  110 agagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagtcttgtaaccttttgtaacactttcacatattgga 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||    
T  24024251 agagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtcttgtaacattttgtaacactttctcatattgga 24024350  T
Q  210 ttggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtg-ttttgttcttccttttaccgcttatcttgtt 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||   ||||||||||||    
T  24024351 ttggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgttcggtgtttttgttcttccttttcttgcttatcttgtt 24024450  T
Q  309 tatgctttggaatctc-ttgtgtggttttgctatacactag-cttagggctgttttgttgttgtttg 373  Q
    ||||| |||  | ||| |||||||||||||||||| ||||| | || ||||||||||||||||||||    
T  24024451 tatgc-ttgttagctctttgtgtggttttgctatatactagtcata-ggctgttttgttgttgtttg 24024515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 40 - 370
Target Start/End: Complemental strand, 19992544 - 19992213
Alignment:
Q  40 ctttgttgagagtgtctcttgggttggg-aaaaacattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatc 138  Q
    ||||| || |||||| |||| ||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||  ||    
T  19992544 ctttgatgtgagtgtttcttaggttggggaaaaacattgtaatcaccttgggattttgggttcatagtgtgagagtgggaaaataccaaagggtagt-tc 19992446  T
Q  139 tagggtttgttcatgtgtaaagcttga-aagctagagtcttgtaaccttttgtaacactttcacatattggattggagagctgctctctcccccagatta 237  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19992445 tagggtttgttcatgtgtaaagcttgataagctagagtcttgtaaccttttgtaacactttcacatattggattggagagctgctctctcccccagatta 19992346  T
Q  238 ggccatattggctgaactgggtcaacaatcttgtttggtgttttgttc-ttccttttaccgcttatcttgtttatgctttggaatctc-ttgtgtggttt 335  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||| ||||||||||||||| |||  | ||| |||||||||||    
T  19992345 ggccatattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgc-ttgttagctctttgtgtggttt 19992247  T
Q  336 tgctatacactagcttagggctgttttgttgttgt 370  Q
    ||||||||||||||||||||||| |||||||||||    
T  19992246 tgctatacactagcttagggctg-tttgttgttgt 19992213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 40 - 371
Target Start/End: Original strand, 21812092 - 21812424
Alignment:
Q  40 ctttgttgagagtgtctcttgggttggg-aaaaacattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatc 138  Q
    ||||| ||||||||| |||| ||||||| ||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||| ||    
T  21812092 ctttgatgagagtgtttcttaggttggggaaaaacattgtaatcaccttgggattatgggttcatagtgtgagagtgggaaaataccaaagggtaga-tc 21812190  T
Q  139 tagggtttgttcatgtgtaaagctt-ga-aagctagagtcttgtaaccttttgtaacactttcacatattggattggagagctgctctctcccccagatt 236  Q
    ||||||||||||||||||||||||| || |||||||||||||| |||||||||||| |||| |||||||||||||||| |||||||||||||||||||||    
T  21812191 tagggtttgttcatgtgtaaagctttgacaagctagagtcttggaaccttttgtaagactt-cacatattggattggaaagctgctctctcccccagatt 21812289  T
Q  237 aggccatattggctgaactgggtcaacaatcttgtttggtgttttgttc-ttccttttaccgcttatcttgtttatgctt-tggaatctcttgtgtggtt 334  Q
    |||||| ||||||||||||||||||||||||||| | |||||||||||| || ||||||||| ||||||||||||||||| |  | ||| ||||||||||    
T  21812290 aggccacattggctgaactgggtcaacaatcttgctcggtgttttgttcttttcttttaccgtttatcttgtttatgcttgttaactct-ttgtgtggtt 21812388  T
Q  335 ttgctatacactagcttagggctgttttgttgttgtt 371  Q
    |||||||||||||||||||||||| ||||||||||||    
T  21812389 ttgctatacactagcttagggctg-tttgttgttgtt 21812424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 40 - 285
Target Start/End: Original strand, 24266054 - 24266302
Alignment:
Q  40 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtagaat 137  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||  ||||||||||||||||  ||||||| |||||||||||||  |    
T  24266054 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgaggttgggaaattaccaaagggtagg-t 24266152  T
Q  138 ctagggtttgttcatgtgtaaagcttga-aagctagagtcttgtaac-cttttgtaacactttcacatattggattggagagctgctctctcccccagat 235  Q
    |||||||||  || |||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  24266153 ctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccagat 24266252  T
Q  236 taggccatattggctgaactgggtcaacaatcttgtttggtgttttgttc 285  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  24266253 taggccacattggctgaactgggtcaacaatcttgcttggtgttttgttc 24266302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 40 - 307
Target Start/End: Original strand, 24261175 - 24261447
Alignment:
Q  40 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtagaat 137  Q
    ||||| ||||||||  |||| |||||||||||  |||||||||||| |||||| ||  ||||||||||||||||  ||||||| |||||||||||||  |    
T  24261175 ctttgatgagagtgaatcttaggttgggaaaacaacattgtaatcatcttgggattatgggttcatagtgtgaggttgggaaattaccaaagggtagg-t 24261273  T
Q  138 ctagggtttgttcatgtgtaaagcttga-aagctagagtcttgtaac-cttttgtaacactttcacatattggattggagagctgctctctcccccagat 235  Q
    |||||||||  || |||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  24261274 ctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccagat 24261373  T
Q  236 taggccatattggctgaactgggtcaacaatcttgtttggtgttttgttc--ttccttttaccgcttatcttgt 307  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||  || |||||| || |||||||||    
T  24261374 taggccacattggctgaactgggtcaacaatcttgcttggtgttttgttcgttttcttttatcgtttatcttgt 24261447  T

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Target: chr7; HSP #9
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 91 - 371
Target Start/End: Original strand, 20357463 - 20357744
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagt--cttgtaacctttt 188  Q
    |||||||||||||| |||||||||||| ||| ||  | |||||||||||||||  ||||| ||||||||||||||| ||||  ||  ||||||||| |||    
T  20357463 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcatgttcttgtgtaaagcttgaaggctattgtttcttgtaacccttt 20357562  T
Q  189 gtaacactttcacatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttcttc 288  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||| |||||||||||    
T  20357563 gtaacactttctcatattggattggagagctgctctctcccccaaattaggccatattggctgaactgggtcaacaatctt-cttggtattttgttcttc 20357661  T
Q  289 cttttaccgcttatcttgtttatgctttggaatctc-ttgtgtggttttgctatacactagcttagggctg-ttttgttgttgtt 371  Q
    |||||   ||||||||||||  |||||||  ||||| ||||||||||||||| ||||||||  |||||||| |||||||||||||    
T  20357662 cttttcttgcttatcttgtt--tgctttgttatctctttgtgtggttttgctctacactagtctagggctgtttttgttgttgtt 20357744  T

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Target: chr7; HSP #10
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 180 - 373
Target Start/End: Complemental strand, 4866820 - 4866627
Alignment:
Q  180 taaccttttgtaacactttcacatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgtt 279  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||    
T  4866820 taaccttttgtaacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgtt 4866722  T
Q  280 ttgttcttccttttaccgcttatcttgtttatgctttggaatc-tcttgtgtgg-ttttgctatacactagcttagggctgttttgttgttgtttg 373  Q
    |||||||||||||||||||||||||||||| |||||||| ||| | |||||||| ||||||||||||||||  |||| ||||||||||||||||||    
T  4866721 ttgttcttccttttaccgcttatcttgttt-tgctttggtatctttttgtgtggtttttgctatacactagtctaggactgttttgttgttgtttg 4866627  T

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Target: chr7; HSP #11
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 91 - 373
Target Start/End: Complemental strand, 2058147 - 2057857
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaa-gggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagt--cttgtaaccttt 187  Q
    |||||||||||||| |||||||||||| ||| | || | ||||||||||||||| |||||| ||||||| ||||||| ||||  ||  ||||||||| ||    
T  2058147 ttttagggttcatattgtgagagtggggaaacaacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaatgctattgtttcttgtaaccctt 2058049  T
Q  188 tgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttct 286  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  2058048 tgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-cttggtgttttgttct 2057950  T
Q  287 tccttttaccgcttatcttg----tttatgctttggaatctc-ttgtgtggttttgctatacactagcttagggctg-ttttgttgttgtttg 373  Q
    ||||||||  ||||||||||    ||| |||||||| ||||| ||||||||||||||| || || ||  |||||| | |||||||||||||||    
T  2057949 tccttttattgcttatcttgtttttttttgctttggtatctctttgtgtggttttgctctaaacaagtctagggcggtttttgttgttgtttg 2057857  T

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Target: chr7; HSP #12
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 40 - 307
Target Start/End: Complemental strand, 16885162 - 16884890
Alignment:
Q  40 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaat-accaaagggtagaa 136  Q
    ||||| ||||||||  |||| |||||||||||  |||||||||||| |||||| ||  ||||||||||||||||  ||||||| | | ||||||||||      
T  16885162 ctttgatgagagtgaatcttaggttgggaaaacaacattgtaatcatcttgggattatgggttcatagtgtgaggttgggaaatttatcaaagggtagg- 16885064  T
Q  137 tctagggtttgttcatgtgtaaagcttga-aagctagagtcttgtaaccttttgtaacactttcacatattggattggagagctgctctctcccccagat 235  Q
    ||||||||||  || |||||||||||||| |||||||| |||||||||  ||||||| || |||||||||||||||||||||||||||||||||||||||    
T  16885063 tctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactctttgtaaaacattcacatattggattggagagctgctctctcccccagat 16884964  T
Q  236 taggccatattggctgaactgggtcaacaatcttgtttggtgttttgttc--ttccttttaccgcttatcttgt 307  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||  || |||||| || |||||||||    
T  16884963 taggccacattggctgaactgggtcaacaatcttgcttggtgttttgttcgttttcttttatcgtttatcttgt 16884890  T

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Target: chr7; HSP #13
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 40 - 307
Target Start/End: Complemental strand, 16880306 - 16880034
Alignment:
Q  40 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaat-accaaagggtagaa 136  Q
    ||||| ||||||||  |||| |||||| ||||  |||||||||||| |||||| ||  ||||||||||||||||  ||||||| | | ||||||||||      
T  16880306 ctttgatgagagtgaatcttaggttggaaaaacaacattgtaatcatcttgggattatgggttcatagtgtgaggttgggaaatttatcaaagggtagg- 16880208  T
Q  137 tctagggtttgttcatgtgtaaagcttga-aagctagagtcttgtaaccttttgtaacactttcacatattggattggagagctgctctctcccccagat 235  Q
    ||||||||||  || |||||||||||||| |||||||| |||||||||  ||||||| || |||||||||||||||||||||||||||||||||||||||    
T  16880207 tctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactctttgtaaaacattcacatattggattggagagctgctctctcccccagat 16880108  T
Q  236 taggccatattggctgaactgggtcaacaatcttgtttggtgttttgttc--ttccttttaccgcttatcttgt 307  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||  || |||||| || |||||||||    
T  16880107 taggccacattggctgaactgggtcaacaatcttgcttggtgttttgttcgttttcttttatcgtttatcttgt 16880034  T

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Target: chr7; HSP #14
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 91 - 371
Target Start/End: Complemental strand, 21639988 - 21639711
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagcta-gagtcttgtaaccttttg 189  Q
    |||||||||||||| |||||||||||| ||| || || ||||||||||||||  |||||| ||||| ||||||| ||||||    |||||||||| ||||    
T  21639988 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgt-aagcttgcaagctatttttcttgtaaccctttg 21639890  T
Q  190 taacactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgt-tttgttctt 287  Q
    |||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  21639889 taacactttcattatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-tttggtgtgtttgttctt 21639791  T
Q  288 ccttttaccgcttatcttgtttatgctttggaatctcttgtgtggttttgctatacactagcttagggctg-ttttgttgttgtt 371  Q
    || |||   ||||||||||||  ||||||| | |||||  |||||| ||||| ||||||||  |||||||| |||||||||||||    
T  21639790 cc-tttcttgcttatcttgtt--tgctttgtattctct--tgtggtgttgctctacactagactagggctgtttttgttgttgtt 21639711  T

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Target: chr7; HSP #15
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 91 - 371
Target Start/End: Original strand, 1533359 - 1533639
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttg-ttcatgtgtaaagcttgaaagcta--gagtcttgtaaccttt 187  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||||||  ||| ||| ||||| ||||||| ||||||  |  |||||||||| ||    
T  1533359 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctaggtcttgtttcttgtgt-aagcttgcaagctattgtttcttgtaaccctt 1533457  T
Q  188 tgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgt-tttgttc 285  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||    
T  1533458 tgtaacactttcatcatattggattggagagatgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-attggtgtgtttgttc 1533556  T
Q  286 ttccttttaccgcttatcttgtttatgctttggaatctcttgtgtggttttgctatacactagcttagggct-gttttgttgttgtt 371  Q
    || | |||   |||||| |||||  ||||||| | |||||| |||||| ||||| ||||||||  | ||||| ||||||||||||||    
T  1533557 tttc-tttcttgcttatattgtt--tgctttgtattctctt-tgtggtgttgctctacactagactggggctggttttgttgttgtt 1533639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 91 - 371
Target Start/End: Complemental strand, 21646186 - 21645909
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagcta-gagtcttgtaaccttttg 189  Q
    |||||||||||||| |||||||||||| ||| || || ||||||||||||||  |||||| ||||| ||||||| ||||||    |||||||||| |||     
T  21646186 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgt-aagcttgcaagctatttttcttgtaaccctttt 21646088  T
Q  190 taacactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgt-tttgttctt 287  Q
    ||||||||||| |||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  21646087 taacactttcatcatagtggattggagagctgctctcttccctagattaggccatattggctgaactgggtcaacaatctt-tttggtgtgtttgttctt 21645989  T
Q  288 ccttttaccgcttatcttgtttatgctttggaatctcttgtgtggttttgctatacactagcttagggctg-ttttgttgttgtt 371  Q
    || |||   ||||||||||||  || |||| | |||||  |||||| ||||| ||||||||  |||||||| |||||||||||||    
T  21645988 cc-tttcttgcttatcttgtt--tgttttgtattctct--tgtggtgttgctctacactagactagggctgtttttgttgttgtt 21645909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 91 - 292
Target Start/End: Complemental strand, 18408943 - 18408742
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagt-cttgtaaccttttg 189  Q
    |||||||||||||| |||||||||||| ||| || || |||||||| |||||  |||||| ||||||| ||||| ||| ||   | ||||||||| ||||    
T  18408943 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaaactaggacttgttcttgtgtaa-gcttgcaagttatttttcttgtaaccctttg 18408845  T
Q  190 taacactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgt-tttgttctt 287  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||    
T  18408844 taacactttcatcatactggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatct--tttggtgtgtttgttctt 18408747  T
Q  288 ccttt 292  Q
     ||||    
T  18408746 tcttt 18408742  T

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Target: chr7; HSP #18
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 91 - 292
Target Start/End: Complemental strand, 18413819 - 18413619
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagt-cttgtaaccttttg 189  Q
    |||||||||||||| |||||||||||| ||| || || |||||||| |||||  |||||| ||||||| ||||| || |||   | ||||||||| ||||    
T  18413819 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaaactaggacttgttcttgtgtaa-gcttgcaatctatttttcttgtaaccctttg 18413721  T
Q  190 taacactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgt-tttgttctt 287  Q
    ||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||| |||||||||    
T  18413720 taacactttcatcatagtggattggagagctgctctctcccc-agattaggccatattggctgaactgggtcaacaatct--tttggtgtgtttgttctt 18413624  T
Q  288 ccttt 292  Q
     ||||    
T  18413623 tcttt 18413619  T

