View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11743_low_13 (Length: 364)

Name: NF11743_low_13
Description: NF11743
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11743_low_13
NF11743_low_13
[»] chr5 (50 HSPs)
chr5 (9-139)||(12358532-12358662)
chr5 (142-211)||(3518297-3518366)
chr5 (142-211)||(10469835-10469904)
chr5 (142-211)||(35358823-35358892)
chr5 (143-211)||(31625965-31626033)
chr5 (141-211)||(1108112-1108186)
chr5 (140-201)||(29765955-29766016)
chr5 (140-204)||(8761768-8761832)
chr5 (287-347)||(18638858-18638918)
chr5 (142-211)||(35616689-35616758)
chr5 (143-211)||(12612906-12612974)
chr5 (280-328)||(39032630-39032678)
chr5 (280-327)||(3031832-3031879)
chr5 (161-204)||(5005234-5005277)
chr5 (280-327)||(18729315-18729362)
chr5 (280-327)||(29765828-29765875)
chr5 (139-213)||(34698888-34698961)
chr5 (141-211)||(37821028-37821098)
chr5 (281-322)||(25585483-25585524)
chr5 (280-328)||(12891122-12891170)
chr5 (280-327)||(24330008-24330055)
chr5 (281-327)||(14522991-14523037)
chr5 (141-206)||(17574111-17574176)
chr5 (141-210)||(35924385-35924454)
chr5 (142-211)||(39032492-39032561)
chr5 (143-211)||(8442273-8442341)
chr5 (284-324)||(8761646-8761686)
chr5 (288-328)||(12203155-12203195)
chr5 (280-328)||(31626102-31626150)
chr5 (287-322)||(7077375-7077410)
chr5 (141-204)||(9940175-9940238)
chr5 (286-321)||(12612909-12612944)
chr5 (280-327)||(14914370-14914417)
chr5 (280-327)||(20985555-20985602)
chr5 (148-211)||(43152954-43153017)
chr5 (280-322)||(1107984-1108026)
chr5 (280-322)||(9594481-9594523)
chr5 (280-322)||(9599754-9599796)
chr5 (148-210)||(22864273-22864335)
chr5 (280-322)||(28501595-28501637)
chr5 (280-322)||(30574403-30574445)
chr5 (280-322)||(37821151-37821193)
chr5 (288-322)||(38387613-38387647)
chr5 (281-322)||(3263535-3263576)
chr5 (280-324)||(5005103-5005148)
chr5 (285-322)||(18695321-18695358)
chr5 (281-325)||(11464149-11464193)
chr5 (285-329)||(32639039-32639082)
chr5 (288-328)||(38919860-38919900)
chr5 (143-211)||(38919960-38920028)
[»] chr1 (77 HSPs)
chr1 (139-211)||(37741837-37741909)
chr1 (141-211)||(31666093-31666163)
chr1 (142-206)||(27787608-27787672)
chr1 (141-204)||(43757707-43757770)
chr1 (140-206)||(644815-644881)
chr1 (141-211)||(46903584-46903654)
chr1 (142-211)||(2827598-2827667)
chr1 (142-211)||(49615163-49615232)
chr1 (141-204)||(40053027-40053090)
chr1 (141-211)||(24158764-24158834)
chr1 (142-211)||(6396441-6396510)
chr1 (142-211)||(21446106-21446175)
chr1 (280-327)||(48336464-48336511)
chr1 (144-201)||(28457237-28457294)
chr1 (139-211)||(23399874-23399946)
chr1 (139-206)||(8312264-8312331)
chr1 (280-322)||(6396330-6396372)
chr1 (141-211)||(41564767-41564837)
chr1 (280-322)||(41564906-41564948)
chr1 (142-211)||(29638829-29638898)
chr1 (287-327)||(2257727-2257767)
chr1 (280-316)||(11897183-11897219)
chr1 (142-211)||(44714355-44714426)
chr1 (280-327)||(1100215-1100262)
chr1 (144-199)||(21263149-21263204)
chr1 (280-327)||(21854490-21854537)
chr1 (280-327)||(24158648-24158695)
chr1 (164-211)||(43105219-43105266)
chr1 (140-211)||(48962100-48962171)
chr1 (280-322)||(5574285-5574327)
chr1 (280-322)||(8577528-8577570)
chr1 (280-322)||(12990495-12990537)
chr1 (280-322)||(28457373-28457415)
chr1 (280-322)||(41425245-41425287)
chr1 (287-329)||(49189241-49189283)
chr1 (280-329)||(578800-578849)
chr1 (281-322)||(23400016-23400057)
chr1 (287-320)||(49314368-49314401)
chr1 (280-328)||(11038259-11038307)
chr1 (286-322)||(22331369-22331405)
chr1 (287-327)||(26910430-26910470)
chr1 (280-328)||(42256457-42256505)
chr1 (280-327)||(835869-835916)
chr1 (288-327)||(10385425-10385464)
chr1 (140-175)||(11038406-11038441)
chr1 (148-211)||(19920876-19920939)
chr1 (280-319)||(26760568-26760607)
chr1 (283-322)||(27787492-27787531)
chr1 (148-211)||(37947114-37947177)
chr1 (280-327)||(39815344-39815391)
chr1 (288-327)||(46903479-46903518)
chr1 (164-211)||(51436342-51436388)
chr1 (280-322)||(12999848-12999890)
chr1 (288-322)||(16252782-16252816)
chr1 (288-322)||(19427524-19427558)
chr1 (285-327)||(21433432-21433474)
chr1 (280-322)||(22674715-22674757)
chr1 (280-326)||(25130702-25130748)
chr1 (141-211)||(27954342-27954412)
chr1 (288-322)||(30596726-30596760)
chr1 (280-322)||(35972830-35972872)
chr1 (288-322)||(43757602-43757636)
chr1 (280-322)||(50035563-50035605)
chr1 (288-322)||(50460735-50460769)
chr1 (280-329)||(27352626-27352675)
chr1 (280-328)||(49615303-49615349)
chr1 (285-321)||(2492417-2492453)
chr1 (288-328)||(9011642-9011682)
chr1 (141-201)||(11796428-11796488)
chr1 (284-328)||(16234324-16234368)
chr1 (280-328)||(18610770-18610818)
chr1 (291-327)||(30414873-30414909)
chr1 (288-328)||(40596077-40596117)
chr1 (287-327)||(43196122-43196162)
chr1 (139-211)||(48028640-48028711)
chr1 (281-313)||(48390104-48390136)
chr1 (286-322)||(48634483-48634519)
[»] chr3 (86 HSPs)
chr3 (141-211)||(2280291-2280361)
chr3 (142-211)||(16295578-16295647)
chr3 (143-211)||(29533875-29533943)
chr3 (135-211)||(50025566-50025642)
chr3 (140-211)||(38471756-38471827)
chr3 (139-211)||(14847403-14847475)
chr3 (142-211)||(1261263-1261332)
chr3 (142-211)||(9557820-9557889)
chr3 (141-206)||(42643356-42643421)
chr3 (142-213)||(34208379-34208450)
chr3 (145-214)||(884648-884717)
chr3 (142-211)||(33971997-33972066)
chr3 (148-201)||(47140569-47140622)
chr3 (144-211)||(33074987-33075054)
chr3 (281-322)||(38471645-38471686)
chr3 (281-325)||(17118397-17118441)
chr3 (141-213)||(27276846-27276918)
chr3 (140-204)||(31763928-31763992)
chr3 (141-211)||(36301097-36301165)
chr3 (280-322)||(2280180-2280222)
chr3 (141-211)||(9027727-9027797)
chr3 (280-322)||(14839071-14839113)
chr3 (280-322)||(44689795-44689837)
chr3 (142-211)||(43149231-43149300)
chr3 (141-189)||(52383135-52383183)
chr3 (281-328)||(9159063-9159110)
chr3 (140-211)||(10565166-10565236)
chr3 (280-327)||(50025724-50025771)
chr3 (280-322)||(11327111-11327153)
chr3 (141-211)||(14838932-14839002)
chr3 (284-322)||(14847548-14847586)
chr3 (280-322)||(16295467-16295509)
chr3 (284-322)||(25595943-25595981)
chr3 (280-322)||(30664506-30664548)
chr3 (280-334)||(36301234-36301288)
chr3 (280-322)||(42643238-42643280)
chr3 (280-322)||(47141626-47141668)
chr3 (284-322)||(52381185-52381223)
chr3 (280-322)||(54233494-54233536)
chr3 (285-322)||(3210667-3210704)
chr3 (146-211)||(32152007-32152072)
chr3 (281-322)||(38296689-38296730)
chr3 (281-322)||(42888799-42888840)
chr3 (280-328)||(8254024-8254072)
chr3 (280-328)||(9027610-9027658)
chr3 (146-214)||(25559815-25559883)
chr3 (142-210)||(29555729-29555797)
chr3 (280-328)||(29555864-29555912)
chr3 (281-329)||(33971879-33971927)
chr3 (280-328)||(36818953-36819001)
chr3 (287-323)||(40478320-40478356)
chr3 (287-322)||(7949794-7949829)
chr3 (285-328)||(16479629-16479671)
chr3 (288-327)||(29846914-29846953)
chr3 (287-322)||(41877691-41877726)
chr3 (148-211)||(43900886-43900949)
chr3 (284-327)||(45517687-45517730)
chr3 (140-211)||(47683904-47683975)
chr3 (284-327)||(48405408-48405451)
chr3 (280-322)||(25559707-25559749)
chr3 (137-175)||(26548671-26548709)
chr3 (288-322)||(29057662-29057696)
chr3 (280-322)||(32931944-32931986)
chr3 (141-175)||(52381253-52381287)
chr3 (287-329)||(54134848-54134890)
chr3 (281-322)||(7351665-7351706)
chr3 (285-322)||(29573387-29573424)
chr3 (285-322)||(47101525-47101562)
chr3 (281-322)||(48944737-48944778)
chr3 (287-328)||(49361857-49361898)
chr3 (299-328)||(50745366-50745395)
chr3 (288-333)||(50745552-50745597)
chr3 (281-322)||(55264820-55264861)
chr3 (300-328)||(1436813-1436841)
chr3 (280-328)||(9557948-9557996)
chr3 (280-328)||(20714240-20714288)
chr3 (143-211)||(25806413-25806481)
chr3 (280-328)||(27162495-27162543)
chr3 (280-316)||(29057476-29057512)
chr3 (280-328)||(30400182-30400230)
chr3 (287-323)||(32187143-32187179)
chr3 (287-327)||(35074123-35074163)
chr3 (287-327)||(43169775-43169815)
chr3 (288-328)||(49196693-49196733)
chr3 (183-211)||(50879709-50879737)
chr3 (280-328)||(53932417-53932465)
[»] chr8 (58 HSPs)
chr8 (144-211)||(38939082-38939149)
chr8 (141-211)||(5742544-5742614)
chr8 (143-214)||(34578226-34578297)
chr8 (141-211)||(45405722-45405792)
chr8 (142-211)||(28156317-28156386)
chr8 (141-211)||(32674119-32674189)
chr8 (280-322)||(5742683-5742725)
chr8 (141-211)||(33635689-33635759)
chr8 (280-328)||(32674258-32674306)
chr8 (281-328)||(18411322-18411369)
chr8 (280-327)||(28156201-28156248)
chr8 (280-327)||(35701853-35701900)
chr8 (148-211)||(42651034-42651097)
chr8 (280-322)||(21649194-21649236)
chr8 (281-327)||(22203242-22203288)
chr8 (280-322)||(27300349-27300391)
chr8 (141-211)||(28713207-28713277)
chr8 (141-211)||(28720554-28720624)
chr8 (141-211)||(28728196-28728266)
chr8 (141-214)||(18550090-18550163)
chr8 (138-211)||(25430760-25430833)
chr8 (281-322)||(37784401-37784442)
chr8 (143-210)||(34883279-34883346)
chr8 (281-327)||(4148682-4148728)
chr8 (280-322)||(23708979-23709021)
chr8 (280-329)||(28713089-28713138)
chr8 (280-329)||(28720436-28720485)
chr8 (280-329)||(28728078-28728127)
chr8 (281-322)||(34578404-34578445)
chr8 (288-328)||(13924019-13924059)
chr8 (280-327)||(3893424-3893471)
chr8 (287-326)||(6105469-6105508)
chr8 (164-211)||(14233554-14233601)
chr8 (280-327)||(22836165-22836212)
chr8 (287-322)||(29509269-29509304)
chr8 (287-322)||(36675339-36675374)
chr8 (287-322)||(43602456-43602491)
chr8 (287-322)||(45405841-45405876)
chr8 (287-321)||(102348-102382)
chr8 (280-326)||(14228706-14228752)
chr8 (280-322)||(18549982-18550024)
chr8 (282-328)||(20288530-20288576)
chr8 (282-328)||(21075159-21075205)
chr8 (280-322)||(35937538-35937580)
chr8 (280-322)||(40459788-40459830)
chr8 (286-328)||(42651064-42651106)
chr8 (280-322)||(44001034-44001076)
chr8 (286-327)||(1248251-1248292)
chr8 (280-325)||(6656371-6656416)
chr8 (280-325)||(6736773-6736818)
chr8 (285-322)||(10644833-10644870)
chr8 (291-328)||(25430654-25430691)
chr8 (281-322)||(34838297-34838338)
chr8 (286-327)||(45253640-45253681)
chr8 (284-328)||(5771906-5771950)
chr8 (140-204)||(33692842-33692906)
chr8 (139-211)||(34838155-34838227)
chr8 (287-327)||(43587639-43587679)
[»] chr7 (57 HSPs)
chr7 (141-211)||(2600421-2600491)
chr7 (142-211)||(640506-640575)
chr7 (142-211)||(37970047-37970116)
chr7 (145-211)||(47379674-47379740)
chr7 (146-211)||(28548127-28548192)
chr7 (141-204)||(11070349-11070412)
chr7 (148-214)||(41458794-41458860)
chr7 (280-329)||(640388-640437)
chr7 (280-325)||(45335862-45335907)
chr7 (140-211)||(384665-384736)
chr7 (280-327)||(28548247-28548294)
chr7 (280-327)||(48639409-48639456)
chr7 (280-322)||(2600560-2600602)
chr7 (280-322)||(11789717-11789759)
chr7 (280-322)||(30538629-30538671)
chr7 (142-214)||(33341012-33341085)
chr7 (280-321)||(41910211-41910252)
chr7 (280-328)||(27704432-27704480)
chr7 (142-194)||(27943088-27943140)
chr7 (280-327)||(41538480-41538527)
chr7 (280-322)||(11070231-11070273)
chr7 (280-322)||(23034339-23034381)
chr7 (280-322)||(33050186-33050228)
chr7 (280-322)||(37969934-37969976)
chr7 (142-211)||(23034201-23034270)
chr7 (142-211)||(45335977-45336046)
chr7 (280-328)||(30864443-30864491)
chr7 (287-327)||(48522154-48522194)
chr7 (280-327)||(4971288-4971335)
chr7 (287-322)||(34349060-34349095)
chr7 (280-327)||(44511137-44511184)
chr7 (280-322)||(47944985-47945028)
chr7 (280-322)||(47950415-47950458)
chr7 (280-322)||(2347085-2347127)
chr7 (288-322)||(25272605-25272639)
chr7 (288-322)||(27866560-27866594)
chr7 (280-322)||(29763833-29763875)
chr7 (141-187)||(32747370-32747416)
chr7 (289-327)||(33223564-33223602)
chr7 (281-327)||(33341152-33341198)
chr7 (284-322)||(40207830-40207868)
chr7 (280-322)||(41458926-41458968)
chr7 (141-211)||(47945097-47945167)
chr7 (141-211)||(47950527-47950597)
chr7 (142-211)||(24380609-24380678)
chr7 (146-211)||(27704549-27704614)
chr7 (281-322)||(35491438-35491479)
chr7 (281-322)||(37325846-37325887)
chr7 (281-322)||(39533412-39533453)
chr7 (287-327)||(5378625-5378665)
chr7 (280-328)||(5868328-5868376)
chr7 (286-322)||(7295453-7295489)
chr7 (280-328)||(24700118-24700166)
chr7 (287-327)||(36108170-36108210)
chr7 (142-214)||(36108283-36108354)
chr7 (280-328)||(37385259-37385307)
chr7 (287-327)||(42060654-42060694)
[»] chr2 (68 HSPs)
chr2 (141-211)||(40721885-40721955)
chr2 (141-211)||(34373122-34373192)
chr2 (141-203)||(38724204-38724266)
chr2 (142-211)||(43026050-43026119)
chr2 (140-204)||(24727523-24727587)
chr2 (147-211)||(25094466-25094530)
chr2 (143-211)||(9377647-9377715)
chr2 (142-201)||(1151653-1151712)
chr2 (143-204)||(4858234-4858295)
chr2 (142-211)||(27328997-27329066)
chr2 (139-211)||(35518389-35518461)
chr2 (141-211)||(304879-304949)
chr2 (142-204)||(11728009-11728071)
chr2 (146-204)||(13850076-13850134)
chr2 (280-328)||(30339990-30340038)
chr2 (280-328)||(40721768-40721816)
chr2 (140-211)||(8757658-8757729)
chr2 (280-322)||(5852477-5852519)
chr2 (280-322)||(11728147-11728189)
chr2 (146-204)||(37827677-37827735)
chr2 (142-211)||(23141468-23141537)
chr2 (142-211)||(23553258-23553327)
chr2 (142-211)||(30340108-30340177)
chr2 (280-324)||(17999747-17999791)
chr2 (280-328)||(38027641-38027689)
chr2 (284-327)||(12208440-12208483)
chr2 (280-327)||(19637227-19637274)
chr2 (280-327)||(19835820-19835867)
chr2 (280-327)||(27529527-27529574)
chr2 (280-327)||(34141440-34141487)
chr2 (284-322)||(3839413-3839451)
chr2 (280-322)||(6328670-6328712)
chr2 (288-322)||(24727429-24727463)
chr2 (280-322)||(25094355-25094397)
chr2 (280-322)||(28679131-28679173)
chr2 (280-322)||(34373008-34373050)
chr2 (280-322)||(35203775-35203817)
chr2 (280-322)||(44897629-44897671)
chr2 (288-329)||(11828843-11828884)
chr2 (142-211)||(12257015-12257084)
chr2 (142-211)||(19523289-19523358)
chr2 (142-211)||(34141557-34141626)
chr2 (288-328)||(27329132-27329172)
chr2 (287-327)||(30413759-30413799)
chr2 (288-327)||(305006-305045)
chr2 (280-322)||(12256904-12256946)
chr2 (280-322)||(18749389-18749431)
chr2 (280-322)||(26387885-26387927)
chr2 (288-322)||(27538939-27538973)
chr2 (141-211)||(28679241-28679311)
chr2 (280-322)||(30487495-30487537)
chr2 (165-203)||(33569690-33569728)
chr2 (280-322)||(36909869-36909911)
chr2 (280-322)||(44484682-44484724)
chr2 (286-327)||(5031921-5031962)
chr2 (287-328)||(7498024-7498065)
chr2 (281-322)||(11126466-11126507)
chr2 (280-329)||(34144577-34144626)
chr2 (280-324)||(3366423-3366467)
chr2 (142-210)||(5852573-5852641)
chr2 (287-327)||(6666018-6666058)
chr2 (284-328)||(12877460-12877504)
chr2 (299-327)||(16447291-16447319)
chr2 (287-327)||(19529540-19529580)
chr2 (280-328)||(27307257-27307305)
chr2 (140-204)||(32755799-32755863)
chr2 (165-201)||(38533109-38533145)
chr2 (281-317)||(43514900-43514936)
[»] scaffold0036 (1 HSPs)
scaffold0036 (145-211)||(54553-54619)
[»] chr4 (75 HSPs)
chr4 (142-214)||(36946980-36947052)
chr4 (140-211)||(4949120-4949191)
chr4 (141-204)||(46309010-46309073)
chr4 (142-204)||(1987601-1987663)
chr4 (140-211)||(30250184-30250255)
chr4 (140-211)||(37732063-37732134)
chr4 (143-211)||(9827874-9827942)
chr4 (142-205)||(26442276-26442339)
chr4 (145-204)||(34538051-34538110)
chr4 (144-209)||(6093495-6093560)
chr4 (142-194)||(46686356-46686408)
chr4 (141-197)||(55960828-55960884)
chr4 (280-327)||(26442416-26442463)
chr4 (280-322)||(29863554-29863596)
chr4 (280-322)||(31318756-31318798)
chr4 (281-327)||(35037607-35037653)
chr4 (280-322)||(43307395-43307437)
chr4 (280-329)||(23133563-23133612)
chr4 (286-327)||(41170771-41170812)
chr4 (142-213)||(18634813-18634884)
chr4 (148-211)||(33777008-33777071)
chr4 (280-327)||(45418065-45418112)
chr4 (148-211)||(46799869-46799932)
chr4 (280-322)||(1987739-1987781)
chr4 (280-322)||(4577560-4577602)
chr4 (141-211)||(36110248-36110318)
chr4 (142-211)||(45678377-45678446)
chr4 (281-322)||(55960703-55960744)
chr4 (280-328)||(5208353-5208401)
chr4 (286-322)||(33914369-33914405)
chr4 (141-189)||(35037718-35037766)
chr4 (288-328)||(37022269-37022309)
chr4 (280-328)||(50291279-50291327)
chr4 (288-327)||(1868916-1868955)
chr4 (287-322)||(4949267-4949302)
chr4 (140-211)||(18944399-18944470)
chr4 (287-322)||(29513729-29513764)
chr4 (280-327)||(29577462-29577509)
chr4 (164-211)||(29863665-29863712)
chr4 (287-322)||(51224871-51224906)
chr4 (280-327)||(54803354-54803401)
chr4 (285-328)||(55609197-55609239)
chr4 (287-322)||(56025259-56025294)
chr4 (280-322)||(3475872-3475914)
chr4 (288-322)||(7795028-7795062)
chr4 (141-211)||(8614296-8614366)
chr4 (288-322)||(9828006-9828040)
chr4 (288-322)||(24310544-24310578)
chr4 (288-322)||(28899238-28899272)
chr4 (280-322)||(30250326-30250368)
chr4 (280-322)||(36110137-36110179)
chr4 (288-322)||(37731929-37731963)
chr4 (280-322)||(38960686-38960728)
chr4 (287-321)||(43983042-43983076)
chr4 (280-322)||(46355319-46355361)
chr4 (141-211)||(50291396-50291466)
chr4 (165-211)||(54801398-54801444)
chr4 (280-322)||(55268027-55268069)
chr4 (281-322)||(1796369-1796410)
chr4 (281-322)||(7037511-7037552)
chr4 (287-324)||(12694461-12694498)
chr4 (141-210)||(32294639-32294708)
chr4 (142-211)||(38960548-38960617)
chr4 (285-322)||(51359821-51359858)
chr4 (280-328)||(3222986-3223034)
chr4 (280-327)||(4877964-4878012)
chr4 (286-322)||(8810574-8810610)
chr4 (146-214)||(19807310-19807378)
chr4 (285-329)||(34995316-34995360)
chr4 (280-328)||(41609705-41609753)
chr4 (286-322)||(43511679-43511715)
chr4 (286-322)||(43864037-43864073)
chr4 (280-328)||(44368228-44368276)
chr4 (288-328)||(46686242-46686281)
chr4 (280-328)||(47519746-47519794)
[»] chr6 (20 HSPs)
chr6 (141-211)||(34976730-34976800)
chr6 (141-204)||(3335345-3335408)
chr6 (280-328)||(3339525-3339573)
chr6 (142-205)||(35050291-35050354)
chr6 (280-322)||(27790261-27790303)
chr6 (280-322)||(34792025-34792067)
chr6 (141-206)||(22422269-22422334)
chr6 (288-328)||(2165323-2165363)
chr6 (288-328)||(2176956-2176996)
chr6 (287-327)||(28965873-28965913)
chr6 (148-211)||(608555-608618)
chr6 (285-328)||(25127864-25127907)
chr6 (287-322)||(25924897-25924932)
chr6 (281-328)||(31934184-31934231)
chr6 (288-322)||(16121166-16121200)
chr6 (141-214)||(17442933-17443006)
chr6 (287-327)||(19789109-19789149)
chr6 (284-328)||(27334855-27334899)
chr6 (284-328)||(27395595-27395639)
chr6 (280-328)||(32729886-32729934)
[»] scaffold0592 (1 HSPs)
scaffold0592 (150-204)||(1031-1085)
[»] scaffold0651 (1 HSPs)
scaffold0651 (280-322)||(4872-4914)
[»] scaffold0014 (2 HSPs)
scaffold0014 (280-322)||(145064-145106)
scaffold0014 (142-211)||(145161-145230)
[»] scaffold0542 (1 HSPs)
scaffold0542 (141-214)||(2952-3025)
[»] scaffold0514 (1 HSPs)
scaffold0514 (281-322)||(1872-1913)
[»] scaffold0286 (1 HSPs)
scaffold0286 (288-328)||(17046-17086)
[»] scaffold0024 (2 HSPs)
scaffold0024 (280-323)||(48656-48699)
scaffold0024 (287-327)||(60467-60507)
[»] scaffold0019 (1 HSPs)
scaffold0019 (281-322)||(72369-72410)
[»] scaffold0085 (1 HSPs)
scaffold0085 (280-324)||(31324-31368)


Alignment Details
Target: chr5 (Bit Score: 131; Significance: 7e-68; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 9 - 139
Target Start/End: Original strand, 12358532 - 12358662
Alignment:
Q  9 agcataggtatactaggagtacgtaatttacagcagatgacacataagagtcaaaataatagtagtaactgaaggaggtagagaacaaccctttaaagga 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12358532 agcataggtatactaggagtacgtaatttacagcagatgacacataagagtcaaaataatagtagtaactgaaggaggtagagaacaaccctttaaagga 12358631  T
Q  109 aacaggctagtttaatagtagtaataagaga 139  Q
    |||||||||||||||||||||||||||||||    
T  12358632 aacaggctagtttaatagtagtaataagaga 12358662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 3518366 - 3518297
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||    
T  3518366 gagtagtgatattttgacaaccattttggtacaacctttgagacaactttgttgttctctcttctcattg 3518297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 10469835 - 10469904
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  10469835 gagtagtgatattttgacaatcattttggtacaatctttgagacaactttgttgttctctcttctcattg 10469904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 35358823 - 35358892
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    |||||||||||||||  |||||||||||||||||  ||||||||||||||||||||||||||||| ||||    
T  35358823 gagtagtgatattttagcaaccattttggtacaacctttgagacaactttgttgttctctcttctcattg 35358892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 31625965 - 31626033
Alignment:
Q  143 agtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    |||||||||||||||||||||||||| |||||| |||| |||||||||| |||||||||||||| ||||    
T  31625965 agtagtgatattttgacaaccattttagtacaacttttaagacaactttattgttctctcttctcattg 31626033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 1108186 - 1108112
