View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11742_low_11 (Length: 242)

Name: NF11742_low_11
Description: NF11742
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11742_low_11
NF11742_low_11
[»] chr5 (4 HSPs)
chr5 (5-228)||(14275945-14276172)
chr5 (7-216)||(37627055-37627262)
chr5 (90-173)||(37803601-37803684)
chr5 (7-80)||(37806299-37806372)
[»] chr4 (1 HSPs)
chr4 (6-228)||(11991764-11991987)
[»] chr1 (1 HSPs)
chr1 (7-228)||(41313585-41313806)
[»] chr7 (3 HSPs)
chr7 (7-228)||(2188129-2188349)
chr7 (7-228)||(1608465-1608685)
chr7 (7-228)||(19632556-19632775)
[»] chr2 (2 HSPs)
chr2 (6-228)||(19215774-19215995)
chr2 (5-225)||(19589515-19589736)
[»] chr8 (4 HSPs)
chr8 (7-228)||(29822902-29823121)
chr8 (12-228)||(451958-452171)
chr8 (44-228)||(7093793-7093976)
chr8 (44-228)||(7097526-7097709)
[»] chr3 (1 HSPs)
chr3 (7-228)||(8377811-8378031)
[»] scaffold0070 (1 HSPs)
scaffold0070 (5-228)||(58603-58824)
[»] scaffold0060 (1 HSPs)
scaffold0060 (188-228)||(16839-16879)


Alignment Details
Target: chr5 (Bit Score: 163; Significance: 4e-87; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 5 - 228
Target Start/End: Complemental strand, 14276172 - 14275945
Alignment:
Q  5 tgtgtctctagcaggtgcttaagacaatgattaatttggt----cggatactcattgtgagcgatctattttgtggagttaataattatgtgtcgcatgc 100  Q
    ||||||||| ||||||| ||||||||||||||||||||||    ||||||||||||||| | |||||||||| ||||||||||||| |||||||||||||    
T  14276172 tgtgtctctggcaggtggttaagacaatgattaatttggttggtcggatactcattgtgtgtgatctattttttggagttaataatcatgtgtcgcatgc 14276073  T
Q  101 atacatttattgtcgtgtggtgcctataattggttgggattcgaagtcttgagtgcccataattggttggggcttatcgtttcttcgttgagtgctcata 200  Q
    ||||||| ||||||| |||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  14276072 atacattcattgtcgcgtggtgcctataattggttgggacctgaagtcttgagtgcccataattggttggggcttatcgtttcttggttgagtgctcata 14275973  T
Q  201 attggttgaggctcgttgttttcttttg 228  Q
    ||||||||||||||||||||||||||||    
T  14275972 attggttgaggctcgttgttttcttttg 14275945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 7 - 216
Target Start/End: Complemental strand, 37627262 - 37627055
Alignment:
Q  7 tgtctctagcaggtgcttaagacaatgattaatttggtcggatactcattgtgagcgatctattttgtggagttaataattatgtgtcgcatgcatacat 106  Q
    ||||||||||||||| ||||||||||||||||||| |||| |||||||||||||| | ||||||| ||||||||||||   | |||||||||||||||||    
T  37627262 tgtctctagcaggtggttaagacaatgattaatttagtcgcatactcattgtgagtggtctattt-gtggagttaatatgcaggtgtcgcatgcatacat 37627164  T
Q  107 ttattgtcgtgtggtgcctataattggttgggattcgaagtcttgagtgcccataattggttggggcttatcgtttcttcgttgagtgctcataattggt 206  Q
    | |||||||  ||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||| |  |||||||||||||||||||    
T  37627163 tcattgtcgcttggtgcccataattggttgggatccgaagtcttgagtgcccataattggttgaggcttattgtttcct-tttgagtgctcataattggt 37627065  T
Q  207 tgaggctcgt 216  Q
    ||||||||||    
T  37627064 tgaggctcgt 37627055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 90 - 173
Target Start/End: Complemental strand, 37803684 - 37803601
Alignment:
Q  90 gtgtcgcatgcatacatttattgtcgtgtggtgcctataattggttgggattcgaagtcttgagtgcccataattggttggggc 173  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||    