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Target: chr7; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 4873387 - 4873310
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4873387 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 4873310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 20357331 - 20357410
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20357331 caaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 20357410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 1533228 - 1533307
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1533228 caaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 1533307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 2058281 - 2058202
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2058281 caaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 2058202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 129 - 268
Target Start/End: Complemental strand, 21983427 - 21983285
Alignment:
Q  129 gggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagtcttgtaacc--ttttgtaacactttca-catattggattggagagctgctctc 225  Q
    |||||||| |||||  |||||| ||||||| ||||| ||||||   |||||||||   |||||||||||||||| |||| ||||||||||||||||||||    
T  21983427 gggtagaaactaggtcttgttcttgtgtaa-gcttgcaagctattttcttgtaactctttttgtaacactttcatcatagtggattggagagctgctctc 21983329  T
Q  226 tcccccagattaggccatattgg-ctgaactgggtcaacaatct 268  Q
    |||||||||||||| |||||||| | ||||||||||||||||||    
T  21983328 tcccccagattaggtcatattggaccgaactgggtcaacaatct 21983285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 145 - 270
Target Start/End: Complemental strand, 29159929 - 29159802
Alignment:
Q  145 ttgttcatgtgtaaagcttgaaagctagagtcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggcca 242  Q
    |||||| ||||||| ||||| ||||||   ||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||| ||    
T  29159929 ttgttcttgtgtaa-gcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcccctagattaggtca 29159831  T
Q  243 tattgg-ctgaactgggtcaacaatcttg 270  Q
    |||||| | ||||||||||||||||||||    
T  29159830 tattggaccgaactgggtcaacaatcttg 29159802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 175 - 270
Target Start/End: Original strand, 46516310 - 46516408
Alignment:
Q  175 tcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    ||||||||| ||||||||||||||||| |||| |||||||||| |||||||||||||| |||||||| |||||||| | ||||||||||||||||||||    
T  46516310 tcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccctagattaggtcatattggaccgaactgggtcaacaatcttg 46516408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 175 - 270
Target Start/End: Complemental strand, 49091758 - 49091660
Alignment:
Q  175 tcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    ||||||||| ||||||||||||||||| |||| |||||||||||| |||||||| |||||||||||| |||||||| || |||||||||||||||||||    
T  49091758 tcttgtaactcttttgtaacactttcatcatagtggattggagagttgctctcttccccagattaggtcatattggactaaactgggtcaacaatcttg 49091660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 175 - 269
Target Start/End: Original strand, 44848685 - 44848781
Alignment:
Q  175 tcttgtaaccttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattg-gctgaactgggtcaacaatctt 269  Q
    |||||||||  ||||||||||||||| |||| |||||||||||||||||||||||||||| ||||| |||||||  | |||||||||||||||||||    
T  44848685 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccaggttaggtcatattgaaccgaactgggtcaacaatctt 44848781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 129 - 270
Target Start/End: Complemental strand, 2580531 - 2580389
Alignment:
Q  129 gggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagtcttgtaaccttttgtaacactttca-catattggattggagagctgctctctc 227  Q
    |||||||| |||||  |||||| ||||||| ||||| ||||||   |||||||||   |||||||||||||| | || ||||||||||||||||||||||    
T  2580531 gggtagaaactaggacttgttcttgtgtaa-gcttgcaagctattttcttgtaactcattgtaacactttcatcttagtggattggagagctgctctctc 2580433  T
Q  228 ccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    ||||||| |||| |||||||| | ||| ||||||||||||||||    
T  2580432 ccccagactaggtcatattggaccgaattgggtcaacaatcttg 2580389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 175 - 270
Target Start/End: Original strand, 2647696 - 2647794
Alignment:
Q  175 tcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatatt-ggctgaactgggtcaacaatcttg 270  Q
    ||||||||| ||||||||||||||||| |||| |||||||||| |||||||||||||||||| |||| |||||| ||| ||| ||||||||||||||||    
T  2647696 tcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagaataggtcatattgggccgaattgggtcaacaatcttg 2647794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 175 - 270
Target Start/End: Original strand, 33332450 - 33332548
Alignment:
Q  175 tcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattggct-gaactgggtcaacaatcttg 270  Q
    ||||||||| ||||||||||||||||| | || |||||||||| ||||||||||||||||||||||| |||||| | | ||||||||||||||||||||    
T  33332450 tcttgtaactcttttgtaacactttcatcttagtggattggagggctgctctctcccccagattaggtcatattagatcgaactgggtcaacaatcttg 33332548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 187 - 270
Target Start/End: Original strand, 9190021 - 9190106
Alignment:
Q  187 ttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    |||||||||||||| | || ||||||||||||||||||||||||||||| |||| |||||||| | ||||||||||||||||||||    
T  9190021 ttgtaacactttcatcttagtggattggagagctgctctctcccccagactaggtcatattggaccgaactgggtcaacaatcttg 9190106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 187 - 270
Target Start/End: Complemental strand, 20284173 - 20284088
Alignment:
Q  187 ttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    |||||||||||||| | || |||||||||| ||||||||||||||||||||||| |||||||| | ||||||||||||||||||||    
T  20284173 ttgtaacactttcatcttagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttg 20284088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 21640118 - 21640039
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||    ||||||||||||||||| |||||  ||||||||||||||||||||||||||| ||||||||||    
T  21640118 caaaggagggaactctagggttgagtgtctttgtagagaggatctcttgggttgggaaaaacattgtaaacaccttgggt 21640039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 175 - 270
Target Start/End: Complemental strand, 56044 - 55947
Alignment:
Q  175 tcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    ||||||||| ||||||||||||||||| |||| |||||||||| |||||||||| |||||||||||| |||||||| | |||||||||||| |||||||    
T  56044 tcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctct-ccccagattaggtcatattggaccgaactgggtcaataatcttg 55947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 21646299 - 21646237
Alignment:
Q  29 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    ||||||||||||||||| |||||  ||||||||||||||||||||||||||| ||||||||||    
T  21646299 gggttgagtgtctttgtagagaggatctcttgggttgggaaaaacattgtaaacaccttgggt 21646237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 18409072 - 18408993
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||    ||||||||||||||||| | |||  ||||||||||||||||||||||||||| ||||||||||    
T  18409072 caaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgggaaaaacattgtaaacaccttgggt 18408993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 270
Target Start/End: Complemental strand, 35960901 - 35960815
Alignment:
Q  186 tttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattg-gctgaactgggtcaacaatcttg 270  Q
    ||||||||||||||| |||| ||| |||||| ||||||||||||||||||||||| |||||||  | ||||| ||||||||||||||    
T  35960901 tttgtaacactttcatcatagtggtttggagggctgctctctcccccagattaggtcatattgaaccgaactcggtcaacaatcttg 35960815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 187 - 270
Target Start/End: Original strand, 9185178 - 9185263
Alignment:
Q  187 ttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    |||||||||||||| | || |||||||||||||| |||||||||||||| ||||  ||||||| | ||||||||||||||||||||    
T  9185178 ttgtaacactttcatcttagtggattggagagcttctctctcccccagactaggttatattggaccgaactgggtcaacaatcttg 9185263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 18413948 - 18413869
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||    ||||||||||||||||| | |||  ||||||||||||||||||||| ||||| ||||||||||    
T  18413948 caaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgggaaaaacaatgtaaacaccttgggt 18413869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 145 - 269
Target Start/End: Complemental strand, 2479461 - 2479337
Alignment:
Q  145 ttgttcatgtgtaaagcttgaaagctagagtcttgtaaccttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccat 243  Q
    |||||| ||||||| ||||| ||||||   |||| ||||  ||||||||||||||| |||| |||||| ||||||||||||| |||| |||||||| |||    
T  2479461 ttgttcttgtgtaa-gcttgcaagctattttcttataactctttgtaacactttcatcatagtggatttgagagctgctctc-cccctagattaggtcat 2479364  T
Q  244 attgg-ctgaactgggtcaacaatctt 269  Q
    ||||  | |||||||||||||||||||    
T  2479363 attgaaccgaactgggtcaacaatctt 2479337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 175 - 270
Target Start/End: Original strand, 4796667 - 4796765
Alignment:
Q  175 tcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    ||||||||| ||||||||||| ||||| |||| |||||| ||| |||||| |||||||||||||||| ||| |||| | ||||||||| ||||||||||    
T  4796667 tcttgtaactcttttgtaacaatttcatcatagtggatttgagggctgctttctcccccagattaggtcattttggaccgaactgggttaacaatcttg 4796765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 190 - 269
Target Start/End: Complemental strand, 47263757 - 47263678
Alignment:
Q  190 taacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 269  Q
    ||||||||||| |||| ||||||||||||||||  ||||||||| |||||| |||||||| | |||||||||||||||||||    
T  47263757 taacactttcatcatagtggattggagagctgc--tctcccccatattaggtcatattggaccgaactgggtcaacaatctt 47263678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 266
Target Start/End: Original strand, 28617258 - 28617319
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaat 266  Q
    ||||||||||||||||||||||||||||| |||| |||||||| | ||||||||| ||||||    
T  28617258 tggattggagagctgctctctcccccagagtaggtcatattggaccgaactgggtaaacaat 28617319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 268
Target Start/End: Complemental strand, 21988992 - 21988909
Alignment:
Q  185 ttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatct 268  Q
    |||||||||||||||| || | |||||||||||| |||||||  | |||||||||| |||||||| | ||||||||||||||||||    
T  21988992 ttttgtaacactttcatcaaagtggattggagagttgctctc--ctccagattaggtcatattggaccgaactgggtcaacaatct 21988909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 31155971 - 31155911
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  31155971 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 31155911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 20284378 - 20284318
Alignment:
Q  29 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  20284378 gggttgagtgtctttgtagtgaggttctcttgggttggg--aaacattgtaaacaccttgggt 20284318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 23402821 - 23402881
Alignment:
Q  29 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  23402821 gggttgagtgtctttgtagtgaggttctcttgggttggg--aaacattgtaaacaccttgggt 23402881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 4796477 - 4796536
Alignment:
Q  30 ggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||||| | |||  |||||||||||||  |||||||||||| ||||||||||    
T  4796477 ggttgagtgtctttgtagtgaggatctcttgggttgg--aaaacattgtaaacaccttgggt 4796536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 5817282 - 5817366
Alignment:
Q  186 tttgtaacactttcacat-attggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 269  Q
    |||||| |||||||| || | ||||||||||||||||||||| ||||||| |||| |||||||| | |||||| || |||||||||    
T  5817282 tttgtatcactttcatattagtggattggagagctgctctct-ccccagagtaggtcatattggaccgaactgagttaacaatctt 5817366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 44847933 - 44847991
Alignment:
Q  29 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 89  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||    
T  44847933 gggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgg 44847991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 1049356 - 1049296
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  1049356 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 1049296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 2479642 - 2479565
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||    ||||||||||||||| | | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  2479642 caaaggagggaactttagggttgagtgtctttatagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 2479565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 2935497 - 2935557
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  2935497 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 2935557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 3035953 - 3036013
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  3035953 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 3036013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 7351712 - 7351652
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    |||||||||| |||||||||||||||| | |||| || ||||| | |||||||||||||||    
T  7351712 tggattggagggctgctctctcccccatactaggtcagattggaccgaactgggtcaacaa 7351652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 269
Target Start/End: Original strand, 8153466 - 8153514
Alignment:
Q  222 tctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 269  Q
    |||||||||||||||||| ||  |||| |||||||||||||||||||||    
T  8153466 tctctcccccagattaggtcaagttggactgaactgggtcaacaatctt 8153514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 9027254 - 9027194
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  9027254 tggataggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 9027194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 21989194 - 21989137
Alignment:
Q  32 ttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  21989194 ttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 21989137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 22108295 - 22108355
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  22108295 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 22108355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 22137306 - 22137366
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  22137306 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 22137366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 40550055 - 40550115
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  40550055 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 40550115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 40552333 - 40552393
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  40552333 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 40552393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 297; Significance: 1e-167; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 12 - 373
Target Start/End: Original strand, 14737403 - 14737764
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtgag 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14737403 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtgag 14737502  T
Q  112 agtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagtcttgtaaccttttgtaacactttcacatattggatt 211  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  14737503 agtgggaaaataccaaagggtagaatctagggtttgttcatatgtaaagcttgaaggctagagtcttgtaaccttttgtaacactttctcatattggatt 14737602  T
Q  212 ggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttcttccttttaccgcttatcttgtttat 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  | |||||||||||||| ||||||||||||||||||||| |    
T  14737603 ggagagctgctctctcccccagattaggccatattggctgaactggatcaacaatctt-ctcggtgttttgttctttcttttaccgcttatcttgttt-t 14737700  T
Q  312 gctttggaatctc--ttgtgtggttttgctatacactagcttagggctgttttgttgttgtttg 373  Q
    ||||||| |||||  ||||||||||||||||||||||||  |||||||||||||||||||||||    
T  14737701 gctttggtatctcttttgtgtggttttgctatacactagtctagggctgttttgttgttgtttg 14737764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 12 - 370
Target Start/End: Original strand, 14742263 - 14742620
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtgag 111  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  14742263 caaaggagggaaccaatgggttaagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcactttgggttttagggttcatagtgtgag 14742362  T
Q  112 agtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagtcttgtaaccttttgtaacactttcacatattggatt 211  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  14742363 agtgggaaaataccaaagggtagaatctagggtttgttcatatgtaaagcttgaaggctagagtcttgtaaccttttgtaacactttctcatattggatt 14742462  T
Q  212 ggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttcttccttttaccgcttatcttgtttat 311  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||  | |||||||||||||| ||||||||||||||||||||| |    
T  14742463 ggagagctgctctctcccccaaattaggtcatattggctgaactgggtcaacaatctt-ctcggtgttttgttctttcttttaccgcttatcttgttt-t 14742560  T
Q  312 gctttggaatctc-ttgtgtggttttgctatacactagcttagggctgttttgttgttgt 370  Q
    ||||||  ||||| ||||||||||||||||||||||||  ||||||||||||||||||||    
T  14742561 gctttgatatctctttgtgtggttttgctatacactagtctagggctgttttgttgttgt 14742620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 10 - 373
Target Start/End: Original strand, 22010521 - 22010884
Alignment:
Q  10 agcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22010521 agcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattgtg 22010620  T
Q  110 agagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagag-tcttgtaaccttttgtaacactttcacatattgg 208  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||    
T  22010621 agagtggggaaatatcaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattgg 22010720  T
Q  209 attggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttcttccttttaccgcttatcttgtt 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||| |||||||||||||    
T  22010721 attggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttcttccttttatcgcttatcttgtt 22010819  T
Q  309 tatgctttggaatctc-ttgtgtggttttgctatacactagcttagggctgttttgttgttgtttg 373  Q
    | |||||||| ||||| |||||||||||||||||||||| |  |||||| | ||||||||||||||    
T  22010820 t-tgctttggtatctctttgtgtggttttgctatacacttgtctagggcggctttgttgttgtttg 22010884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 10 - 373
Target Start/End: Complemental strand, 11857235 - 11856869
Alignment:
Q  10 agcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11857235 agcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattgtg 11857136  T
Q  110 agagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagag-tcttgtaaccttttgtaacactttcacatattgg 208  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||    
T  11857135 agagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattgg 11857036  T
Q  209 attggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtt--tggtgttttgttcttccttttaccgcttatcttg 306  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||  || | ||||||||||||||||| ||||| |||||    
T  11857035 attggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaatcttcttggtgtttttttgttcttccttttatcgcttgtcttg 11856936  T
Q  307 tttatgctttggaatctc-ttgtgtggttttgctatacactagcttagggctgttttgttgttgtttg 373  Q
    ||| |||||||| ||||| ||||||||||||||||||||||||  |||||||||||||||||||||||    
T  11856935 ttt-tgctttggtatctctttgtgtggttttgctatacactagtctagggctgttttgttgttgtttg 11856869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 21 - 373
Target Start/End: Complemental strand, 28184757 - 28184402
Alignment:
Q  21 gaaccaatgggttgagtgtctttgttgagagtgtctcttgggttggg---aaaaacattgtaatcaccttgggttttagggttcatagtgtgagagtggg 117  Q
    |||| ||||||||||| ||||||||||||||||||||||||||| ||   |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  28184757 gaacaaatgggttgagggtctttgttgagagtgtctcttgggtttgggaaaaaaacatagtaatcaccttgggttttagggttcatagtgtgagagtggg 28184658  T
Q  118 aaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagtcttgtaaccttttgtaacactttcacatattggattggagag 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||| ||||||||||    
T  28184657 aaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtgttgtaaccttttgtaacactttctcatattagattggagag 28184558  T
Q  218 ctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttc-ttccttttaccgcttatcttgtttatgcttt 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||| ||| |||||||||||||||||||||||||||    
T  28184557 ctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttctttctttttaccgcttatcttgtttatgcttt 28184459  T
Q  317 ggaatctcttgtgtggttttgctatacactagcttagggctgttttgttgttgtttg 373  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  28184458 ggaatctcttgtgtggttttgctatacactagtctagggctgttttgttgttgtttg 28184402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 27 - 373
Target Start/End: Complemental strand, 6438743 - 6438398
Alignment:
Q  27 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaatacca 126  Q
    ||||| || ||| ||||| |||||| || |||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  6438743 atggggtgtgtgcctttgatgagagagtttcttaggttgggaaaaacattgtaatcaccttgggattttgggttcatagtgtgagagtgggaaaatacca 6438644  T
Q  127 aagggtagaatctagggtttgttcatgtgtaaagcttga-aagctagagtcttgtaaccttttgtaacactttcacatattggattggagagctgctctc 225  Q
    ||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6438643 aagggtagt-tctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaaccttttgtaacactt-cacatattggattggagagctgctctc 6438546  T
Q  226 tcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttc-ttccttttaccgcttatcttgtttatgctttggaatctc 324  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||| |||||||||||| ||||||||||||||| |||  | |||    
T  6438545 tcccccagattaggccatattggctgaactgggacaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgc-ttgttagctc 6438447  T
Q  325 -ttgtgtggttttgctatacactagcttagggctgttttgttgttgtttg 373  Q
     |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  6438446 tttgtgtggttttgctatacactagcttagggctg-tttgttgttgtttg 6438398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 27 - 371
Target Start/End: Original strand, 28155412 - 28155756
Alignment:
Q  27 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaatacca 126  Q
    ||||| || ||| ||||| ||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  28155412 atggggtgtgtgcctttgatgagagtgtttcttaggttgggaaaaacattgtaatcaccttgggatttagggttcatagtgtgagagtgggaaaatacca 28155511  T
Q  127 aagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagtcttgtaaccttttgtaacactttcacatattggattggagagctgctctct 226  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  28155512 aagggtaga-tctagggtttgttcatgtgtaaagcttgaaagctaaattcttgtaaccttttgtaacactttctcatattggattggagagctgctctct 28155610  T
Q  227 cccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttctt-ccttttaccgcttatcttgtttatgctttggaatctct 325  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| || ||||||| ||||||||||||||||| |  | ||||    
T  28155611 cccccagattaggccacattggctgaactgggtcaacaatcttgttcggtgttttgttctttccatttaccgtttatcttgtttatgctt-gttagctct 28155709  T
Q  326 t-gtgtggttttgctatacactag-cttagggctgttttgttgttgtt 371  Q
    | ||||||||||||||||||| || | || ||||||||||||||||||    
T  28155710 tagtgtggttttgctatacacaagtcata-ggctgttttgttgttgtt 28155756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 40 - 371
Target Start/End: Complemental strand, 6005650 - 6005317
Alignment:
Q  40 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtagaat 137  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||  |||||||||||||||| ||||||||||||||||||||||  |    
T  6005650 ctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgagggtgggaaaataccaaagggtagg-t 6005552  T
Q  138 ctagggtttgttcatgtgtaaagcttgaaa-gctagagtcttgtaac-cttttgtaacactttcacatattggattggagagctgctctctcccccagat 235  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  6005551 ctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccagat 6005452  T
Q  236 taggccatattggctgaactgggtcaacaatcttgtttggtgttttgttc--ttccttttaccgcttatcttgtttatgctttggaatctctt-gtgtgg 332  Q
    ||||||| ||||||||||||||||||||||||||| | |||| |||||||  ||||||||| || ||||||||  ||||| |||  | ||||| ||||||    
T  6005451 taggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttccttttatcgtttatcttg--tatgc-ttgttagctcttagtgtgg 6005356  T
Q  333 ttttgctatacacta-gcttagggctgttttgttgttgtt 371  Q
    |||||||||||| || ||||| ||||||||||||||||||    
T  6005355 ttttgctatacattaggctta-ggctgttttgttgttgtt 6005317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 40 - 371
Target Start/End: Complemental strand, 16838977 - 16838644
Alignment:
Q  40 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtagaat 137  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||| |    
T  16838977 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtaga-t 16838879  T
Q  138 ctagggtttgttcatgtgtaaagcttgaa-agctagagtcttgtaac-cttttgtaacactttcacatattggattggagagctgctctctcccccagat 235  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  16838878 ctagggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccagat 16838779  T
Q  236 taggccatattggctgaactgggtcaacaatcttgtttggtgttttgttc--ttccttttaccgcttatcttgtttatgctttggaatctctt-gtgtgg 332  Q
    || |||| ||||||||||||||||||||||||||| | |||| |||||||  || |||||| || ||||||||  ||||| |||  | ||||| ||||||    
T  16838778 taagccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcgttttcttttatcgtttatcttg--tatgc-ttgttagctcttagtgtgg 16838683  T
Q  333 ttttgctatacacta-gcttagggctgttttgttgttgtt 371  Q
    |||||||||||| || ||||| ||||||||||||||||||    
T  16838682 ttttgctatacattaggctta-ggctgttttgttgttgtt 16838644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 40 - 280
Target Start/End: Original strand, 33330297 - 33330540
Alignment:
Q  40 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtagaat 137  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||| |    
T  33330297 ctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtaga-t 33330395  T
Q  138 ctagggtttgttcatgtgtaaagcttga-aagctagagtcttgtaac-cttttgtaacactttcacatattggattggagagctgctctctcccccagat 235  Q
    |||||||||  ||||||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  33330396 ctagggttttgtcatgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccagat 33330495  T
Q  236 taggccatattggctgaactgggtcaacaatcttgtttggtgttt 280  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||    
T  33330496 taggccacattggctgaactgggtcaacaatcttgcttggtgttt 33330540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 40 - 280
Target Start/End: Original strand, 33335794 - 33336037
Alignment:
Q  40 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtagaat 137  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||| |    
T  33335794 ctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtaga-t 33335892  T
Q  138 ctagggtttgttcatgtgtaaagcttga-aagctagagtcttgtaac-cttttgtaacactttcacatattggattggagagctgctctctcccccagat 235  Q
    |||||||||  ||||||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  33335893 ctagggttttgtcatgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccagat 33335992  T
Q  236 taggccatattggctgaactgggtcaacaatcttgtttggtgttt 280  Q
    |||| || ||||||||||||||||||||||||||| |||||||||    
T  33335993 taggtcacattggctgaactgggtcaacaatcttgcttggtgttt 33336037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 91 - 371
Target Start/End: Original strand, 5674685 - 5674965
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttg-ttcatgtgtaaagcttgaaagcta--gagtcttgtaaccttt 187  Q
    |||||||||||||| |||||||||||| ||| ||||||||||||||||||||  ||| ||| ||||| ||||||| ||||||  |  |||||||||| ||    
T  5674685 ttttagggttcatattgtgagagtggggaaacaccaaagggtagaatctaggtcttgtttcttgtgt-aagcttgcaagctattgtttcttgtaaccctt 5674783  T
Q  188 tgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgt-tttgttc 285  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||    
T  5674784 tgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatc-tctttggtgtgtttgttc 5674882  T
Q  286 ttccttttaccgcttatcttgtttatgctttggaatctcttgtgtggttttgctatacactagcttagggct-gttttgttgttgtt 371  Q
    || | |||   |||||| |||||  ||||||| | |||||| |||||| ||||| ||||||||  ||||||| ||||||||||||||    
T  5674883 tttc-tttcttgcttatattgtt--tgctttgtattctctt-tgtggtgttgctctacactagactagggctggttttgttgttgtt 5674965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 5674554 - 5674633
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  5674554 caaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 5674633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 158 - 269
Target Start/End: Original strand, 5757462 - 5757575
Alignment:
Q  158 aagcttgaaagctagagtcttgtaaccttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaact 255  Q
    ||||||| ||||||   |||||||||  ||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||| | |||||    
T  5757462 aagcttgcaagctattttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaact 5757561  T
Q  256 gggtcaacaatctt 269  Q
    ||||||||||||||    
T  5757562 gggtcaacaatctt 5757575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 175 - 269
Target Start/End: Complemental strand, 21356132 - 21356036
Alignment:
Q  175 tcttgtaaccttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 269  Q
    |||||||||  || |||||||||||| |||| ||||||||||||||||||||||| |||||||||| |||||||| | |||||||||||||||||||    
T  21356132 tcttgtaactcttagtaacactttcatcatagtggattggagagctgctctctcctccagattaggtcatattggaccgaactgggtcaacaatctt 21356036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 185 - 270
Target Start/End: Original strand, 10077176 - 10077263