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgag----acaactttgttgttctctcttcttattg 211  Q
    |||||||||||||||||||||||||||||||||||  ||||||    ||||||||||||||||||||||| ||||    
T  1108186 agagtagtgatattttgacaaccattttggtacaacctttgagacaaacaactttgttgttctctcttctcattg 1108112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 140 - 201
Target Start/End: Complemental strand, 29766016 - 29765955
Alignment:
Q  140 tagagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctct 201  Q
    ||||||||||||||||||||||| ||||||||||||  ||||||| ||||||||||||||||    
T  29766016 tagagtagtgatattttgacaactattttggtacaacctttgagataactttgttgttctct 29765955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 8761832 - 8761768
Alignment:
Q  140 tagagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctctt 204  Q
    |||| ||||||||| || ||||||||||||||||||  |||||||||||||||||||||||||||    
T  8761832 tagaatagtgatatgttaacaaccattttggtacaacctttgagacaactttgttgttctctctt 8761768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 287 - 347
Target Start/End: Original strand, 18638858 - 18638918
Alignment:
Q  287 aaaagttgtaccaaaatggttgtacaaatatcatttttctttcgataattcatctccaagt 347  Q
    ||||||||||  ||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  18638858 aaaagttgtaataaaatggttgtgcaaatatcatttctctttcgataattcatctccaagt 18638918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 35616689 - 35616758
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||||||||  ||||| ||||||||| || ||||| |||||| ||||||||||||||||||||||    
T  35616689 gagtagtgatatttgaacaactattttggtataaattttgggacaaccttgttgttctctcttcttattg 35616758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 12612906 - 12612974
Alignment:
Q  143 agtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    |||| ||||||||  |||||||||||||||||| ||||| |||||| ||||||||||||||||| ||||    
T  12612906 agtaatgatatttgaacaaccattttggtacaacttttgggacaaccttgttgttctctcttctcattg 12612974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 39032630 - 39032678
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||    
T  39032630 gttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctcttt 39032678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 280 - 327
Target Start/End: Complemental strand, 3031879 - 3031832
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||    
T  3031879 gttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctctt 3031832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 204
Target Start/End: Complemental strand, 5005277 - 5005234
Alignment:
Q  161 accattttggtacaatttttgagacaactttgttgttctctctt 204  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  5005277 accattttggtacaacttttgagacaactttgttgttctctctt 5005234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 280 - 327
Target Start/End: Original strand, 18729315 - 18729362
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||    
T  18729315 gttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctctt 18729362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 280 - 327
Target Start/End: Complemental strand, 29765875 - 29765828
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||    
T  29765875 gttgtacaaaagttgtactaaaatggttgtacaaatatcatttctctt 29765828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 139 - 213
Target Start/End: Complemental strand, 34698961 - 34698888
Alignment:
Q  139 atagagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattgat 213  Q
    |||| ||||||||||||| |||| |||||||||||||  ||||| |||||||||||||| |||||||| ||||||    
T  34698961 atagcgtagtgatattttaacaatcattttggtacaa-ctttgaaacaactttgttgttttctcttctcattgat 34698888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 141 - 211
Target Start/End: Original strand, 37821028 - 37821098
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    |||||||||||||||  ||||| |||||||||||| ||||| |||||| |||||||  |||||||||||||    
T  37821028 agagtagtgatatttgaacaactattttggtacaacttttgggacaaccttgttgtgttctcttcttattg 37821098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 281 - 322
Target Start/End: Original strand, 25585483 - 25585524
Alignment:
Q  281 ttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  25585483 ttgtacaaaagttgtacaaaaatggttgtacaaatatcattt 25585524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 12891122 - 12891170
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    |||||||||||||||| | |||||||||||||||||||||||| |||||    
T  12891122 gttgtacaaaagttgtgcaaaaatggttgtacaaatatcatttctcttt 12891170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 280 - 327
Target Start/End: Original strand, 24330008 - 24330055
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    ||||||||||||||||||||||||  ||||||||||||||||| ||||    
T  24330008 gttgtacaaaagttgtaccaaaataattgtacaaatatcatttctctt 24330055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 327
Target Start/End: Original strand, 14522991 - 14523037
Alignment:
Q  281 ttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    ||||| ||||||||||| |||||||||||||||||||||||| ||||    
T  14522991 ttgtaaaaaagttgtacaaaaatggttgtacaaatatcatttctctt 14523037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 17574111 - 17574176
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttct 206  Q
    |||||| ||||||||  ||||| |||||||||||| ||||| |||||| |||||||||| ||||||    
T  17574111 agagtaatgatatttgaacaactattttggtacaacttttgggacaaccttgttgttctttcttct 17574176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 35924454 - 35924385
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttatt 210  Q
    |||||| ||||||||  |||||  |||||  ||||||||||||||||| ||||||||||||||| |||||    
T  35924454 agagtaatgatatttgtacaactcttttgaaacaatttttgagacaaccttgttgttctctctttttatt 35924385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 39032492 - 39032561
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||||||||  |||||  ||||| ||||||||||| |||||| |||||||  |||||||||||||    
T  39032492 gagtagtgatatttgaacaactcttttgatacaatttttgggacaaccttgttgtgttctcttcttattg 39032561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 8442341 - 8442273
Alignment:
Q  143 agtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    |||| ||||||||  ||||| ||||||||| ||||||||  |||| |||||||||||||||||| ||||    
T  8442341 agtaatgatatttgaacaactattttggtataatttttggaacaattttgttgttctctcttctcattg 8442273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 324
Target Start/End: Complemental strand, 8761686 - 8761646
Alignment:
Q  284 tacaaaagttgtaccaaaatggttgtacaaatatcattttt 324  Q
    ||||||| ||||||||||||| |||||||||||||||||||    
T  8761686 tacaaaaattgtaccaaaatgattgtacaaatatcattttt 8761646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 328
Target Start/End: Complemental strand, 12203195 - 12203155
Alignment:
Q  288 aaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    |||||||||| |||||||||||||||||||||||| |||||    
T  12203195 aaagttgtacaaaaatggttgtacaaatatcatttctcttt 12203155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 31626102 - 31626150
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    ||||||||||| || |||||||||| ||||||||||||||||| |||||    
T  31626102 gttgtacaaaaattataccaaaatgattgtacaaatatcatttctcttt 31626150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 322
Target Start/End: Original strand, 7077375 - 7077410
Alignment:
Q  287 aaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||| |||||||||||||||||||||||||    
T  7077375 aaaagttgtaacaaaatggttgtacaaatatcattt 7077410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 141 - 204
Target Start/End: Complemental strand, 9940238 - 9940175
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctctt 204  Q
    |||||| ||||||||  | ||| |||||| ||||||||||  ||||||||||||||||||||||    
T  9940238 agagtaatgatatttgaataactattttgatacaatttttaggacaactttgttgttctctctt 9940175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 321
Target Start/End: Complemental strand, 12612944 - 12612909
Alignment:
Q  286 caaaagttgtaccaaaatggttgtacaaatatcatt 321  Q
    |||||||||||||||||||||||| |||||||||||    
T  12612944 caaaagttgtaccaaaatggttgttcaaatatcatt 12612909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 327
Target Start/End: Complemental strand, 14914417 - 14914370
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    ||||| ||||||||||  ||||||||||||||||||||||||| ||||    
T  14914417 gttgtccaaaagttgtcacaaaatggttgtacaaatatcatttctctt 14914370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 327
Target Start/End: Original strand, 20985555 - 20985602
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    ||||||||||| || ||| |||||||||||||||||||||||| ||||    
T  20985555 gttgtacaaaaattatacaaaaatggttgtacaaatatcatttctctt 20985602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 43152954 - 43153017
Alignment:
Q  148 tgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||  ||||| |||||||||||| | ||  |||||||||||||||||||||||| ||||    
T  43152954 tgatatttgaacaactattttggtacaactcttaggacaactttgttgttctctcttctcattg 43153017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 1108026 - 1107984
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||||||||| |||||| || |||||||||||||||    
T  1108026 gttgtacaaaagttgtaacaaaatagtcgtacaaatatcattt 1107984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 9594523 - 9594481
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||||||||  |||| ||||||||||||||||||||    
T  9594523 gttgtacaaaagttgtcacaaattggttgtacaaatatcattt 9594481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 9599754 - 9599796
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||||||||  |||| ||||||||||||||||||||    
T  9599754 gttgtacaaaagttgtcacaaattggttgtacaaatatcattt 9599796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 210
Target Start/End: Original strand, 22864273 - 22864335
Alignment:
Q  148 tgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttatt 210  Q
    ||||||||  ||||| |||||| || |||||||| |||||| ||||||||||||||| |||||    
T  22864273 tgatatttgaacaactattttgttataatttttgggacaacgttgttgttctctctttttatt 22864335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 28501637 - 28501595
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||| ||||  |||||||||||||||||||||||||    
T  28501637 gttgtacaaaaattgtcacaaaatggttgtacaaatatcattt 28501595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 30574403 - 30574445
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||||||||  |||| ||||||||||||||||||||    
T  30574403 gttgtacaaaagttgtcacaaattggttgtacaaatatcattt 30574445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 37821151 - 37821193
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||||||||  ||||||||||||| ||||||||||    
T  37821151 gttgtacaaaagttgtataaaaatggttgtacgaatatcattt 37821193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 322
Target Start/End: Complemental strand, 38387647 - 38387613
Alignment:
Q  288 aaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||| ||||||||||||||||||||||||    
T  38387647 aaagttgtacaaaaatggttgtacaaatatcattt 38387613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 322
Target Start/End: Original strand, 3263535 - 3263576
Alignment:
Q  281 ttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||||||  |||| ||||||||||||||||||||    
T  3263535 ttgtacaaaagttgtcacaaattggttgtacaaatatcattt 3263576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 324
Target Start/End: Complemental strand, 5005148 - 5005103
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatgg-ttgtacaaatatcattttt 324  Q
    |||||||||| ||||||||||||||| |||| ||||||||||||||    
T  5005148 gttgtacaaatgttgtaccaaaatggtttgtgcaaatatcattttt 5005103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 322
Target Start/End: Complemental strand, 18695358 - 18695321
Alignment:
Q  285 acaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||  |||||||||||||||||||||||||    
T  18695358 acaaaagttgttacaaaatggttgtacaaatatcattt 18695321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 325
Target Start/End: Original strand, 11464149 - 11464193
Alignment:
Q  281 ttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttc 325  Q
    ||||||||||||| |  |||| |||||||||||||||||||||||    
T  11464149 ttgtacaaaagttatcacaaattggttgtacaaatatcatttttc 11464193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 329
Target Start/End: Complemental strand, 32639082 - 32639039
Alignment:
Q  285 acaaaagttgtaccaaaatggttgtacaaatatcatttttctttc 329  Q
    |||||| |||||| |||||| ||||||||||||||||||||||||    
T  32639082 acaaaatttgtac-aaaatgattgtacaaatatcatttttctttc 32639039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 328
Target Start/End: Complemental strand, 38919900 - 38919860
Alignment:
Q  288 aaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    |||||||||| ||||| |||||||||||||||||| |||||    
T  38919900 aaagttgtacaaaaatagttgtacaaatatcatttctcttt 38919860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 38920028 - 38919960
Alignment:
Q  143 agtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||| |||||||  |||||  ||||||||||| ||||  |||||| ||||||||||||||||| ||||    
T  38920028 agtagagatatttgaacaactcttttggtacaacttttaggacaaccttgttgttctctcttctcattg 38919960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 2e-28; HSPs: 77)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 37741837 - 37741909
Alignment:
Q  139 atagagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  37741837 atagagtagtgatattttgacaaccattttgatacaatttttgagacaactttgttgttctctcttctcattg 37741909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 141 - 211
Target Start/End: Original strand, 31666093 - 31666163
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  31666093 agagtagtaatattttgacaaccattttggtacaatctttgagacaactttgttgttctctcttctcattg 31666163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 142 - 206
Target Start/End: Complemental strand, 27787672 - 27787608
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttct 206  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  27787672 gagtagtgatagtttgacaaccattttggtacaacttttgagacaactttgttgttctctcttct 27787608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 141 - 204
Target Start/End: Complemental strand, 43757770 - 43757707
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctctt 204  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  43757770 agagtagtgatattttgacaactattttggtataatttttgagacaactttgttgttctctctt 43757707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 140 - 206
Target Start/End: Complemental strand, 644881 - 644815
Alignment:
Q  140 tagagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttct 206  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||    
T  644881 tagagtagtgatattttgacaaccattttggtacaacatttgagacaactttattgttctctcttct 644815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 46903654 - 46903584
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||| ||||    
T  46903654 agagtagtgatattttaacaaccattttggtacaacctttgagacaactttgttgttctctcttctcattg 46903584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 2827598 - 2827667
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||||||||||| ||||||||||||||||  |||||||||| |||||||||||||||||||||||    
T  2827598 gagtagtgatattttgataaccattttggtacaacctttgagacaattttgttgttctctcttcttattg 2827667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 49615163 - 49615232
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||| ||||    
T  49615163 gagtagtgatattttgacaaccattttggtacaatctttgagacaactttattgttctcttttctcattg 49615232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 141 - 204
Target Start/End: Complemental strand, 40053090 - 40053027
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctctt 204  Q
    |||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||    
T  40053090 agagtagtgatattttaacaactattttggtacaatctttgagacaactttgttgttctctctt 40053027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 24158834 - 24158764
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||||||||||||||||||||| || ||||  |||||||||||||||||||||| |||||||||||    
T  24158834 agagtagtgatattttgacaaccatttaggaacaacctttgagacaactttgttgttctgtcttcttattg 24158764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 6396510 - 6396441
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    |||||||||| ||||||||| |||||||||||||  ||||||||||||||||||||||||||||| ||||    
T  6396510 gagtagtgatgttttgacaatcattttggtacaacatttgagacaactttgttgttctctcttctcattg 6396441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 21446106 - 21446175
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||||||||||| ||||||||||||||||  |||||||||||||||||| |||||||||| ||||    
T  21446106 gagtagtgatattttgataaccattttggtacaacctttgagacaactttgttgatctctcttctcattg 21446175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 280 - 327
Target Start/End: Original strand, 48336464 - 48336511
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  48336464 gttgtacaaaagttgtatcaaaatggttgtacaaatatcatttttctt 48336511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 28457237 - 28457294
Alignment:
Q  144 gtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctct 201  Q
    ||||||||||||| ||||||||||||||||||  |||||||||||||| |||||||||    
T  28457237 gtagtgatattttaacaaccattttggtacaacctttgagacaactttattgttctct 28457294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 23399874 - 23399946
Alignment:
Q  139 atagagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    |||||||||||||||||  |||||  ||||||||||||||||| |||||| |||||||  |||||||||||||    
T  23399874 atagagtagtgatatttaaacaactcttttggtacaatttttgggacaaccttgttgtgttctcttcttattg 23399946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 206
Target Start/End: Complemental strand, 8312331 - 8312264
Alignment:
Q  139 atagagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttct 206  Q
    ||||||||||||||||||||||||||||||| || ||  | |||||||||||||||||| ||| ||||    
T  8312331 atagagtagtgatattttgacaaccattttgatataacctctgagacaactttgttgttttctattct 8312264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 6396372 - 6396330
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  6396372 gttgtacaaaagttgtaccaaaatggttgtaccaatatcattt 6396330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 141 - 211
Target Start/End: Original strand, 41564767 - 41564837
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    |||||||||||||||  |||||  ||||||||||||||||| |||||| |||||||  |||||||||||||    
T  41564767 agagtagtgatatttgaacaactcttttggtacaatttttgggacaaccttgttgtgttctcttcttattg 41564837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 41564906 - 41564948
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  41564906 gttgtacaaaagttgtacaaaaatggttgtacaaatatcattt 41564948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 29638898 - 29638829
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||||||||  |||||  ||||||||||||||||| ||||| ||||||||  |||||||||||||    
T  29638898 gagtagtgatatttgaacaactcttttggtacaatttttgggacaattttgttgtgttctcttcttattg 29638829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 2257727 - 2257767
Alignment:
Q  287 aaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  2257727 aaaagttgtagcaaaatggttgtacaaatatcatttttctt 2257767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 280 - 316
Target Start/End: Complemental strand, 11897219 - 11897183
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaata 316  Q
    |||||||||||||||||||||||||||||||||||||    
T  11897219 gttgtacaaaagttgtaccaaaatggttgtacaaata 11897183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 44714426 - 44714355
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttg--ttgttctctcttcttattg 211  Q
    ||||||| ||||||| |||| |||||||||||||  |||||||||||||||  |||||||||||| ||||||    
T  44714426 gagtagtaatattttaacaatcattttggtacaacctttgagacaactttgttttgttctctctttttattg 44714355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 280 - 327
Target Start/End: Complemental strand, 1100262 - 1100215
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    ||||||||||| |||||| |||||||||||||||||||||||| ||||    
T  1100262 gttgtacaaaaattgtacaaaaatggttgtacaaatatcatttctctt 1100215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 199
Target Start/End: Complemental strand, 21263204 - 21263149
Alignment:
Q  144 gtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttct 199  Q
