View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11745_high_108 (Length: 335)

Name: NF11745_high_108
Description: NF11745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11745_high_108
NF11745_high_108
[»] chr4 (17 HSPs)
chr4 (1-335)||(10499280-10499616)
chr4 (243-332)||(35157998-35158089)
chr4 (232-335)||(903866-903971)
chr4 (232-330)||(2361990-2362092)
chr4 (232-330)||(19482612-19482712)
chr4 (232-330)||(23293001-23293101)
chr4 (238-330)||(27706192-27706286)
chr4 (232-335)||(36635268-36635373)
chr4 (232-284)||(4157102-4157155)
chr4 (231-266)||(20633428-20633463)
chr4 (268-330)||(40481618-40481680)
chr4 (232-266)||(46084047-46084081)
chr4 (301-330)||(6485626-6485655)
chr4 (302-335)||(11931296-11931329)
chr4 (306-335)||(13134470-13134499)
chr4 (301-334)||(40179647-40179680)
chr4 (232-260)||(46160853-46160881)
[»] scaffold0053 (1 HSPs)
scaffold0053 (232-330)||(8742-8842)
[»] chr6 (21 HSPs)
chr6 (233-330)||(16766642-16766741)
chr6 (232-332)||(7938060-7938162)
chr6 (232-330)||(8776988-8777088)
chr6 (232-330)||(426529-426629)
chr6 (232-330)||(9107385-9107485)
chr6 (268-330)||(17841604-17841667)
chr6 (234-330)||(12696277-12696368)
chr6 (236-335)||(5732520-5732621)
chr6 (247-330)||(8365534-8365619)
chr6 (232-335)||(9027122-9027227)
chr6 (232-335)||(10888984-10889089)
chr6 (272-335)||(10842517-10842581)
chr6 (253-335)||(30866154-30866238)
chr6 (252-330)||(34595098-34595178)
chr6 (268-330)||(16833289-16833352)
chr6 (301-335)||(7086810-7086844)
chr6 (301-335)||(7151427-7151461)
chr6 (273-330)||(10770689-10770747)
chr6 (232-330)||(1681702-1681802)
chr6 (268-332)||(3398600-3398664)
chr6 (276-335)||(19040341-19040401)
[»] chr7 (17 HSPs)
chr7 (234-330)||(11061091-11061189)
chr7 (273-330)||(9408349-9408407)
chr7 (232-330)||(25481846-25481946)
chr7 (243-330)||(24339597-24339686)
chr7 (232-335)||(18213043-18213149)
chr7 (231-284)||(9778451-9778505)
chr7 (301-335)||(15902837-15902871)
chr7 (274-335)||(20549778-20549840)
chr7 (301-335)||(38143238-38143272)
chr7 (232-335)||(1433398-1433503)
chr7 (305-334)||(41020515-41020544)
chr7 (279-330)||(11831424-11831476)
chr7 (304-332)||(15680827-15680855)
chr7 (268-335)||(22868023-22868091)
chr7 (306-334)||(27093424-27093452)
chr7 (306-334)||(27184849-27184877)
chr7 (254-329)||(35861931-35862007)
[»] chr1 (32 HSPs)
chr1 (232-332)||(398778-398880)
chr1 (232-330)||(47989442-47989541)
chr1 (233-332)||(1486722-1486823)
chr1 (232-330)||(42359464-42359564)
chr1 (232-330)||(22881631-22881725)
chr1 (232-335)||(38503264-38503369)
chr1 (268-330)||(46348398-46348461)
chr1 (273-330)||(1705007-1705065)
chr1 (273-330)||(31672910-31672968)
chr1 (244-332)||(34298392-34298482)
chr1 (233-328)||(9103585-9103682)
chr1 (232-330)||(41877485-41877585)
chr1 (231-297)||(10577784-10577851)
chr1 (268-330)||(18556471-18556534)
chr1 (232-330)||(29144373-29144472)
chr1 (273-327)||(30359374-30359429)
chr1 (268-330)||(48450602-48450665)
chr1 (277-330)||(113289-113343)
chr1 (301-335)||(14332652-14332686)
chr1 (268-330)||(14359537-14359599)
chr1 (301-335)||(16164325-16164359)
chr1 (273-330)||(22515902-22515960)
chr1 (232-266)||(24334776-24334810)
chr1 (306-335)||(12713337-12713366)
chr1 (306-335)||(12717428-12717457)
chr1 (302-334)||(5898277-5898309)
chr1 (232-330)||(6612186-6612286)
chr1 (301-329)||(15323178-15323206)
chr1 (268-335)||(17754292-17754360)
chr1 (231-267)||(25934571-25934607)
chr1 (273-332)||(36878447-36878507)
chr1 (273-332)||(37598818-37598877)
[»] chr8 (19 HSPs)
chr8 (231-330)||(2572071-2572172)
chr8 (273-332)||(15816142-15816202)
chr8 (268-330)||(8343297-8343360)
chr8 (231-319)||(22651919-22652009)
chr8 (232-330)||(29510319-29510419)