T  37803684 gtgtcgcatgcatacattcattgtcgtgtggtgcccataattggttgggacccgaagtcttgagtgcccataattggttggggc 37803601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 37806372 - 37806299
Alignment:
Q  7 tgtctctagcaggtgcttaagacaatgattaatttggtcggatactcattgtgagcgatctattttgtggagtt 80  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||    
T  37806372 tgtctctagcaggtggttaagacaatgattaatttagtcggatactcattgtgagtggtctattttgtggagtt 37806299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 144; Significance: 8e-76; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 6 - 228
Target Start/End: Complemental strand, 11991987 - 11991764
Alignment:
Q  6 gtgtctctagcaggtgctt-aagacaatgattaatttggtcggatactcattgtgagcgatctattttgtggagttaataattatgtgtcgcatgcatac 104  Q
    |||||||||||||||| || |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||  |||||||||| |||| |    
T  11991987 gtgtctctagcaggtggtttaagacaatgattaatttggtcgaatactcattgtgagtgatctattttgtggagttaataaccatgtgtcgcaagcatgc 11991888  T
Q  105 atttattgtcgtgtggtgcctataattggttgggattcgaagtcttgagtgcccataattggttggggcttatcgtttcttcgttgagtgctcataattg 204  Q
    ||| |||||||  ||||||| ||||||||||||||  | |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  11991887 attcattgtcgcatggtgcccataattggttgggacccaaagtcttgagtgcccataattggttgaggcttatcgtttcttggttgagtgctcataattg 11991788  T
Q  205 gttgaggctcgttgttttcttttg 228  Q
    |||||||||||||| |||| ||||    
T  11991787 gttgaggctcgttgatttcatttg 11991764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 7 - 228
Target Start/End: Complemental strand, 41313806 - 41313585
Alignment:
Q  7 tgtctctagcaggtgcttaagacaatgattaatttggtcggatactcattgtgagcgatctattttgtggagttaataattatgtgtcgcatgcatacat 106  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||  | |||||||||||||||||    
T  41313806 tgtctctagcaggtggttaagacaatgattaatttagtcggatactcattgtgagtggtctattttgtggagttaataagcaggtgtcgcatgcatacat 41313707  T
Q  107 ttattgtcgtgtggtgcctataattggttgggattcgaagtcttgagtgcccataattggttggggcttatcgtttcttcgttgagtgctcataattggt 206  Q
    | ||||||| |||||||  ||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||||||    
T  41313706 tcattgtcgcgtggtgctcataattggttgggacccgaagtcttgagtgcccataattggttggggcttattgtttcct-tttgagtgctcataattggt 41313608  T
Q  207 tgaggctcgttgt-tttcttttg 228  Q
    ||||||||||||| |||||||||    
T  41313607 tgaggctcgttgtctttcttttg 41313585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 142; Significance: 1e-74; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 7 - 228
Target Start/End: Original strand, 2188129 - 2188349
Alignment:
Q  7 tgtctctagcaggtgcttaagacaatgattaatttggtcggatactcattgtgagcgatctattttgtggagttaataattatgtgtcgcatgcatacat 106  Q
    ||||||||||||||| ||||||||||||||||||  ||||||||||||||||||| | |||||||||||||||||||||  | |||||||||||||||||    
T  2188129 tgtctctagcaggtggttaagacaatgattaattaagtcggatactcattgtgagtggtctattttgtggagttaataagcaggtgtcgcatgcatacat 2188228  T
Q  107 ttattgtcgtgtggtgcctataattggttgggattcgaagtcttgagtgcccataattggttggggcttatcgtttcttcgttgagtgctcataattggt 206  Q
    | ||||||| |||||||  ||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||||||    
T  2188229 tcattgtcgcgtggtgctcataattggttgggacccgaagtcttgagtgcccataattggttggggcttattgtttcct-tttgagtgctcataattggt 2188327  T
Q  207 tgaggctcgttgttttcttttg 228  Q