Alignment:
Q  185 ttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    |||||||||||||||| |||| |||||||||| ||||||||||||||||||||||| |||||||| | ||| ||||||||||||||||    
T  10077176 ttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaattgggtcaacaatcttg 10077263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 175 - 270
Target Start/End: Original strand, 5572241 - 5572339
Alignment:
Q  175 tcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    ||||||||| ||||||||||||||||| |||| |||||||||| |||||||||||||| |||||||| |||||||| | ||| ||||||||||||||||    
T  5572241 tcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccctagattaggtcatattggaccgaattgggtcaacaatcttg 5572339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 186 - 270
Target Start/End: Original strand, 31086485 - 31086571
Alignment:
Q  186 tttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    ||||||||||||||| |||| |||||||||||| |||||||||||| |||||||  |||||||| ||||||||||||||||||||||    
T  31086485 tttgtaacactttcatcatagtggattggagagttgctctctcccctagattagatcatattggactgaactgggtcaacaatcttg 31086571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 91 - 292
Target Start/End: Complemental strand, 22709188 - 22708996
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagtcttgtaaccttttgt 190  Q
    |||||||||||||| |||||||||||| ||| || || |||||||| |||||  |||||| ||||||| ||||| ||||||     || |    | ||||    
T  22709188 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaaactaggacttgttcttgtgtaa-gcttgcaagcta-----tttt----tcttgt 22709099  T
Q  191 aacactttca-catattggattggagagctgctctctcccccagattaggccatattg-gctgaactgggtcaacaatcttgtttggtgt-tttgttctt 287  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||  |||||||  | ||||| |||||||||  || |||||||| |||||||||    
T  22709098 aacactttcatcatagtggattggagagctgctctctcccccagattagatcatattgaaccgaactaggtcaacaa--ttttttggtgtgtttgttctt 22709001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 185 - 269
Target Start/End: Complemental strand, 4630040 - 4629954
Alignment:
Q  185 ttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 269  Q
    |||||||||||||||| | || ||||||||||||||||||||| ||| |||||||| |||||||| |||||||| ||||||||||||    
T  4630040 ttttgtaacactttcatcttagtggattggagagctgctctcttccctagattaggtcatattggactgaactgagtcaacaatctt 4629954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 175 - 270
Target Start/End: Complemental strand, 31979610 - 31979512
Alignment:
Q  175 tcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    ||||||||| |||||| |||||||||| | || |||||||||| ||||||||||||||||||||| | |||||||| | ||||||||||||||||||||    
T  31979610 tcttgtaactcttttgcaacactttcatcttagtggattggagggctgctctctcccccagattatgtcatattggaccgaactgggtcaacaatcttg 31979512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 270
Target Start/End: Complemental strand, 22963796 - 22963699
Alignment:
Q  175 tcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattg-gctgaactgggtcaacaatcttg 270  Q
    ||||||||| ||||||||||||||||| |||| |||||||||| |||||||||| ||||||||| || |||||||  | ||||||||||||||||||||    
T  22963796 tcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctct-ccccagatttggtcatattgcaccgaactgggtcaacaatcttg 22963699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 270
Target Start/End: Original strand, 23824597 - 23824694
Alignment:
Q  175 tcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattg-gctgaactgggtcaacaatcttg 270  Q
    ||||||||| ||||||||||||||||| |||| |||||||||| |||||||||| ||||||||| || |||||||  | ||||||||||||||||||||    
T  23824597 tcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctct-ccccagatttggtcatattgcaccgaactgggtcaacaatcttg 23824694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 175 - 257
Target Start/End: Original strand, 21801344 - 21801429
Alignment:
Q  175 tcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgg 257  Q
    ||||||||| ||||||||||||||| | | || |||||||||||||||||| ||||||||||||||| |||||||| |||||||||    
T  21801344 tcttgtaactcttttgtaacacttttatcttagtggattggagagctgctcgctcccccagattaggtcatattggactgaactgg 21801429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 187 - 270
Target Start/End: Complemental strand, 31936671 - 31936586
Alignment:
Q  187 ttgtaacactttcacat-attggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    |||||||||||||| || | |||||||||||||||||||||| |||||| |||| |||||||| | ||||| ||||||||||||||    
T  31936671 ttgtaacactttcatattagtggattggagagctgctctctctcccagactaggtcatattggaccgaactaggtcaacaatcttg 31936586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 224 - 280
Target Start/End: Complemental strand, 5343527 - 5343471
Alignment:
Q  224 tctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttt 280  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||| | |||||||    
T  5343527 tctcccctagattaggccacattggctgaactgggtcaacaatcttgctcggtgttt 5343471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 248
Target Start/End: Complemental strand, 18232942 - 18232867
Alignment:
Q  175 tcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg 248  Q
    ||||||||| ||||||||||||||||| |||| || ||||||| | ||||||||||||||||||||| ||||||||    
T  18232942 tcttgtaactcttttgtaacactttcatcatagtgaattggagggttgctctctcccccagattaggtcatattgg 18232867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 270
Target Start/End: Original strand, 5017482 - 5017567
Alignment:
Q  187 ttgtaacactttca-catattggattggagagctgctctctcccccagattaggccata-ttggctgaactgggtcaacaatcttg 270  Q
    |||||||||||||| |||| | |||||||| | |||||||||||| |||||||| |||| ||| | ||||||||||||||||||||    
T  5017482 ttgtaacactttcatcatagtagattggagggttgctctctcccctagattaggtcatatttgaccgaactgggtcaacaatcttg 5017567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 5343710 - 5343628
Alignment:
Q  40 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaa 120  Q
    ||||| ||||||||  |||| |||||||||||  ||||||||||||||||||| ||  ||||||||||||||||  |||||||    
T  5343710 ctttgatgagagtgaatcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgaggttgggaaa 5343628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 12195575 - 12195515
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  12195575 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 12195515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 5017304 - 5017364
Alignment:
Q  29 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  5017304 gggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 5017364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 22709316 - 22709241
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 89  Q
    |||||||||||||    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||    
T  22709316 caaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgg 22709241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 4816291 - 4816231
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  4816291 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 4816231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 5273276 - 5273216
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  5273276 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 5273216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 19704627 - 19704567
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  19704627 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 19704567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 20915416 - 20915356
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  20915416 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 20915356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 26932622 - 26932562
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    |||||||||| | |||||||||||||||| |||| || ||||| | |||||||||||||||    
T  26932622 tggattggagggttgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 26932562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 29754769 - 29754709
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  29754769 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 29754709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 33309110 - 33309170
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  33309110 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 33309170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 282; Significance: 1e-158; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 10 - 373
Target Start/End: Original strand, 9224231 - 9224594
Alignment:
Q  10 agcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  9224231 agcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggtttgggaaaacattgtaatcaccttgggttttagggttcatagtgtg 9224330  T
Q  110 agagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagag-tcttgtaaccttttgtaacactttcacatattgg 208  Q
    |||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||| ||||||||    
T  9224331 agagtggggaaacaccaaagggtagagtctagggtttgttcatgtgtaaagcttgaaggctagagttcttctaaccttttgtaacactttctcatattgg 9224430  T
Q  209 attggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttcttccttttaccgcttatcttgtt 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||    
T  9224431 attggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttcttccttttaccgcttatcttgtt 9224529  T
Q  309 tatgctttggaatctc-ttgtgtggttttgctatacactagcttagggctgttttgttgttgtttg 373  Q
    | |||||||| ||||| ||||||||||||||||||||||||  |||||||||||||||||||||||    
T  9224530 t-tgctttggtatctctttgtgtggttttgctatacactagtctagggctgttttgttgttgtttg 9224594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 10 - 373
Target Start/End: Original strand, 9229018 - 9229381
Alignment:
Q  10 agcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  9229018 agcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggtttgggaaaacattgtaatcaccttgggttttagggttcatagtgtg 9229117  T
Q  110 agagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagag-tcttgtaaccttttgtaacactttcacatattgg 208  Q
    |||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||| ||||||||    
T  9229118 agagtggggaaacaccaaagggtagagtctagggtttgttcatgtgtaaagcttgaaggctagagttcttctaaccttttgtaacactttctcatattgg 9229217  T
Q  209 attggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttcttccttttaccgcttatcttgtt 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  | |||||||||||||||||||||||||||||||||||    
T  9229218 attggagagctgctctctcccccagattaggccatattggctgaactgggttaacaatctt-ctcggtgttttgttcttccttttaccgcttatcttgtt 9229316  T
Q  309 tatgctttggaatctc-ttgtgtggttttgctatacactagcttagggctgttttgttgttgtttg 373  Q
    | |||||||| ||||| ||||||||||||||||||||||||  |||||||||||||||||||||||    
T  9229317 t-tgctttggtatctctttgtgtggttttgctatacactagtctagggctgttttgttgttgtttg 9229381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 13 - 373
Target Start/End: Complemental strand, 51520715 - 51520354
Alignment:
Q  13 aaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtgaga 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||    
T  51520715 aaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattaagaga 51520616  T
Q  113 gtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagag-tcttgtaaccttttgtaacactttcacatattggatt 211  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||    
T  51520615 gtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattggatt 51520516  T
Q  212 ggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttcttccttttaccgcttatcttgtttat 311  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  | ||||||||||||||||||||| | ||||||||||||||    
T  51520515 ggagagctgctctctcccccagattaggccatattggcagaactgggtcaacaatctt-ctcggtgttttgttcttccttttatcacttatcttgtttat 51520417  T
Q  312 gctttggaatctc-ttgtgtggttttgctatacactagcttagggctgttttgttgttgtttg 373  Q
    ||||||  ||||| |||| |||||||||||||||||||  |||||||| ||||||||||||||    
T  51520416 gctttgttatctctttgtatggttttgctatacactagtctagggctgctttgttgttgtttg 51520354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 27 - 371
Target Start/End: Original strand, 45357138 - 45357482
Alignment:
Q  27 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaatacca 126  Q
    ||||| || ||| ||||| |||||| || |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  45357138 atggggtgtgtgcctttgatgagagagtttcttaggttgggaaaaacattgtaatcaccttggggtttagggttcatagtgtgagagtgggaaaatacca 45357237  T
Q  127 aagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagtcttgtaaccttttgtaacactttcacatattggattggagagctgctctct 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  45357238 aagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagtcttgtaaccttttgtaacactttctcatattggattggagagctgctctct 45357337  T
Q  227 cccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttc-ttccttttaccgcttatcttgtttatgctttggaatctct 325  Q
    ||||||||||| |||||||||||||||||||||||||||||||  | |||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  45357338 cccccagattatgccatattggctgaactgggtcaacaatctt-ctcggtgttttgttctttccttttaccgcttatcttgtttgtgctttggaatctct 45357436  T
Q  326 tgtgtggttttgctatacactagcttagggctgttttgttgttgtt 371  Q
    |||||||||||||| ||||||||  |||| ||||||||||||||||    
T  45357437 tgtgtggttttgctttacactagtctaggactgttttgttgttgtt 45357482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 27 - 371
Target Start/End: Original strand, 45347658 - 45348003
Alignment:
Q  27 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaatacca 126  Q
    ||||| || ||| ||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  45347658 atggggtgtgtgcctttgatgagagtgtctcttaggttgggaaaaacattgtaatcaccttggggtttagggttcatagtgtgagagtgggaaaatacca 45347757  T
Q  127 aagggtagaatctagggtttgttcatgtgtaaagcttgaaagctaga-gtcttgtaaccttttgtaacactttcacatattggattggagagctgctctc 225  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  45347758 aagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagaggtcttgtaaccttttgtaacactttctcatattggattggagagctgctctc 45347857  T
Q  226 tcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttc-ttccttttaccgcttatcttgtttatgctttggaatctc 324  Q
    |||||||||||| |||||||||||||||||||||||||||||||  | |||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  45347858 tcccccagattaagccatattggctgaactgggtcaacaatctt-ctcggtgttttgttctttccttttaccgcttatcttgtttgtgctttggaatctc 45347956  T
Q  325 ttgtgtggttttgctatacactagcttagggctgttttgttgttgtt 371  Q
    ||||||||||||||| ||||||||  |||| ||||||||||||||||    
T  45347957 ttgtgtggttttgctttacactagtctaggactgttttgttgttgtt 45348003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 12 - 373
Target Start/End: Complemental strand, 3814281 - 3813921
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtgag 111  Q
    ||||||||||| || ||||| || ||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3814281 caaaggagggatcctatggggtgtgtgtctttgatgagagtgtttcttaggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtgag 3814182  T
Q  112 agtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagtcttgtaaccttttgtaacactttcacatattggatt 211  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3814181 agtgggaaaataccaaagggtaga-tctagggtttgttcatgtgtaaagcttgaaagctagagtcttgtaaccttttgtaacactttcacatattggatt 3814083  T
Q  212 ggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttcttccttttaccgcttatcttgtttat 311  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    |||||||||||||||    
T  3814082 ggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgcatggtgttttgttcttcctttctt-gcttatcttgtttat 3813984  T
Q  312 gctttggaatctc-ttgtgtgg-ttttgctatacactagcttagggctgttttgttgttgtttg 373  Q
    || |||  | ||| |||||||| |||||| |||||||||  |||| ||||||||||||||||||    
T  3813983 gc-ttgttagctctttgtgtggtttttgcgatacactagtctaggactgttttgttgttgtttg 3813921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 27 - 371
Target Start/End: Complemental strand, 5732907 - 5732561
Alignment:
Q  27 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaatacca 126  Q
    ||||| || ||| ||||| ||||||||| |||| |||||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||    
T  5732907 atggggtgtgtgcctttgatgagagtgtttcttaggttgggaaaaacattgtaatcaccttgggattaagggtttatagtgtgagagtgggaaaatacca 5732808  T
Q  127 aagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagtcttgtaaccttttgtaacactttcacatattggattggagagctgctctct 226  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  5732807 aagggtaga-tctagggtttgttcatgtgtaaagcttgaaagctagagtcttgtaaccttttgtaacactttctcatattggattggagagctgctctct 5732709  T
Q  227 cccccagattaggccatattggctgaactgggtcaacaatcttgtttggtg----ttttgttcttccttttaccgcttatcttgtttatgctttggaatc 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||    |||||||||| | ||||||| ||||||||||  |||||||  | |    
T  5732708 cccccagattaggccatattggctgaactgggtcaacaatcttgttcagtgttttttttgttctttcctttaccgtttatcttgtt--tgctttgttagc 5732611  T
Q  323 tc-ttgtgtggttttgctatacactagcttagggctgttttgttgttgtt 371  Q
    || |||||||||||| ||||||||||||||||||||||||||||||||||    
T  5732610 tctttgtgtggttttactatacactagcttagggctgttttgttgttgtt 5732561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 40 - 373
Target Start/End: Complemental strand, 18855956 - 18855624
Alignment:
Q  40 ctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatct 139  Q
    ||||| |||||| || |||| |||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||  |||    
T  18855956 ctttgatgagagagtttcttaggttgggaaaaacattgtaatcaccttgggattgtgggttcatagtgtgagagtgggaaaataccaaagggtagt-tct 18855858  T
Q  140 agggtttgttcatgtgtaaagcttga-aagctagagtcttgtaaccttttgtaacactttcacatattggattggagagctgctctctcccccagattag 238  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18855857 agggtttgttcatgtgtaaagcttgataagctagagtcttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccagattag 18855759  T
Q  239 gccatattggctgaactgggtcaacaatcttgtttggtgttttgttc-ttccttttaccgcttatcttgtttatgctttggaatctc-ttgtgtggtttt 336  Q
    |||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||| ||||||||||||||| |||  | ||| ||||||||||||    
T  18855758 gccatattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgc-ttgttagctctttgtgtggtttt 18855660  T
Q  337 gctatacactagcttagggctgttttgttgttgtttg 373  Q
    |||||||||||||||||||||| ||||||||||||||    
T  18855659 gctatacactagcttagggctg-tttgttgttgtttg 18855624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 139 - 373
Target Start/End: Original strand, 56146664 - 56146899
Alignment:
Q  139 tagggtttgttcatgtgtaaagcttgaaagctagagt-cttgtaaccttttgtaacactttcacatattggattggagagctgctctctcccccagatta 237  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  56146664 tagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccagatta 56146763  T
Q  238 ggccatattggctgaactgggtcaacaatcttgtttggtgttttgttcttccttttaccgcttatcttgtttatgctttggaatctc-ttgtgtggtttt 336  Q
    ||||||||||||||||||||  ||||||||||  | ||||||||||||||||||||| | ||||||||||||||||||||  ||||| ||||||||||||    
T  56146764 ggccatattggctgaactggaccaacaatctt-ctcggtgttttgttcttccttttatcacttatcttgtttatgctttgttatctctttgtgtggtttt 56146862  T
Q  337 gctatacactagcttagggctgttttgttgttgtttg 373  Q
    ||||||||||||  |||||||| ||||||||||||||    
T  56146863 gctatacactagtctagggctgctttgttgttgtttg 56146899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 91 - 371
Target Start/End: Complemental strand, 24742121 - 24741840
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagt--cttgtaacctttt 188  Q
    |||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||| ||||||| ||||||| ||||  ||  ||||||||| |||    
T  24742121 ttttagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgttcttgtgtaa-gcttgaaggctattgtttcttgtaacccttt 24742023  T
Q  189 gtaacactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttctt 287  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  24742022 gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctt-ggtgttttgttctt 24741924  T
Q  288 ccttttaccgcttatcttgtttatgctttggaatctctt-gtgtggttttgctatacactagcttagggctg-ttttgttgttgtt 371  Q
    |||||    ||||||||||||| |||||||| ||||||| ||||||||||||| ||||||||  |||||||| |||||||||||||    
T  24741923 cctttctt-gcttatcttgttt-tgctttggtatctctttgtgtggttttgctctacactagtctagggctgtttttgttgttgtt 24741840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 93 - 371
Target Start/End: Complemental strand, 29760821 - 29760542
Alignment:
Q  93 ttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgtt-catgtgtaaagcttgaaagctagagt--cttgtaaccttttg 189  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||  ||||| | ||||||| ||||| | ||||  ||  ||||||||| ||||    
T  29760821 ttagggttcatagtgtgagagtggggaaacaccaaagggtagaatctaggtcttgtttcttgtgtaa-gcttgcaggctattgtttcttgtaaccctttg 29760723  T
Q  190 taacactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttcttc 288  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  29760722 taacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctt-ggtgttttgttcttc 29760624  T
Q  289 cttttaccgcttatcttgtttatgctttggaatctctt-gtgtggttttgctatacactagcttagggctgttttgttgttgtt 371  Q
    ||||    ||||||||||||| |||||||   |||||| ||||||||||||| ||||||||  ||||| |||||||||||||||    
T  29760623 ctttctt-gcttatcttgttt-tgctttgttctctctttgtgtggttttgctctacactagtctagggttgttttgttgttgtt 29760542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 18712590 - 18712677
Alignment:
Q  10 agcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagg 97  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18712590 agcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgttatcaccttgggttttagg 18712677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 24742253 - 24742174
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24742253 caaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 24742174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 187 - 292
Target Start/End: Original strand, 28468542 - 28468647
Alignment:
Q  187 ttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgt-tttgtt 284  Q
    |||||||||||||| |||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||  |||||||| ||||||    
T  28468542 ttgtaacactttcatcatagtggattggagagctgctctctcctccagattaggtcatattggctgaactgggtcaacaatct--tttggtgtgtttgtt 28468639  T
Q  285 cttccttt 292  Q
    ||||||||    
T  28468640 cttccttt 28468647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 91 - 292
Target Start/End: Original strand, 31985552 - 31985752
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagt-cttgtaaccttttg 189  Q
    |||||||||||| | |||||||||||||||  || || ||||||||  ||||  |||||| ||||||| ||||| ||||||   | ||||||||| ||||    
T  31985552 ttttagggttcacattgtgagagtgggaaac-acaaatgggtagaaattaggacttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttg 31985649  T
Q  190 taacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttgtttggtgt-tttgttct 286  Q
    ||||||||||| |||| ||||||||||||||||||||| |||||||||||| |||||||| | ||||||||||||||||||  |||||||| ||||||||    
T  31985650 taacactttcatcatagtggattggagagctgctctct-ccccagattaggtcatattggaccgaactgggtcaacaatct--tttggtgtgtttgttct 31985746  T
Q  287 tccttt 292  Q
    ||||||    
T  31985747 tccttt 31985752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 29760954 - 29760874
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttggga-aaaacattgtaatcaccttgggt 91  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  29760954 caaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaaacattgtaatcaccttgggt 29760874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 175 - 270
Target Start/End: Complemental strand, 10047476 - 10047378
Alignment:
Q  175 tcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    ||||||||| ||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||| |||||||| | ||||||||||||||||||||    
T  10047476 tcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttg 10047378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 175 - 270
Target Start/End: Complemental strand, 39246091 - 39245993
Alignment:
Q  175 tcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    ||||||||| ||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||| |||||||| | ||||||||||||||||||||    
T  39246091 tcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttg 39245993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 175 - 270
Target Start/End: Original strand, 36315230 - 36315327
Alignment:
Q  175 tcttgtaaccttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    |||||||||  ||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||| |||||    
T  36315230 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacattcttg 36315327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 175 - 270
Target Start/End: Original strand, 36329439 - 36329536
Alignment:
Q  175 tcttgtaaccttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    |||||||||  ||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||| |||||    
T  36329439 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacattcttg 36329536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 184 - 270
Target Start/End: Original strand, 38152449 - 38152537
Alignment:
Q  184 cttttgtaacactttcac-atattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||| | |||||||| | ||||||||||||||||||||    
T  38152449 cttttgtaacactttcaccatagtggattggagagctgctctctcccccagattatgtcatattggaccgaactgggtcaacaatcttg 38152537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 145 - 269
Target Start/End: Original strand, 5396643 - 5396768
Alignment:
Q  145 ttgttcatgtgtaaagcttgaaagctagagtcttgtaaccttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccat 243  Q
    |||||| ||||||| ||||| ||||||   |||||||||  |||| |||||||||| |||| ||||||||||||||||||||||| |||||||||| |||    
T  5396643 ttgttcttgtgtaa-gcttgcaagctattttcttgtaactctttgcaacactttcatcatagtggattggagagctgctctctcctccagattaggtcat 5396741  T
Q  244 attgg-ctgaactgggtcaacaatctt 269  Q
    ||||| | |||||||||||||||||||    
T  5396742 attggaccgaactgggtcaacaatctt 5396768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 175 - 270
Target Start/End: Original strand, 16623293 - 16623391
Alignment:
Q  175 tcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattg-gctgaactgggtcaacaatcttg 270  Q
    ||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||| |||||||  | ||||||||||||||||||||    
T  16623293 tcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcctccagattaggtcatattgaaccgaactgggtcaacaatcttg 16623391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 187 - 272
Target Start/End: Original strand, 5269204 - 5269291
Alignment:
Q  187 ttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttgtt 272  Q
    |||||||||||||| |||| |||||||||| ||||||||||||||||||||||| |||||||| | ||||| ||||||||||||||||    
T  5269204 ttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactaggtcaacaatcttgtt 5269291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 158 - 269
Target Start/End: Original strand, 3796502 - 3796616
Alignment:
Q  158 aagcttgaaagctagagtcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaac 254  Q
    ||||||| ||||||   ||||||||| ||||||||||||||||| |||| |||||| ||||| |||||||||||||| |||||| |||||||| | ||||    
T  3796502 aagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattagagagttgctctctcccccatattaggtcatattggacggaac 3796601  T
Q  255 tgggtcaacaatctt 269  Q
    |||||||||||||||    
T  3796602 tgggtcaacaatctt 3796616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 185 - 268
Target Start/End: Complemental strand, 5143345 - 5143260
Alignment:
Q  185 ttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatct 268  Q
    |||||||||||||||| |||| ||| |||||||||||||||||||||||||||||| |||||||| | ||||| ||||||||||||    
T  5143345 ttttgtaacactttcatcatagtgggttggagagctgctctctcccccagattaggtcatattggaccgaactaggtcaacaatct 5143260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 145 - 268
Target Start/End: Complemental strand, 5147803 - 5147678
Alignment:
Q  145 ttgttcatgtgtaaagcttgaaagctagagtcttgtaacc-ttttgtaacactttca-catattggattggagagctgctctctcccccagattaggcca 242  Q
    |||||| ||||||| ||||| ||||||   |||||||||  |||||||||||||||| |||| |||| ||||||||||||| |||||||| |||||| ||    
T  5147803 ttgttcttgtgtaa-gcttgcaagctattttcttgtaactattttgtaacactttcatcataatggactggagagctgctccctcccccaaattaggtca 5147705  T
Q  243 tattgg-ctgaactgggtcaacaatct 268  Q
    |||||| | ||||||||||||||||||    
T  5147704 tattggaccgaactgggtcaacaatct 5147678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 184 - 270
Target Start/End: Complemental strand, 24333896 - 24333808
Alignment:
Q  184 cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    |||||||||||| |||| |||| ||||||||||||||||||||||||||| |||||| |||||||| | |||||| || ||||||||||    
T  24333896 cttttgtaacacgttcatcatagtggattggagagctgctctctcccccaaattaggtcatattggaccgaactgagttaacaatcttg 24333808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 175 - 268
Target Start/End: Complemental strand, 3777645 - 3777550
Alignment:
Q  175 tcttgtaaccttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatct 268  Q
    |||||||||  ||||||||||||||| |||| |||||||||||||| |||||||| | ||||||||  ||||||| | ||||||||||||||||||    
T  3777645 tcttgtaactctttgtaacactttcatcatagtggattggagagctactctctcctctagattaggttatattggaccgaactgggtcaacaatct 3777550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 264
Target Start/End: Original strand, 6743425 - 6743507
Alignment:
Q  184 cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaaca 264  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||  |||||||| |||||||| | ||||||||||||||    
T  6743425 cttttgtaacactttcatcatagtggattggagggctgctctctcccgtagattaggtcatattggaccgaactgggtcaaca 6743507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 270
Target Start/End: Original strand, 16630680 - 16630778
Alignment:
Q  175 tcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    ||||||||| ||||||||||||||||| |||| ||||||||||||||| ||||||| |||||||| | |||||||| | ||||| ||||||||| ||||    