chr8 (232-330)||(22197757-22197857)
chr8 (232-291)||(24413615-24413675)
chr8 (272-335)||(39954289-39954353)
chr8 (268-330)||(20873050-20873113)
chr8 (275-330)||(24613509-24613564)
chr8 (268-330)||(36450769-36450832)
chr8 (247-319)||(13436990-13437064)
chr8 (301-335)||(14731727-14731761)
chr8 (231-335)||(24362212-24362318)
chr8 (232-332)||(44067460-44067562)
chr8 (301-330)||(8342987-8343016)
chr8 (232-277)||(24669384-24669429)
chr8 (232-264)||(3951612-3951644)
chr8 (233-335)||(36934615-36934719)
[»] chr2 (16 HSPs)
chr2 (232-335)||(34784992-34785097)
chr2 (232-330)||(21374714-21374809)
chr2 (232-330)||(30335361-30335461)
chr2 (234-335)||(21616708-21616811)
chr2 (268-335)||(23718007-23718075)
chr2 (268-335)||(24105679-24105747)
chr2 (268-335)||(28677890-28677958)
chr2 (268-335)||(30527605-30527673)
chr2 (272-335)||(31808062-31808126)
chr2 (268-330)||(20539689-20539752)
chr2 (268-330)||(30717545-30717608)
chr2 (301-331)||(36409641-36409671)
chr2 (306-335)||(2665898-2665927)
chr2 (306-335)||(20922938-20922967)
chr2 (232-331)||(31283992-31284093)
chr2 (301-333)||(40361766-40361798)
[»] chr3 (26 HSPs)
chr3 (232-330)||(21479068-21479162)
chr3 (232-327)||(10335304-10335401)
chr3 (253-330)||(8587036-8587115)
chr3 (232-330)||(14747511-14747606)
chr3 (232-330)||(15796309-15796409)
chr3 (233-327)||(16000034-16000130)
chr3 (231-332)||(34307793-34307896)
chr3 (268-330)||(55401056-55401119)
chr3 (273-330)||(10268501-10268559)
chr3 (301-335)||(15314886-15314920)
chr3 (232-327)||(3164043-3164140)
chr3 (274-330)||(4987306-4987363)
chr3 (274-328)||(10954939-10954994)
chr3 (232-330)||(35994753-35994852)
chr3 (232-319)||(750644-750734)
chr3 (301-335)||(7928465-7928499)
chr3 (301-335)||(11313810-11313844)
chr3 (301-331)||(25064924-25064954)
chr3 (301-335)||(32804550-32804584)
chr3 (301-335)||(49505164-49505198)
chr3 (301-330)||(1509554-1509583)
chr3 (244-331)||(23915915-23916004)
chr3 (301-333)||(4201411-4201443)
chr3 (252-330)||(28917965-28918045)
chr3 (230-266)||(32400775-32400811)
chr3 (279-330)||(34910309-34910361)
[»] scaffold0027 (1 HSPs)
scaffold0027 (232-330)||(46626-46726)
[»] scaffold0021 (1 HSPs)
scaffold0021 (232-330)||(130426-130526)
[»] chr5 (21 HSPs)
chr5 (232-330)||(21522694-21522794)
chr5 (232-330)||(21533260-21533360)
chr5 (268-330)||(14674250-14674313)
chr5 (274-330)||(6247609-6247666)
chr5 (232-331)||(6770487-6770588)
chr5 (245-330)||(21191071-21191158)
chr5 (247-332)||(22013373-22013460)
chr5 (274-332)||(43564870-43564927)
chr5 (231-330)||(19579644-19579745)
chr5 (237-327)||(13287417-13287509)
chr5 (268-335)||(27144444-27144512)
chr5 (232-309)||(15382421-15382500)
chr5 (276-330)||(33178014-33178069)
chr5 (273-330)||(21351920-21351978)
chr5 (273-330)||(31084309-31084367)
chr5 (232-332)||(36642775-36642876)
chr5 (273-330)||(39698527-39698585)
chr5 (273-330)||(42893346-42893404)
chr5 (243-330)||(21541985-21542074)
chr5 (232-261)||(32426938-32426967)
chr5 (301-334)||(35017052-35017085)
[»] scaffold0003 (1 HSPs)
scaffold0003 (252-331)||(241558-241639)
[»] scaffold0103 (1 HSPs)
scaffold0103 (268-330)||(51792-51855)
[»] scaffold0171 (2 HSPs)
scaffold0171 (232-332)||(23371-23466)
scaffold0171 (274-332)||(23497-23557)
[»] scaffold0223 (1 HSPs)
scaffold0223 (268-330)||(20153-20216)
[»] scaffold0246 (1 HSPs)
scaffold0246 (268-330)||(19557-19619)
[»] scaffold0227 (1 HSPs)
scaffold0227 (279-332)||(7324-7378)
[»] scaffold0306 (1 HSPs)
scaffold0306 (247-330)||(13359-13444)
[»] scaffold0152 (1 HSPs)
scaffold0152 (247-330)||(21883-21968)
[»] scaffold0011 (1 HSPs)
scaffold0011 (301-330)||(17764-17793)
[»] scaffold1528 (1 HSPs)
scaffold1528 (268-335)||(1016-1084)
[»] scaffold0361 (1 HSPs)