    ||||||||||||| ||||||||    
T  2188328 tgaggctcgttgtcttcttttg 2188349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 7 - 228
Target Start/End: Complemental strand, 1608685 - 1608465
Alignment:
Q  7 tgtctctagcaggtgcttaagacaatgattaatttggtcggatactcattgtgagcgatctattttgtggagttaataattatgtgtcgcatgcatacat 106  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| | ||||| |||||||||||||||  | |||||||||||||||||    
T  1608685 tgtctctagcaggtggttaagacaatgattaatttagtcggatactcattgtgagtggtctatcttgtggagttaataagcaggtgtcgcatgcatacat 1608586  T
Q  107 ttattgtcgtgtggtgcctataattggttgggattcgaagtcttgagtgcccataattggttggggcttatcgtttcttcgttgagtgctcataattggt 206  Q
    | || |||| |||||||| ||||||||||||||  | |||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||||||    
T  1608585 tcatggtcgcgtggtgcccataattggttgggaccctaagtcttgagtgcccataattggttggggcttattgtttcct-tttgagtgctcataattggt 1608487  T
Q  207 tgaggctcgttgttttcttttg 228  Q
    |||||||| ||| |||||||||    
T  1608486 tgaggctctttgatttcttttg 1608465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 7 - 228
Target Start/End: Complemental strand, 19632775 - 19632556
Alignment:
Q  7 tgtctctagcaggtgcttaagacaatgattaatttggtcggatactcattgtgagcgatctattttgtggagttaataattatgtgtcgcatgcatacat 106  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||  | |||||||||||||||||    
T  19632775 tgtctctagcaggtggttaagacaatgattaatttagtcggatactcattgtgagtggtctattttgtggagttaataagcaggtgtcgcatgcatacat 19632676  T
Q  107 ttattgtcgtgtggtgcctataattggttgggattcgaagtcttgagtgcccataattggttggggcttatcgtttcttcgttgagtgctcataattggt 206  Q
    | | ||||| |||||||  ||||||||||||||  |||||||||||||| ||||||||||||||||||||| ||||| |  |||||||||||||||||||    
T  19632675 tcagtgtcgcgtggtgctcataattggttgggacccgaagtcttgagtg-ccataattggttggggcttattgtttcct-tttgagtgctcataattggt 19632578  T
Q  207 tgaggctcgttgttttcttttg 228  Q
    ||||||| ||||| ||||||||    
T  19632577 tgaggcttgttgtcttcttttg 19632556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 131; Significance: 4e-68; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 6 - 228
Target Start/End: Original strand, 19215774 - 19215995
Alignment:
Q  6 gtgtctctagcaggtgcttaagacaatgattaatttggtcggatactcattgtgagcgatctattttgtggagttaataattatgtgtcgcatgcataca 105  Q
    |||||||||||||||| |||||| |||||||||||| ||||||||||||||||||| |  ||||||||||||||||||||  | |||| |||||||||||    
T  19215774 gtgtctctagcaggtggttaagataatgattaatttagtcggatactcattgtgagtggcctattttgtggagttaataagcaggtgttgcatgcataca 19215873  T
Q  106 tttattgtcgtgtggtgcctataattggttgggattcgaagtcttgagtgcccataattggttggggcttatcgtttcttcgttgagtgctcataattgg 205  Q
    || |||||||  ||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||| |  ||||||||||||||||||    
T  19215874 ttcattgtcgcatggtgcccataattggttgggacccgaagtcttgagtgcccataattggttggggcttattgtttcct-tttgagtgctcataattgg 19215972  T
Q  206 ttgaggctcgttgttttcttttg 228  Q
    || ||||||||||| ||||||||    
T  19215973 tttaggctcgttgtcttcttttg 19215995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 225
Target Start/End: Original strand, 19589515 - 19589736
Alignment:
Q  5 tgtgtctctagcaggtgcttaagacaatgattaatttggtcggatactcattgtgagcgatctattttg-tggagttaat-aattatgtgtcgcatgcat 102  Q