    ||||||||||||  ||||| ||||| ||||||||||||||||||| ||||||||||    
T  21263204 gtagtgatatttgaacaactatttttgtacaatttttgagacaaccttgttgttct 21263149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 280 - 327
Target Start/End: Original strand, 21854490 - 21854537
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    ||||||||||||||||||||||||  ||||||||||||||||| ||||    
T  21854490 gttgtacaaaagttgtaccaaaataattgtacaaatatcatttctctt 21854537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 280 - 327
Target Start/End: Complemental strand, 24158695 - 24158648
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    |||||| |||||||||||| ||||||||||||||||||||||| ||||    
T  24158695 gttgtataaaagttgtaccgaaatggttgtacaaatatcatttctctt 24158648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 43105266 - 43105219
Alignment:
Q  164 attttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    |||||||||||||||||| ||||||||| |||||||||||| ||||||    
T  43105266 attttggtacaatttttgggacaactttattgttctctctttttattg 43105219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 48962171 - 48962100
Alignment:
Q  140 tagagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||| ||||||||  |||||  ||||||||||||||||| |||||| |||||||  |||||||||||||    
T  48962171 tagagtattgatatttgaacaactcttttggtacaatttttgggacaaccttgttgtgttctcttcttattg 48962100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 5574285 - 5574327
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||||||||| |||||| |||||||||||||||||    
T  5574285 gttgtacaaaagttgtacaaaaatgattgtacaaatatcattt 5574327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 8577528 - 8577570
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||||| ||| ||||||||||||||||||||||||    
T  8577528 gttgtacaaaagttatacaaaaatggttgtacaaatatcattt 8577570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 12990495 - 12990537
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||| |||||||||| ||||||||||||||||||||||||    
T  12990495 gttgtacgaaagttgtacaaaaatggttgtacaaatatcattt 12990537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 28457373 - 28457415
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||| |||||||||||||||||| |||||||||||||||||    
T  28457373 gttgtataaaagttgtaccaaaatgattgtacaaatatcattt 28457415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 41425287 - 41425245
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||| |||||||||||||||| ||||||||||||||||||    
T  41425287 gttgtacgaaagttgtaccaaaatagttgtacaaatatcattt 41425245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 329
Target Start/End: Original strand, 49189241 - 49189283
Alignment:
Q  287 aaaagttgtaccaaaatggttgtacaaatatcatttttctttc 329  Q
    |||||||||| ||||||||||||||||||||||||| ||||||    
T  49189241 aaaagttgtagcaaaatggttgtacaaatatcatttctctttc 49189283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 280 - 329
Target Start/End: Complemental strand, 578849 - 578800
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctttc 329  Q
    ||||| |||||||||||||||||||||| |||||||||| ||| ||||||    
T  578849 gttgtccaaaagttgtaccaaaatggttatacaaatatcctttctctttc 578800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 281 - 322
Target Start/End: Original strand, 23400016 - 23400057
Alignment:
Q  281 ttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||||||||  ||||||||||||||||||||||||    
T  23400016 ttgtacaaaagttgtataaaaatggttgtacaaatatcattt 23400057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 320
Target Start/End: Complemental strand, 49314401 - 49314368
Alignment:
Q  287 aaaagttgtaccaaaatggttgtacaaatatcat 320  Q
    ||||||||||||||||||||||||||||||||||    
T  49314401 aaaagttgtaccaaaatggttgtacaaatatcat 49314368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 328
Target Start/End: Complemental strand, 11038307 - 11038259
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    ||||||||||| || |||||||||||||||| ||||||||||| |||||    
T  11038307 gttgtacaaaaattataccaaaatggttgtataaatatcatttctcttt 11038259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 322
Target Start/End: Complemental strand, 22331405 - 22331369
Alignment:
Q  286 caaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||| |||||||||||||||||||||||||||||||    
T  22331405 caaaaattgtaccaaaatggttgtacaaatatcattt 22331369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 26910470 - 26910430
Alignment:
Q  287 aaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    ||||||||| |||||||||||||||||||||||||| ||||    
T  26910470 aaaagttgtgccaaaatggttgtacaaatatcatttctctt 26910430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 328
Target Start/End: Complemental strand, 42256505 - 42256457
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    ||||||| ||||||||  ||||||||||||||||||||||||| |||||    
T  42256505 gttgtaccaaagttgtcacaaaatggttgtacaaatatcatttctcttt 42256457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 327
Target Start/End: Complemental strand, 835916 - 835869
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||| ||||    
T  835916 gttgtacaaaaattgtaacaaaatgattgtacaaatatcatttatctt 835869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 327
Target Start/End: Complemental strand, 10385464 - 10385425
Alignment:
Q  288 aaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  10385464 aaagttgtagcaaaatggttgtacaaatatcatttctctt 10385425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 140 - 175
Target Start/End: Complemental strand, 11038441 - 11038406
Alignment:
Q  140 tagagtagtgatattttgacaaccattttggtacaa 175  Q
    ||||||||||||||||| ||||||||||||||||||    
T  11038441 tagagtagtgatattttaacaaccattttggtacaa 11038406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 148 - 211
Target Start/End: Complemental strand, 19920939 - 19920876
Alignment:
Q  148 tgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||||||| ||||||  | |||| ||| | |||||||||||| ||||||||||||||||    
T  19920939 tgatattttgacatccatttaaggacaactttggtgacaactttgtttttctctcttcttattg 19920876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 319
Target Start/End: Complemental strand, 26760607 - 26760568
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatca 319  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  26760607 gttgtacaaaaattgtacaaaaatggttgtacaaatatca 26760568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 322
Target Start/End: Complemental strand, 27787531 - 27787492
Alignment:
Q  283 gtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||||||||||| |||||||| |||||||||||    
T  27787531 gtacaaaagttgtaccaaattggttgtataaatatcattt 27787492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 37947114 - 37947177
Alignment:
Q  148 tgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||  ||||| |||||| ||||| ||||| |||||| ||||||||||||||||| ||||    
T  37947114 tgatatttgaacaactattttgttacaacttttgggacaaccttgttgttctctcttctcattg 37947177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 327
Target Start/End: Complemental strand, 39815391 - 39815344
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    ||||| ||||||||||| |||||||||||||||||||| |||| ||||    
T  39815391 gttgtccaaaagttgtagcaaaatggttgtacaaatataatttctctt 39815344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 327
Target Start/End: Complemental strand, 46903518 - 46903479
Alignment:
Q  288 aaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  46903518 aaagttgtatcaaaatggttgtacaaatatcatttctctt 46903479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 51436342 - 51436388
Alignment:
Q  164 attttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||||| |||| |||||||||||||||||||||||||| ||||    
T  51436342 attttggtacactttt-gagacaactttgttgttctctcttctcattg 51436388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 12999848 - 12999890
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||||||||   ||||||||||||||||||||||||    
T  12999848 gttgtacaaaagttgttagaaaatggttgtacaaatatcattt 12999890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 322
Target Start/End: Original strand, 16252782 - 16252816
Alignment:
Q  288 aaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||| ||||||||||||||||||||||||    
T  16252782 aaagttgtacaaaaatggttgtacaaatatcattt 16252816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 322
Target Start/End: Complemental strand, 19427558 - 19427524
Alignment:
Q  288 aaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||||||||||||||| |||||||||||    
T  19427558 aaagttgtaccaaaatggttgtataaatatcattt 19427524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 327
Target Start/End: Original strand, 21433432 - 21433474
Alignment:
Q  285 acaaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    |||||||||||  ||||||||||||||||||||||||| ||||    
T  21433432 acaaaagttgttacaaaatggttgtacaaatatcatttctctt 21433474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 22674757 - 22674715
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||| |||||| ||||| ||||||||||||||||||    
T  22674757 gttgtacaaaaattgtacaaaaatagttgtacaaatatcattt 22674715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 326
Target Start/End: Complemental strand, 25130748 - 25130702
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttct 326  Q
    ||||||||||||||||  |||| || |||||||||||||||||||||    
T  25130748 gttgtacaaaagttgtcacaaattgattgtacaaatatcatttttct 25130702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 27954412 - 27954342
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    |||||||||||||||  ||||   |||| | ||||||||||  ||||||||||||||||||||||| ||||    
T  27954412 agagtagtgatatttgaacaattcttttagcacaatttttggaacaactttgttgttctctcttctcattg 27954342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 322
Target Start/End: Complemental strand, 30596760 - 30596726
Alignment:
Q  288 aaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||||||||||||||||| |||||||||    
T  30596760 aaagttgtaccaaaatggttgtacatatatcattt 30596726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 35972830 - 35972872
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||||||||  ||||||||||| |||||||||||||    
T  35972830 gttgtacaaaagttgtcacaaaatggttgaacaaatatcattt 35972872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 322
Target Start/End: Complemental strand, 43757636 - 43757602
Alignment:
Q  288 aaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||| |||||||||||||||||||||||||    
T  43757636 aaagttgtatcaaaatggttgtacaaatatcattt 43757602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 50035563 - 50035605
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||| |||||||||  |||||||||||||||||||||||||    
T  50035563 gttgtataaaagttgtcacaaaatggttgtacaaatatcattt 50035605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 322
Target Start/End: Original strand, 50460735 - 50460769
Alignment:
Q  288 aaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||| ||||||||||||||||||||||||    
T  50460735 aaagttgtacaaaaatggttgtacaaatatcattt 50460769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 329
Target Start/End: Complemental strand, 27352675 - 27352626
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctttc 329  Q
    ||||| |||||||| |  ||||||||||||||||||||||||| ||||||    
T  27352675 gttgtccaaaagttatcacaaaatggttgtacaaatatcatttctctttc 27352626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 49615303 - 49615349
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    ||||||||||| |||||||||  |||||||||||||||||||| |||||    
T  49615303 gttgtacaaaaattgtaccaa--tggttgtacaaatatcatttctcttt 49615349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 321
Target Start/End: Complemental strand, 2492453 - 2492417
Alignment:
Q  285 acaaaagttgtaccaaaatggttgtacaaatatcatt 321  Q
    ||||||||||||  |||||||||||||||||||||||    
T  2492453 acaaaagttgtaataaaatggttgtacaaatatcatt 2492417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 328
Target Start/End: Complemental strand, 9011682 - 9011642
Alignment:
Q  288 aaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    ||||||||  ||||||||||||||||||||||||| |||||    
T  9011682 aaagttgtcacaaaatggttgtacaaatatcatttctcttt 9011642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 201
Target Start/End: Complemental strand, 11796488 - 11796428
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctct 201  Q
    |||||| ||||||||||||||| |||||  |||||| ||| ||| | ||||||||||||||    
T  11796488 agagtattgatattttgacaactatttttatacaatctttaagatagctttgttgttctct 11796428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 328
Target Start/End: Original strand, 16234324 - 16234368
Alignment:
Q  284 tacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    ||||||||||||   ||||||| ||||||||||||||||||||||    
T  16234324 tacaaaagttgtcataaaatggatgtacaaatatcatttttcttt 16234368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 328
Target Start/End: Complemental strand, 18610818 - 18610770
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    |||||| |||||||||  |||||| |||||||||||||||||| |||||    
T  18610818 gttgtaaaaaagttgtcacaaaatagttgtacaaatatcatttctcttt 18610770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 327
Target Start/End: Complemental strand, 30414909 - 30414873
Alignment:
Q  291 gttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  30414909 gttgtacaaaaatggttgtacaaatatcatttctctt 30414873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 328
Target Start/End: Original strand, 40596077 - 40596117
Alignment:
Q  288 aaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    ||||||||  ||||||||||||||||||||||||| |||||    
T  40596077 aaagttgtcacaaaatggttgtacaaatatcatttctcttt 40596117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 43196122 - 43196162
Alignment:
Q  287 aaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    |||||||||| |||||||| |||||||||||||||| ||||    
T  43196122 aaaagttgtagcaaaatggatgtacaaatatcatttctctt 43196162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 48028711 - 48028640
Alignment:
Q  139 atagagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    |||||||| ||||||||  ||||  |||||| | |||||||||  ||||||||||||||||||||||| ||||    
T  48028711 atagagtaatgatatttgaacaattattttgat-caatttttggtacaactttgttgttctctcttctcattg 48028640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 313
Target Start/End: Original strand, 48390104 - 48390136
Alignment:
Q  281 ttgtacaaaagttgtaccaaaatggttgtacaa 313  Q
    ||||||||||||||||| |||||||||||||||    
T  48390104 ttgtacaaaagttgtacaaaaatggttgtacaa 48390136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 322
Target Start/End: Original strand, 48634483 - 48634519
Alignment:
Q  286 caaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  48634483 caaaatttgtcccaaaatggttgtacaaatatcattt 48634519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 3e-27; HSPs: 86)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 2280361 - 2280291
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  2280361 agagtagtgatattttgacaaccattttggtacaatctttgagacaactttgttgttctctcttctcattg 2280291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 16295647 - 16295578
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||    
T  16295647 gagtagtgatattttgacaactattttggtacaacttttgagacaactttgttgttctctctttttattg 16295578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 29533943 - 29533875
Alignment:
Q  143 agtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  29533943 agtagtgatattttgacaatcattttggtacaacttttgagacaactttgttgttctctcttctcattg 29533875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 135 - 211
Target Start/End: Original strand, 50025566 - 50025642
Alignment:
Q  135 agagatagagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    |||||||||||| ||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||| ||||    
T  50025566 agagatagagtaatgatattttcacaaccattttggtacaacctttgagacaactttgttgttctctcttctcattg 50025642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 38471827 - 38471756
Alignment:
Q  140 tagagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  38471827 tagagtagtgatattttgacaattattttggtacaatctttgagacaactttgttgttctctcttctcattg 38471756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 14847403 - 14847475
Alignment:
Q  139 atagagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    |||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||| |||||| ||||    
T  14847403 atagagtagtgatattttgacaaccattttggtacaaccttttagacaactttgttgttctatcttctcattg 14847475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 1261263 - 1261332
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    |||||||||||||||||||||||| ||| |||||||||| |||||||||||||||| |||||||| ||||    
T  1261263 gagtagtgatattttgacaaccatgttgatacaattttttagacaactttgttgttttctcttctcattg 1261332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 9557820 - 9557889
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||||||||||||||  |||||||||||| ||||||||||| |||||||||||||||||| ||||    
T  9557820 gagtagtgatattttgacaattattttggtacaacttttgagacaattttgttgttctctcttctcattg 9557889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 42643421 - 42643356
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttct 206  Q
    |||| |||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||    
T  42643421 agagcagtgatattttgacaaccattttgatataatttttgagacaattttgttgttctctcttct 42643356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 34208450 - 34208379
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattgat 213  Q
    ||||||||||||||||||||  |||||  |||||||||||||||||||||||| ||||||||||| ||||||    
T  34208450 gagtagtgatattttgacaattattttaatacaatttttgagacaactttgtttttctctcttctcattgat 34208379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 145 - 214
Target Start/End: Complemental strand, 884717 - 884648
Alignment:
Q  145 tagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattgatc 214  Q
    |||||||||||| ||||| ||||||||| ||||||||||| || ||||||||| ||||||||||||||||    
T  884717 tagtgatattttaacaactattttggtataatttttgagagaattttgttgttttctcttcttattgatc 884648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 33972066 - 33971997
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||| ||||||||  ||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  33972066 gagtaatgatatttgaacaactattttggtacaatttttgagacaaccttgttgttctctcttctcattg 33971997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 148 - 201
Target Start/End: Original strand, 47140569 - 47140622
Alignment:
Q  148 tgatattttgacaaccattttggtacaatttttgagacaactttgttgttctct 201  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  47140569 tgatattttgagaaccattttggtacaacttttgagacaactttgttgttctct 47140622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 33075054 - 33074987
Alignment:
Q  144 gtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||||||||||||| ||||| ||||||  |||||||||||||||||||||||| || ||||||    
T  33075054 gtagtgatattttgacaactattttagtacaacctttgagacaactttgttgttctctttttttattg 33074987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 281 - 322
Target Start/End: Complemental strand, 38471686 - 38471645
Alignment:
Q  281 ttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  38471686 ttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 38471645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 281 - 325
Target Start/End: Complemental strand, 17118441 - 17118397
Alignment:
Q  281 ttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttc 325  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  17118441 ttgtacaaaagttgtacaaaaatggttgtacaaatatcatttttc 17118397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 27276918 - 27276846
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattgat 213  Q
    |||||| ||||||||  ||||| ||||||||||||||||||||||||| |||||||| ||| || ||||||||    
T  27276918 agagtaatgatatttgaacaactattttggtacaatttttgagacaaccttgttgttttctttttttattgat 27276846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 31763992 - 31763928
Alignment:
Q  140 tagagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctctt 204  Q
    ||||||| ||||||||  ||||| |||||||||||||||||| ||||| ||||||||||||||||    
T  31763992 tagagtaatgatatttaaacaactattttggtacaatttttgggacaattttgttgttctctctt 31763928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 211
Target Start/End: Original strand, 36301097 - 36301165
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||||||||||||||| |||||||||  ||  ||||||| ||||||||||||||||||||| ||||    