T  16630680 tcttgtaactcttttgtaacactttcatcatagtggattggagagctgttctctcctccagattatgtcatattggaccgaactaggtcaacaaccttg 16630778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 270
Target Start/End: Original strand, 25862035 - 25862120
Alignment:
Q  187 ttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    |||||||||||||| |||| |||||||||| || ||||||| ||||| |||||| |||||||| | |||||| |||||||||||||    
T  25862035 ttgtaacactttcatcatagtggattggagggccgctctcttccccatattaggtcatattggaccgaactgagtcaacaatcttg 25862120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 28468325 - 28468404
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||    ||||| ||||||||||| | |||  ||||||||||||||||||| ||||||| ||||||||||    
T  28468325 caaaggagggaactctagggttaagtgtctttgtagtgaggatctcttgggttgggaaaaatattgtaaacaccttgggt 28468404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 5112523 - 5112466
Alignment:
Q  32 ttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||||| |||  ||||||||||||||  ||||||||||| ||||||||||    
T  5112523 ttgagtgtctttgttgtgaggttctcttgggttggg--aaacattgtaaacaccttgggt 5112466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 16931849 - 16931789
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  16931849 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 16931789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 16934203 - 16934143
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  16934203 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 16934143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 22780433 - 22780373
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  22780433 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 22780373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 44599898 - 44599838
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  44599898 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 44599838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 3777838 - 3777778
Alignment:
Q  29 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  3777838 gggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 3777778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 5396479 - 5396539
Alignment:
Q  29 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  5396479 gggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 5396539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 16623101 - 16623161
Alignment:
Q  29 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  16623101 gggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 16623161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 16628680 - 16628740
Alignment:
Q  29 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  16628680 gggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 16628740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 248
Target Start/End: Original strand, 39774305 - 39774380
Alignment:
Q  175 tcttgtaacct-tttgtaacactttcacat-attggattggagagctgctctctcccccagattaggccatattgg 248  Q
    ||||||||||| |||||| ||||||||  | | ||||||||||||||||||| ||||||||| |||| ||||||||    
T  39774305 tcttgtaacctatttgtatcactttcattttagtggattggagagctgctctatcccccagagtaggtcatattgg 39774380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 270
Target Start/End: Complemental strand, 54867269 - 54867183
Alignment:
Q  185 ttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    |||||||||| ||||| |||| | ||||| || |||||||||||||| ||| |||| |||||||| | ||||||||||||||||||||    
T  54867269 ttttgtaacattttcatcatagttgattgaagggctgctctctcccc-agactaggtcatattggaccgaactgggtcaacaatcttg 54867183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 5269008 - 5269066
Alignment:
Q  29 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 89  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||    
T  5269008 gggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgg 5269066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 6743226 - 6743283
Alignment:
Q  32 ttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  6743226 ttgagtgtctttgtagcgaggatctcttgggttggg--aaacattgtaaacaccttgggt 6743283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 6765117 - 6765177
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  6765117 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 6765177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 7941596 - 7941656
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  7941596 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 7941656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 18709224 - 18709164
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    ||||||||||  ||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  18709224 tggattggaggactgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 18709164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 22782798 - 22782738
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | ||||||| |||||||    
T  22782798 tggattggagggctgctctctcccccagactaggtcagattggaccgaactggatcaacaa 22782738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 25861841 - 25861898
Alignment:
Q  29 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttg 88  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| |||||||    
T  25861841 gggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttg 25861898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 10 - 373
Target Start/End: Original strand, 34886 - 35249
Alignment:
Q  10 agcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  34886 agcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggtttgggaaaacattgtaatcaccttgggttttagggttcatagtgtg 34985  T
Q  110 agagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagag-tcttgtaaccttttgtaacactttcacatattgg 208  Q
    |||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||| ||||||||    
T  34986 agagtggggaaacaccaaagggtagagtctagggtttgttcatgtgtaaagcttgaaggctagagttcttctaaccttttgtaacactttctcatattgg 35085  T
Q  209 attggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttcttccttttaccgcttatcttgtt 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  | |||||||||||||||||||||||||||||||||||    
T  35086 attggagagctgctctctcccccagattaggccatattggctgaactgggttaacaatctt-ctcggtgttttgttcttccttttaccgcttatcttgtt 35184  T
Q  309 tatgctttggaatctc-ttgtgtggttttgctatacactagcttagggctgttttgttgttgtttg 373  Q
    | |||||||| ||||| ||||||||||||||||||||||||  |||||||||||||||||||||||    
T  35185 t-tgctttggtatctctttgtgtggttttgctatacactagtctagggctgttttgttgttgtttg 35249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 278; Significance: 1e-155; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 10 - 373
Target Start/End: Original strand, 7289750 - 7290114
Alignment:
Q  10 agcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7289750 agcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattgtg 7289849  T
Q  110 agagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagag-tcttgtaaccttttgtaacactttcacatattgg 208  Q
    |||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||    
T  7289850 agagtggggaaacaccaaagggtagaatatagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattgg 7289949  T
Q  209 attggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttcttccttttaccgcttatcttgtt 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||| | |||||||||||    
T  7289950 attggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttcttccttttatcacttatcttgtt 7290048  T
Q  309 tatgctttggaatctc-ttgtgtggttttgctatacactagcttagggctgttttgttgttgtttg 373  Q
    |||| ||||  ||||| ||||||||||||||||||||||||  |||||||| ||||||||||||||    
T  7290049 tatggtttgttatctctttgtgtggttttgctatacactagtctagggctgctttgttgttgtttg 7290114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 27 - 368
Target Start/End: Original strand, 39784665 - 39785006
Alignment:
Q  27 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaatacca 126  Q
    ||||| || ||| ||||| |||||| ||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  39784665 atggggtgtgtgcctttgatgagagagtctcttaggttgggaaaaacattgtaatcaccttgggattttgggttcatagtgtgagagtgggaaaatacca 39784764  T
Q  127 aagggtagaatctagggtttgttcatgtgtaaagcttga-aagctagagtcttgtaaccttttgtaacactttcacatattggattggagagctgctctc 225  Q
    ||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  39784765 aagggtagt-tctagggtttgttcatgtgtaaagcttgataagctagagtcttgtaaccttttgtaacactt-cacatattggattggagagctgctctc 39784862  T
Q  226 tcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttc-ttccttttaccgcttatcttgtttatgctttggaatctc 324  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  39784863 tcccccagattaggccatattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgcttatcttgtttgtgctttggaatctc 39784962  T
Q  325 ttgtgtggttttgctatacactagcttagggctgttttgttgtt 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  39784963 ttgtgtggttttgctatacactagcttagggctgttttgttgtt 39785006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 12 - 371
Target Start/End: Original strand, 25328105 - 25328463
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtgag 111  Q
    ||||||||||| || |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||    
T  25328105 caaaggagggatcctatgggttgtgtgtctttgatgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgtgag 25328204  T
Q  112 agtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagtcttgtaaccttttgtaacactttcacatattggatt 211  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  25328205 agtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtcttgtaaccttttgtaacactttctcatattggatt 25328304  T
Q  212 ggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttc-ttccttttaccgcttatcttgttta 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||| || | ||||||| |||||| |||||    
T  25328305 ggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttcttttcctttaccgtttatctcgttta 25328403  T
Q  311 tgctttggaatctcttgtgtggttttgctatacactagcttagggctgttttgttgttgtt 371  Q
    || ||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  25328404 tgttttggtatctcttgtgtggttttgctatacactag-ttagggttgttttgttgttgtt 25328463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 91 - 373
Target Start/End: Complemental strand, 6311477 - 6311195
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagt--cttgtaacctttt 188  Q
    |||||||||||||  |||||||||||| ||| |||||||||||||||||||||||||| | ||||||||||||||| ||||||||  |||||||||||||    
T  6311477 ttttagggttcatcttgtgagagtggggaaacaccaaagggtagaatctagggtttgt-cttgtgtaaagcttgaaggctagagtttcttgtaacctttt 6311379  T
Q  189 gtaacactttcacatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttcttc 288  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||    
T  6311378 gtaacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctc-ggtgttttgttcttc 6311280  T
Q  289 cttttaccgcttatcttgtttatgctttggaatctctt-gtgtggttttgctatacactagcttagggctgttttgttgttgtttg 373  Q
    ||||    |||||||||||||||||||||  ||||||| ||||||||||||||||||||||  |||||||| ||||||||||||||    
T  6311279 ctttctt-gcttatcttgtttatgctttgttatctcttagtgtggttttgctatacactagtctagggctgctttgttgttgtttg 6311195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 40 - 371
Target Start/End: Complemental strand, 35745624 - 35745291
Alignment:
Q  40 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtagaat 137  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||  |||||||||||||||| ||||||||||||||||||||||  |    
T  35745624 ctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgagggtgggaaaataccaaagggtagg-t 35745526  T
Q  138 ctagggtttgttcatgtgtaaagcttgaaa-gctagagtcttgtaac-cttttgtaacactttcacatattggattggagagctgctctctcccccagat 235  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  35745525 ctagggtttgttcatgtgtaaagcttgaaaagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccagat 35745426  T
Q  236 taggccatattggctgaactgggtcaacaatcttgtttggtgttttgttc--ttccttttaccgcttatcttgtttatgctttggaatctctt-gtgtgg 332  Q
    ||||||| ||||||||||||||||||||||||||| | |||| |||||||  ||||||||| || ||||||||  ||||| |||  | ||||| ||||||    
T  35745425 taggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttccttttatcgtttatcttg--tatgc-ttgttagctcttagtgtgg 35745330  T
Q  333 ttttgctatacacta-gcttagggctgttttgttgttgtt 371  Q
    |||||||||||| || ||||| ||||||||||||||||||    
T  35745329 ttttgctatacattaggctta-ggctgttttgttgttgtt 35745291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 91 - 371
Target Start/End: Complemental strand, 36979558 - 36979277
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagt--cttgtaacctttt 188  Q
    |||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||| ||||||| ||||||| ||||  ||  ||||||||| |||    
T  36979558 ttttagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgttcttgtgtaa-gcttgaaggctattgtttcttgtaacccttt 36979460  T
Q  189 gtaacactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttctt 287  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  36979459 gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctt-ggtgttttgttctt 36979361  T
Q  288 ccttttaccgcttatcttgtttatgctttggaatctctt-gtgtggttttgctatacactagcttagggctg-ttttgttgttgtt 371  Q
    |||||    ||||||||||||| |||||||| ||||||| ||||||||||||| ||||||||  |||||||| |||||||||||||    
T  36979360 cctttctt-gcttatcttgttt-tgctttggtatctctttgtgtggttttgctctacactagtctagggctgtttttgttgttgtt 36979277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 40 - 307
Target Start/End: Original strand, 10684116 - 10684388
Alignment:
Q  40 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtagaat 137  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||  ||||||||||||||||  ||||||| |||||||||||||  |    
T  10684116 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgaggttgggaaattaccaaagggtagg-t 10684214  T
Q  138 ctagggtttgttcatgtgtaaagcttga-aagctagagtcttgtaac-cttttgtaacactttcacatattggattggagagctgctctctcccccagat 235  Q
    |||||||||  || |||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  10684215 ctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccagat 10684314  T
Q  236 taggccatattggctgaactgggtcaacaatcttgtttggtgttttgttc--ttccttttaccgcttatcttgt 307  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||  || |||||| || |||||||||    
T  10684315 taggccacattggctgaactgggtcaacaatcttgcttggtgttttgttcgttttcttttatcgtttatcttgt 10684388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 92 - 371
Target Start/End: Original strand, 33037724 - 33038004
Alignment:
Q  92 tttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagt--cttgtaaccttttg 189  Q
    ||||||||||||| |||||||||||| ||| ||  | |||||||||||||||||||||| ||||||| ||||||| ||||  ||  ||||||||| ||||    
T  33037724 tttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggtttgttcttgtgtaa-gcttgaaggctattgtttcttgtaaccctttg 33037822  T
Q  190 taacactttcacatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttcttcc 289  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |    
T  33037823 taacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-cttggtgttttgttctt-c 33037920  T
Q  290 ttttaccgcttatcttgtttatgctttggaatctc-ttgtgtggttttgctatacactagcttagggctgtt--ttgttgttgtt 371  Q
    ||||   ||||||||||||| |||||||| ||||| ||||||||||||||| ||||||||  ||||||||||  |||||||||||    
T  33037921 ttttcttgcttatcttgttt-tgctttggtatctctttgtgtggttttgctctacactagtctagggctgtttattgttgttgtt 33038004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 91 - 371
Target Start/End: Complemental strand, 30655827 - 30655543
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagt--cttgtaacctttt 188  Q
    |||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||| ||||||| ||||||| ||||  ||  ||||||||| |||    
T  30655827 ttttagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgttcttgtgtaa-gcttgaaggctattgtttcttgtaacccttt 30655729  T
Q  189 gtaacactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtg----ttttgt 283  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||    ||||||    
T  30655728 gtaacactttcatcatattagattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-cttggtgttttttttgt 30655630  T
Q  284 tcttccttttaccgcttatcttgtttatgctttggaatctct-tgtgtggttttgctatacactagcttagggctgttttgttgttgtt 371  Q
    |||||| |||   |||||||||||||||||||||  |||||| |||||||||||||| ||||||||  |||||||||||| ||||||||    
T  30655629 tcttcc-tttcttgcttatcttgtttatgctttgttatctctatgtgtggttttgctctacactagtctagggctgtttt-ttgttgtt 30655543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 91 - 371
Target Start/End: Original strand, 4759991 - 4760273
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagt--cttgtaacctttt 188  Q
    |||||||||||||| |||||||||||| ||| ||  | ||||||||||||||| |||||| ||||||| ||||||| ||||  ||  ||||||||| |||    
T  4759991 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaacccttt 4760089  T
Q  189 gtaacactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttctt 287  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || | ||||||||||||    
T  4760090 gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaatcttctt-gatgttttgttctt 4760188  T
Q  288 ccttttaccgcttatcttgtttatgctttggaatctctt-gtgtggttttgctatacactagcttagggctg-ttttgttgttgtt 371  Q
    |||||    |||||||||||||||||||||  ||||||| ||||||||||||| ||||||||  |||||||| |||||||||||||    
T  4760189 cctttctt-gcttatcttgtttatgctttgttatctctttgtgtggttttgctctacactagtctagggctgtttttgttgttgtt 4760273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 91 - 339
Target Start/End: Original strand, 18853083 - 18853332
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagt--cttgtaacc-ttt 187  Q
    |||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||| ||||||| ||||||| ||||  ||  ||||||||| |||    
T  18853083 ttttagggttcatattgtgagagtggggaaataccaaagggtaaaatctagggtttgttcttgtgtaa-gcttgaatgctattgtttcttgtaacccttt 18853181  T
Q  188 tgtaacactttcac-atattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttct 286  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  18853182 tgtaacactttcattatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-cttggtgttttgttct 18853280  T
Q  287 tccttttaccgcttatcttgtttatgctttggaatctc-ttgtgtggttttgct 339  Q
    ||| |||   ||||||||||||| |||||||| ||||| |||||||||||||||    
T  18853281 tcc-tttcttgcttatcttgttt-tgctttggtatctctttgtgtggttttgct 18853332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 91 - 339
Target Start/End: Original strand, 18870477 - 18870726
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagt--cttgtaacc-ttt 187  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||| ||||  ||  ||||||||| |||    
T  18870477 ttttagggttcatattgtgagagtggggaaataccaaagggtagaatctagggtttgttcttgtgtaa-gcttgaatgctattgtttcttgtaacccttt 18870575  T
Q  188 tgtaacactttcac-atattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttct 286  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||    
T  18870576 tgtaacactttcattatattggattggagagctgctctctcccccagattaggccatattggatgaactgggtcaacaatctt-cttggtgttttgttct 18870674  T
Q  287 tccttttaccgcttatcttgtttatgctttggaatctc-ttgtgtggttttgct 339  Q
    ||| |||   ||||||||||||| |||||||| ||||| |||||||||||||||    
T  18870675 tcc-tttcttgcttatcttgttt-tgctttggtatctctttgtgtggttttgct 18870726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 91 - 371
Target Start/End: Original strand, 10689058 - 10689340
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaa-gggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagt--cttgtaaccttt 187  Q
    |||||||||||||| |||||||||||| ||| | || | ||||||||||||||| |||||| ||||||| ||||||| ||||  ||  ||||||||| |     
T  10689058 ttttagggttcatattgtgagagtggggaaacaacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaaccctc 10689156  T
Q  188 tgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttct 286  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  10689157 tgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-cttggtgttttgttct 10689255  T
Q  287 tcctt--ttaccgcttatcttgtttatgctttggaatctc-ttgtgtggttttgctatacactagcttagggctg-ttttgttgttgtt 371  Q
    |||||  |||   |||||||||||| |||||||| ||||| ||||||||||||||| |||||||   ||||| || |||||||||||||    
T  10689256 tcctttctta---cttatcttgttt-tgctttggtatctctttgtgtggttttgctctacactacactagggttgtttttgttgttgtt 10689340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 91 - 292
Target Start/End: Original strand, 1261871 - 1262073
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagcta-gagtcttgtaaccttttg 189  Q
    |||||||||||||| |||||||||||| ||| || || ||||||||||||||  |||| | ||||| ||||||| ||||||    |||||||||| ||||    
T  1261871 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaatctaggtcttgtacttgtgt-aagcttgcaagctatttttcttgtaaccctttg 1261969  T
Q  190 taacactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgt-tttgttctt 287  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||| |||||||||    
T  1261970 taacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggttgaactgggtcaacaatctt-tttggtgtgtttgttctt 1262068  T
Q  288 ccttt 292  Q
    |||||    
T  1262069 ccttt 1262073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 91 - 292
Target Start/End: Original strand, 31071146 - 31071349
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagcta-gagtcttgtaaccttttg 189  Q
    |||||||||||||| |||||||||||| ||| || || |||||||| |||||  |||||| ||||| ||||||| ||||||    |||||||||| ||||    
T  31071146 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaaactaggacttgttcttgtgt-aagcttgcaagctatttttcttgtaaccctttg 31071244  T
Q  190 taacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttgtttggtgt-tttgttct 286  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||| | ||||| ||||||||||||| |||||||| ||||||||    
T  31071245 taacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactcggtcaacaatctt-tttggtgtgtttgttct 31071343  T
Q  287 tccttt 292  Q
    ||||||    
T  31071344 tccttt 31071349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 187 - 292
Target Start/End: Complemental strand, 26287985 - 26287879
Alignment:
Q  187 ttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgt-tttgtt 284  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  26287985 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-tttggtgtgtttgtt 26287887  T
Q  285 cttccttt 292  Q
    ||||||||    
T  26287886 cttccttt 26287879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 187 - 292
Target Start/End: Complemental strand, 26301242 - 26301136
Alignment:
Q  187 ttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgt-tttgtt 284  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  26301242 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-tttggtgtgtttgtt 26301144  T
Q  285 cttccttt 292  Q
    ||||||||    
T  26301143 cttccttt 26301136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 187 - 292
Target Start/End: Complemental strand, 26313236 - 26313130
Alignment:
Q  187 ttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgt-tttgtt 284  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  26313236 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-tttggtgtgtttgtt 26313138  T
Q  285 cttccttt 292  Q
    ||||||||    
T  26313137 cttccttt 26313130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 6311613 - 6311532
Alignment:
Q  10 agcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6311613 agcaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 6311532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 18870345 - 18870424
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18870345 caaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 18870424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 12 - 103
Target Start/End: Original strand, 25327979 - 25328070
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcat 103  Q
    ||||||||||| || |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25327979 caaaggagggatcctatgggttgtgtgtctttgatgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcat 25328070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 30655959 - 30655880
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30655959 caaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 30655880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 10688924 - 10689003
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  10688924 caaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 10689003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 18852951 - 18853030
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18852951 caaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgggt 18853030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 33037592 - 33037671
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  33037592 caaaggagggaaccaaagggttgagtgtcttcgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 33037671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 184 - 270
Target Start/End: Original strand, 26403240 - 26403328
Alignment:
Q  184 cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||    
T  26403240 cttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttg 26403328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 4759857 - 4759938
Alignment:
Q  11 gcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttggg-aaaaacattgtaatcaccttgggt 91  Q
    |||||||||| |||||| ||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  4759857 gcaaaggaggtaaccaaagggttgagtgtctttgtagagagagtctcttgggttgggaaaaaacattgtaatcaccttgggt 4759938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 175 - 269
Target Start/End: Complemental strand, 4456124 - 4456028
Alignment:
Q  175 tcttgtaaccttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 269  Q
    |||||||||  ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| | |||| |||||| |||||||    
T  4456124 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggaccgaaccgggtcagcaatctt 4456028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 1261741 - 1261820
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  1261741 caaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 1261820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 36979689 - 36979611
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    ||||| |||||||||| ||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||    
T  36979689 caaagaagggaaccaaagggttgagtgtctttgtagagagtgtctcttaggttggg-aaaacattgtaatcaccttgggt 36979611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 175 - 266
Target Start/End: Complemental strand, 7412437 - 7412344
Alignment:
Q  175 tcttgtaaccttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaat 266  Q
    |||||||||  ||||||||||||||| |||| ||||||||||||||||||||||||||| |||||| |||||||| | ||||||||||||||||    
T  7412437 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccatattaggtcatattggaccgaactgggtcaacaat 7412344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 175 - 269
Target Start/End: Original strand, 19175755 - 19175851
Alignment:
Q  175 tcttgtaaccttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 269  Q
    |||||||||  ||||||||||||||| |||| |||||||||||| ||||||||||||||||||||| |||||||| | ||||| |||||||||||||    
T  19175755 tcttgtaactctttgtaacactttcatcatagtggattggagagttgctctctcccccagattaggtcatattggaccgaactaggtcaacaatctt 19175851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 145 - 270
Target Start/End: Original strand, 23799548 - 23799675
Alignment:
Q  145 ttgttcatgtgtaaagcttgaaagctagagtcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggcca 242  Q
    |||||| ||||||| ||||| ||||||   ||||||||| ||||||||||||||||| |||| |||||||||| |||||||||||| ||| |||||| ||    
T  23799548 ttgttcttgtgtaa-gcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcctccaaattaggtca 23799646  T
Q  243 tattgg-ctgaactgggtcaacaatcttg 270  Q
    |||||| | ||||||||||||||||||||    
T  23799647 tattggaccgaactgggtcaacaatcttg 23799675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 187 - 270
Target Start/End: Original strand, 4696609 - 4696694
Alignment:
Q  187 ttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattggct-gaactgggtcaacaatcttg 270  Q
    ||||||| |||||| |||| |||||||||| ||||||||||||||||||||||| |||||||| | ||||||||||||||||||||    
T  4696609 ttgtaactctttcatcatagtggattggagggctgctctctcccccagattaggtcatattggatcgaactgggtcaacaatcttg 4696694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 175 - 270
Target Start/End: Original strand, 5702483 - 5702581
Alignment:
Q  175 tcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    ||||||||| ||||||||||||||||| ||||  ||||||||| | |||||||||||||| |||||| |||||||| | ||||||||||||||||||||    
T  5702483 tcttgtaactcttttgtaacactttcatcataggggattggagggatgctctctcccccatattaggtcatattggaccgaactgggtcaacaatcttg 5702581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 175 - 266
Target Start/End: Complemental strand, 6127318 - 6127224
Alignment:
Q  175 tcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaat 266  Q
    ||||||||| ||||||||||||||||| |||| ||||||||||||||||||||| ||||| |||||| |||||||| | |||||| |||||||||    
T  6127318 tcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctcttccccaaattaggtcatattggaccgaactgagtcaacaat 6127224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 206 - 267
Target Start/End: Original strand, 9765852 - 9765914
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatc 267  Q
    |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||    
T  9765852 tggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatc 9765914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 187 - 270
Target Start/End: Original strand, 19752407 - 19752492
Alignment:
Q  187 ttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    |||||||||||||| | || ||||||||||||||||||||||||| ||| |||| |||||||| | ||||| ||||||||||||||    
T  19752407 ttgtaacactttcatcttagtggattggagagctgctctctcccctagactaggtcatattggaccgaactaggtcaacaatcttg 19752492  T