    |||||||||||  |||| |||  ||||  |||||||| || ||||||||| ||| |  ||||||||||  |||||||||| ||  |||| |  |||||||    
T  19589515 tgtgtctctagatggtggttagaacaaccattaatttagttggatactcagtgtaattgatctatttttatggagttaattaaccatgtattacatgcat 19589614  T
Q  103 acatttattgtcgtgtggtgcctataattggttgggattcgaagtcttgagtgcccataattggttggggcttatcgtttcttcgttgagtgctcataat 202  Q
    | ||| || |||||||| |||| |||||||||||| |  | ||||||||||||||| ||||||||||||| || |||||| |   ||||||| |||||||    
T  19589615 atattcatcgtcgtgtgctgcccataattggttggaaccctaagtcttgagtgcccgtaattggttggggtttgtcgttt-tgttttgagtgttcataat 19589713  T
Q  203 tggttgaggctcgttgttttctt 225  Q
    |||||||| ||||||||||||||    
T  19589714 tggttgagactcgttgttttctt 19589736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 130; Significance: 2e-67; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 7 - 228
Target Start/End: Original strand, 29822902 - 29823121
Alignment:
Q  7 tgtctctagcaggtgcttaagacaatgattaatttggtcggatactcattgtgagcgatctattttgtggagttaataattatgtgtcgcatgcatacat 106  Q
    ||||||||||||||| ||||||| ||||||||||| ||| ||||||||||||||| | ||||||||||||||| |||||  | |||||||||||||||||    
T  29822902 tgtctctagcaggtggttaagaccatgattaatttagtcagatactcattgtgagtggtctattttgtggagt-aataagcaggtgtcgcatgcatacat 29823000  T
Q  107 ttattgtcgtgtggtgcctataattggttgggattcgaagtcttgagtgcccataattggttggggcttatcgtttcttcgttgagtgctcataattggt 206  Q
    | ||||||| |||||||| ||||||||||||||  |||||||||||| ||||||||||||||||||||||| ||||| |  |||||||||||||||||||    
T  29823001 tcattgtcgcgtggtgcccataattggttgggacccgaagtcttgagcgcccataattggttggggcttattgtttcct-tttgagtgctcataattggt 29823099  T
Q  207 tgaggctcgttgttttcttttg 228  Q
    ||||||||||||| ||||||||    
T  29823100 tgaggctcgttgtcttcttttg 29823121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 12 - 228
Target Start/End: Complemental strand, 452171 - 451958
Alignment:
Q  12 ctagcaggtgcttaagacaatgattaatttggtcggatactcattgtgagcgatctattttgtggagttaataattatgtgtcgcatgcatacatttatt 111  Q
    |||||||||| ||||||  ||||||||||| ||||| ||||||||  ||||| | | |||||||||||||||||| | ||||| |||||||||||| |||    
T  452171 ctagcaggtggttaaga--atgattaatttagtcggttactcattaagagcggtgttttttgtggagttaataatcaggtgtcacatgcatacattcatt 452074  T
Q  112 gtcgtgtggtgcctataattggttgggattcgaagtcttgagtgcccataattggttggggcttatcgtttcttcgttgagtgctcataattggttgagg 211  Q
    ||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||| |  ||||||||||||||||||||| |     
T  452073 gtcgtgtggtgcccataattggttgggacccgaagtcttgagtgcccataattggttggggcttattgtttcct-tttgagtgctcataattggttggga 451975  T
Q  212 ctcgttgttttcttttg 228  Q
    ||||||| |||||||||    
T  451974 ctcgttgatttcttttg 451958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 44 - 228
Target Start/End: Complemental strand, 7093976 - 7093793
Alignment:
Q  44 tcggatactcattgtgagcgatctattttgtggagttaataattatgtgtcgcatgcatacatttattgtcgtgtggtgcctataattggttgggattcg 143  Q
    ||||||| ||||||||||   ||||||| ||||||||||||   | |||||||||||||||||| ||||| | |||||||| |||||||||| |||  ||    
T  7093976 tcggatattcattgtgagttgtctatttggtggagttaatatgcaggtgtcgcatgcatacattcattgttgcgtggtgcccataattggttaggacccg 7093877  T
Q  144 aagtcttgagtgcccataattggttggggcttatcgtttcttcgttgagtgctcataattggttgaggctcgttgttttcttttg 228  Q
    |||||||||||||||||||||||||||||||||| ||||| | | |||||||||||||||||||||||||||||| |||||||||    