T  36301097 agagtagtgatattttgacaatcattttggt--aacatttgagataactttgttgttctctcttctcattg 36301165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 2280222 - 2280180
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  2280222 gttgtacaaaagttgtactaaaatggttgtacaaatatcattt 2280180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 9027797 - 9027727
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    |||||| ||||||||  ||||| |||||||||||| |||||  ||||| ||||||||||||||||||||||    
T  9027797 agagtaatgatatttgaacaactattttggtacaacttttggtacaaccttgttgttctctcttcttattg 9027727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 14839071 - 14839113
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  14839071 gttgtacaaaagttgtacaaaaatggttgtacaaatatcattt 14839113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 44689837 - 44689795
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  44689837 gttgtacaaaagttgtacaaaaatggttgtacaaatatcattt 44689795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 43149231 - 43149300
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||| ||||||||  ||||| |||||||||||| |||||  ||||| ||||||||||||||||||||||    
T  43149231 gagtaatgatatttgaacaactattttggtacaacttttggtacaaccttgttgttctctcttcttattg 43149300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 141 - 189
Target Start/End: Complemental strand, 52383183 - 52383135
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaact 189  Q
    |||||||||||||||||||||| ||||||||||||| ||||||| ||||    
T  52383183 agagtagtgatattttgacaactattttggtacaatctttgagataact 52383135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 328
Target Start/End: Original strand, 9159063 - 9159110
Alignment:
Q  281 ttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    |||||||||| |||||| |||||||||||||||||||||||| |||||    
T  9159063 ttgtacaaaaattgtacaaaaatggttgtacaaatatcatttctcttt 9159110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 10565236 - 10565166
Alignment:
Q  140 tagagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||| ||||||||||| |||||||||||||||| |  |||||||||||||| ||||||||| || ||||||    
T  10565236 tagagcagtgatattttaacaaccattttggtac-acctttgagacaactttattgttctctatttttattg 10565166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 280 - 327
Target Start/End: Original strand, 50025724 - 50025771
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    ||||||||||| || |||||||||||||||||||||||||||| ||||    
T  50025724 gttgtacaaaatttataccaaaatggttgtacaaatatcatttctctt 50025771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 11327153 - 11327111
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||||||||  |||||||||||||||||||||||||    
T  11327153 gttgtacaaaagttgtcacaaaatggttgtacaaatatcattt 11327111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 211
Target Start/End: Original strand, 14838932 - 14839002
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    |||||||||||||||  |||||  ||||||||||||||||| |||||| |||||||  |||||| ||||||    
T  14838932 agagtagtgatatttgaacaactcttttggtacaatttttgggacaaccttgttgtgttctctttttattg 14839002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 322
Target Start/End: Original strand, 14847548 - 14847586
Alignment:
Q  284 tacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  14847548 tacaaaagttgtaccaaaatggttgcacaaatatcattt 14847586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 16295509 - 16295467
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||||||||| |||| ||||||||||||||||||||    
T  16295509 gttgtacaaaagttgtatcaaattggttgtacaaatatcattt 16295467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 322
Target Start/End: Complemental strand, 25595981 - 25595943
Alignment:
Q  284 tacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  25595981 tacaaaagttgtaccaaaatagttgtacaaatatcattt 25595943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 30664548 - 30664506
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||||||||| |||||| |||||||||||||||||    
T  30664548 gttgtacaaaagttgtacaaaaatgattgtacaaatatcattt 30664506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 334
Target Start/End: Original strand, 36301234 - 36301288
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctttcgataa 334  Q
    |||||||||||||||||| |||||| | |||||||||| |||| |||||||||||    
T  36301234 gttgtacaaaagttgtacaaaaatgatcgtacaaatataatttctctttcgataa 36301288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 42643280 - 42643238
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||||||| ||||| ||||||||||||||||||||    
T  42643280 gttgtacaaaagttgttccaaattggttgtacaaatatcattt 42643238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 47141626 - 47141668
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||| || ||||||||||||||||||||||||||||    
T  47141626 gttgtacaaaaattataccaaaatggttgtacaaatatcattt 47141668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 322
Target Start/End: Complemental strand, 52381223 - 52381185
Alignment:
Q  284 tacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  52381223 tacaaaagttataccaaaatggttgtacaaatatcattt 52381185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 54233494 - 54233536
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||||||||  ||||||||||||||||||||||||    
T  54233494 gttgtacaaaagttgtaaaaaaatggttgtacaaatatcattt 54233536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 322
Target Start/End: Original strand, 3210667 - 3210704
Alignment:
Q  285 acaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||||||||||||||||||||| |||||||    
T  3210667 acaaaagttgtaccaaaatggttgtacaaaaatcattt 3210704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 146 - 211
Target Start/End: Complemental strand, 32152072 - 32152007
Alignment:
Q  146 agtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||||  |||||  ||||||||||||||||  ||||||||||||||  |||||||||||||    
T  32152072 agtgatatttgaacaacttttttggtacaatttttaggacaactttgttgtgttctcttcttattg 32152007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 281 - 322
Target Start/End: Original strand, 38296689 - 38296730
Alignment:
Q  281 ttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||||||||| ||||||||||||||||||| ||||    
T  38296689 ttgtacaaaagttgtactaaaatggttgtacaaatattattt 38296730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 281 - 322
Target Start/End: Original strand, 42888799 - 42888840
Alignment:
Q  281 ttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||||||||| ||||||| ||||||||||||||||    
T  42888799 ttgtacaaaagttgtacaaaaatggctgtacaaatatcattt 42888840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 328
Target Start/End: Complemental strand, 8254072 - 8254024
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    ||||||| ||||||||  ||||||||||||||||||||||||| |||||    
T  8254072 gttgtaccaaagttgtcacaaaatggttgtacaaatatcatttctcttt 8254024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 328
Target Start/End: Complemental strand, 9027658 - 9027610
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    |||||||||||||||||  |||||||||||||||||| ||||| |||||    
T  9027658 gttgtacaaaagttgtataaaaatggttgtacaaataacatttctcttt 9027610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 214
Target Start/End: Complemental strand, 25559883 - 25559815
Alignment:
Q  146 agtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattgatc 214  Q
    ||||||||||| | || ||||||| |||||  |||||||||| ||| |||||||||||||| |||||||    
T  25559883 agtgatattttaagaatcattttgatacaacctttgagacaattttattgttctctcttctcattgatc 25559815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 210
Target Start/End: Original strand, 29555729 - 29555797
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttatt 210  Q
    ||||||||||||||  |||||  ||||||||||| ||||| |||||| |||||||  ||||||||||||    
T  29555729 gagtagtgatatttgaacaactcttttggtacaacttttgggacaaccttgttgtgttctcttcttatt 29555797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 29555864 - 29555912
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    |||||||||||||| ||| ||||||||||||||||||| |||| |||||    
T  29555864 gttgtacaaaagttatacaaaaatggttgtacaaatattatttctcttt 29555912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 33971927 - 33971879
Alignment:
Q  281 ttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctttc 329  Q
    ||||||||||||||||| | |||||||||| ||||||||||| ||||||    
T  33971927 ttgtacaaaagttgtacaagaatggttgtataaatatcatttctctttc 33971879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 328
Target Start/End: Complemental strand, 36819001 - 36818953
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    ||||||||||||||||  |||| |||||||||||||||||||| |||||    
T  36819001 gttgtacaaaagttgtcacaaattggttgtacaaatatcatttctcttt 36818953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 40478320 - 40478356
Alignment:
Q  287 aaaagttgtaccaaaatggttgtacaaatatcatttt 323  Q
    |||||||||| ||||||||||||||||||||||||||    
T  40478320 aaaagttgtagcaaaatggttgtacaaatatcatttt 40478356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 322
Target Start/End: Complemental strand, 7949829 - 7949794
Alignment:
Q  287 aaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||| |||||||||||||||||||||||||    
T  7949829 aaaagttgtagcaaaatggttgtacaaatatcattt 7949794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 328
Target Start/End: Complemental strand, 16479671 - 16479629
Alignment:
Q  285 acaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    ||||||||||||| |||||||||||||||||||||||| |||||    
T  16479671 acaaaagttgtac-aaaatggttgtacaaatatcatttctcttt 16479629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 327
Target Start/End: Original strand, 29846914 - 29846953
Alignment:
Q  288 aaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  29846914 aaagttgtacaaaaatggttgtacaaatatcatttctctt 29846953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 322
Target Start/End: Complemental strand, 41877726 - 41877691
Alignment:
Q  287 aaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||| |||||||||||||||||||||||||    
T  41877726 aaaagttgtagcaaaatggttgtacaaatatcattt 41877691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 148 - 211
Target Start/End: Complemental strand, 43900949 - 43900886
Alignment:
Q  148 tgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||||||| ||||||  | |||| ||| | |||||||||||| ||||||||||||||||    
T  43900949 tgatattttgacatccatttaaggacaactttagtgacaactttgtttttctctcttcttattg 43900886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 327
Target Start/End: Original strand, 45517687 - 45517730
Alignment:
Q  284 tacaaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    |||||||||| ||| |||||||||||||||||||||||| ||||    
T  45517687 tacaaaagttatacaaaaatggttgtacaaatatcatttctctt 45517730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 47683975 - 47683904
Alignment:
Q  140 tagagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||| ||||||||  ||||||||||||  |||| |||||||||||| || |  ||||||||||||||||    
T  47683975 tagagtaatgatatttgtacaaccattttgtgacaacttttgagacaaccttctctttctctcttcttattg 47683904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 327
Target Start/End: Complemental strand, 48405451 - 48405408
Alignment:
Q  284 tacaaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    ||||||||||||  ||||||||||||||||||||||||| ||||    
T  48405451 tacaaaagttgtcacaaaatggttgtacaaatatcatttctctt 48405408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 25559749 - 25559707
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||| |||| || ||||||||||||||||||||||||||||    
T  25559749 gttgtataaaaattataccaaaatggttgtacaaatatcattt 25559707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 175
Target Start/End: Original strand, 26548671 - 26548709
Alignment:
Q  137 agatagagtagtgatattttgacaaccattttggtacaa 175  Q
    |||||||||||||||| |||||||| |||||||||||||    
T  26548671 agatagagtagtgataatttgacaatcattttggtacaa 26548709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 322
Target Start/End: Complemental strand, 29057696 - 29057662
Alignment:
Q  288 aaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||| ||||||||||||||||||||||||    
T  29057696 aaagttgtacaaaaatggttgtacaaatatcattt 29057662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 32931944 - 32931986
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||||||||  |||| ||||||||||||||||||||    
T  32931944 gttgtacaaaagttgtcacaaattggttgtacaaatatcattt 32931986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 175
Target Start/End: Complemental strand, 52381287 - 52381253
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaa 175  Q
    |||||||||||||||||||||||||||| ||||||    
T  52381287 agagtagtgatattttgacaaccattttagtacaa 52381253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 329
Target Start/End: Complemental strand, 54134890 - 54134848
Alignment:
Q  287 aaaagttgtaccaaaatggttgtacaaatatcatttttctttc 329  Q
    ||||||||||  |||||||||||||||||||||||| ||||||    
T  54134890 aaaagttgtaaaaaaatggttgtacaaatatcatttctctttc 54134848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 322
Target Start/End: Original strand, 7351665 - 7351706
Alignment:
Q  281 ttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||| || ||| ||||||||||||||||||||||||    
T  7351665 ttgtacaaaaattatacaaaaatggttgtacaaatatcattt 7351706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 322
Target Start/End: Original strand, 29573387 - 29573424
Alignment:
Q  285 acaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||  |||||||||||||||||||||||||    
T  29573387 acaaaagttgttacaaaatggttgtacaaatatcattt 29573424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 322
Target Start/End: Complemental strand, 47101562 - 47101525
Alignment:
Q  285 acaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||  |||||||||||||||||||||||||    
T  47101562 acaaaagttgtcacaaaatggttgtacaaatatcattt 47101525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 322
Target Start/End: Original strand, 48944737 - 48944778
Alignment:
Q  281 ttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||||||   ||||||||||||||||||||||||    
T  48944737 ttgtacaaaagttgttagaaaatggttgtacaaatatcattt 48944778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 328
Target Start/End: Original strand, 49361857 - 49361898
Alignment:
Q  287 aaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    ||||||||||| |||||| ||||||||||||||||| |||||    
T  49361857 aaaagttgtacaaaaatgattgtacaaatatcatttctcttt 49361898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 328
Target Start/End: Complemental strand, 50745395 - 50745366
Alignment:
Q  299 aaaatggttgtacaaatatcatttttcttt 328  Q
    ||||||||||||||||||||||||||||||    
T  50745395 aaaatggttgtacaaatatcatttttcttt 50745366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 50745597 - 50745552
Alignment:
Q  288 aaagttgtaccaaaatggttgtacaaatatcatttttctttcgata 333  Q
    |||||||||| |||||| ||||||||||||||||| ||||| ||||    
T  50745597 aaagttgtacaaaaatgattgtacaaatatcatttctctttagata 50745552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 322
Target Start/End: Complemental strand, 55264861 - 55264820
Alignment:
Q  281 ttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||| ||||||| ||| ||||||||||||||||||||||||    
T  55264861 ttgtataaaagttatacaaaaatggttgtacaaatatcattt 55264820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 328
Target Start/End: Complemental strand, 1436841 - 1436813
Alignment:
Q  300 aaatggttgtacaaatatcatttttcttt 328  Q
    |||||||||||||||||||||||||||||    
T  1436841 aaatggttgtacaaatatcatttttcttt 1436813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 9557948 - 9557996
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    ||||||||||| ||||| |||||| |||||| ||||||||||| |||||    
T  9557948 gttgtacaaaaattgtatcaaaattgttgtataaatatcatttctcttt 9557996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 328
Target Start/End: Complemental strand, 20714288 - 20714240
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    |||||||| |||||||  |||| |||||||||||||||||||| |||||    
T  20714288 gttgtacagaagttgtcacaaattggttgtacaaatatcatttctcttt 20714240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 25806413 - 25806481
Alignment:
Q  143 agtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    |||||| ||||||| |||| |||||||||||||  ||| | |||| ||||||||||||| || ||||||    
T  25806413 agtagtaatattttaacaatcattttggtacaaccttttaaacaattttgttgttctctttttttattg 25806481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 27162495 - 27162543
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    ||||| ||||||||||  |||||||||||||||||||||| || |||||    
T  27162495 gttgttcaaaagttgttacaaaatggttgtacaaatatcacttctcttt 27162543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 316
Target Start/End: Complemental strand, 29057512 - 29057476
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaata 316  Q
    ||||| |||||||||||| ||||||||||||||||||    
T  29057512 gttgtccaaaagttgtactaaaatggttgtacaaata 29057476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 30400182 - 30400230
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    ||||||||||||||||  |||| | |||||||||||||||||| |||||    
T  30400182 gttgtacaaaagttgtcacaaatttgttgtacaaatatcatttctcttt 30400230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 323
Target Start/End: Complemental strand, 32187179 - 32187143
Alignment:
Q  287 aaaagttgtaccaaaatggttgtacaaatatcatttt 323  Q
    |||||||||  ||||||||||||||||||||||||||    
T  32187179 aaaagttgtcacaaaatggttgtacaaatatcatttt 32187143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 35074123 - 35074163
Alignment:
Q  287 aaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    ||||||||| |||||||| ||||||||||||||||| ||||    
T  35074123 aaaagttgtcccaaaatgattgtacaaatatcatttctctt 35074163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 43169775 - 43169815
Alignment:
Q  287 aaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    |||||||||  ||||||||||||||||||||||||| ||||    
T  43169775 aaaagttgtcacaaaatggttgtacaaatatcatttctctt 43169815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 328
Target Start/End: Complemental strand, 49196733 - 49196693
Alignment:
Q  288 aaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    ||||||||  ||||||||||||||||||||||||| |||||    
T  49196733 aaagttgtcacaaaatggttgtacaaatatcatttctcttt 49196693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 211
Target Start/End: Complemental strand, 50879737 - 50879709
Alignment:
Q  183 gacaactttgttgttctctcttcttattg 211  Q
    |||||||||||||||||||||||||||||    
T  50879737 gacaactttgttgttctctcttcttattg 50879709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 53932417 - 53932465
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    ||||| ||||| ||||  ||||||||||||||||||||||||| |||||    
T  53932417 gttgtccaaaaattgtcacaaaatggttgtacaaatatcatttctcttt 53932465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 2e-25; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 144 - 211
Target Start/End: Original strand, 38939082 - 38939149
Alignment:
Q  144 gtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  38939082 gtagtgatattttgacaaccattttggtacaatttttgagataactttgttgttctctcttctcattg 38939149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 141 - 211
Target Start/End: Original strand, 5742544 - 5742614
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||| ||||    
T  5742544 agagtagtgatattttgacaaccattttggtacatcctttgagacaactttgttgttctctcttctcattg 5742614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 143 - 214
Target Start/End: Original strand, 34578226 - 34578297
Alignment:
Q  143 agtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattgatc 214  Q
    |||| ||||||||| ||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  34578226 agtaatgatattttaacaactattttggtataatttttgggacaactttgttgttctctcttcttattgatc 34578297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 141 - 211
Target Start/End: Original strand, 45405722 - 45405792
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    |||||||||||||||| ||||||||||||||||||  |||||||||||||| |||||||||||||| ||||    
T  45405722 agagtagtgatattttaacaaccattttggtacaacctttgagacaactttattgttctctcttctcattg 45405792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 28156386 - 28156317
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||||||||||||||| ||||| ||||||  ||||||||||||||||||||||||||||| ||||    