scaffold0361 (279-330)||(14522-14574)
[»] scaffold0018 (1 HSPs)
scaffold0018 (268-330)||(178833-178897)


Alignment Details
Target: chr4 (Bit Score: 264; Significance: 1e-147; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 1 - 335
Target Start/End: Complemental strand, 10499616 - 10499280
Alignment:
Q  1 cacaccccttcacaaattcaacagcccattcaaacaaagnnnnnnn-gttttttaatagaaaaataattaaatatattttttagttctctaattatccaa 99  Q
    ||||||||||||||||||||||| | ||||||| |||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10499616 cacaccccttcacaaattcaacaactcattcaaccaaagaaaaataagttttttaatagaaaaataattaaatatattttttagttctctaattatccaa 10499517  T
Q  100 gtaaacaattgagctcaaatgattaatgaattt-aaactcttagttaaagacaaattgtttcgaaatatccaaattcgaattctaactaaaaaattcttt 198  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10499516 gtaaacaattgagctcaaatgattaatgaattttaaactcttagttaaagacaaattgtttcgaaatatccaaattcgaattctaactaaaaaaatcttt 10499417  T
Q  199 ggaaaaatgctcgatcaaagtttggattactcgctatgaagcatggatacggacacggacaccagacatacactgacactgacacaccgacacatctaaa 298  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||    
T  10499416 ggaaaaatgctcggtcaaagtttggattactcgctatgaagcatggatacagatacggacaccagacacacactgacactgacacaccgacacatctaaa 10499317  T
Q  299 acttgaaaaaatcacataatttagtgtaattatatgt 335  Q
    |||||| ||||||||||||||||||||||||||||||    
T  10499316 acttgagaaaatcacataatttagtgtaattatatgt 10499280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 243 - 332
Target Start/End: Complemental strand, 35158089 - 35157998
Alignment:
Q  243 ggatacggacacggacaccagacata-cactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaattata 332  Q
    ||||||||||||||||||| |||| | ||| ||||||||||| ||||| || |||| || ||| ||||||||||||||||||||||||||||    
T  35158089 ggatacggacacggacaccggacacaacacggacactgacacgccgacgcaactaataatttggaaaaatcacataatttagtgtaattata 35157998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 232 - 335
Target Start/End: Original strand, 903866 - 903971
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagacataca-ctgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 329  Q
    |||||||||| |||||||||||||| | ||||||||| | | ||||||||||||||| |||   ||| || |||| |||||||||||||| |||||||||    
T  903866 ctatgaagcacggatacggacacgggcgccagacataaaacggacactgacacaccggcaccgttaataatttgagaaaatcacataattcagtgtaatt 903965  T
Q  330 atatgt 335  Q
    ||||||    
T  903966 atatgt 903971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 330
Target Start/End: Complemental strand, 2362092 - 2361990
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagacatac---actgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaa 327  Q
    |||||||| | ||||||||||||| ||| |||||| ||   | ||||| ||||||||||||||| |||| || |||||||||| ||||||||||||||||    
T  2362092 ctatgaagtacggatacggacacgaacatcagacacacgacattgacattgacacaccgacacagctaataatttgaaaaaattacataatttagtgtaa 2361993  T
Q  328 tta 330  Q
    |||    
T  2361992 tta 2361990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 330
Target Start/End: Original strand, 19482612 - 19482712
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 329  Q
    |||||||||| ||||||| |||| |||||||||||  |||| ||||||||||| |||||||| |||| || ||||||| |||||||||||  ||||||||    
T  19482612 ctatgaagcacggatacgaacacagacaccagacacgacacagacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaatt 19482711  T
Q  330 a 330  Q
    |    
T  19482712 a 19482712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 330
Target Start/End: Complemental strand, 23293101 - 23293001
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 329  Q
    ||||||||||  |||||||||||||||||| ||||  |||| |||| |||||| |||||||| |||| || ||||||||||||||||||| ||| |||||    
T  23293101 ctatgaagcacagatacggacacggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtataatt 23293002  T
Q  330 a 330  Q
    |    
T  23293001 a 23293001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 238 - 330
Target Start/End: Complemental strand, 27706286 - 27706192
Alignment:
Q  238 agcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    |||| ||||||||||||||||||||||||  |||  |||||||||||  |||||||  ||| || || |||||||||||||||||||||||||||    
T  27706286 agcacggatacggacacggacaccagacacgacagggacactgacacgtcgacacaattaataatttaaaaaaatcacataatttagtgtaatta 27706192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 335
Target Start/End: Original strand, 36635268 - 36635373
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 329  Q
    |||||||||||||||| |||||| |||||| ||||  || | ||||||||||| || ||||  |||| || |||| |||||||||||||| |||||||||    
T  36635268 ctatgaagcatggataaggacacagacaccggacacgactcggacactgacacgccaacaccactaataatttgagaaaatcacataattcagtgtaatt 36635367  T
Q  330 atatgt 335  Q
    ||||||    
T  36635368 atatgt 36635373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 4157102 - 4157155
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagaca-tacactgacactgacaca 284  Q
    |||||||||| ||||||||||||||||||||||||  |||| ||||||||||||    
T  4157102 ctatgaagcacggatacggacacggacaccagacacgacacagacactgacaca 4157155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 231 - 266
Target Start/End: Original strand, 20633428 - 20633463
Alignment:
Q  231 gctatgaagcatggatacggacacggacaccagaca 266  Q
    ||||||||||| ||||||||||||||||||||||||    
T  20633428 gctatgaagcacggatacggacacggacaccagaca 20633463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 330
Target Start/End: Original strand, 40481618 - 40481680
Alignment:
Q  268 acactgacactgacacaccgacacatctaaaacttgaaaaaatcacataatttagtgtaatta 330  Q
    |||||||||||||||| |||| ||| |||| | ||  ||||||||||||||| ||||||||||    
T  40481618 acactgacactgacacgccgatacaactaataatttgaaaaatcacataattcagtgtaatta 40481680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 266
Target Start/End: Complemental strand, 46084081 - 46084047
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagaca 266  Q
    |||||||||||||||||||||||||||||| ||||    
T  46084081 ctatgaagcatggatacggacacggacaccggaca 46084047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 330
Target Start/End: Complemental strand, 6485655 - 6485626
Alignment:
Q  301 ttgaaaaaatcacataatttagtgtaatta 330  Q
    ||||||||||||||||||||||||||||||    
T  6485655 ttgaaaaaatcacataatttagtgtaatta 6485626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 335
Target Start/End: Original strand, 11931296 - 11931329
Alignment:
Q  302 tgaaaaaatcacataatttagtgtaattatatgt 335  Q
    |||||||||||||||||||||||||| |||||||    
T  11931296 tgaaaaaatcacataatttagtgtaaatatatgt 11931329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 335
Target Start/End: Original strand, 13134470 - 13134499
Alignment:
Q  306 aaaatcacataatttagtgtaattatatgt 335  Q
    ||||||||||||||||||||||||||||||    
T  13134470 aaaatcacataatttagtgtaattatatgt 13134499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 334
Target Start/End: Complemental strand, 40179680 - 40179647
Alignment:
Q  301 ttgaaaaaatcacataatttagtgtaattatatg 334  Q
    ||||||||||||||||||| ||||||||||||||    
T  40179680 ttgaaaaaatcacataattcagtgtaattatatg 40179647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 260
Target Start/End: Original strand, 46160853 - 46160881
Alignment:
Q  232 ctatgaagcatggatacggacacggacac 260  Q
    |||||||||||||||||||||||||||||    
T  46160853 ctatgaagcatggatacggacacggacac 46160881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 232 - 330