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Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 31071035 - 31071095
Alignment:
Q  31 gttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    ||||||||||||||| | |||  ||||||||||||||||||||||||||| ||||||||||    
T  31071035 gttgagtgtctttgtagtgaggatctcttgggttgggaaaaacattgtaaacaccttgggt 31071095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 26288183 - 26288121
Alignment:
Q  29 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    ||||||| ||||||||| |||||  ||||||| ||||||||||||||||||| ||||||||||    
T  26288183 gggttgaatgtctttgtagagagaatctcttgagttgggaaaaacattgtaaacaccttgggt 26288121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 26301440 - 26301378
Alignment:
Q  29 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    ||||||| ||||||||| |||||  ||||||| ||||||||||||||||||| ||||||||||    
T  26301440 gggttgaatgtctttgtagagagaatctcttgagttgggaaaaacattgtaaacaccttgggt 26301378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 26313434 - 26313372
Alignment:
Q  29 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    ||||||| ||||||||| |||||  ||||||| ||||||||||||||||||| ||||||||||    
T  26313434 gggttgaatgtctttgtagagagaatctcttgagttgggaaaaacattgtaaacaccttgggt 26313372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 7412629 - 7412569
Alignment:
Q  29 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    ||||||||||||||||| |||||  ||||||||||||||  ||||||||||| ||||||||||    
T  7412629 gggttgagtgtctttgtagagaggatctcttgggttggg--aaacattgtaaacaccttgggt 7412569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 43079877 - 43079937
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  43079877 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 43079937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 43082248 - 43082308
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  43082248 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 43082308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 4696416 - 4696476
Alignment:
Q  29 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  4696416 gggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 4696476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 203 - 269
Target Start/End: Complemental strand, 6813750 - 6813683
Alignment:
Q  203 tattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 269  Q
    |||||||||||||||||||||||||||| ||  ||||  ||||||| | ||||||||| |||||||||    
T  6813750 tattggattggagagctgctctctcccctagtgtaggttatattggaccgaactgggttaacaatctt 6813683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 239
Target Start/End: Original strand, 18810982 - 18811015
Alignment:
Q  206 tggattggagagctgctctctcccccagattagg 239  Q
    |||||||||| |||||||||||||||||||||||    
T  18810982 tggattggagggctgctctctcccccagattagg 18811015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 23799384 - 23799441
Alignment:
Q  29 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttg 88  Q
    ||||||||||||||||| |||||  ||||||||||||||   |||||||||| |||||||    
T  23799384 gggttgagtgtctttgtagagaggatctcttgggttggg--gaacattgtaaacaccttg 23799441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 44721118 - 44721178
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    |||||||||||||||||||||||| |||| |||| ||  |||| | |||||||||||||||    
T  44721118 tggattggagagctgctctctcccgcagactaggtcaatttggaccgaactgggtcaacaa 44721178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 278; Significance: 1e-155; HSPs: 76)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 10 - 373
Target Start/End: Original strand, 22173019 - 22173382
Alignment:
Q  10 agcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtg 109  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |    
T  22173019 agcaaagtagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattagg 22173118  T
Q  110 agagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagag-tcttgtaaccttttgtaacactttcacatattgg 208  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||    
T  22173119 agagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattgg 22173218  T
Q  209 attggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttcttccttttaccgcttatcttgtt 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||| ||    
T  22173219 attggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttcttccttttaccgcttatcttatt 22173317  T
Q  309 tatgctttggaatctc-ttgtgtggttttgctatacactagcttagggctgttttgttgttgtttg 373  Q
    | |||||||| ||||| ||||||||||||||||||||||||  |||||||||||||||||||||||    
T  22173318 t-tgctttggtatctctttgtgtggttttgctatacactagtctagggctgttttgttgttgtttg 22173382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 27 - 371
Target Start/End: Complemental strand, 18656677 - 18656331
Alignment:
Q  27 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaatacca 126  Q
    ||||| || ||| ||||| ||||||||| |||| |||||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||    
T  18656677 atggggtgtgtgcctttgatgagagtgtttcttaggttgggaaaaacattgtaatcaccttgggattaagggtttatagtgtgagagtgggaaaatacca 18656578  T
Q  127 aagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagtcttgtaaccttttgtaacactttcacatattggattggagagctgctctct 226  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18656577 aagggtaga-tctagggtttgttcatgtgtaaagcttgaatgctagagtcttgtaaccttttgtaacactttctcatattggattggagagctgctctct 18656479  T
Q  227 cccccagattaggccatattggctgaactgggtcaacaatcttgtttggtg----ttttgttcttccttttaccgcttatcttgtttatgctttggaatc 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||    |||||||||| | ||||||| ||||||||||  |||||||  | |    
T  18656478 cccccagattaggccatattggctgaactgggtcaacaatcttgttcagtgttttttttgttctttcctttaccgtttatcttgtt--tgctttgttagc 18656381  T
Q  323 tc-ttgtgtggttttgctatacactagcttagggctgttttgttgttgtt 371  Q
    || |||||||||||| ||||||||||||||||||||||||||||||||||    
T  18656380 tctttgtgtggtttttctatacactagcttagggctgttttgttgttgtt 18656331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 91 - 371
Target Start/End: Complemental strand, 7167425 - 7167144
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagt--cttgtaacctttt 188  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||| ||||  ||  ||||||||| |||    
T  7167425 ttttagggttcatattgtgagagtggggaaataccaaagggtagaatctagggtttgttcttgtgtaa-gcttgaaggctattgtttcttgtaacccttt 7167327  T
Q  189 gtaacactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttctt 287  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  7167326 gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctt-ggtgttttgttctt 7167228  T
Q  288 ccttttaccgcttatcttgtttatgctttggaatctctt-gtgtggttttgctatacactagcttagggctgttttgttgttgtt 371  Q
    |||||    |||||||||||||||||||||  ||||||| ||||||||||||| ||||||||  |||||||||||||||||||||    
T  7167227 cctttctt-gcttatcttgtttatgctttgttatctctttgtgtggttttgctctacactagtctagggctgttttgttgttgtt 7167144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 40 - 280
Target Start/End: Original strand, 2676939 - 2677182
Alignment:
Q  40 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtagaat 137  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||| |    
T  2676939 ctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtaga-t 2677037  T
Q  138 ctagggtttgttcatgtgtaaagcttga-aagctagagtcttgtaac-cttttgtaacactttcacatattggattggagagctgctctctcccccagat 235  Q
    |||||||||  ||||||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  2677038 ctagggttttgtcatgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccagat 2677137  T
Q  236 taggccatattggctgaactgggtcaacaatcttgtttggtgttt 280  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||    
T  2677138 taggccacattggctgaactgggtcaacaatcttgcttggtgttt 2677182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 91 - 371
Target Start/End: Original strand, 28503780 - 28504052
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagt--cttgtaacctttt 188  Q
    |||||||||||||| |||||||||||| ||| |||||||||||||||||||||||| ||| ||||||||||||||| ||||||||  |||||||||||||    
T  28503780 ttttagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttattcttgtgtaaagcttgaaggctagagtttcttgtaacctttt 28503879  T
Q  189 gtaacactttcacatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttcttc 288  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||    
T  28503880 gtaacactttctcatattggattggagagctgctctcttccccagattaggccatattggctgaactgggtcaacaatctt-ctcggtgttttgttcttc 28503978  T
Q  289 cttttaccgcttatcttgtttatgctttggaatctc-ttgtgtggttttgctatacactagcttagggctgttttgttgttgtt 371  Q
    |||          ||||||||||||||||  ||||| ||||||||||||||||||||||||   ||||||||||||||||||||    
T  28503979 ctt----------tcttgtttatgctttgttatctctttgtgtggttttgctatacactagtcaagggctgttttgttgttgtt 28504052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 40 - 280
Target Start/End: Original strand, 2672783 - 2673026
Alignment:
Q  40 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtagaat 137  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| |||| |||||||||||||||  |||||||||||||||||||||| |    
T  2672783 ctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggatttaaggttcatagtgtgaggatgggaaaataccaaagggtaga-t 2672881  T
Q  138 ctagggtttgttcatgtgtaaagcttga-aagctagagtcttgtaac-cttttgtaacactttcacatattggattggagagctgctctctcccccagat 235  Q
    |||||||||  ||||||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  2672882 ctagggttttgtcatgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccagat 2672981  T
Q  236 taggccatattggctgaactgggtcaacaatcttgtttggtgttt 280  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||    
T  2672982 taggccacattggctgaactgggtcaacaatcttgcttggtgttt 2673026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 40 - 371
Target Start/End: Complemental strand, 24968340 - 24968007
Alignment:
Q  40 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtagaat 137  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||||||||||||||||||||  ||||||| |||||||||||||| |    
T  24968340 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaagtaccaaagggtaga-t 24968242  T
Q  138 ctagggtttgttcatgtgtaaagcttgaa-agctagagtcttgtaac-cttttgtaacactttcacatattggattggagagctgctctctcccccagat 235  Q
    || |||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||| | ||    
T  24968241 ctcgggtttgttcatgtgtaaagcttgaatagctagattcttgtaactcttttgtaacacattcacatattggattggagagctactctctccccaaaat 24968142  T
Q  236 taggccatattggctgaactgggtcaacaatcttgtttggtgttttgttc--ttccttttaccgcttatcttgtttatgctttggaatctctt-gtgtgg 332  Q
    || |||| ||||||||||||||||||||||||||| | |||| |||||||  || |||||| || ||||||||  ||||| |||  | ||||| ||||||    
T  24968141 taagccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcgttttcttttatcgtttatcttg--tatgc-ttgttagctcttagtgtgg 24968046  T
Q  333 ttttgctatacacta-gcttagggctgttttgttgttgtt 371  Q
    |||||||||||| || ||||| ||||||||||||||||||    
T  24968045 ttttgctatacattaggctta-ggctgttttgttgttgtt 24968007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 40 - 285
Target Start/End: Complemental strand, 8512450 - 8512202
Alignment:
Q  40 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtagaat 137  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||  ||||||||||||||||  ||||||| |||||||||||||  |    
T  8512450 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgaggttgggaaattaccaaagggtagg-t 8512352  T
Q  138 ctagggtttgttcatgtgtaaagcttga-aagctagagtcttgtaac-cttttgtaacactttcacatattggattggagagctgctctctcccccagat 235  Q
    |||||||||  || |||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  8512351 ctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccagat 8512252  T
Q  236 taggccatattggctgaactgggtcaacaatcttgtttggtgttttgttc 285  Q
    ||||||| ||||||||||||||||||||||||||| | ||||||||||||    
T  8512251 taggccacattggctgaactgggtcaacaatcttgctcggtgttttgttc 8512202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 40 - 285
Target Start/End: Complemental strand, 8517330 - 8517082
Alignment:
Q  40 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtagaat 137  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||  ||||||||||||||||  ||||||| |||||||||||||  |    
T  8517330 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgaggttgggaaattaccaaagggtagg-t 8517232  T
Q  138 ctagggtttgttcatgtgtaaagcttga-aagctagagtcttgtaac-cttttgtaacactttcacatattggattggagagctgctctctcccccagat 235  Q
    |||||||||  || |||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  8517231 ctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccagat 8517132  T
Q  236 taggccatattggctgaactgggtcaacaatcttgtttggtgttttgttc 285  Q
    ||||||| ||||||||||||||||||||||||||| | ||||||||||||    
T  8517131 taggccacattggctgaactgggtcaacaatcttgctcggtgttttgttc 8517082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 91 - 373
Target Start/End: Original strand, 2671502 - 2671785
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagt--cttgtaacctttt 188  Q
    |||||||||||||| |||||||||||| ||| ||  | ||||||||||||||| ||| || ||||||| ||||| || |||  ||  ||||||||| |||    
T  2671502 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttggtcttgtgtaa-gcttgcaatctattgtttcttgtaacccttt 2671600  T
Q  189 gtaacactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttctt 287  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  2671601 gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctt-ggtgttttgttctt 2671699  T
Q  288 ccttttaccgcttatcttgtttatgctttggaatctctt-gtgtggttttgctatacactagcttagggctg-ttttgttgttgtttg 373  Q
    |||||    ||||||||||||| |||||||  ||||||| |||||||||| || ||||||||  |||||||| |||||||||||||||    
T  2671700 cctttctt-gcttatcttgttt-tgctttgttatctctttgtgtggtttttctctacactagactagggctgtttttgttgttgtttg 2671785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 94 - 336
Target Start/End: Original strand, 8738982 - 8739224
Alignment:
Q  94 tagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagt--cttgtaaccttttgta 191  Q
    ||||||||||| |||||||||||| ||||||  | ||||||||||||||| |||||| ||||||| ||||||| ||||  ||  ||||||||| ||||||    
T  8738982 tagggttcatattgtgagagtggggaaatacatatgggtagaatctagggattgttcttgtgtaa-gcttgaaggctattgtttcttgtaaccctttgta 8739080  T
Q  192 acactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttcttcct 290  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||     
T  8739081 acactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-cttggtgttttgttcttcc- 8739178  T
Q  291 tttaccgcttatcttgtttatgctttggaatctc-ttgtgtggtttt 336  Q
    |||   ||||||||||||| |||||||| ||||| ||||||||||||    
T  8739179 tttcttgcttatcttgttt-tgctttggtatctctttgtgtggtttt 8739224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 94 - 336
Target Start/End: Original strand, 9091220 - 9091462
Alignment:
Q  94 tagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagt--cttgtaaccttttgta 191  Q
    ||||||||||| |||||||||||| ||||||  | ||||||||||||||| |||||| ||||||| ||||||| ||||  ||  ||||||||| ||||||    
T  9091220 tagggttcatattgtgagagtggggaaatacatatgggtagaatctagggattgttcttgtgtaa-gcttgaaggctattgtttcttgtaaccctttgta 9091318  T
Q  192 acactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttcttcct 290  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||     
T  9091319 acactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-cttggtgttttgttcttcc- 9091416  T
Q  291 tttaccgcttatcttgtttatgctttggaatctc-ttgtgtggtttt 336  Q
    |||   ||||||||||||| |||||||| ||||| ||||||||||||    
T  9091417 tttcttgcttatcttgttt-tgctttggtatctctttgtgtggtttt 9091462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 40 - 307
Target Start/End: Complemental strand, 32475717 - 32475446
Alignment:
Q  40 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaat-accaaagggtagaa 136  Q
    ||||| ||||||||  |||| |||||||||||  |||||||||||| |||||| ||  ||||||||||||||||  ||||||| | | ||||||||||      
T  32475717 ctttgatgagagtgaatcttaggttgggaaaacaacattgtaatcatcttgggattatgggttcatagtgtgaggttgggaaatttatcaaagggtagg- 32475619  T
Q  137 tctagggtttgttcatgtgtaaagcttga-aagctagagtcttgtaaccttttgtaacactttcacatattggattggagagctgctctctcccccagat 235  Q
    ||||||||||  || |||||||||||||| |||||||| |||||||||  ||||||| || |||||||||||||||||||||||||||||||||||||||    
T  32475618 tctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactctttgtaa-acattcacatattggattggagagctgctctctcccccagat 32475520  T
Q  236 taggccatattggctgaactgggtcaacaatcttgtttggtgttttgttc--ttccttttaccgcttatcttgt 307  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||  || |||||| || |||||||||    
T  32475519 taggccacattggctgaactgggtcaacaatcttgcttggtgttttgttcgttttcttttatcgtttatcttgt 32475446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 40 - 307
Target Start/End: Complemental strand, 32480575 - 32480304
Alignment:
Q  40 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaat-accaaagggtagaa 136  Q
    ||||| ||||||||  |||| |||||||||||  |||||||||||| |||||| ||  ||||||||||||||||  ||||||| | | ||||||||||      
T  32480575 ctttgatgagagtgaatcttaggttgggaaaacaacattgtaatcatcttgggattatgggttcatagtgtgaggttgggaaatttatcaaagggtagg- 32480477  T
Q  137 tctagggtttgttcatgtgtaaagcttga-aagctagagtcttgtaaccttttgtaacactttcacatattggattggagagctgctctctcccccagat 235  Q
    ||||||||||  || |||||||||||||| |||||||| |||||||||  ||||||| || |||||||||||||||||||||||||||||||||||||||    
T  32480476 tctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactctttgtaa-acattcacatattggattggagagctgctctctcccccagat 32480378  T
Q  236 taggccatattggctgaactgggtcaacaatcttgtttggtgttttgttc--ttccttttaccgcttatcttgt 307  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||  || |||||| || |||||||||    
T  32480377 taggccacattggctgaactgggtcaacaatcttggttggtgttttgttcgttttcttttatcgtttatcttgt 32480304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 91 - 290
Target Start/End: Original strand, 40372712 - 40372911
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagcta-gagtcttgtaaccttttg 189  Q
    |||||||||||||| | |||||||||| ||| ||  | ||||||||||||||| |||||| ||||| ||||||| ||||||    |||||||||| ||||    
T  40372712 ttttagggttcatattatgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgt-aagcttgcaagctatttttcttgtaaccctttg 40372810  T
Q  190 taacactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttcttc 288  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  40372811 taacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-cttggtgttttgttcttc 40372909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 91 - 371
Target Start/End: Complemental strand, 8477545 - 8477264
Alignment:
Q  91 ttttagggttcatagtgtgagagt-gggaaaataccaaagggtagaatctagggtttgttca-tgtgtaaagcttgaaagcta--gagtcttgtaacctt 186  Q
    |||||||||||||| ||||||||| ||| ||| ||||||||||||||||||||  ||||| | ||||| ||||||| ||||||  |  |||||||||| |    
T  8477545 ttttagggttcatattgtgagagtgggggaaacaccaaagggtagaatctaggtcttgtttattgtgt-aagcttgcaagctattgtttcttgtaaccct 8477447  T
Q  187 ttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgt-tttgtt 284  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||    
T  8477446 ttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-cttggtgtgtttgtt 8477348  T
Q  285 cttccttttaccgcttatcttgtttatgctttggaatctcttgtgtggttttgctatacactagcttagggct-gttttgttgttgtt 371  Q
    ||| | |||   ||||||||||||  ||||||| | | |||| |||||| ||| | ||||||||  ||||||| ||||||||||||||    
T  8477347 ctttc-tttcttgcttatcttgtt--tgctttgtattatctt-tgtggtgttgttctacactagtctagggctggttttgttgttgtt 8477264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 91 - 226
Target Start/End: Original strand, 28501613 - 28501750
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagag--tcttgtaacctttt 188  Q
    |||||||||||||| |||||||||||| ||| |||||||||||||||||||||||| ||| ||||||||||||||| |||||||  ||||||||||||||    
T  28501613 ttttagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttattcttgtgtaaagcttgaaggctagagtttcttgtaacctttt 28501712  T
Q  189 gtaacactttcacatattggattggagagctgctctct 226  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  28501713 gtaacactttctcatattggattggagagctgctctct 28501750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 91 - 292
Target Start/End: Original strand, 26928507 - 26928709
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagt--cttgtaacctttt 188  Q
    |||||||||||||| |||||||||||| ||| || || ||||||||||||||  |||||| ||||||| ||||| ||||||   |  ||||||||| |||    
T  26928507 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaa-gcttgcaagctattttttcttgtaacccttt 26928605  T
Q  189 gtaacactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgt-tttgttct 286  Q
    |||||||||||| |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||| ||||||||    
T  26928606 gtaacactttcatcatagtggattggagagttgctctctcccccagattaggtcatattggctgaactgggtcaacaatct--tttggtgtgtttgttct 26928703  T
Q  287 tccttt 292  Q
    | ||||    
T  26928704 ttcttt 26928709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 91 - 292
Target Start/End: Complemental strand, 32143501 - 32143299
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagcta-gagtcttgtaaccttttg 189  Q
    |||||||||||||| || ||||||||| ||| || || ||||||||||||||  |||||| ||||| ||||||| ||||||    |||||||||| ||||    
T  32143501 ttttagggttcatattgagagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgt-aagcttgcaagctatttttcttgtaaccctttg 32143403  T
Q  190 taacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttgtttggtgt-tttgttct 286  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||| | ||||| ||||||||||||  |||||||| ||||||||    
T  32143402 taacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactaggtcaacaatct--tttggtgtgtttgttct 32143305  T
Q  287 tccttt 292  Q
    ||||||    
T  32143304 tccttt 32143299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 91 - 292
Target Start/End: Complemental strand, 1306128 - 1305927
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagt-cttgtaaccttttg 189  Q
    |||||||||||||| || ||||||||| ||| || || |||||||| ||| |  |||||| ||||||| ||||| || |||   | ||||||||| ||||    
T  1306128 ttttagggttcatattgagagagtggggaaacacaaatgggtagaaactatgacttgttcttgtgtaa-gcttgcaaactatttttcttgtaaccctttg 1306030  T
Q  190 taacactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgt-tttgttctt 287  Q
    ||||||||||| | || ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||  |||||||| |||||||||    
T  1306029 taacactttcatcgtagtggattggagagctgctatctcccctagattaggccatattggctgaactgggtcaacaatct--tttggtgtgtttgttctt 1305932  T
Q  288 ccttt 292  Q
    |||||    
T  1305931 ccttt 1305927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 8738846 - 8738926
Alignment:
Q  11 gcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  8738846 gcaaaggagggaaccaatgggttgagtgtctttgtagagagtatctcttgggttgggaaaaacattgtaatcaccttgggt 8738926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 2671370 - 2671449
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2671370 caaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 2671449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 40372580 - 40372659
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  40372580 caaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 40372659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 7167558 - 7167478
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttggga-aaaacattgtaatcaccttgggt 91  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  7167558 caaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaaacattgtaatcaccttgggt 7167478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 8477674 - 8477598
Alignment:
Q  15 aggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  8477674 aggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 8477598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 9091085 - 9091164
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  9091085 caaaggagggaaccaaagggttgagtgtctttgtagagagtatctcttgggttgggaaaaacattgtaatcaccttgggt 9091164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 91 - 269
Target Start/End: Complemental strand, 27453138 - 27452958
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagcta-gagtcttgtaaccttttg 189  Q
    |||||||||||||| || ||||||||| ||| || || ||||||||  ||||  |||||| ||||| ||||||| ||||||    |||||||||| ||||    
T  27453138 ttttagggttcatattgagagagtggggaaacacaaatgggtagaaaataggaattgttcttgtgt-aagcttgcaagctatttttcttgtaaccctttg 27453040  T
Q  190 taacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 269  Q
    ||||||||||| |||| |||||||||||||||||||||||||| ||||||| |||||||| | ||||||| |||||||||||    
T  27453039 taacactttcatcatagtggattggagagctgctctctcccccggattaggtcatattggaccgaactggatcaacaatctt 27452958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 28501480 - 28501560
Alignment:
Q  12 caaaggagggaaccaat-gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    ||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28501480 caaaggagggaaccaaaagggatgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 28501560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 28503647 - 28503727
Alignment:
Q  12 caaaggagggaaccaat-gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  28503647 caaaggagggaaccaaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgggt 28503727  T