T  28156386 gagtagtgatattttgacaactattttagtacaacctttgagacaactttgttgttctctcttctcattg 28156317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 141 - 211
Target Start/End: Original strand, 32674119 - 32674189
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    |||||||||||||||||||||||||||| ||||||  |||||||||||||||||||| || ||||| ||||    
T  32674119 agagtagtgatattttgacaaccattttagtacaacctttgagacaactttgttgttatcccttctcattg 32674189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 5742683 - 5742725
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  5742683 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 5742725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 33635759 - 33635689
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||| ||||||||||||||||||||||  |||||| ||||||| |||||| |||||||||||||| ||||    
T  33635759 agagtggtgatattttgacaaccattttaatacaatctttgagataactttattgttctctcttctcattg 33635689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 32674258 - 32674306
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||    
T  32674258 gttgtacaaaagttataccaaaatggttgtacaaatatcatttctcttt 32674306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 328
Target Start/End: Original strand, 18411322 - 18411369
Alignment:
Q  281 ttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||    
T  18411322 ttgtacaaaagttgtaccaaaattgttgtacaaatatcatttatcttt 18411369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 280 - 327
Target Start/End: Complemental strand, 28156248 - 28156201
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  28156248 gttgtacaaaaattgtaccaaaatggttgtacaaatatcatttctctt 28156201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 280 - 327
Target Start/End: Original strand, 35701853 - 35701900
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||    
T  35701853 gttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctctt 35701900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 211
Target Start/End: Complemental strand, 42651097 - 42651034
Alignment:
Q  148 tgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||  ||||| |||||||||||| |||||||||||| ||||||||||||||||| ||||    
T  42651097 tgatatttgaacaactattttggtacaacttttgagacaaccttgttgttctctcttctcattg 42651034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 21649194 - 21649236
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  21649194 gttgtacaaaagttgtacaaaaatggttgtacaaatatcattt 21649236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 327
Target Start/End: Original strand, 22203242 - 22203288
Alignment:
Q  281 ttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||    
T  22203242 ttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctctt 22203288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 27300391 - 27300349
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  27300391 gttgtacaaaagttgtacaaaaatggttgtacaaatatcattt 27300349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 28713277 - 28713207
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    |||||||||||||||  |||||  ||||||||||||||||| |||||| |||||||  |||||||||||||    
T  28713277 agagtagtgatatttgaacaactcttttggtacaatttttgggacaaccttgttgtattctcttcttattg 28713207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 28720624 - 28720554
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    |||||||||||||||  |||||  ||||||||||||||||| |||||| |||||||  |||||||||||||    
T  28720624 agagtagtgatatttgaacaactcttttggtacaatttttgggacaaccttgttgtattctcttcttattg 28720554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 28728266 - 28728196
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    |||||||||||||||  |||||  ||||||||||||||||| |||||| |||||||  |||||||||||||    
T  28728266 agagtagtgatatttgaacaactcttttggtacaatttttgggacaaccttgttgtattctcttcttattg 28728196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 214
Target Start/End: Complemental strand, 18550163 - 18550090
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattgatc 214  Q
    |||||| ||||||||  ||||| |||||||||||| ||||| |||||| |||||||  ||||||||||||||||    
T  18550163 agagtaatgatatttgaacaactattttggtacaacttttgggacaaccttgttgtgttctcttcttattgatc 18550090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 211
Target Start/End: Complemental strand, 25430833 - 25430760
Alignment:
Q  138 gatagagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||||||||||||  |||||  ||||||||||| ||||| |||||| |||||||  |||||||||||||    
T  25430833 gatagagtagtgatatttgaacaactcttttggtacaacttttgggacaaccttgttgtgttctcttcttattg 25430760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 281 - 322
Target Start/End: Original strand, 37784401 - 37784442
Alignment:
Q  281 ttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  37784401 ttgtacaaaagttataccaaaatggttgtacaaatatcattt 37784442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 34883346 - 34883279
Alignment:
Q  143 agtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttatt 210  Q
    |||| ||||||||  ||||| ||||| |||||| |||||| ||||| |||||||||||||||||||||    
T  34883346 agtaatgatatttaaacaactattttagtacaacttttgatacaaccttgttgttctctcttcttatt 34883279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 327
Target Start/End: Original strand, 4148682 - 4148728
Alignment:
Q  281 ttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    ||||||||||||||||| ||||||||| |||||||||||||| ||||    
T  4148682 ttgtacaaaagttgtacaaaaatggttatacaaatatcatttctctt 4148728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 23709021 - 23708979
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||||| ||| ||||||||||||||||||||||||    
T  23709021 gttgtacaaaagttatacaaaaatggttgtacaaatatcattt 23708979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 280 - 329
Target Start/End: Complemental strand, 28713138 - 28713089
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctttc 329  Q
    |||||| ||||||| ||| |||||||||||||||||||||||| ||||||    
T  28713138 gttgtataaaagttatacaaaaatggttgtacaaatatcatttctctttc 28713089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 280 - 329
Target Start/End: Complemental strand, 28720485 - 28720436
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctttc 329  Q
    |||||| ||||||| ||| |||||||||||||||||||||||| ||||||    
T  28720485 gttgtataaaagttatacaaaaatggttgtacaaatatcatttctctttc 28720436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 280 - 329
Target Start/End: Complemental strand, 28728127 - 28728078
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctttc 329  Q
    |||||| ||||||| ||| |||||||||||||||||||||||| ||||||    
T  28728127 gttgtataaaagttatacaaaaatggttgtacaaatatcatttctctttc 28728078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 281 - 322
Target Start/End: Original strand, 34578404 - 34578445
Alignment:
Q  281 ttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||| |||||||||||| ||||||||||||||||||||||||    
T  34578404 ttgttcaaaagttgtacaaaaatggttgtacaaatatcattt 34578445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 328
Target Start/End: Complemental strand, 13924059 - 13924019
Alignment:
Q  288 aaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    |||||||||| |||||||||||||||||||||||| |||||    
T  13924059 aaagttgtacaaaaatggttgtacaaatatcatttctcttt 13924019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 327
Target Start/End: Original strand, 3893424 - 3893471
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    ||||| ||||| |||||||||||| |||||||||||||||||| ||||    
T  3893424 gttgttcaaaaattgtaccaaaatagttgtacaaatatcatttatctt 3893471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 326
Target Start/End: Original strand, 6105469 - 6105508
Alignment:
Q  287 aaaagttgtaccaaaatggttgtacaaatatcatttttct 326  Q
    ||||||||||  ||||||||||||||||||||||||||||    
T  6105469 aaaagttgtaaaaaaatggttgtacaaatatcatttttct 6105508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 14233554 - 14233601
Alignment:
Q  164 attttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||| || ||||| |||||||||||||||||||||||| ||||    
T  14233554 attttggtataacttttgtgacaactttgttgttctctcttctcattg 14233601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 327
Target Start/End: Original strand, 22836165 - 22836212
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    ||||||||||| |||||  |||||||||||||||||||||||| ||||    
T  22836165 gttgtacaaaatttgtatgaaaatggttgtacaaatatcatttctctt 22836212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 322
Target Start/End: Complemental strand, 29509304 - 29509269
Alignment:
Q  287 aaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||| |||||||||||||||||||||||||    
T  29509304 aaaagttgtagcaaaatggttgtacaaatatcattt 29509269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 322
Target Start/End: Complemental strand, 36675374 - 36675339
Alignment:
Q  287 aaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||| ||||||||||||||||||||||||    
T  36675374 aaaagttgtacaaaaatggttgtacaaatatcattt 36675339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 322
Target Start/End: Original strand, 43602456 - 43602491
Alignment:
Q  287 aaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||| |||||||||||||||||||||||||    
T  43602456 aaaagttgtagcaaaatggttgtacaaatatcattt 43602491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 322
Target Start/End: Original strand, 45405841 - 45405876
Alignment:
Q  287 aaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||| |||||||||||||||||||||||||    
T  45405841 aaaagttgtatcaaaatggttgtacaaatatcattt 45405876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 321
Target Start/End: Complemental strand, 102382 - 102348
Alignment:
Q  287 aaaagttgtaccaaaatggttgtacaaatatcatt 321  Q
    |||||||||| ||||||||||||||||||||||||    
T  102382 aaaagttgtaacaaaatggttgtacaaatatcatt 102348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 326
Target Start/End: Complemental strand, 14228752 - 14228706
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttct 326  Q
    |||||||||||||| |  |||||| ||||||||||||||||||||||    
T  14228752 gttgtacaaaagttatcacaaaatagttgtacaaatatcatttttct 14228706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 18550024 - 18549982
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||||| ||| |||||| |||||||||||||||||    
T  18550024 gttgtacaaaagttatacaaaaatgattgtacaaatatcattt 18549982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 328
Target Start/End: Complemental strand, 20288576 - 20288530
Alignment:
Q  282 tgtacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    ||||||||||||||  |||| |||||||||||||||||||| |||||    
T  20288576 tgtacaaaagttgtcacaaattggttgtacaaatatcatttctcttt 20288530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 328
Target Start/End: Complemental strand, 21075205 - 21075159
Alignment:
Q  282 tgtacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    ||||||||||||||  |||| |||||||||||||||||||| |||||    
T  21075205 tgtacaaaagttgtcacaaattggttgtacaaatatcatttctcttt 21075159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 35937538 - 35937580
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||| ||||||||||  |||||||||||||||||||||||||    
T  35937538 gttgtccaaaagttgttacaaaatggttgtacaaatatcattt 35937580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 40459788 - 40459830
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||||| ||||||||| ||||||||||| ||||||    
T  40459788 gttgtacaaaagttataccaaaatagttgtacaaatttcattt 40459830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 42651064 - 42651106
Alignment:
Q  286 caaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    |||||||||||||||||| ||||| ||||||||||| ||||||    
T  42651064 caaaagttgtaccaaaatagttgttcaaatatcattattcttt 42651106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 44001076 - 44001034
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||| ||||| |||||| ||||||||||||||||||    
T  44001076 gttgtacaaaaattgtatcaaaatagttgtacaaatatcattt 44001034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 327
Target Start/End: Complemental strand, 1248292 - 1248251
Alignment:
Q  286 caaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    |||||||||||  |||||||||||||||||||||||| ||||    
T  1248292 caaaagttgtaagaaaatggttgtacaaatatcatttctctt 1248251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 325
Target Start/End: Original strand, 6656371 - 6656416
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttc 325  Q
    ||||||||||||||||  |||| ||||| |||||||||||||||||    
T  6656371 gttgtacaaaagttgtcacaaattggttctacaaatatcatttttc 6656416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 325
Target Start/End: Original strand, 6736773 - 6736818
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttc 325  Q
    ||||||||||||||||  |||| ||||| |||||||||||||||||    
T  6736773 gttgtacaaaagttgtcacaaattggttctacaaatatcatttttc 6736818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 322
Target Start/End: Original strand, 10644833 - 10644870
Alignment:
Q  285 acaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||  |||||||||||||||||||||||||    
T  10644833 acaaaagttgttacaaaatggttgtacaaatatcattt 10644870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 328
Target Start/End: Complemental strand, 25430691 - 25430654
Alignment:
Q  291 gttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  25430691 gttgtacaaaaatggttgtacaaatatcatttctcttt 25430654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 322
Target Start/End: Original strand, 34838297 - 34838338
Alignment:
Q  281 ttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||||||||| ||| ||| ||||||||||||||||    
T  34838297 ttgtacaaaagttgtacaaaattggatgtacaaatatcattt 34838338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 327
Target Start/End: Original strand, 45253640 - 45253681
Alignment:
Q  286 caaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    |||||||||||  |||||||||||||||||||||||| ||||    
T  45253640 caaaagttgtaagaaaatggttgtacaaatatcatttatctt 45253681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 328
Target Start/End: Original strand, 5771906 - 5771950
Alignment:
Q  284 tacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    ||||||||||||  |||||||||||| |||||||||||| |||||    
T  5771906 tacaaaagttgtcacaaaatggttgttcaaatatcatttctcttt 5771950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 33692906 - 33692842
Alignment:
Q  140 tagagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctctt 204  Q
    ||||||| ||||||||  |||||  ||||| || |||||||| |||||||||||||| |||||||    
T  33692906 tagagtaatgatatttgaacaacttttttgttataatttttgggacaactttgttgtgctctctt 33692842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 34838155 - 34838227
Alignment:
Q  139 atagagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    |||||| ||||||||||  |||||  ||||||||||| ||||  |||||| |||||||  |||||||||||||    
T  34838155 atagagcagtgatatttgaacaactcttttggtacaacttttaggacaaccttgttgtgttctcttcttattg 34838227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 43587679 - 43587639
Alignment:
Q  287 aaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    |||||||||| |||||||||| |||||||||||||| ||||    
T  43587679 aaaagttgtagcaaaatggttatacaaatatcatttctctt 43587639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 6e-25; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 141 - 211
Target Start/End: Original strand, 2600421 - 2600491
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||    
T  2600421 agagtagtgatattttgacaaccattttggtacaacctttgagacaactttgttgttctctcttctcattg 2600491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 640575 - 640506
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    |||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  640575 gagtagtgatattttgacaatcattttggtataatctttgagacaactttgttgttctctcttctcattg 640506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 37970116 - 37970047
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||| ||||    
T  37970116 gagtagtgatattttaacaaccattttggtacaacatttgagacaactttgttgttctctcttctcattg 37970047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 145 - 211
Target Start/End: Complemental strand, 47379740 - 47379674
Alignment:
Q  145 tagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    |||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||| ||||    
T  47379740 tagtgatattttgacaactattttggtgcaacttttgagacaactttgttgttctctcttctcattg 47379674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 146 - 211
Target Start/End: Original strand, 28548127 - 28548192
Alignment:
Q  146 agtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||||| ||||||||||| ||||||| |||||||||||||| |||||||||||||||||||    
T  28548127 agtgatattttaacaaccattttagtacaatctttgagacaactttattgttctctcttcttattg 28548192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 204
Target Start/End: Complemental strand, 11070412 - 11070349
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctctt 204  Q
    ||||||||||||||||||||| |||||||||| ||| ||||||||||||||||| |||||||||    
T  11070412 agagtagtgatattttgacaatcattttggtagaatctttgagacaactttgttcttctctctt 11070349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 148 - 214
Target Start/End: Original strand, 41458794 - 41458860
Alignment:
Q  148 tgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattgatc 214  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||||||||| || | |||||||    
T  41458794 tgatattttgacaatcattttggtacaacttttgagacaactttgttgttctcttttttcattgatc 41458860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 280 - 329
Target Start/End: Complemental strand, 640437 - 640388
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctttc 329  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  640437 gttgtacaaaaattgtacaaaaatggttgtacaaatatcatttttctttc 640388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 280 - 325
Target Start/End: Complemental strand, 45335907 - 45335862
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttc 325  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  45335907 gttgtacaaaagttgtacaaaaatggttgtacaaatatcatttttc 45335862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 384736 - 384665
Alignment:
Q  140 tagagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||||||||||| | || ||||||| |||||  ||||||||||||||||| ||||||||||| ||||    
T  384736 tagagtagtgatattttaaaaatcattttgatacaacctttgagacaactttgttattctctcttctcattg 384665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 280 - 327
Target Start/End: Original strand, 28548247 - 28548294
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||    
T  28548247 gttgtacaaaagttgtaccaaaatagttgtacaaatatcatttctctt 28548294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 280 - 327
Target Start/End: Original strand, 48639409 - 48639456
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||    
T  48639409 gttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctctt 48639456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 2600560 - 2600602
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  2600560 gttgtacaaaagttgtactaaaatggttgtacaaatatcattt 2600602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 11789717 - 11789759
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  11789717 gttgtacaaaagttgtactaaaatggttgtacaaatatcattt 11789759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 30538671 - 30538629
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  30538671 gttgtacaaaagttgtaccaaaattgttgtacaaatatcattt 30538629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 214
Target Start/End: Original strand, 33341012 - 33341085
Alignment:
Q  142 gagtagtgatatttt-gacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattgatc 214  Q
    ||||||||||||||| |||||| ||||||||| ||| |||||||||||||||||||| |  ||||| |||||||    
T  33341012 gagtagtgatatttttgacaactattttggtataatgtttgagacaactttgttgttttaccttctcattgatc 33341085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 321
Target Start/End: Original strand, 41910211 - 41910252
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatt 321  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  41910211 gttgtacaaaagttgtacaaaaatggttgtacaaatatcatt 41910252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 280 - 328
Target Start/End: Complemental strand, 27704480 - 27704432
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    |||||||||||||||||| ||||| |||||||||||||||||| |||||    