Target Start/End: Original strand, 8742 - 8842
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 329  Q
    |||||||||||||||||||||||||||||| ||||  |||| ||||||||||| |||||||| |||| || |||||||||||| || |||||||||||||    
T  8742 ctatgaagcatggatacggacacggacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcatattatttagtgtaatt 8841  T
Q  330 a 330  Q
    |    
T  8842 a 8842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 9e-21; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 233 - 330
Target Start/End: Original strand, 16766642 - 16766741
Alignment:
Q  233 tatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    ||||||||||||||||||||||||||||| ||||  |||  ||||||||||| |||||||| |||| || ||||||||||||||||||| ||||||||||    
T  16766642 tatgaagcatggatacggacacggacaccggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 16766741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 232 - 332
Target Start/End: Original strand, 7938060 - 7938162
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 329  Q
    |||||||||| ||||||||||||||||||| ||||  |||  ||||||||||| |||||||| |||| || |||||||||||| ||||||||||||||||    
T  7938060 ctatgaagcacggatacggacacggacaccggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaatt 7938159  T
Q  330 ata 332  Q
    |||    
T  7938160 ata 7938162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 232 - 330
Target Start/End: Complemental strand, 8777088 - 8776988
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 329  Q
    |||||||||| ||||||||||||||||| | ||||  |||| ||||||||||| |||||||| |||| || |||||||||||||| |||| |||||||||    
T  8777088 ctatgaagcacggatacggacacggacaacggacacgacacggacactgacacgccgacacaactaataatttgaaaaaatcacaaaattcagtgtaatt 8776989  T
Q  330 a 330  Q
    |    
T  8776988 a 8776988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 330
Target Start/End: Complemental strand, 426629 - 426529
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 329  Q
    ||||||||||||||||| |||||||| ||| ||||  |||| ||||||||||| ||||||||  ||| || ||||||||||||||||||| | |||||||    
T  426629 ctatgaagcatggatacagacacggataccggacacgacacggacactgacacgccgacacagttaataatttgaaaaaatcacataattaaatgtaatt 426530  T
Q  330 a 330  Q
    |    
T  426529 a 426529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 330
Target Start/End: Complemental strand, 9107485 - 9107385
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 329  Q
    |||||||||| |||||| |||||||||||| ||||  |||| |||||| |||| |||||||| |||| || |||||||||||||| |||| |||||||||    
T  9107485 ctatgaagcacggatactgacacggacaccggacacgacacggacactaacacgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaatt 9107386  T
Q  330 a 330  Q
    |    
T  9107385 a 9107385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 268 - 330
Target Start/End: Complemental strand, 17841667 - 17841604
Alignment:
Q  268 acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    |||| ||||||||||| |||||||| |||| || ||||||||||||||||||||||||||||||    
T  17841667 acacggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaatta 17841604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 330
Target Start/End: Original strand, 12696277 - 12696368
Alignment:
Q  234 atgaagcatggatacggacacggacaccagacatacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    |||||||| |||||||||||||||||| |      ||| ||||||||||| |||||||| |||| || |||||||||| |||||||| ||||||||||    
T  12696277 atgaagcacggatacggacacggacacga------cacggacactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaatta 12696368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 236 - 335
Target Start/End: Complemental strand, 5732621 - 5732520
Alignment:
Q  236 gaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaattatat 333  Q
    ||||||||||||| |||||||||||  ||||  |||  ||||||||||| |||||||   ||| || |||| ||||||||||| ||||||||||||||||    
T  5732621 gaagcatggatacagacacggacactggacacgacatggacactgacacgccgacaccgttaataatttgagaaaatcacatattttagtgtaattatat 5732522  T
Q  334 gt 335  Q
    ||    
T  5732521 gt 5732520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 330
Target Start/End: Complemental strand, 8365619 - 8365534
Alignment:
Q  247 acggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    ||||| ||||||||||||||  |||| ||||||||||| |||||||| |||| || ||||||| |||||||||||  |||||||||    
T  8365619 acggatacggacaccagacacgacacggacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaatta 8365534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 335
Target Start/End: Original strand, 9027122 - 9027227
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 329  Q
    ||||||||||  ||||||||||||||| || ||||  |||| ||||||||||| |||||||  |||| || |||| | ||||||||||||  ||||||||    
T  9027122 ctatgaagcaccgatacggacacggactccggacacgacacggacactgacacgccgacaccgctaataatttgagataatcacataattccgtgtaatt 9027221  T
Q  330 atatgt 335  Q
    ||||||    
T  9027222 atatgt 9027227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 335
Target Start/End: Complemental strand, 10889089 - 10888984
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 329  Q
    |||||||||| |||| | |||||||||| || |||| |||| ||||| ||||||  |||||  |||| || |||| |||||||||||||||||||| |||    
T  10889089 ctatgaagcacggatgcagacacggacatcaaacatgacacggacaccgacacatagacaccgctaataatttgataaaatcacataatttagtgtgatt 10888990  T
Q  330 atatgt 335  Q
    ||||||    
T  10888989 atatgt 10888984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 335
Target Start/End: Original strand, 10842517 - 10842581
Alignment:
Q  272 tgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaattatatgt 335  Q
    |||||| ||||| |||||||  |||| || |||||||||||||||||||||||||||| ||||||    
T  10842517 tgacacggacacgccgacaccgctaataatttgaaaaaatcacataatttagtgtaatcatatgt 10842581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 335
Target Start/End: Complemental strand, 30866238 - 30866154
Alignment:
Q  253 acggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaattatatgt 335  Q
    ||||||||| ||||| |||||||||| |||||||| ||||  |||| || |||| |||||||||||||| | |||||||||||||    
T  30866238 acggacaccggacatgacactgacaccgacacaccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgt 30866154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 330
Target Start/End: Original strand, 34595098 - 34595178
Alignment:
Q  252 cacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    |||||||||| ||||  |||| |||| |||||| |||||||| |||| || ||||||||||||||||||| ||||||||||    
T  34595098 cacggacaccggacacgacacggacaatgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaatta 34595178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 330
Target Start/End: Original strand, 16833289 - 16833352
Alignment:
Q  268 acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    |||| ||||||||||| |||||||| |||| || |||||||||||||||| || ||||||||||    
T  16833289 acacagacactgacacgccgacacaactaataatttgaaaaaatcacatacttcagtgtaatta 16833352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 335
Target Start/End: Original strand, 7086810 - 7086844
Alignment:
Q  301 ttgaaaaaatcacataatttagtgtaattatatgt 335  Q
    |||| ||||||||||||||||||||||||||||||    
T  7086810 ttgagaaaatcacataatttagtgtaattatatgt 7086844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 335
Target Start/End: Original strand, 7151427 - 7151461
Alignment:
Q  301 ttgaaaaaatcacataatttagtgtaattatatgt 335  Q