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Target: chr3; HSP #30
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 175 - 269
Target Start/End: Original strand, 8370477 - 8370573
Alignment:
Q  175 tcttgtaaccttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 269  Q
    |||||||||  ||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  8370477 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 8370573  T

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Target: chr3; HSP #31
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 175 - 269
Target Start/End: Original strand, 27974943 - 27975039
Alignment:
Q  175 tcttgtaaccttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 269  Q
    |||||||||  ||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  27974943 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 27975039  T

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Target: chr3; HSP #32
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 175 - 270
Target Start/End: Original strand, 18552873 - 18552971
Alignment:
Q  175 tcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    ||||||||| ||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||| |||||||| | ||||||||||||||||||||    
T  18552873 tcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttg 18552971  T

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Target: chr3; HSP #33
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 158 - 269
Target Start/End: Complemental strand, 16264463 - 16264350
Alignment:
Q  158 aagcttgaaagctagagtcttgtaaccttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaact 255  Q
    ||||||| ||||||   |||||||||  ||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||| | |||||    
T  16264463 aagcttgcaagctattttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaact 16264364  T
Q  256 gggtcaacaatctt 269  Q
     |||||||||||||    
T  16264363 aggtcaacaatctt 16264350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 175 - 270
Target Start/End: Complemental strand, 21711319 - 21711222
Alignment:
Q  175 tcttgtaaccttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    |||||||||  ||||||||||||||| |||| |||||| ||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||    
T  21711319 tcttgtaactctttgtaacactttcatcatagtggatttgagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttg 21711222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 187 - 269
Target Start/End: Original strand, 27986449 - 27986533
Alignment:
Q  187 ttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 269  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  27986449 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 27986533  T

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Target: chr3; HSP #36
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 175 - 268
Target Start/End: Complemental strand, 36029190 - 36029094
Alignment:
Q  175 tcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatct 268  Q
    ||||||||| ||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||| |||||||| | ||||||||||||||||||    
T  36029190 tcttgtaactcttttgtaacactttcatcatagtggattggagagctgctttctcccccagattaggtcatattggacagaactgggtcaacaatct 36029094  T

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Target: chr3; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 175 - 266
Target Start/End: Original strand, 1736295 - 1736389
Alignment:
Q  175 tcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaat 266  Q
    ||||||||| ||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||| |||||||| | ||||||||||||||||    
T  1736295 tcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaat 1736389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 175 - 269
Target Start/End: Original strand, 30709780 - 30709877
Alignment:
Q  175 tcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 269  Q
    ||||||||| ||||||||||| ||||| |||| |||||||||| ||||||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  30709780 tcttgtaactcttttgtaacaatttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 30709877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 144 - 270
Target Start/End: Original strand, 40592742 - 40592870
Alignment:
Q  144 tttgttcatgtgtaaagcttgaaagctagagtcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggcc 241  Q
    ||||||| ||||||| ||||| ||||||   ||||||||| ||||||||||||||||| |||| | |||||||||||| ||||||||| ||||||||| |    
T  40592742 tttgttcttgtgtaa-gcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtcgattggagagcttctctctcccacagattaggtc 40592840  T
Q  242 atattgg-ctgaactgggtcaacaatcttg 270  Q
    ||||||| | ||||||||||||||||||||    
T  40592841 atattggaccgaactgggtcaacaatcttg 40592870  T

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Target: chr3; HSP #40
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 187 - 269
Target Start/End: Original strand, 33386669 - 33386753
Alignment:
Q  187 ttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 269  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||| | ||||||| |||||||||||    
T  33386669 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactggatcaacaatctt 33386753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 221 - 280
Target Start/End: Complemental strand, 10207983 - 10207924
Alignment:
Q  221 ctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttt 280  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  10207983 ctctctcccccagattaggccacattggctgaactgggtcaacaatcttgcttggtgttt 10207924  T

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Target: chr3; HSP #42
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 175 - 270
Target Start/End: Original strand, 3715992 - 3716090
Alignment:
Q  175 tcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    ||||||||| ||||||||||||||||| |||| | |||||||||||||||||||| || |||||||| |||||||| | ||||||||||||||||||||    
T  3715992 tcttgtaactcttttgtaacactttcatcatagtagattggagagctgctctctctcctagattaggtcatattggaccgaactgggtcaacaatcttg 3716090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 175 - 270
Target Start/End: Complemental strand, 48438311 - 48438213
Alignment:
Q  175 tcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    ||||||||| ||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||| |||||||| | ||||| |||||| |||||||    
T  48438311 tcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactaggtcaataatcttg 48438213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 175 - 270
Target Start/End: Original strand, 6794704 - 6794801
Alignment:
Q  175 tcttgtaaccttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    |||||||||  ||||||||||||||| |||| ||||||||||||||||||||||||||| |||||| |||||||| |  ||| |||||||||||||||    
T  6794704 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccatattaggtcatattggacctaaccgggtcaacaatcttg 6794801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 175 - 270
Target Start/End: Complemental strand, 26299085 - 26298987
Alignment:
Q  175 tcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattg-gctgaactgggtcaacaatcttg 270  Q
    ||||||||| ||||||||||||||||| |||| | |||||||| ||||||||||||||||||||| | |||||||  | ||||||||||||||||||||    
T  26299085 tcttgtaactcttttgtaacactttcatcatagtagattggagggctgctctctcccccagattatgtcatattgaaccgaactgggtcaacaatcttg 26298987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 175 - 269
Target Start/End: Complemental strand, 25795878 - 25795781
Alignment:
Q  175 tcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 269  Q
    ||||||||| |||| |||||||||||| | || | |||||||||||||||||||||||||||||||| |||||||| | ||||| |||||||||||||    
T  25795878 tcttgtaactctttcgtaacactttcatcttagtagattggagagctgctctctcccccagattaggtcatattggaccgaactaggtcaacaatctt 25795781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 270
Target Start/End: Original strand, 47923896 - 47923994
Alignment:
Q  175 tcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattggct-gaactgggtcaacaatcttg 270  Q
    ||||||||| |||||||| |||||||| |||| | ||||| || |||||||||||||| |||||||| |||||||| | ||||||||||||||||||||    
T  47923896 tcttgtaactcttttgtagcactttcatcatagtagattgaagggctgctctctcccctagattaggtcatattggatcgaactgggtcaacaatcttg 47923994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 206 - 270
Target Start/End: Original strand, 1417513 - 1417578
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    |||||||||| | ||||||||||||||||||||| |||||||| | ||||||||||||||||||||    
T  1417513 tggattggagggatgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttg 1417578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 187 - 270
Target Start/End: Complemental strand, 37466375 - 37466290
Alignment:
Q  187 ttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    |||||||||||||| | || |||||||||| ||| ||||||||||||||||||| |||||||| | |||||| |||||||||||||    
T  37466375 ttgtaacactttcatcttagtggattggagggctactctctcccccagattaggtcatattggaccgaactgtgtcaacaatcttg 37466290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 1306239 - 1306179
Alignment:
Q  31 gttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    ||||||||||||||| | |||  ||||||||||||||||||||||||||| ||||||||||    
T  1306239 gttgagtgtctttgtagtgaggatctcttgggttgggaaaaacattgtaaacaccttgggt 1306179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 187 - 269
Target Start/End: Original strand, 39039995 - 39040079
Alignment:
Q  187 ttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 269  Q
    |||||||||||||| |||| |||||||||||| || ||||| |||||||||||| |||||||| | ||||| |||||||||||||    
T  39039995 ttgtaacactttcatcatagtggattggagagttgttctcttccccagattaggtcatattggaccgaactaggtcaacaatctt 39040079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 175 - 270
Target Start/End: Complemental strand, 40844748 - 40844651
Alignment:
Q  175 tcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    ||||||||| ||||||||||||||||| |||| |||||| ||| |||||||||| |||||||||||| |||||||| | ||||||  ||||||||||||    
T  40844748 tcttgtaactcttttgtaacactttcatcatagtggatttgagggctgctctct-ccccagattaggtcatattggaccgaactgaatcaacaatcttg 40844651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 270
Target Start/End: Original strand, 3328359 - 3328444
Alignment:
Q  187 ttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    |||||||||||||| | || ||||||| || |||||||||||| | |||||||| ||||||||  |||||||||||||||||||||    
T  3328359 ttgtaacactttcatcttagtggattgaagggctgctctctcctctagattaggtcatattggaatgaactgggtcaacaatcttg 3328444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 203 - 269
Target Start/End: Original strand, 4386947 - 4387014
Alignment:
Q  203 tattggattggagagctgctctctcccccagattaggccatattg-gctgaactgggtcaacaatctt 269  Q
    |||||||||||||||||||||||||||||||| |||| |||| ||  || |||||||| |||||||||    
T  4386947 tattggattggagagctgctctctcccccagagtaggtcatactgaactaaactgggtaaacaatctt 4387014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 270
Target Start/End: Original strand, 24695154 - 24695252
Alignment:
Q  175 tcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    ||||||||| ||||||||||||||||| ||||  ||||| ||| | |||||||||||  |||||||| |||||||| | ||||| ||||||||||||||    
T  24695154 tcttgtaactcttttgtaacactttcatcatagcggattagagggttgctctctcccgtagattaggtcatattggaccgaactaggtcaacaatcttg 24695252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 4386774 - 4386831
Alignment:
Q  29 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttg 88  Q
    ||||||||||||||||| | |||  ||||||||||||||  |||||||||||||||||||    
T  4386774 gggttgagtgtctttgtagtgaggttctcttgggttggg--aaacattgtaatcaccttg 4386831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 27986236 - 27986313
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  27986236 caaaggagggaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 27986313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 38210569 - 38210629
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    ||||||||||||||||||||||||||| | |||| || ||||| | |||||||||||||||    
T  38210569 tggattggagagctgctctctcccccatactaggtcagattggaccgaactgggtcaacaa 38210629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 50494198 - 50494258
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  50494198 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 50494258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 265
Target Start/End: Complemental strand, 53894119 - 53894055
Alignment:
Q  202 atattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    |||||||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  53894119 atattggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 53894055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 23392166 - 23392106
Alignment:
Q  29 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  23392166 gggttgagtgtctttgtagtgaggttctcttgggttggg--aaacattgtaaacaccttgggt 23392106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 24694963 - 24695023
Alignment:
Q  29 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  24694963 gggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 24695023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 26928396 - 26928456
Alignment:
Q  29 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  26928396 gggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 26928456  T

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Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 36029382 - 36029322
Alignment:
Q  29 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  36029382 gggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 36029322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 40592579 - 40592639
Alignment:
Q  29 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  40592579 gggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 40592639  T