T  27704480 gttgtacaaaagttgtacaaaaatagttgtacaaatatcatttctcttt 27704432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 27943140 - 27943088
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgtt 194  Q
    ||||||||||||||| |||| |||||||||||||| |||||||||| ||||||    
T  27943140 gagtagtgatattttaacaatcattttggtacaatctttgagacaattttgtt 27943088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 280 - 327
Target Start/End: Complemental strand, 41538527 - 41538480
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    ||||||||||| |||||| |||||||||||||||||||||||| ||||    
T  41538527 gttgtacaaaaattgtacaaaaatggttgtacaaatatcatttctctt 41538480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 11070273 - 11070231
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||||| ||| ||||||||||||||||||||||||    
T  11070273 gttgtacaaaagttatactaaaatggttgtacaaatatcattt 11070231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 23034339 - 23034381
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||| |||||| ||||||||||||||||||||||||    
T  23034339 gttgtacaaaaattgtacaaaaatggttgtacaaatatcattt 23034381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 33050228 - 33050186
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||||||||  |||||||||||||||||||||||||    
T  33050228 gttgtacaaaagttgtcacaaaatggttgtacaaatatcattt 33050186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 37969976 - 37969934
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||||||||| |||||| ||||||||||||||||||    
T  37969976 gttgtacaaaagttgtatcaaaatagttgtacaaatatcattt 37969934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 23034201 - 23034270
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||||||||  |||||  ||||||||||| ||||| |||||| ||||||| |||| |||||||||    
T  23034201 gagtagtgatatttgaacaactcttttggtacaacttttgggacaaccttgttgtgctcttttcttattg 23034270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 45336046 - 45335977
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||||||||  || ||  ||||||||||| ||||| |||||| ||||||||||||||| ||||||    
T  45336046 gagtagtgatatttgaactactcttttggtacaaattttgggacaaccttgttgttctctctttttattg 45335977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 30864443 - 30864491
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    ||||||||||||||||  |||| |||||||||||||||||||| |||||    
T  30864443 gttgtacaaaagttgtcacaaattggttgtacaaatatcatttctcttt 30864491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 48522194 - 48522154
Alignment:
Q  287 aaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    ||||||||||| |||||||||||||||||||||||| ||||    
T  48522194 aaaagttgtacaaaaatggttgtacaaatatcatttctctt 48522154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 327
Target Start/End: Complemental strand, 4971335 - 4971288
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    |||||| |||||||||  ||||||||||||||||||||||||| ||||    
T  4971335 gttgtataaaagttgtcacaaaatggttgtacaaatatcatttctctt 4971288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 322
Target Start/End: Original strand, 34349060 - 34349095
Alignment:
Q  287 aaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||| ||||||||||||||||||||||||    
T  34349060 aaaagttgtacaaaaatggttgtacaaatatcattt 34349095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 327
Target Start/End: Complemental strand, 44511184 - 44511137
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    ||||||||||||||||  |||||||||||||| |||||||||| ||||    
T  44511184 gttgtacaaaagttgtcacaaaatggttgtacgaatatcatttctctt 44511137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 47945028 - 47944985
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatgg-ttgtacaaatatcattt 322  Q
    |||||||||||||||||| ||||||| |||||||||||||||||    
T  47945028 gttgtacaaaagttgtacaaaaatggtttgtacaaatatcattt 47944985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 47950458 - 47950415
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatgg-ttgtacaaatatcattt 322  Q
    |||||||||||||||||| ||||||| |||||||||||||||||    
T  47950458 gttgtacaaaagttgtacaaaaatggtttgtacaaatatcattt 47950415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 2347085 - 2347127
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||| ||||||||  |||||||||||||||||||||||||    
T  2347085 gttgtaccaaagttgtcacaaaatggttgtacaaatatcattt 2347127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 322
Target Start/End: Complemental strand, 25272639 - 25272605
Alignment:
Q  288 aaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||| ||||||||||||||||||||||||    
T  25272639 aaagttgtacaaaaatggttgtacaaatatcattt 25272605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 322
Target Start/End: Original strand, 27866560 - 27866594
Alignment:
Q  288 aaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||| ||||||||||||||||||||||||    
T  27866560 aaagttgtacaaaaatggttgtacaaatatcattt 27866594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 29763875 - 29763833
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||||| |  |||||||||||||||||||||||||    
T  29763875 gttgtacaaaagttatcacaaaatggttgtacaaatatcattt 29763833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 32747416 - 32747370
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaa 187  Q
    |||||| ||||||||||||||||||||||||| ||  ||||||||||    
T  32747416 agagtattgatattttgacaaccattttggtataacctttgagacaa 32747370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 327
Target Start/End: Original strand, 33223564 - 33223602
Alignment:
Q  289 aagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  33223564 aagttgtcacaaaatggttgtacaaatatcatttttctt 33223602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 327
Target Start/End: Original strand, 33341152 - 33341198
Alignment:
Q  281 ttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    ||||||||||||| ||| ||||| |||||||||||||||||| ||||    
T  33341152 ttgtacaaaagttatactaaaattgttgtacaaatatcatttctctt 33341198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 322
Target Start/End: Original strand, 40207830 - 40207868
Alignment:
Q  284 tacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||||| ||||| ||||||||||||||||||    
T  40207830 tacaaaagttgtacaaaaatagttgtacaaatatcattt 40207868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 41458926 - 41458968
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||| |||||| ||||||||||||||||||| ||||    
T  41458926 gttgtacaaaaattgtactaaaatggttgtacaaatattattt 41458968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 47945167 - 47945097
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    |||||||||||||||  |||||  ||||| ||||| ||||| |||||| |||||||  |||||||||||||    
T  47945167 agagtagtgatatttgaacaactcttttgatacaacttttgggacaaccttgttgtgttctcttcttattg 47945097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 47950597 - 47950527
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    |||||||||||||||  |||||  ||||| ||||| ||||| |||||| |||||||  |||||||||||||    
T  47950597 agagtagtgatatttgaacaactcttttgatacaacttttgggacaaccttgttgtgttctcttcttattg 47950527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 24380609 - 24380678
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||||||||  |||||  ||||||||||| |||||  ||||| |||||||  |||||||||||||    
T  24380609 gagtagtgatatttgaacaactcttttggtacaacttttggaacaaccttgttgtgttctcttcttattg 24380678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 211
Target Start/End: Complemental strand, 27704614 - 27704549
Alignment:
Q  146 agtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||||  |||||  ||||| ||||| ||||| ||||||||||||||  |||||||||||||    
T  27704614 agtgatatttgaacaactcttttgttacaacttttgggacaactttgttgtgttctcttcttattg 27704549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 322
Target Start/End: Original strand, 35491438 - 35491479
Alignment:
Q  281 ttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||||||||  |||||||| ||||||||||||||    
T  35491438 ttgtacaaaagttgtacataaatggttatacaaatatcattt 35491479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 322
Target Start/End: Original strand, 37325846 - 37325887
Alignment:
Q  281 ttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||||||  |||| ||||||||||||||||||||    
T  37325846 ttgtacaaaagttgtcacaaattggttgtacaaatatcattt 37325887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 322
Target Start/End: Original strand, 39533412 - 39533453
Alignment:
Q  281 ttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||| |||||||||| |||||||||| ||||||||||||||    
T  39533412 ttgtataaaagttgtatcaaaatggttatacaaatatcattt 39533453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 5378665 - 5378625
Alignment:
Q  287 aaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    ||||||||||  |||||||||||||||||||||||| ||||    
T  5378665 aaaagttgtataaaaatggttgtacaaatatcatttctctt 5378625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 5868328 - 5868376
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    ||||| ||||||||||  |||||| |||||||||||||| |||||||||    
T  5868328 gttgttcaaaagttgttacaaaatagttgtacaaatatcgtttttcttt 5868376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 322
Target Start/End: Complemental strand, 7295489 - 7295453
Alignment:
Q  286 caaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||| |||||| ||||||||||||||||||||||||    
T  7295489 caaaaattgtactaaaatggttgtacaaatatcattt 7295453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 328
Target Start/End: Complemental strand, 24700166 - 24700118
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    |||||| |||||||||  ||||||| ||||||||||||||||| |||||    
T  24700166 gttgtaaaaaagttgttacaaaatgattgtacaaatatcatttctcttt 24700118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 36108210 - 36108170
Alignment:
Q  287 aaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    |||| ||||| ||||||||||||||||||||||||| ||||    
T  36108210 aaaaattgtatcaaaatggttgtacaaatatcatttctctt 36108170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 214
Target Start/End: Complemental strand, 36108354 - 36108283
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattgatc 214  Q
    ||||||||||||||| ||||| |||||||||| |  |||||||||||||| ||||| ||| || | |||||||    
T  36108354 gagtagtgatattttaacaactattttggtac-acctttgagacaactttattgttatctattttcattgatc 36108283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 37385259 - 37385307
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    ||||||||||||||||   ||||| |||||||||||||||||| |||||    
T  37385259 gttgtacaaaagttgtcaaaaaatagttgtacaaatatcatttatcttt 37385307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 42060694 - 42060654
Alignment:
Q  287 aaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    ||||||| || ||||||||||||||||||||||||| ||||    
T  42060694 aaaagttatagcaaaatggttgtacaaatatcatttctctt 42060654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 6e-25; HSPs: 68)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 40721955 - 40721885
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||    
T  40721955 agagtagtgatattttgacaaccattttggtacaacctttgagacaactttgttgttctctcttctcattg 40721885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 34373192 - 34373122
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    |||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||| ||||    
T  34373192 agagtagtgatattttgacaaccattttggtataacctttgagacaactttgttgttctctcttctcattg 34373122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 141 - 203
Target Start/End: Original strand, 38724204 - 38724266
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctct 203  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  38724204 agagtagtgatattttgacaaccattttggtacaacctttgagacaactttgttgttctctct 38724266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 43026119 - 43026050
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    |||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||| ||||    
T  43026119 gagtagtgatattttgacaatcattttggtacaacctttgagacaactttgttgttctctcttctcattg 43026050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 24727587 - 24727523
Alignment:
Q  140 tagagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctctt 204  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  24727587 tagagtagtgatattttgacaaccattttggtacaacctttgagacaactttattgttctctctt 24727523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 211
Target Start/End: Complemental strand, 25094530 - 25094466
Alignment:
Q  147 gtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||    
T  25094530 gtgatattttgacaaccattttagtacaatctttgagacaactttgttgttctctcttctaattg 25094466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 9377647 - 9377715
Alignment:
Q  143 agtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    |||| ||||||||| ||||||||||||||| ||  ||||||||||||||||||||||||||||||||||    
T  9377647 agtaatgatattttaacaaccattttggtataacctttgagacaactttgttgttctctcttcttattg 9377715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 142 - 201
Target Start/End: Complemental strand, 1151712 - 1151653
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctct 201  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||    
T  1151712 gagtagtgatattttgacaactattttggtacaacctttgagacaactttgttgttctct 1151653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 4858295 - 4858234
Alignment:
Q  143 agtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctctt 204  Q
    ||||||||||||||||||| |||||||||||||  |||||||||| ||||||||||||||||    
T  4858295 agtagtgatattttgacaatcattttggtacaacctttgagacaattttgttgttctctctt 4858234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 27328997 - 27329066
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||||||||| ||||| |||||||||||  ||||||||||||||||||||||||| |||| ||||    
T  27328997 gagtagtgatattttaacaacaattttggtacatcttttgagacaactttgttgttctcttttctcattg 27329066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 35518461 - 35518389
Alignment:
Q  139 atagagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    |||||||| ||||||||  ||||| |||||| ||||| ||||| |||||||||||||||||||||||||||||    
T  35518461 atagagtaatgatatttgaacaactattttgatacaacttttgggacaactttgttgttctctcttcttattg 35518389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 211
Target Start/End: Original strand, 304879 - 304949
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||| |||||||||| |||||||||||| |||||  ||||||||||||||||||||| ||||||| ||||    
T  304879 agagttgtgatattttaacaaccattttgatacaacctttgagacaactttgttgttcactcttctcattg 304949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 204
Target Start/End: Original strand, 11728009 - 11728071
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctctt 204  Q
    ||||||||||||||| |||| |||||||||||||| ||| |||||||||||||||| ||||||    
T  11728009 gagtagtgatattttaacaatcattttggtacaatctttaagacaactttgttgttttctctt 11728071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 204
Target Start/End: Original strand, 13850076 - 13850134
Alignment:
Q  146 agtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctctt 204  Q
    ||||||||||||||||| ||||||||| || ||||||||||| ||||||||||||||||    
T  13850076 agtgatattttgacaactattttggtataacttttgagacaattttgttgttctctctt 13850134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 280 - 328
Target Start/End: Complemental strand, 30340038 - 30339990
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||    
T  30340038 gttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctcttt 30339990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 280 - 328
Target Start/End: Complemental strand, 40721816 - 40721768
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||    
T  40721816 gttgtacaaaagttgtaccaaaatggctgtacaaatatcatttctcttt 40721768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 8757729 - 8757658
Alignment:
Q  140 tagagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||| ||||||||  ||||| |||||||||||| |||||  ||||| ||||||||||||||||||||||    
T  8757729 tagagtaatgatatttgaacaactattttggtacaacttttggtacaaccttgttgttctctcttcttattg 8757658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 5852519 - 5852477
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  5852519 gttgtacaaaagttgtacaaaaatggttgtacaaatatcattt 5852477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 11728147 - 11728189
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  11728147 gttgtacaaaagttgtaccaaaatggttgtacaaacatcattt 11728189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 146 - 204
Target Start/End: Original strand, 37827677 - 37827735
Alignment:
Q  146 agtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctctt 204  Q
    ||||||||||| ||||  ||||||||||||| ||| |||||||||||||||||||||||    
T  37827677 agtgatattttaacaattattttggtacaatctttaagacaactttgttgttctctctt 37827735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 23141537 - 23141468
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||||||||  |||||  ||||||||||| ||||| |||||| ||||||||||||||||| ||||    
T  23141537 gagtagtgatatttgaacaactcttttggtacaacttttgggacaaccttgttgttctctcttctcattg 23141468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 23553327 - 23553258
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||||||||  |||||  ||||||||||| ||||| |||||| ||||||||||||||||| ||||    
T  23553327 gagtagtgatatttgaacaactcttttggtacaacttttgggacaaccttgttgttctctcttctcattg 23553258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 30340177 - 30340108
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||||||||  |||||  ||||||||||| ||||| |||||| ||||||||||||||||| ||||    
T  30340177 gagtagtgatatttgaacaactcttttggtacaacttttgggacaaccttgttgttctctcttctcattg 30340108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 280 - 324
Target Start/End: Complemental strand, 17999791 - 17999747
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattttt 324  Q
    ||||||||||||||||||  |||||||||||||||||||||||||    
T  17999791 gttgtacaaaagttgtacacaaatggttgtacaaatatcattttt 17999747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 38027641 - 38027689
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    |||||||||||||||||| |||||| |||||||| ||||||||||||||    
T  38027641 gttgtacaaaagttgtacaaaaatgattgtacaagtatcatttttcttt 38027689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 327
Target Start/End: Complemental strand, 12208483 - 12208440
Alignment:
Q  284 tacaaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    |||||||||||||| |||||||||||||||||||||||| ||||    
T  12208483 tacaaaagttgtacaaaaatggttgtacaaatatcatttctctt 12208440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 280 - 327
Target Start/End: Complemental strand, 19637274 - 19637227
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  19637274 gttgtacaaaagttatacaaaaatggttgtacaaatatcatttctctt 19637227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 280 - 327
Target Start/End: Complemental strand, 19835867 - 19835820
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  19835867 gttgtacaaaagttatacaaaaatggttgtacaaatatcatttctctt 19835820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 280 - 327
Target Start/End: Complemental strand, 27529574 - 27529527
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    |||||||||||||||||| ||||||||| |||||||||||||| ||||    
T  27529574 gttgtacaaaagttgtacaaaaatggttctacaaatatcatttctctt 27529527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 280 - 327
Target Start/End: Complemental strand, 34141487 - 34141440
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    |||||||||||||||||| |||||| ||||||||||||||||| ||||    
T  34141487 gttgtacaaaagttgtacaaaaatgattgtacaaatatcatttctctt 34141440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 322
Target Start/End: Complemental strand, 3839451 - 3839413
Alignment:
Q  284 tacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  3839451 tacaaaagttataccaaaatggttgtacaaatatcattt 3839413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 6328712 - 6328670
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||| || ||||||||||||||||||||||||||||    
T  6328712 gttgtacaaaaattataccaaaatggttgtacaaatatcattt 6328670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 322
Target Start/End: Complemental strand, 24727463 - 24727429
Alignment:
Q  288 aaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||||||||||||||||||||||||||    