T  7093876 aagtcttgagtgcccataattggttggggcttattgtttccttg-tgagtgctcataattggttgaggctcgttgatttcttttg 7093793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 44 - 228
Target Start/End: Complemental strand, 7097709 - 7097526
Alignment:
Q  44 tcggatactcattgtgagcgatctattttgtggagttaataattatgtgtcgcatgcatacatttattgtcgtgtggtgcctataattggttgggattcg 143  Q
    ||||||| ||||||||||   ||||||| ||||||||||||   | |||||||||||||||||| ||||| | |||||||| |||||||||| |||  ||    
T  7097709 tcggatattcattgtgagttgtctatttggtggagttaatatgcaggtgtcgcatgcatacattcattgttgcgtggtgcccataattggttaggacccg 7097610  T
Q  144 aagtcttgagtgcccataattggttggggcttatcgtttcttcgttgagtgctcataattggttgaggctcgttgttttcttttg 228  Q
    |||||||||||||||||||||||||||||||||| ||||| | | |||||||||||||||||||||||||||||| |||||||||    
T  7097609 aagtcttgagtgcccataattggttggggcttattgtttccttg-tgagtgctcataattggttgaggctcgttgatttcttttg 7097526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 7 - 228
Target Start/End: Original strand, 8377811 - 8378031
Alignment:
Q  7 tgtctctagcaggtgcttaagacaatgattaatttggtcggatactcattgtgagcgatctattttgtggagttaataattatgtgtcgcatgcatacat 106  Q
    ||||||||||||||| |||||||| |||||||||| |||||||| ||||||||||   ||||||||||||||||||||   | |||||||||||||||||    
T  8377811 tgtctctagcaggtggttaagacagtgattaatttagtcggatattcattgtgagttgtctattttgtggagttaatatgcaggtgtcgcatgcatacat 8377910  T
Q  107 ttattgtcgtgtggtgcctataattggttgggattcgaagtcttgagtgcccataattggttggggcttatcgtttcttcgttgagtgctcataattggt 206  Q
    | ||||| | |||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||| | | ||||||||||||||||||    
T  8377911 tcattgttgcgtggtgcccataattggttgggacccgaagtcttgagtgcccataattggttggggcttattgtttccttg-tgagtgctcataattggt 8378009  T
Q  207 tgaggctcgttgttttcttttg 228  Q
    |||||| ||||| |||||||||    
T  8378010 tgaggcccgttgatttcttttg 8378031  T

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Target: scaffold0070 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 5 - 228
Target Start/End: Complemental strand, 58824 - 58603
Alignment:
Q  5 tgtgtctctagcaggtgcttaagacaatgattaatttggtcggatactcattgtgagcgatctattttgtggagttaataattatgtgtcgcatgcatac 104  Q
    ||||||||||||||||| ||||||  ||||||||||| ||||| |||||||| |||| | | | ||||||||| |||||||  |  ||||||||||||||    
T  58824 tgtgtctctagcaggtggttaaga--atgattaatttagtcggttactcattatgagaggtgttttttgtggaattaataaccagctgtcgcatgcatac 58727  T
Q  105 atttattgtcgtgtggtgcctataattggttgggattcgaagtcttgagtgcccataattggttggggcttatcgtttcttcgttgagtgctcataattg 204  Q
    ||| ||||||| |||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||||    
T  58726 attcattgtcgcgtggtgcccataattggttgggacccgaagtcttgagtgcccataattggttggggcttattgtttcctttttgagtgctcataattg 58627  T
Q  205 gttgaggctcgttgttttcttttg 228  Q
    ||||||||||||||| ||||||||    
T  58626 gttgaggctcgttgtcttcttttg 58603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 228
Target Start/End: Original strand, 16839 - 16879
Alignment:
Q  188 ttgagtgctcataattggttgaggctcgttgttttcttttg 228  Q
    |||||||||||||||||||||||| |||||| |||||||||    
T  16839 ttgagtgctcataattggttgaggttcgttgatttcttttg 16879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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