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Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 248
Target Start/End: Original strand, 3323693 - 3323755
Alignment:
Q  187 ttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg 248  Q
    |||||||||||||| | || |||||||||| |||| |||||| ||||||||||| ||||||||    
T  3323693 ttgtaacactttcatcttagtggattggagggctgttctctctcccagattaggtcatattgg 3323755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 292
Target Start/End: Complemental strand, 1309878 - 1309832
Alignment:
Q  245 ttggctgaactgggtcaacaatcttgtttggtgt-tttgttcttccttt 292  Q
    ||||||||||||||||||||||||  |||||||| ||||||||||||||    
T  1309878 ttggctgaactgggtcaacaatct--tttggtgtgtttgttcttccttt 1309832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 458483 - 458543
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  458483 tggattggagggctgctctctcccccagactaggtcaggttggaccgaactgggtcaacaa 458543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 6063504 - 6063444
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||| ||||    
T  6063504 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtccacaa 6063444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 10621588 - 10621528
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    |||||||||| |||||||||||||||||| |||  || ||||| | |||||||||||||||    
T  10621588 tggattggagggctgctctctcccccagactagctcagattggaccgaactgggtcaacaa 10621528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 21711511 - 21711454
Alignment:
Q  29 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttg 88  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| |||||||    
T  21711511 gggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttg 21711454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 23410586 - 23410529
Alignment:
Q  29 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttg 88  Q
    ||||||||||||||||| | |||  |||||||||||||  |||||||||||| |||||||    
T  23410586 gggttgagtgtctttgtagtgaggttctcttgggttgg--aaaacattgtaaacaccttg 23410529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 32143629 - 32143552
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||    ||||||||||||||||| | ||   |||||||||||||  |||||||||||| ||||||||||    
T  32143629 caaaggagggaactctagggttgagtgtctttgtagtgatgatctcttgggttgg--aaaacattgtaaacaccttgggt 32143552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 269
Target Start/End: Complemental strand, 39153405 - 39153357
Alignment:
Q  222 tctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 269  Q
    |||||||||||||||||| ||  |||| |||||||||||||||||||||    
T  39153405 tctctcccccagattaggtcaagttggactgaactgggtcaacaatctt 39153357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 273
Target Start/End: Original strand, 44331669 - 44331721
Alignment:
Q  222 tctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttgttt 273  Q
    |||||||||||||||||| ||  |||| | |||||||||||||||||||||||    
T  44331669 tctctcccccagattaggtcaagttggaccgaactgggtcaacaatcttgttt 44331721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 47923704 - 47923761
Alignment:
Q  32 ttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  47923704 ttgagtgtctttgtagtgagaatctcttgggttggg--aaacattgtaaacaccttgggt 47923761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 276; Significance: 1e-154; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 10 - 371
Target Start/End: Complemental strand, 41398497 - 41398140
Alignment:
Q  10 agcaaaggagggaaccaa-tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgt 108  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41398497 agcaaaggagggaaccaaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgt 41398398  T
Q  109 gagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagtcttgtaaccttttgtaacactttcacatattgg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  41398397 gagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtcttgtaaccttttgtaacactttctcatattgg 41398298  T
Q  209 attggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttcttccttttaccgcttatcttgtt 308  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  | ||||||||||||||||||      |||||||||||    
T  41398297 attggagagctgctctctcccccagattaggccatattggctgacctgggtcaacaatctt-ctcggtgttttgttcttcctt------cttatcttgtt 41398205  T
Q  309 tatgctttggaatctc-ttgtgtgg--ttttgctatacactagcttagggctgttttgttgttgtt 371  Q
    |||||||||| ||||| ||||||||  |||||||||||||||| ||||||||||||||||||||||    
T  41398204 tatgctttggtatctctttgtgtggttttttgctatacactag-ttagggctgttttgttgttgtt 41398140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 10 - 373
Target Start/End: Complemental strand, 41390842 - 41390483
Alignment:
Q  10 agcaaaggagggaaccaa-tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgt 108  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41390842 agcaaaggagggaaccaaatggattgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgt 41390743  T
Q  109 gagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagtcttgtaaccttttgtaacactttcacatattgg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  41390742 gagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtcttgtaaccttttgtaacactttctcatattgg 41390643  T
Q  209 attggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttcttccttttaccgcttatcttgtt 308  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  | | ||||||||||||||||      |||||||||||    
T  41390642 attggagagctgctctctcccccagattaggccatattggctgatctgggtcaacaatctt-ctcgatgttttgttcttcctt------cttatcttgtt 41390550  T
Q  309 tatgctttggaatctc-ttgtgtgg--ttttgctatacactagcttagggctgttttgttgttgtttg 373  Q
    |||||||||  ||||| ||||||||  |||||||||||||||| ||||||||||||||||||||||||    
T  41390549 tatgctttgatatctctttgtgtggttttttgctatacactag-ttagggctgttttgttgttgtttg 41390483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 27 - 373
Target Start/End: Original strand, 25444931 - 25445277
Alignment:
Q  27 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaatacca 126  Q
    ||||| || ||| ||||| |||||| || |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  25444931 atggggtgtgtgcctttgatgagagagtttcttaggttgggaaaaacattgtaatcaccttgggatttagggttcatagtgtgagagtgggaaaatacca 25445030  T
Q  127 aagggtagaatctagggtttgttcatgtgtaaagcttga-aagctagagtcttgtaaccttttgtaacactttcacatattggattggagagctgctctc 225  Q
    ||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  25445031 aagggtagc-tctagggtttgttcatgtgtaaagcttgataagctagagtcttgtaaccttttgtaacactttctcatattggattggagagctgctctc 25445129  T
Q  226 tcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttc-ttccttttaccgcttatcttgtttatgctttggaatctc 324  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||| |||||||||||| || |||  | |||    
T  25445130 tcccccagattaggccatattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttacgc-ttgttagctc 25445228  T
Q  325 -ttgtgtggttttgctatacactagcttagggctgttttgttgttgtttg 373  Q
     |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  25445229 tttgtgtggttttgctatacactagcttagggctg-tttgttgttgtttg 25445277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 27 - 373
Target Start/End: Complemental strand, 39445742 - 39445397
Alignment:
Q  27 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaatacca 126  Q
    ||||| || ||| ||||| |||||| || |||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  39445742 atggggtgtgtgcctttgatgagagagtttcttaggttgggaaaaacattgtaatcaccttgggattttgggttcatagtgtgagagtgggaaaatacca 39445643  T
Q  127 aagggtagaatctagggtttgttcatgtgtaaagcttga-aagctagagtcttgtaaccttttgtaacactttcacatattggattggagagctgctctc 225  Q
    ||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  39445642 aagggtagt-tctagggtttgttcatgtgtaaagcttgataagctagagtcttgtaaccttttgtaacactt-cacatattggattggagagctgctctc 39445545  T
Q  226 tcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttc-ttccttttaccgcttatcttgtttatgctttggaatctc 324  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||| ||||||||||||||| |||  | |||    
T  39445544 tcccccagattaggccatattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgc-ttgttagctc 39445446  T
Q  325 -ttgtgtggttttgctatacactagcttagggctgttttgttgttgtttg 373  Q
     |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  39445445 tttgtgtggttttgctatacactagcttagggctg-tttgttgttgtttg 39445397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 27 - 373
Target Start/End: Original strand, 44023716 - 44024060
Alignment:
Q  27 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaatacca 126  Q
    ||||| || ||| ||||| |||||| || |||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  44023716 atggggtgtgtgcctttgatgagagagtttcttaggttgggaaaaacattgtaatcaccttgggattttgggttcatagtgtgagagtgggaaaatacca 44023815  T
Q  127 aagggtagaatctagggtttgttcatgtgtaaagcttga-aagctagagtcttgtaaccttttgtaacactttcacatattggattggagagctgctctc 225  Q
    ||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  44023816 aagggtagt-tctagggtttgttcatgtgtaaagcttgacaagctagagtcttgtaaccttttgtaacactt-cacatattggattggagagctgctctc 44023913  T
Q  226 tcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttcttccttttaccgcttatcttgtttatgctttggaatctc- 324  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| | ||||||  ||||||||||||||| |||  | |||     
T  44023914 tcccccagattaggccatattggctgaactgggtcaacaatcttgctcggtgttttgttctttcctttaccatttatcttgtttatgc-ttgttagctct 44024012  T
Q  325 ttgtgtggttttgctatacactagcttagggctgttttgttgttgtttg 373  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  44024013 ttgtgtggttttgctatacactagcttagggctg-tttgttgttgtttg 44024060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 27 - 370
Target Start/End: Original strand, 1054854 - 1055196
Alignment:
Q  27 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaatacca 126  Q
    ||||| || ||| ||||| |||||| || |||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  1054854 atggggtgtgtgcctttgatgagagagtttcttaggttgggaaaaacattgtaatcaccttgggattttgggttcatagtgtgagagtgggaaaatacca 1054953  T
Q  127 aagggtagaatctagggtttgttcatgtgtaaagcttga-aagctagagtcttgtaaccttttgtaacactttcacatattggattggagagctgctctc 225  Q
    ||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  1054954 aagggtagt-tctagggtttgttcatgtgtaaagcttgataagctagagtcttgtaaccttttgtaacactt-cacatattggattggagagttgctctc 1055051  T
Q  226 tcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttc-ttccttttaccgcttatcttgtttatgctttggaatctc 324  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||| ||||||||||||||| |||  | |||    
T  1055052 tcccccagattaggccatattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgc-ttgttagctc 1055150  T
Q  325 -ttgtgtggttttgctatacactagcttagggctgttttgttgttgt 370  Q
     |||||||||||||||||||||||||||||||||| |||||||||||    
T  1055151 tttgtgtggttttgctatacactagcttagggctg-tttgttgttgt 1055196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 40 - 287
Target Start/End: Original strand, 43988314 - 43988566
Alignment:
Q  40 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtagaat 137  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||  ||||||||||||||||  ||||||||| |||||||||||| |    
T  43988314 ctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgaggatgggaaaatgccaaagggtaga-t 43988412  T
Q  138 ctagggtttgtt--catgtgtaaagcttga-aagctagagtcttgtaac-cttttgtaacactttcacatattggattggagagctgctctctcccccag 233  Q
    ||||||||| ||  | |||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  43988413 ctagggttttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccag 43988512  T
Q  234 attaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttctt 287  Q
    ||||||||| |||||||||||||||| |||||||||| ||||||||||||||||    
T  43988513 attaggccacattggctgaactgggtaaacaatcttgcttggtgttttgttctt 43988566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 91 - 371
Target Start/End: Original strand, 24787280 - 24787559
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagt--cttgtaacctttt 188  Q
    |||||||||||||| ||||||||| || ||| |||||||||||||||||||| ||||||| ||||||| ||||||| ||||  ||  ||||||||| |||    
T  24787280 ttttagggttcatattgtgagagttgggaaacaccaaagggtagaatctaggatttgttcttgtgtaatgcttgaaggctattgtttcttgtaacccttt 24787379  T
Q  189 gtaacactttcacatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttcttc 288  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  24787380 gtaacactttctcatattggattggagagctgctctcccccccagattaggccatattggctgaactgggtcaacaatctt-cttggtgttttgttcttc 24787478  T
Q  289 cttttaccgcttatcttgtttatgctttggaatctc-ttgtgtggttttgctatacactagcttagggctgttttgttgttgtt 371  Q
    |||||   ||||||||||||  |||||||  ||||| ||||||||||||||| ||||  ||  |||||||||||| ||||||||    
T  24787479 cttttcttgcttatcttgtt--tgctttgttatctctttgtgtggttttgctctacataagtctagggctgtttt-ttgttgtt 24787559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 91 - 373
Target Start/End: Original strand, 24202686 - 24202964
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagcta-gagtcttgtaaccttttg 189  Q
    |||||||||||||| |||||||||||| ||| || || ||||||||||||||  |||||| ||||| ||||||| ||||||    |||||||||| ||||    
T  24202686 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgt-aagcttgcaagctatttttcttgtaaccctttg 24202784  T
Q  190 taacactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgt-tttgttctt 287  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  24202785 taacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-tttggtgtgtttgttctt 24202883  T
Q  288 ccttttaccgcttatcttgtttatgctttggaatctcttgtgtggttttgctatacactagcttagggctgttttgttgttgtttg 373  Q
    || |||   ||||||||||||  ||||||| | |||||  |||||| ||||| |||||||| ||||||||||||||||||||||||    
T  24202884 cc-tttcttgcttatcttgtt--tgctttgtattctct--tgtggtgttgctctacactagtttagggctgttttgttgttgtttg 24202964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 27 - 165
Target Start/End: Original strand, 25439738 - 25439875
Alignment:
Q  27 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaatacca 126  Q
    ||||| || ||| ||||| |||||| || |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  25439738 atggggtgtgtgcctttgatgagagagtttcttaggttgggaaaaacattgtaatcaccttgggatttagggttcatagtgtgagagtgggaaaatacca 25439837  T
Q  127 aagggtagaatctagggtttgttcatgtgtaaagcttga 165  Q
    ||||||||  |||||||||||||||||||||||||||||    
T  25439838 aagggtag-ctctagggtttgttcatgtgtaaagcttga 25439875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 91 - 306
Target Start/End: Original strand, 19358760 - 19358975
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagcta-gagtcttgtaaccttttg 189  Q
    |||||||||||||| || ||||||||| ||| || || ||||||||||||||  |||||| ||||| ||||||| ||||||    |||||||||| ||||    
T  19358760 ttttagggttcatattgagagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgt-aagcttgcaagctatttttcttgtaaccctttg 19358858  T
Q  190 taacactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgt-tttgttctt 287  Q
    ||||||||||| |||| ||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||  |||| ||| |||||||||    
T  19358859 taacactttcatcatagtggattggagagctgctctctcccccatattaggtcatattgactgaactgggtcaacaatct--tttgatgtgtttgttctt 19358956  T
Q  288 ccttttaccgcttatcttg 306  Q
    ||||||   ||||||||||    
T  19358957 ccttttcttgcttatcttg 19358975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 91 - 306
Target Start/End: Original strand, 19361349 - 19361564
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagt-cttgtaaccttttg 189  Q
    |||||||||||||| || ||||||||| ||| || || ||||||||||||||  |||||| ||||||| ||||| || |||   | ||||||||| ||||    
T  19361349 ttttagggttcatattgagagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaa-gcttgcaaactatttttcttgtaaccctttg 19361447  T
Q  190 taacactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgt-tttgttctt 287  Q
    ||||||||||| |||| ||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||  |||||||| |||||||||    
T  19361448 taacactttcatcatagtggattggagagctgctctctcccccatattaggtcatattgactgaactgggtcaacaatct--tttggtgtgtttgttctt 19361545  T
Q  288 ccttttaccgcttatcttg 306  Q
    ||||||   ||||||||||    
T  19361546 ccttttcttgcttatcttg 19361564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 91 - 306
Target Start/End: Original strand, 19379989 - 19380204
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagt-cttgtaaccttttg 189  Q
    |||||||||||||| || ||||||||| ||| || || ||||||||||||||  |||||| ||||||| ||||| || |||   | ||||||||| ||||    
T  19379989 ttttagggttcatattgagagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaa-gcttgcaaactatttttcttgtaaccctttg 19380087  T
Q  190 taacactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgt-tttgttctt 287  Q
    ||||||||||| |||| ||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||  |||||||| |||||||||    
T  19380088 taacactttcatcatagtggattggagagctgctctctcccccatattaggtcatattgactgaactgggtcaacaatct--tttggtgtgtttgttctt 19380185  T
Q  288 ccttttaccgcttatcttg 306  Q
    ||||||   ||||||||||    
T  19380186 ccttttcttgcttatcttg 19380204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 24787148 - 24787226
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 90  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  24787148 caaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattataatcaccttggg 24787226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 145 - 269
Target Start/End: Original strand, 26644869 - 26644994
Alignment:
Q  145 ttgttcatgtgtaaagcttgaaagctagagtcttgtaaccttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccat 243  Q
    |||||| ||||||| ||||| ||||||   |||||||||  ||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||    
T  26644869 ttgttcttgtgtaa-gcttgcaagctattttcttgtaactctttgtaacactttcatcataatggattggagagctgctctctcccccagattaggtcat 26644967  T
Q  244 attgg-ctgaactgggtcaacaatctt 269  Q
    ||||| | |||||||||||||||||||    
T  26644968 attggaccgaactgggtcaacaatctt 26644994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 184 - 270
Target Start/End: Original strand, 47703946 - 47704034
Alignment:
Q  184 cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||    
T  47703946 cttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttg 47704034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 24202556 - 24202635
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24202556 caaaggagggaactttagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 24202635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 175 - 269
Target Start/End: Complemental strand, 19073025 - 19072928
Alignment:
Q  175 tcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 269  Q
    ||||||||| ||||||||||||||||| | || |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  19073025 tcttgtaactcttttgtaacactttcatcttagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 19072928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 175 - 269
Target Start/End: Complemental strand, 19120915 - 19120818
Alignment:
Q  175 tcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 269  Q
    ||||||||| ||||||||||||||||| | || |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  19120915 tcttgtaactcttttgtaacactttcatcttagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 19120818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 93 - 269
Target Start/End: Complemental strand, 3281885 - 3281708
Alignment:
Q  93 ttagggttcat-agtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagtcttgtaaccttttgta 191  Q
    ||||||||||| | || ||||||||||||  || || ||||||||  ||||  |||||| ||||||| ||||| ||||||   |||||||||  ||||||    
T  3281885 ttagggttcatcattgagagagtgggaaac-acaaatgggtagaaattaggtcttgttcttgtgtaa-gcttgcaagctattttcttgtaactctttgta 3281788  T
Q  192 acactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 269  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||| ||||||    
T  3281787 acactttcatcatcgtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaataatctt 3281708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 175 - 270
Target Start/End: Original strand, 16124516 - 16124614
Alignment:
Q  175 tcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    ||||||||| ||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||| |||||||| | |||||| |||||||||||||    
T  16124516 tcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgagtcaacaatcttg 16124614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 175 - 270
Target Start/End: Original strand, 27104372 - 27104470
Alignment:
Q  175 tcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    ||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||  ||||||| | |||||| |||||||||||||    
T  27104372 tcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggttatattggaccgaactgtgtcaacaatcttg 27104470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 184 - 270
Target Start/End: Complemental strand, 9476348 - 9476260
Alignment:
Q  184 cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    ||||||||| ||||||| |||| ||||||||||||||||||||||||| |||||||| |||||||| | ||||||||||||||||||||    
T  9476348 cttttgtaatactttcatcatagtggattggagagctgctctctcccctagattaggtcatattggaccgaactgggtcaacaatcttg 9476260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 184 - 270
Target Start/End: Complemental strand, 13598485 - 13598397
Alignment:
Q  184 cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    ||||||||||||||||| |||| ||||||| || ||||||||||||||||||||||| |||||||| | ||||||||||||||||||||    
T  13598485 cttttgtaacactttcatcatagtggattgaagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttg 13598397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 184 - 270
Target Start/End: Complemental strand, 29651898 - 29651810
Alignment:
Q  184 cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||| |||||||| | |||||||||||| |||||||    
T  29651898 cttttgtaacactttcatcatagtggattggagtgctgctctctcccccagattaggtcatattggaccgaactgggtcaaaaatcttg 29651810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 177 - 269
Target Start/End: Complemental strand, 37069864 - 37069770
Alignment:
Q  177 ttgtaaccttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 269  Q
    |||||||  ||||||||||||||| |||| ||||| |||||| ||||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  37069864 ttgtaactctttgtaacactttcatcatagtggatcggagagatgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 37069770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 184 - 270
Target Start/End: Complemental strand, 775759 - 775671
Alignment:
Q  184 cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    ||||||||||||||||| | || |||||||||||||| ||||||||||||||||||| |||||||| | ||| ||||||||||||||||    
T  775759 cttttgtaacactttcatcttagtggattggagagctactctctcccccagattaggtcatattggaccgaattgggtcaacaatcttg 775671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 145 - 269
Target Start/End: Original strand, 21536541 - 21536666
Alignment:
Q  145 ttgttcatgtgtaaagcttgaaagctagagtcttgtaaccttttgtaacactttcac-atattggattggagagctgctctctcccccagattaggcca- 242  Q
    |||||| ||||||| ||||| ||||||   |||||||||  |||||||||||||||  ||| |||||||||||||||||||||||||||||||||| ||     
T  21536541 ttgttcttgtgtaa-gcttgcaagctattttcttgtaactctttgtaacactttcattatagtggattggagagctgctctctcccccagattaggtcat 21536639  T
Q  243 tattggctgaactgggtcaacaatctt 269  Q
    | ||  | |||||||||||||||||||    
T  21536640 tttttaccgaactgggtcaacaatctt 21536666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 187 - 270
Target Start/End: Original strand, 47098837 - 47098922
Alignment:
Q  187 ttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    |||||||||||||| | || |||||||||| |||||||||||||||||||| || |||||||| | ||||||||||||||||||||    
T  47098837 ttgtaacactttcatcttagtggattggagggctgctctctcccccagattcggtcatattggaccgaactgggtcaacaatcttg 47098922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 175 - 269
Target Start/End: Original strand, 13604624 - 13604720
Alignment:
Q  175 tcttgtaaccttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattg-gctgaactgggtcaacaatctt 269  Q
    |||||||||  ||||||||| ||||| |||| ||||||||||||||||||||||||||| |||||| |||||||  |  ||||||||||||||||||    
T  13604624 tcttgtaactctttgtaacattttcatcatagtggattggagagctgctctctcccccatattaggtcatattgaacctaactgggtcaacaatctt 13604720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 19366095 - 19366174
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||    ||||||||||||||||| | |||  ||||||||||||||||||| ||||||| ||||||||||    
T  19366095 caaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgggaaaaatattgtaaacaccttgggt 19366174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 270
Target Start/End: Complemental strand, 32889523 - 32889438
Alignment:
Q  187 ttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    |||||||||||||| | || ||||||||||||||||||| ||||||||| |||| |||||||| | ||||| | ||||||||||||    
T  32889523 ttgtaacactttcatcttagtggattggagagctgctctatcccccagactaggtcatattggaccgaactagatcaacaatcttg 32889438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 19361220 - 19361298
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||    ||||||||||||||||| | |||  |||||||||||||| |||||||||||| ||||||||||    
T  19361220 caaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttggg-aaaacattgtaaacaccttgggt 19361298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 266
Target Start/End: Original strand, 47102874 - 47102935
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaat 266  Q
    |||||||||  |||||||||||||| |||||||| |||||||| | ||||||||||||||||    
T  47102874 tggattggatggctgctctctcccctagattaggtcatattggaccgaactgggtcaacaat 47102935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 9459479 - 9459419
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  9459479 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 9459419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 9463306 - 9463246
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  9463306 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 9463246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 16226386 - 16226446
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  16226386 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 16226446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 19358631 - 19358709
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||    ||||||||||||||||| | |||  ||| |||||||||| |||||||||||| ||||||||||    
T  19358631 caaaggagggaactctagggttgagtgtctttgtagtgaggatcttttgggttggg-aaaacattgtaaacaccttgggt 19358709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 91 - 158
Target Start/End: Original strand, 19366225 - 19366292
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaa 158  Q
    |||||||||||||| || ||||||||| ||| || || ||||||||||||||  |||||| |||||||    
T  19366225 ttttagggttcatattgagagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaa 19366292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 47098633 - 47098693
Alignment:
Q  29 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  47098633 gggttgagtgtctttgtagcgaggttctcttgggttggg--aaacattgtaaacaccttgggt 47098693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 47102647 - 47102707
Alignment:
Q  29 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  47102647 gggttgagtgtctttgtagtgaggttctcttgggttggg--aaacattgtaaacaccttgggt 47102707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 3281995 - 3281936
Alignment:
Q  30 ggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  3281995 ggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 3281936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 13604413 - 13604490
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||    ||||||||| ||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  13604413 caaaggagggaactttagggttgagtatctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 13604490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 23786058 - 23786118
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  23786058 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 23786118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 89
Target Start/End: Complemental strand, 37070055 - 37069998
Alignment:
Q  30 ggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 89  Q
    |||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||    
T  37070055 ggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgg 37069998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 51752582 - 51752642
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    |||||||||| |||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  51752582 tggattggagggctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 51752642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 238; Significance: 1e-131; HSPs: 3)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 56 - 373
Target Start/End: Original strand, 9514 - 9827
Alignment:
Q  56 tcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtg 155  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9514 tcttaggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtaga-tctagggtttgttcatgtg 9612  T
Q  156 taaagcttgaaagctagagtcttgtaaccttttgtaacactttcacatattggattggagagctgctctctcccccagattaggccatattggctgaact 255  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9613 taaagcttgaaggctagagtcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaact 9712  T
Q  256 gggtcaacaatcttgtttggtgttttgttcttccttttaccgcttatcttgtttatgctttggaatctcttgtgtggttttgctatacactagcttaggg 355  Q
    |||||||||||||| |  |||||||||||||||||||    ||||||||||||||||||| |  | ||||||||||||||||||||| ||||||||||||    
T  9713 gggtcaacaatcttctc-ggtgttttgttcttcctttctt-gcttatcttgtttatgctt-gttagctcttgtgtggttttgctatatactagcttaggg 9809  T
Q  356 ctgttttgttgttgtttg 373  Q
    ||||||||||||||||||    
T  9810 ctgttttgttgttgtttg 9827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 10 - 183
Target Start/End: Original strand, 3672 - 3845
Alignment:
Q  10 agcaaaggagggaaccaa-tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgt 108  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  3672 agcaaaggagggaaccaaatgggttgagtgtctttgttgagagtgtctcttaggttaggaaaaacattgtaatcaccttgggttttagggttcatagtgt 3771  T
Q  109 gagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagtcttgtaac 183  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  3772 gagagtgggaaaataccaaagggtag-atctagggtttgttcatgtgtaaagcttgaaggctagagtcttgtaac 3845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 327 - 372
Target Start/End: Original strand, 28 - 73
Alignment:
Q  327 gtgtggttttgctatacactagcttagggctgttttgttgttgttt 372  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  28 gtgtggttttgctatacactagcttagggctgttttgttgttgttt 73  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 27 - 373
Target Start/End: Complemental strand, 605 - 260
Alignment:
Q  27 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaatacca 126  Q
    ||||| || ||| ||||| |||||| || |||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  605 atggggtgtgtgcctttgatgagagagtttcttaggttgggaaaaacattgtaatcaccttgggattttgggttcatagtgtgagagtgggaaaatacca 506  T
Q  127 aagggtagaatctagggtttgttcatgtgtaaagcttga-aagctagagtcttgtaaccttttgtaacactttcacatattggattggagagctgctctc 225  Q
    ||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  505 aagggtagt-tctagggtttgttcatgtgtaaagcttgataagctagagtcttgtaaccttttgtaacactt-cacatattggattggagagctgctctc 408  T
Q  226 tcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttc-ttccttttaccgcttatcttgtttatgctttggaatctc 324  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||| ||||||||||||||| |||  | |||    
T  407 tcccccagattaggccatattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgtttatgc-ttgttagctc 309  T
Q  325 -ttgtgtggttttgctatacactagcttagggctgttttgttgttgtttg 373  Q
     |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  308 tttgtgtggttttgctatacactagcttagggctg-tttgttgttgtttg 260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 148; Significance: 5e-78; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 40 - 307
Target Start/End: Original strand, 14161 - 14433
Alignment:
Q  40 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtagaat 137  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||  ||||||||||||||||  ||||||| |||||||||||||  |    
T  14161 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgaggttgggaaattaccaaagggtagg-t 14259  T
Q  138 ctagggtttgttcatgtgtaaagcttga-aagctagagtcttgtaac-cttttgtaacactttcacatattggattggagagctgctctctcccccagat 235  Q
    |||||||||  || |||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  14260 ctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccagat 14359  T
Q  236 taggccatattggctgaactgggtcaacaatcttgtttggtgttttgttc--ttccttttaccgcttatcttgt 307  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||  || |||||| || |||||||||    
T  14360 taggccacattggctgaactgggtcaacaatcttgcttggtgttttgttcgttttcttttatcgtttatcttgt 14433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 40 - 371
Target Start/End: Original strand, 19017 - 19350
Alignment:
Q  40 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtagaat 137  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||  ||  ||||||||||||||||  ||||||| |||||||||||||| |    
T  19017 ctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttggaattatgggttcatagtgtgaggttgggaaattaccaaagggtaga-t 19115  T
Q  138 ctagggtttgttcatgtgtaaagcttga-aagctagagtcttgtaac-cttttgtaacactttcacatattggattggagagctgctctctcccccagat 235  Q
    |||||||||  || |||||||||||||| |||||||| ||||||||| ||||||||||||  |||||||||| |||||||||||||||||||||||||||    
T  19116 ctagggttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacactcacatattgtattggagagctgctctctcccccagat 19215  T
Q  236 taggccatattggctgaactgggtcaacaatcttgtttggtgttttgttc--ttccttttaccgcttatcttgtttatgctttggaatctctt-gtgtgg 332  Q
    ||||||| | ||||||||||||||||||||||||| | |||| |||||||  || |||||| || ||||||||  ||||| |||  | ||||| ||||||    
T  19216 taggccacaatggctgaactgggtcaacaatcttgctcggtg-tttgttcgttttcttttatcgtttatcttg--tatgc-ttgttagctcttagtgtgg 19311  T
Q  333 ttttgctatacacta-gcttagggctgttttgttgttgtt 371  Q
    |||||||||||| || ||||| ||||||||||||||||||    
T  19312 ttttgctatacattaggctta-ggctgttttgttgttgtt 19350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 135; Significance: 3e-70; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 40 - 371
Target Start/End: Original strand, 2103 - 2436
Alignment:
Q  40 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtagaat 137  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||  ||||||||||||||||  ||||||| |||||||||||||| |    
T  2103 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgaggttgggaaattaccaaagggtaga-t 2201  T
Q  138 ctagggtttgttcatgtgtaaagcttga-aagctagagtcttgtaac-cttttgtaacactttcacatattggattggagagctgctctctcccccagat 235  Q
    ||| |||||  || |||||||||||||| |||||||| ||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  2202 ctatggttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctactctctcccccagat 2301  T
Q  236 taggccatattggctgaactgggtcaacaatcttgtttggtgttttgttc--ttccttttaccgcttatcttgtttatgctttggaatctctt-gtgtgg 332  Q
    ||||||| ||||||||||||||||||||||||||| | |||| |||||||  || | |||| || ||||||||  ||||| |||  | ||||| ||||||    
T  2302 taggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcgttttcctttatcgtttatcttg--tatgc-ttgttagctcttagtgtgg 2397  T
Q  333 ttttgctatacacta-gcttagggctgttttgttgttgtt 371  Q
    |||||||||||| || ||||| ||||||||||||||||||    
T  2398 ttttgctatacattaggctta-ggctgttttgttgttgtt 2436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 135; Significance: 3e-70; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 40 - 371
Target Start/End: Original strand, 148808 - 149141
Alignment:
Q  40 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtagaat 137  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||  ||||||||||||||||  ||||||| |||||||||||||| |    
T  148808 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgaggttgggaaattaccaaagggtaga-t 148906  T
Q  138 ctagggtttgttcatgtgtaaagcttga-aagctagagtcttgtaac-cttttgtaacactttcacatattggattggagagctgctctctcccccagat 235  Q
    ||| |||||  || |||||||||||||| |||||||| ||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  148907 ctatggttttgtcttgtgtaaagcttgataagctagattcttgtaactcttttgtaacacattcacatattggattggagagctactctctcccccagat 149006  T
Q  236 taggccatattggctgaactgggtcaacaatcttgtttggtgttttgttc--ttccttttaccgcttatcttgtttatgctttggaatctctt-gtgtgg 332  Q
    ||||||| ||||||||||||||||||||||||||| | |||| |||||||  || | |||| || ||||||||  ||||| |||  | ||||| ||||||    
T  149007 taggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcgttttcctttatcgtttatcttg--tatgc-ttgttagctcttagtgtgg 149102  T
Q  333 ttttgctatacacta-gcttagggctgttttgttgttgtt 371  Q
    |||||||||||| || ||||| ||||||||||||||||||    
T  149103 ttttgctatacattaggctta-ggctgttttgttgttgtt 149141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 105; Significance: 2e-52; HSPs: 4)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 91 - 371
Target Start/End: Original strand, 17869 - 18147
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagcta-gagtcttgtaaccttttg 189  Q
    |||||||||||||| |||||||||||| ||| || || |||||||| ||| |  |||||| ||||| ||||||| ||||||    |||||||||| ||||    
T  17869 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaaactatgacttgttcttgtgt-aagcttgcaagctatttttcttgtaaccctttg 17967  T
Q  190 taacactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgt-tttgttctt 287  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  17968 taacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-tttggtgtgtttgttctt 18066  T
Q  288 ccttttaccgcttatcttgtttatgctttggaatctcttgtgtggttttgctatacactagcttagggctg--ttttgttgttgtt 371  Q
    || |||   ||||||||||||  ||||||| | |||||  |||||| ||||| ||||||||  ||||||||  |||||||||||||    
T  18067 cc-tttcttgcttatcttgtt--tgctttgtattctct--tgtggtgttgctctacactagtctagggctggtttttgttgttgtt 18147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 91 - 292
Target Start/End: Original strand, 23962 - 24164
Alignment:
Q  91 ttttagggttcatagtgtgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagcta-gagtcttgtaaccttttg 189  Q
    |||||||||||||| |||||||||||| ||| || || |||||||| ||| |  |||||| ||||| ||||||| ||||||    |||||||||| ||||    
T  23962 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaaactatgacttgttcttgtgt-aagcttgcaagctatttttcttgtaaccctttg 24060  T
Q  190 taacactttca-catattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgt-tttgttctt 287  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  24061 taacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-tttggtgtgtttgttctt 24159  T
Q  288 ccttt 292  Q
    |||||    
T  24160 ccttt 24164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 17739 - 17818
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||    ||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||    
T  17739 caaaggagggaactctagggttgagtgtctttgtagagaggatctcttgggttgggaaaaacattgtaatcaccttgggt 17818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 23832 - 23911
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||    ||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||    
T  23832 caaaggagggaactctagggttgagtgtctttgtagagaggatctcttgggttgggaaaaacattgtaatcaccttgggt 23911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 197 - 307
Target Start/End: Original strand, 181976 - 182088
Alignment:
Q  197 ttcacatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgtttggtgttttgttc--ttcctttta 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||  || ||||||    
T  181976 ttcacatattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgcttggtgttttgttcgttttctttta 182075  T
Q  295 ccgcttatcttgt 307  Q
     || |||||||||    
T  182076 tcgtttatcttgt 182088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 134
Target Start/End: Original strand, 176829 - 176925
Alignment:
Q  40 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtag 134  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||  ||||||||||||||||  ||||||| |||||||||||||    
T  176829 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgaggttgggaaattaccaaagggtag 176925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 61; Significance: 4e-26; HSPs: 4)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 175 - 269
Target Start/End: Original strand, 8420 - 8516
Alignment:
Q  175 tcttgtaaccttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatctt 269  Q
    |||||||||  ||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  8420 tcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 8516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 8208 - 8285
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  8208 caaaggagggaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 8285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 22343 - 22403
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  22343 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 22403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 24618 - 24678
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    ||||| |||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  24618 tggatcggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 24678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 175 - 268
Target Start/End: Complemental strand, 85779 - 85684
Alignment:
Q  175 tcttgtaaccttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatct 268  Q
    |||||||||  ||||||||||||||| |||  ||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  85779 tcttgtaactctttgtaacactttcatcatggtggattggagagccgctctctcccccagattaggtcatattggactgaactgggtcaacaatct 85684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 54; Significance: 6e-22; HSPs: 3)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 158 - 269
Target Start/End: Original strand, 43945 - 44058
Alignment:
Q  158 aagcttgaaagctagagtcttgtaaccttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaact 255  Q
    ||||||| ||||||   |||||||||  ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||  |||||||| | |||||    
T  43945 aagcttgcaagctattttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagaatagatcatattggaccgaact 44044  T
Q  256 gggtcaacaatctt 269  Q
    ||||||||||||||    
T  44045 gggtcaacaatctt 44058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 145 - 269
Target Start/End: Original strand, 36804 - 36929
Alignment:
Q  145 ttgttcatgtgtaaagcttgaaagctagagtcttgtaaccttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccat 243  Q
    |||||| ||||||| ||||| ||||||   |||||||||  ||||||||||||||| |||| ||| |||| |||||||||||| ||| |||||||| |||    
T  36804 ttgttcttgtgtaa-gcttgcaagctattttcttgtaactctttgtaacactttcatcatagtgggttggcgagctgctctcttccctagattaggtcat 36902  T
Q  244 attgg-ctgaactgggtcaacaatctt 269  Q
    ||||| | |||||||||||||||||||    
T  36903 attggaccgaactgggtcaacaatctt 36929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 36640 - 36700
Alignment:
Q  29 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    ||||||||||||||||| | |||  |||||||||||||  |||||||||||| ||||||||||    
T  36640 gggttgagtgtctttgtagtgaggatctcttgggttgg--aaaacattgtaaacaccttgggt 36700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 53; Significance: 3e-21; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 184 - 270
Target Start/End: Complemental strand, 5770 - 5682
Alignment:
Q  184 cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    ||||||||||||||||| |||| ||||||| || ||||||||||||||||||||||| |||||||| | ||||||||||||||||||||    
T  5770 cttttgtaacactttcatcatagtggattgaagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttg 5682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 184 - 270
Target Start/End: Complemental strand, 2579 - 2491
Alignment:
Q  184 cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    ||||||||||||||||| |||| |||||||||| |||||| |||||||||||||||| ||||||||   ||||||||||||||||||||    
T  2579 cttttgtaacactttcatcatagtggattggagggctgctgtctcccccagattaggtcatattggagcgaactgggtcaacaatcttg 2491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 175 - 269
Target Start/End: Original strand, 133281 - 133377
Alignment:
Q  175 tcttgtaaccttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattg-gctgaactgggtcaacaatctt 269  Q
    |||||||||  ||||||||| ||||| |||| ||||||||||||||||||||||||||| |||||| |||||||  |  ||||||||||||||||||    
T  133281 tcttgtaactctttgtaacattttcatcatagtggattggagagctgctctctcccccatattaggtcatattgaacctaactgggtcaacaatctt 133377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 133070 - 133147
Alignment:
Q  12 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 91  Q
    |||||||||||||    ||||||||| ||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  133070 caaaggagggaactttagggttgagtttctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 133147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 175 - 270
Target Start/End: Complemental strand, 10826 - 10728
Alignment:
Q  175 tcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaatcttg 270  Q
    ||||||||| ||||||||||||||||| | || ||||||||||||||||||||||||||| |||||| |||||||| | |||||||||||| |||||||    
T  10826 tcttgtaactcttttgtaacactttcatcttagtggattggagagctgctctctcccccaaattaggtcatattggaccgaactgggtcaataatcttg 10728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0978 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0978
Description:

Target: scaffold0978; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 237 - 371
Target Start/End: Original strand, 300 - 431
Alignment:
Q  237 aggccatattggctgaactgggtcaacaatcttgtttggtgttttgttcttccttt-taccgcttatcttgtttatgctttggaatctc-ttgtgtggtt 334  Q
    ||||||||||||||||||| |||||||||||||  |||||||||||||||| |||| ||  ||||||||||||| ||||||   ||||| ||||||||||    
T  300 aggccatattggctgaactaggtcaacaatctt-cttggtgttttgttctttctttcta--gcttatcttgttt-tgctttattatctctttgtgtggtt 395  T
Q  335 ttgctatacactagcttagggctgttttgttgttgtt 371  Q
    |||||   |||||| ||||||||||||| ||||||||    
T  396 ttgctcctcactagtttagggctgtttt-ttgttgtt 431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 187 - 269
Target Start/End: Complemental strand, 45337 - 45253
Alignment:
Q  187 ttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattg-gctgaactgggtcaacaatctt 269  Q
    ||||||| |||||| |||| |||||||||||||||||||||||||||||||||| |||||||  | |||||| ||||||||||||    
T  45337 ttgtaacgctttcatcatagtggattggagagctgctctctcccccagattaggtcatattgaaccgaactgagtcaacaatctt 45253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 266
Target Start/End: Complemental strand, 17360 - 17266
Alignment:
Q  175 tcttgtaac-cttttgtaacactttca-catattggattggagagctgctctctcccccagattaggccatattg-gctgaactgggtcaacaat 266  Q
    ||||||||| ||||||||||||||||| |||| |||||||||| | ||||||||  |||| |||||| |||||||  | ||||||||||||||||    
T  17360 tcttgtaactcttttgtaacactttcatcataatggattggagggttgctctctttcccatattaggtcatattgaaccgaactgggtcaacaat 17266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 269 - 329
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||||||||||    
T  269 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 239
Target Start/End: Complemental strand, 11533 - 11500
Alignment:
Q  206 tggattggagagctgctctctcccccagattagg 239  Q
    ||||||||||||||||||||||||||||| ||||    
T  11533 tggattggagagctgctctctcccccagactagg 11500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 69352 - 69292
Alignment:
Q  206 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggtcaacaa 265  Q
    ||||| ||||||||||||||||||||||| |||| ||  |||| | |||||||||||||||    
T  69352 tggatcggagagctgctctctcccccagactaggtcaatttggaccgaactgggtcaacaa 69292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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