T  24727463 aaagttgtaccaaaatggttgtacaaatatcattt 24727429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 25094397 - 25094355
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||| |||||||||||||||| ||||||||||||||    
T  25094397 gttgtacaaaaattgtaccaaaatggttatacaaatatcattt 25094355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 28679173 - 28679131
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||||||||| |||||| |||||||||||||||||    
T  28679173 gttgtacaaaagttgtacaaaaatgattgtacaaatatcattt 28679131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 34373050 - 34373008
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||| || ||||||||||||||||||||||||||||    
T  34373050 gttgtacaaaaattataccaaaatggttgtacaaatatcattt 34373008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 35203775 - 35203817
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||||||| || ||||||||||||||||||||||||    
T  35203775 gttgtacaaaagttgaacaaaaatggttgtacaaatatcattt 35203817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 44897671 - 44897629
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||| |||||||||| ||||||||||||||||||||||||    
T  44897671 gttgtacgaaagttgtacaaaaatggttgtacaaatatcattt 44897629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 329
Target Start/End: Original strand, 11828843 - 11828884
Alignment:
Q  288 aaagttgtaccaaaatggttgtacaaatatcatttttctttc 329  Q
    |||||||||| |||||||||||||||||||||||| ||||||    
T  11828843 aaagttgtacaaaaatggttgtacaaatatcatttatctttc 11828884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 12257084 - 12257015
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||||||||  |||||  ||||||||||||||||| |||||| |||||||  | |||||||||||    
T  12257084 gagtagtgatatttgaacaacttttttggtacaatttttgggacaaccttgttgtgttttcttcttattg 12257015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 19523289 - 19523358
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||| ||||||||  ||||| ||||||||||||||||||  |||| ||| |||||||||||| ||||||    
T  19523289 gagtaatgatatttaaacaactattttggtacaatttttggtacaattttattgttctctctttttattg 19523358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 34141626 - 34141557
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||||||||  |||||  ||||||||||| |||||  |||||||||||||  |||||||||||||    
T  34141626 gagtagtgatatttgaacaactcttttggtacaacttttggaacaactttgttgtgttctcttcttattg 34141557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 328
Target Start/End: Original strand, 27329132 - 27329172
Alignment:
Q  288 aaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    ||||||||||||||||| ||||||||||||||||| |||||    
T  27329132 aaagttgtaccaaaatgattgtacaaatatcatttctcttt 27329172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 30413759 - 30413799
Alignment:
Q  287 aaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    |||||||||| ||||||||||||||||||||||||| ||||    
T  30413759 aaaagttgtagcaaaatggttgtacaaatatcatttctctt 30413799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 327
Target Start/End: Original strand, 305006 - 305045
Alignment:
Q  288 aaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    |||||||||||||||||||||||||||||| |||| ||||    
T  305006 aaagttgtaccaaaatggttgtacaaatataatttctctt 305045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 12256946 - 12256904
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||||| ||| |||||| |||||||||||||||||    
T  12256946 gttgtacaaaagttatacaaaaatgattgtacaaatatcattt 12256904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 18749389 - 18749431
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||| || ||| ||||||||||||||||||||||||    
T  18749389 gttgtacaaaaattatacaaaaatggttgtacaaatatcattt 18749431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 26387885 - 26387927
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||| |||||||||| | ||||||||||||||||||||||    
T  26387885 gttgtacgaaagttgtacaagaatggttgtacaaatatcattt 26387927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 322
Target Start/End: Original strand, 27538939 - 27538973
Alignment:
Q  288 aaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||| ||||||||||||||||||||||||    
T  27538939 aaagttgtacaaaaatggttgtacaaatatcattt 27538973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 28679311 - 28679241
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    |||||| ||||||||  |||||  ||||||||||| ||||| |||||| |||||||  |||||||||||||    
T  28679311 agagtaatgatatttgaacaactcttttggtacaacttttgggacaaccttgttgtattctcttcttattg 28679241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 30487495 - 30487537
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||||||||  |||| ||||||||||||||||||||    
T  30487495 gttgtacaaaagttgtcacaaattggttgtacaaatatcattt 30487537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 203
Target Start/End: Complemental strand, 33569728 - 33569690
Alignment:
Q  165 ttttggtacaatttttgagacaactttgttgttctctct 203  Q
    ||||||||||| |||||||||||||||||| ||||||||    
T  33569728 ttttggtacaacttttgagacaactttgttattctctct 33569690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 36909869 - 36909911
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||| ||||||||||  |||||||||||||||||||||||||    
T  36909869 gttgtccaaaagttgtcacaaaatggttgtacaaatatcattt 36909911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 44484682 - 44484724
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||| ||||  |||||||||||||||||||||||||    
T  44484682 gttgtacaaaaattgttacaaaatggttgtacaaatatcattt 44484724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 327
Target Start/End: Complemental strand, 5031962 - 5031921
Alignment:
Q  286 caaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    ||||||||||  ||||||||||||||||||||||||| ||||    
T  5031962 caaaagttgttacaaaatggttgtacaaatatcatttctctt 5031921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 328
Target Start/End: Original strand, 7498024 - 7498065
Alignment:
Q  287 aaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    ||||||||||  |||||||||||||||||||||||| |||||    
T  7498024 aaaagttgtaataaaatggttgtacaaatatcatttctcttt 7498065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 322
Target Start/End: Complemental strand, 11126507 - 11126466
Alignment:
Q  281 ttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||||| | | ||||||||||||||||||||||||    
T  11126507 ttgtacaaaagttatgcaaaaatggttgtacaaatatcattt 11126466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 329
Target Start/End: Original strand, 34144577 - 34144626
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctttc 329  Q
    ||||||||||| ||||  |||| |||||||||||||||||||| ||||||    
T  34144577 gttgtacaaaaattgtcacaaattggttgtacaaatatcatttctctttc 34144626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 324
Target Start/End: Original strand, 3366423 - 3366467
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattttt 324  Q
    |||||||||||||||||  ||||| | ||||||||||||||||||    
T  3366423 gttgtacaaaagttgtaataaaatagatgtacaaatatcattttt 3366467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 210
Target Start/End: Complemental strand, 5852641 - 5852573
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttatt 210  Q
    ||||||||||||||  |||||  |||||||| || ||||| |||||| |||||||  ||||||||||||    
T  5852641 gagtagtgatatttgaacaactcttttggtaaaacttttgggacaaccttgttgtgttctcttcttatt 5852573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 6666058 - 6666018
Alignment:
Q  287 aaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    ||||||||||  |||||||||||||||||||||||| ||||    
T  6666058 aaaagttgtaataaaatggttgtacaaatatcatttctctt 6666018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 328
Target Start/End: Original strand, 12877460 - 12877504
Alignment:
Q  284 tacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    ||||||||||||   ||| ||||||||||||||||||||||||||    
T  12877460 tacaaaagttgtcataaattggttgtacaaatatcatttttcttt 12877504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 327
Target Start/End: Original strand, 16447291 - 16447319
Alignment:
Q  299 aaaatggttgtacaaatatcatttttctt 327  Q
    |||||||||||||||||||||||||||||    
T  16447291 aaaatggttgtacaaatatcatttttctt 16447319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 19529580 - 19529540
Alignment:
Q  287 aaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    |||||||||  ||||||||||||| ||||||||||||||||    
T  19529580 aaaagttgtcacaaaatggttgtataaatatcatttttctt 19529540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 27307257 - 27307305
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    ||||||||||||||||  |||| || ||||||||||||||||| |||||    
T  27307257 gttgtacaaaagttgtcacaaattgattgtacaaatatcatttctcttt 27307305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 32755863 - 32755799
Alignment:
Q  140 tagagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctctt 204  Q
    ||||||||||||||||  ||||||||||||  |||| |||||||||| | || || |||||||||    
T  32755863 tagagtagtgatatttctacaaccattttgtgacaacttttgagacagccttatttttctctctt 32755799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 201
Target Start/End: Original strand, 38533109 - 38533145
Alignment:
Q  165 ttttggtacaatttttgagacaactttgttgttctct 201  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  38533109 ttttggtacaatttttgggacaaccttgttgttctct 38533145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 317
Target Start/End: Complemental strand, 43514936 - 43514900
Alignment:
Q  281 ttgtacaaaagttgtaccaaaatggttgtacaaatat 317  Q
    ||||| ||||||||||||||||||||||| |||||||    
T  43514936 ttgtataaaagttgtaccaaaatggttgttcaaatat 43514900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 145 - 211
Target Start/End: Original strand, 54553 - 54619
Alignment:
Q  145 tagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  54553 tagtgatattttgacaactattttggtacaatctttgagacaactttgttgttctctctttttattg 54619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 142 - 214
Target Start/End: Original strand, 36946980 - 36947052
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattgatc 214  Q
    |||||||||||||||||||||||||||| || ||||||||||| || |||||||||||||||| |||||||||    
T  36946980 gagtagtgatattttgacaaccattttgatataatttttgagataattttgttgttctctctttttattgatc 36947052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 4949120 - 4949191
Alignment:
Q  140 tagagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||| ||||    
T  4949120 tagagtaatgatattttgataaccattttggtacaacttttgagacaactttgttgttctttcttctcattg 4949191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 141 - 204
Target Start/End: Original strand, 46309010 - 46309073
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctctt 204  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||    
T  46309010 agagtagtgatattttgacaaccattttggtacaacctttgagacaactttgtagttctctctt 46309073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 142 - 204
Target Start/End: Original strand, 1987601 - 1987663
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctctt 204  Q
    |||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||    
T  1987601 gagtagtgatattttgacaatcattttggtacaacctttgagacaactttgttgttctctctt 1987663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 30250184 - 30250255
Alignment:
Q  140 tagagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||||||||||| | || |||||||||||||  ||||||||||||||||||||||||||| ||||||    
T  30250184 tagagtagtgatattttaaaaatcattttggtacaacctttgagacaactttgttgttctctctttttattg 30250255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 37732134 - 37732063
Alignment:
Q  140 tagagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||||||||||| |||||||||| |||||||| ||||| |||||||| |||||||||||| ||||||    
T  37732134 tagagtagtgatattttaacaaccatttcggtacaatctttgaaacaactttattgttctctctttttattg 37732063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 9827874 - 9827942
Alignment:
Q  143 agtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||||||||||||| |||||||||| ||  |||||||||||||||||||| |||||||| ||||    
T  9827874 agtagtgatattttgacaatcattttggtataacctttgagacaactttgttgttatctcttctcattg 9827942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 142 - 205
Target Start/End: Original strand, 26442276 - 26442339
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttc 205  Q
    ||||||||||||||| ||||| ||||||||||||  ||||||||||||||||||||||| ||||    
T  26442276 gagtagtgatattttaacaacaattttggtacaacctttgagacaactttgttgttctcccttc 26442339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 145 - 204
Target Start/End: Complemental strand, 34538110 - 34538051
Alignment:
Q  145 tagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctctt 204  Q
    |||||||||||||||||| ||||||||||||  |||||||||||||||||||||| ||||    
T  34538110 tagtgatattttgacaactattttggtacaacctttgagacaactttgttgttctatctt 34538051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 6093495 - 6093560
Alignment:
Q  144 gtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttat 209  Q
    ||||||||||||| ||||| ||||||||| ||| |||||||||| |||||||||||||||| ||||    
T  6093495 gtagtgatattttaacaactattttggtataatctttgagacaattttgttgttctctctttttat 6093560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 46686408 - 46686356
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgtt 194  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||||||||||    
T  46686408 gagtagtgatattttgacaaccattttggtacaacctttgatacaactttgtt 46686356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 55960884 - 55960828
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgtt 197  Q
    |||||||||||||||| |||||||||||| |||||| ||||||||||| ||||||||    
T  55960884 agagtagtgatattttaacaaccattttgatacaatctttgagacaacgttgttgtt 55960828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 280 - 327
Target Start/End: Original strand, 26442416 - 26442463
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  26442416 gttgtgcaaaagttgtaccaaaatggttgtacaaatatcatttctctt 26442463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 29863596 - 29863554
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  29863596 gttgtacaaaagttataccaaaatggttgtacaaatatcattt 29863554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 31318798 - 31318756
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  31318798 gttgtacaaaaattgtaccaaaatggttgtacaaatatcattt 31318756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 327
Target Start/End: Complemental strand, 35037653 - 35037607
Alignment:
Q  281 ttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||    
T  35037653 ttgtacaaaagttgtatcaaaatggttgtacaaatatcatttctctt 35037607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 43307395 - 43307437
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  43307395 gttgtacaaaagttgtacaaaaatggttgtacaaatatcattt 43307437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 329
Target Start/End: Original strand, 23133563 - 23133612
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctttc 329  Q
    |||||||||||||||||| ||||||||||||||||||| |||| ||||||    
T  23133563 gttgtacaaaagttgtacaaaaatggttgtacaaatataatttctctttc 23133612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 327
Target Start/End: Complemental strand, 41170812 - 41170771
Alignment:
Q  286 caaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  41170812 caaaagttgtaccaaaatggttgtacaaatatcatttatctt 41170771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 18634884 - 18634813
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattgat 213  Q
    ||||| ||||||||  ||||||||||||  ||||||||| ||||||| || || ||||||||||||||||||    
T  18634884 gagtaatgatatttatacaaccattttgaaacaatttttaagacaaccttatttttctctcttcttattgat 18634813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 211
Target Start/End: Complemental strand, 33777071 - 33777008
Alignment:
Q  148 tgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||  ||||| |||||||||||||||||| || ||| ||||||||||||||| ||||||    
T  33777071 tgatatttgaacaactattttggtacaatttttgggataaccttgttgttctctctttttattg 33777008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 280 - 327
Target Start/End: Complemental strand, 45418112 - 45418065
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    |||||| ||||||||||||||||||||| |||||||||||||| ||||    
T  45418112 gttgtagaaaagttgtaccaaaatggttatacaaatatcatttctctt 45418065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 211
Target Start/End: Complemental strand, 46799932 - 46799869
Alignment:
Q  148 tgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||  |||| ||||||||||||||||||| |||||| |||||||||||| |||| ||||    
T  46799932 tgatatttgaacaatcattttggtacaatttttgggacaaccttgttgttctctattctcattg 46799869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 1987739 - 1987781
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||| |||||| ||||||||||||||||||||||||    
T  1987739 gttgtacaaaaattgtactaaaatggttgtacaaatatcattt 1987781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 4577602 - 4577560
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||| |||||| ||||||||||||||||||||||||    
T  4577602 gttgtacaaaaattgtacgaaaatggttgtacaaatatcattt 4577560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 36110318 - 36110248
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    |||||||||||||||  |||||  ||||| ||||||||||| |||||| |||||||  |||||||||||||    
T  36110318 agagtagtgatatttgaacaactcttttgatacaatttttgggacaaccttgttgtgttctcttcttattg 36110248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 45678446 - 45678377
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||| ||||||||  ||||| |||||||||||| |||||  ||||| ||||||||||||||| ||||||    
T  45678446 gagtaatgatatttgaacaactattttggtacaacttttggtacaaccttgttgttctctctttttattg 45678377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 281 - 322
Target Start/End: Complemental strand, 55960744 - 55960703
Alignment:
Q  281 ttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||||| ||||||||||||| ||||||||||||||    
T  55960744 ttgtacaaaagttataccaaaatggttatacaaatatcattt 55960703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 5208353 - 5208401
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    ||||||||||||||||  |||| |||||||||||||||||||| |||||    
T  5208353 gttgtacaaaagttgtcacaaattggttgtacaaatatcatttctcttt 5208401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 322
Target Start/End: Original strand, 33914369 - 33914405
Alignment:
Q  286 caaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||||||||||||| ||||||||||||||    
T  33914369 caaaagttgtaccaaaatggttatacaaatatcattt 33914405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 189
Target Start/End: Complemental strand, 35037766 - 35037718
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaact 189  Q
    ||||||||||||||||||||| |||||| ||||||  ||||||||||||    
T  35037766 agagtagtgatattttgacaatcattttagtacaacctttgagacaact 35037718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 328
Target Start/End: Complemental strand, 37022309 - 37022269
Alignment:
Q  288 aaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    ||||||||| ||||||||||||||||||||||||| |||||    
T  37022309 aaagttgtatcaaaatggttgtacaaatatcatttctcttt 37022269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 328
Target Start/End: Complemental strand, 50291327 - 50291279
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    |||||| ||||||||||| |||||| ||||||||||||||||| |||||    
T  50291327 gttgtataaaagttgtacaaaaatgattgtacaaatatcatttctcttt 50291279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 327
Target Start/End: Original strand, 1868916 - 1868955
Alignment:
Q  288 aaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  1868916 aaagttgtacaaaaatggttgtacaaatatcatttctctt 1868955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 322
Target Start/End: Original strand, 4949267 - 4949302
Alignment:
Q  287 aaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||||||||| ||||||||||||||||||    
T  4949267 aaaagttgtaccaaaatagttgtacaaatatcattt 4949302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 18944470 - 18944399
Alignment:
Q  140 tagagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||||||||||  |||||  ||||||||||| ||||| |||||| || ||||  |||||||||||||    
T  18944470 tagagtagtgatatttgaacaactcttttggtacaacttttgggacaaccttattgtgttctcttcttattg 18944399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 322
Target Start/End: Original strand, 29513729 - 29513764
Alignment:
Q  287 aaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||| |||||||||||||||||||||||||    
T  29513729 aaaagttgtagcaaaatggttgtacaaatatcattt 29513764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 327
Target Start/End: Original strand, 29577462 - 29577509
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    ||||||||||| |||||| ||||| |||||||||||||||||| ||||    
T  29577462 gttgtacaaaaattgtacaaaaatagttgtacaaatatcatttctctt 29577509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 29863712 - 29863665
Alignment:
Q  164 attttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    |||||||||||| |||||||||||| |||||| |||| ||||||||||    
T  29863712 attttggtacaacttttgagacaacattgttgctctcccttcttattg 29863665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 322
Target Start/End: Original strand, 51224871 - 51224906
Alignment:
Q  287 aaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||| |||||||||||||||||||||||||    
T  51224871 aaaagttgtagcaaaatggttgtacaaatatcattt 51224906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 327
Target Start/End: Original strand, 54803354 - 54803401
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    ||||||||||| ||| |||||||| |||||||||||||||||| ||||    
T  54803354 gttgtacaaaaattgcaccaaaatagttgtacaaatatcatttctctt 54803401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 328
Target Start/End: Original strand, 55609197 - 55609239
Alignment:
Q  285 acaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    ||||||||||||| |||||||||||||||||||||||| |||||    
T  55609197 acaaaagttgtac-aaaatggttgtacaaatatcatttctcttt 55609239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 322
Target Start/End: Complemental strand, 56025294 - 56025259
Alignment:
Q  287 aaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||| |||||||||||||||||||||||||    
T  56025294 aaaagttgtagcaaaatggttgtacaaatatcattt 56025259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 3475914 - 3475872
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||||||||   ||||||||||||||||||||||||    
T  3475914 gttgtacaaaagttgtcataaaatggttgtacaaatatcattt 3475872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 322
Target Start/End: Complemental strand, 7795062 - 7795028
Alignment:
Q  288 aaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||| ||||||||||||||||||||||||    
T  7795062 aaagttgtacaaaaatggttgtacaaatatcattt 7795028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 8614366 - 8614296
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    |||||||||||||||  |||||  |||| |||||||||||| |||||| |||||||  | |||||||||||    
T  8614366 agagtagtgatatttgaacaactttttttgtacaatttttgggacaaccttgttgtgttttcttcttattg 8614296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 322
Target Start/End: Original strand, 9828006 - 9828040
Alignment:
Q  288 aaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||| ||||||||||||||||||||||||    
T  9828006 aaagttgtactaaaatggttgtacaaatatcattt 9828040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 322
Target Start/End: Original strand, 24310544 - 24310578
Alignment:
Q  288 aaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||| ||||||||||||||||||||||||    
T  24310544 aaagttgtacaaaaatggttgtacaaatatcattt 24310578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 322
Target Start/End: Original strand, 28899238 - 28899272
Alignment:
Q  288 aaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||||||||| |||||||||||||||||    
T  28899238 aaagttgtaccaaaatgattgtacaaatatcattt 28899272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 30250326 - 30250368
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||| |||| ||||||||| ||||||||||||||||||    
T  30250326 gttgtacaatagttttaccaaaatagttgtacaaatatcattt 30250368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 36110179 - 36110137
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||| |||||| ||||| ||||||||||||||||||    
T  36110179 gttgtacaaaaattgtacaaaaatagttgtacaaatatcattt 36110137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 322
Target Start/End: Complemental strand, 37731963 - 37731929
Alignment:
Q  288 aaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||||||||| |||||||||||||||||    
T  37731963 aaagttgtaccaaaatgattgtacaaatatcattt 37731929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 38960686 - 38960728
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||| |||| |||||| ||||||||||||||||||||||||    
T  38960686 gttgtataaaaattgtacaaaaatggttgtacaaatatcattt 38960728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 321
Target Start/End: Original strand, 43983042 - 43983076
Alignment:
Q  287 aaaagttgtaccaaaatggttgtacaaatatcatt 321  Q
    ||||||||||||||||||||||| |||||||||||    
T  43983042 aaaagttgtaccaaaatggttgttcaaatatcatt 43983076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 46355319 - 46355361
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||| ||||||||||| ||| ||||||||||||||||||||    
T  46355319 gttgtataaaagttgtacaaaagtggttgtacaaatatcattt 46355361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 50291466 - 50291396
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||| |||||  |||||  ||||||||||| ||||| |||||| |||||||  |||||||||||||    
T  50291466 agagtagtgttatttgaacaactcttttggtacaacttttgggacaaccttgttgtgttctcttcttattg 50291396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 211
Target Start/End: Original strand, 54801398 - 54801444
Alignment:
Q  165 ttttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||| || ||||||||||||||||||||| ||||||||||| ||||    
T  54801398 ttttgatataatttttgagacaactttgttattctctcttctcattg 54801444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 55268027 - 55268069
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||||||||  |||| ||||||||||||||||||||    
T  55268027 gttgtacaaaagttgtcacaaattggttgtacaaatatcattt 55268069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 322
Target Start/End: Complemental strand, 1796410 - 1796369
Alignment:
Q  281 ttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||||||  |||| ||||||||||||||||||||    
T  1796410 ttgtacaaaagttgtcacaaattggttgtacaaatatcattt 1796369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 322
Target Start/End: Original strand, 7037511 - 7037552
Alignment:
Q  281 ttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||||||  |||| ||||||||||||||||||||    
T  7037511 ttgtacaaaagttgtcacaaattggttgtacaaatatcattt 7037552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 324
Target Start/End: Original strand, 12694461 - 12694498
Alignment:
Q  287 aaaagttgtaccaaaatggttgtacaaatatcattttt 324  Q
    |||||||||  |||||||||||||||||||||||||||    
T  12694461 aaaagttgtcacaaaatggttgtacaaatatcattttt 12694498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 32294639 - 32294708
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttatt 210  Q
    |||||||||||||||  |||||  |||||||| |||||||| |||||| |||||||  ||| ||||||||    
T  32294639 agagtagtgatatttgaacaactcttttggtataatttttgggacaaccttgttgtgttcttttcttatt 32294708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 38960548 - 38960617
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||||||||  |||||  ||||| ||||||||||| |||||  |||||||  |||||||||||||    
T  38960548 gagtagtgatatttgaacaactcttttgatacaatttttgggacaatcttgttgtgttctcttcttattg 38960617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 322
Target Start/End: Original strand, 51359821 - 51359858
Alignment:
Q  285 acaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||  |||||||||||||||||||||||||    
T  51359821 acaaaagttgtcacaaaatggttgtacaaatatcattt 51359858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 328
Target Start/End: Complemental strand, 3223034 - 3222986
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    ||||||||||||||||  |||| || ||||||||||||||||| |||||    
T  3223034 gttgtacaaaagttgtcacaaattgattgtacaaatatcatttctcttt 3222986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 327
Target Start/End: Complemental strand, 4878012 - 4877964
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgt-acaaatatcatttttctt 327  Q
    |||||||||||||||||| ||||||||||| | ||||||||||| ||||    
T  4878012 gttgtacaaaagttgtacaaaaatggttgtaaaaaatatcatttctctt 4877964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 322
Target Start/End: Complemental strand, 8810610 - 8810574
Alignment:
Q  286 caaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||  ||||||||||||||||||||||||    
T  8810610 caaaagttgtaagaaaatggttgtacaaatatcattt 8810574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 214
Target Start/End: Original strand, 19807310 - 19807378
Alignment:
Q  146 agtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattgatc 214  Q
    ||||||||||  |||||  |||| |||||||||||| |||||| |||||||  | ||||||||||||||    
T  19807310 agtgatatttgaacaactttttttgtacaatttttgggacaaccttgttgtgatatcttcttattgatc 19807378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 329
Target Start/End: Complemental strand, 34995360 - 34995316
Alignment:
Q  285 acaaaagttgtaccaaaatggttgtacaaatatcatttttctttc 329  Q
    |||||||||||  |||||||||||||||||||| |||| ||||||    
T  34995360 acaaaagttgttacaaaatggttgtacaaatataatttctctttc 34995316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 41609705 - 41609753
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    ||||||||||||||||   ||||||| |||||||||||||||| |||||    
T  41609705 gttgtacaaaagttgtcataaaatggatgtacaaatatcatttctcttt 41609753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 322
Target Start/End: Original strand, 43511679 - 43511715
Alignment:
Q  286 caaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  43511679 caaaagttgtacaaaaatagttgtacaaatatcattt 43511715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 322
Target Start/End: Complemental strand, 43864073 - 43864037
Alignment:
Q  286 caaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||| |||||||||||| ||||||||||||||||||    
T  43864073 caaaaattgtaccaaaatagttgtacaaatatcattt 43864037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 44368228 - 44368276
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    ||||||||||||||||  |||| || ||||||||||||||||| |||||    
T  44368228 gttgtacaaaagttgtcacaaattgattgtacaaatatcatttctcttt 44368276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 328
Target Start/End: Complemental strand, 46686281 - 46686242
Alignment:
Q  288 aaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    |||||||||| |||||||||||||||||||||||| |||||    
T  46686281 aaagttgtac-aaaatggttgtacaaatatcatttctcttt 46686242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 47519746 - 47519794
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    ||||| ||||||||||  |||||||| |||||||||||||||| |||||    
T  47519746 gttgttcaaaagttgttacaaaatggatgtacaaatatcatttatcttt 47519794  T

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Target: chr6 (Bit Score: 51; Significance: 4e-20; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 141 - 211
Target Start/End: Complemental strand, 34976800 - 34976730
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||||||||||| |||||||||||||||||  ||||||| ||||||||||||||||||||| ||||    
T  34976800 agagtagtgatattttgtcaaccattttggtacaacctttgagataactttgttgttctctcttctcattg 34976730  T

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Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 204
Target Start/End: Original strand, 3335345 - 3335408
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctctt 204  Q
    |||| ||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||    
T  3335345 agagcagtgatattttgacagccattttgatacaatatttgagacaactttgttgttctctctt 3335408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 280 - 328
Target Start/End: Original strand, 3339525 - 3339573
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    ||||||||||||||||  ||||||||||||||||||||||||| |||||    
T  3339525 gttgtacaaaagttgtcacaaaatggttgtacaaatatcatttctcttt 3339573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 205
Target Start/End: Complemental strand, 35050354 - 35050291
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttc 205  Q
    |||||||| |||||||||||| ||||||||| || |||||||| || ||||||||||| |||||    
T  35050354 gagtagtggtattttgacaactattttggtaaaacttttgagataattttgttgttctatcttc 35050291  T

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Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 27790261 - 27790303
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||| ||||||||||| ||||||||||||||||||||||||    
T  27790261 gttgtataaaagttgtacaaaaatggttgtacaaatatcattt 27790303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 34792067 - 34792025
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||||||||| |||||| |||||||||||||||||    
T  34792067 gttgtacaaaagttgtacaaaaatgattgtacaaatatcattt 34792025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 206
Target Start/End: Complemental strand, 22422334 - 22422269
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttct 206  Q
    |||||| ||||||||  ||||  |||||||||||| |||||  |||||||||||||||||||||||    
T  22422334 agagtaatgatatttgaacaattattttggtacaacttttggtacaactttgttgttctctcttct 22422269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 328
Target Start/End: Original strand, 2165323 - 2165363
Alignment:
Q  288 aaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    |||||||||| |||||||||||||||||||||||| |||||    
T  2165323 aaagttgtacaaaaatggttgtacaaatatcatttctcttt 2165363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 328
Target Start/End: Original strand, 2176956 - 2176996
Alignment:
Q  288 aaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    |||||||||| |||||||||||||||||||||||| |||||    
T  2176956 aaagttgtacaaaaatggttgtacaaatatcatttctcttt 2176996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 28965873 - 28965913
Alignment:
Q  287 aaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    |||||||||| ||||||||||||||||||||||||| ||||    
T  28965873 aaaagttgtaacaaaatggttgtacaaatatcatttctctt 28965913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 608555 - 608618
Alignment:
Q  148 tgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||  ||||| |||||||||||| | ||| |||||| ||||||||||||||||| ||||    
T  608555 tgatatttgaacaactattttggtacaactgttgggacaaccttgttgttctctcttctcattg 608618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 328
Target Start/End: Original strand, 25127864 - 25127907
Alignment:
Q  285 acaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    |||||||||||  ||||||||||||||||||||||||| |||||    
T  25127864 acaaaagttgttacaaaatggttgtacaaatatcatttctcttt 25127907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 322
Target Start/End: Original strand, 25924897 - 25924932
Alignment:
Q  287 aaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||| |||||||||||||||||||||||||    
T  25924897 aaaagttgtagcaaaatggttgtacaaatatcattt 25924932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 328
Target Start/End: Original strand, 31934184 - 31934231
Alignment:
Q  281 ttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    |||| ||||| ||||| ||||||||||||||||||||||||| |||||    
T  31934184 ttgttcaaaaattgtatcaaaatggttgtacaaatatcatttgtcttt 31934231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 322
Target Start/End: Complemental strand, 16121200 - 16121166
Alignment:
Q  288 aaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||| ||||||||||||||||||||||||    
T  16121200 aaagttgtacaaaaatggttgtacaaatatcattt 16121166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 214
Target Start/End: Complemental strand, 17443006 - 17442933
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattgatc 214  Q
    ||||||||||| |||  |||||  ||||||||||| ||||| |||||| || ||||  ||||||||||||||||    
T  17443006 agagtagtgatttttgaacaactcttttggtacaacttttgggacaaccttattgtgttctcttcttattgatc 17442933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 19789109 - 19789149
Alignment:
Q  287 aaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    ||||||||||  |||||||||||||||||||||||| ||||    
T  19789109 aaaagttgtaataaaatggttgtacaaatatcatttctctt 19789149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 328
Target Start/End: Complemental strand, 27334899 - 27334855
Alignment:
Q  284 tacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    ||||||||||||  |||||| |||||||||||||||||| |||||    
T  27334899 tacaaaagttgtcacaaaatagttgtacaaatatcatttctcttt 27334855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 328
Target Start/End: Complemental strand, 27395639 - 27395595
Alignment:
Q  284 tacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    ||||||||||||  |||||| |||||||||||||||||| |||||    
T  27395639 tacaaaagttgtcacaaaatagttgtacaaatatcatttctcttt 27395595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 328
Target Start/End: Complemental strand, 32729934 - 32729886
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    |||||| |||||||||   |||||||||||||||||||||||| |||||    
T  32729934 gttgtataaaagttgtcagaaaatggttgtacaaatatcatttctcttt 32729886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0592 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 204
Target Start/End: Complemental strand, 1085 - 1031
Alignment:
Q  150 atattttgacaaccattttggtacaatttttgagacaactttgttgttctctctt 204  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||||||||||    
T  1085 atattttgacaactattttggtacaacttttgagataactttgttgttctctctt 1031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 4872 - 4914
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  4872 gttgtacaaaaattgtaccaaaatggttgtacaaatatcattt 4914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 145106 - 145064
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  145106 gttgtacaaaagttgtacaaaaatggttgtacaaatatcattt 145064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 145230 - 145161
Alignment:
Q  142 gagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattg 211  Q
    ||||||||||||||  |||||  ||||||||||| ||||| |||||| |||||||  |||||||||||||    
T  145230 gagtagtgatatttgaacaactcttttggtacaacttttgggacaaccttgttgtgttctcttcttattg 145161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0542 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 214
Target Start/End: Complemental strand, 3025 - 2952
Alignment:
Q  141 agagtagtgatattttgacaaccattttggtacaatttttgagacaactttgttgttctctcttcttattgatc 214  Q
    |||| ||||||||||||||||| ||||||||| ||| ||||||| || ||| ||||||| |||||| |||||||    
T  3025 agaggagtgatattttgacaactattttggtataatctttgagataatttttttgttctttcttctcattgatc 2952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 281 - 322
Target Start/End: Original strand, 1872 - 1913
Alignment:
Q  281 ttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    ||||||||||||| ||| ||||||||||||||||||||||||    
T  1872 ttgtacaaaagttatacaaaaatggttgtacaaatatcattt 1913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 328
Target Start/End: Complemental strand, 17086 - 17046
Alignment:
Q  288 aaagttgtaccaaaatggttgtacaaatatcatttttcttt 328  Q
    |||||||||| |||||||||||||||||||||||| |||||    
T  17086 aaagttgtacaaaaatggttgtacaaatatcatttctcttt 17046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 280 - 323
Target Start/End: Complemental strand, 48699 - 48656
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcatttt 323  Q
    ||||||||||| |||||| |||||| ||||||||||||||||||    
T  48699 gttgtacaaaaattgtacaaaaatgattgtacaaatatcatttt 48656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 60507 - 60467
Alignment:
Q  287 aaaagttgtaccaaaatggttgtacaaatatcatttttctt 327  Q
    ||||||||||  |||||||||||||||||||||||| ||||    
T  60507 aaaagttgtaataaaatggttgtacaaatatcatttctctt 60467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 322
Target Start/End: Complemental strand, 72410 - 72369
Alignment:
Q  281 ttgtacaaaagttgtaccaaaatggttgtacaaatatcattt 322  Q
    |||| ||||||||||  |||||||||||||||||||||||||    
T  72410 ttgttcaaaagttgttgcaaaatggttgtacaaatatcattt 72369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 324
Target Start/End: Original strand, 31324 - 31368
Alignment:
Q  280 gttgtacaaaagttgtaccaaaatggttgtacaaatatcattttt 324  Q
    ||||| ||||||||||  |||||||||||| ||||||||||||||    
T  31324 gttgtccaaaagttgttacaaaatggttgtccaaatatcattttt 31368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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