    ||||||||||||||||||| |||||||||||||||    
T  7151427 ttgaaaaaatcacataattaagtgtaattatatgt 7151461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 330
Target Start/End: Complemental strand, 10770747 - 10770689
Alignment:
Q  273 gacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    ||||||||||| || ||||| |||| || ||||||||||||||||||| ||||||||||    
T  10770747 gacactgacacgccaacacaactaataatttgaaaaaatcacataattcagtgtaatta 10770689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 330
Target Start/End: Original strand, 1681702 - 1681802
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 329  Q
    |||||||||| |||||| ||||| ||||||  |||  ||||  ||||| |||| |||||||| |||| || ||||||||||||| ||||| |||||||||    
T  1681702 ctatgaagcacggatacagacacagacaccgaacacgacacatacactaacacgccgacacaactaataatttgaaaaaatcacgtaattcagtgtaatt 1681801  T
Q  330 a 330  Q
    |    
T  1681802 a 1681802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 332
Target Start/End: Original strand, 3398600 - 3398664
Alignment:
Q  268 acactgacactgacacaccgacacatctaaaacttgaaaaaatcacataatttagtgtaattata 332  Q
    |||| ||||||||||| |||||||| |||| | ||  |||||||| |||||| ||||||||||||    
T  3398600 acacggacactgacacgccgacacagctaataatttgaaaaatcatataattcagtgtaattata 3398664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 335
Target Start/End: Original strand, 19040341 - 19040401
Alignment:
Q  276 actgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaattatatgt 335  Q
    |||||||| |||||||  |||| || |||| |||||||||||||| |||||||||||||||    
T  19040341 actgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgt 19040401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 8e-18; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 234 - 330
Target Start/End: Complemental strand, 11061189 - 11061091
Alignment:
Q  234 atgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    |||||||| ||||||||||||||||| | || |  |||| |||||||||||||||||||| |||| || ||||||||||||||||||||||| ||||||    
T  11061189 atgaagcacggatacggacacggacatcggatacgacacggacactgacacaccgacacagctaataatttgaaaaaatcacataatttagtataatta 11061091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 330
Target Start/End: Complemental strand, 9408407 - 9408349
Alignment:
Q  273 gacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    ||||||||||||||||||||  ||| || ||||||||||||||||||||||||||||||    
T  9408407 gacactgacacaccgacacaattaataatttgaaaaaatcacataatttagtgtaatta 9408349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 330
Target Start/End: Original strand, 25481846 - 25481946
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagacata-cactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 329  Q
    |||||||||| |||||| |||||||||| | |||| | ||  |||| |||||| |||||||| |||| || ||||||||||||||||||| |||||||||    
T  25481846 ctatgaagcacggatacagacacggacatcggacacaacatggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatt 25481945  T
Q  330 a 330  Q
    |    
T  25481946 a 25481946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 330
Target Start/End: Original strand, 24339597 - 24339686
Alignment:
Q  243 ggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    ||||||||| ||||||||| ||||  |||  |||| |||||| |||||||| |||| || ||||||||||||||||||| ||||||||||    
T  24339597 ggatacggatacggacaccggacacgacatggacattgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 24339686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 335
Target Start/End: Complemental strand, 18213149 - 18213043
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaaaacttg--aaaaaatcacataatttagtgtaat 328  Q
    ||||||||||  |||||| ||||| ||||||||||  |||| |||||||| || |||||||| ||||   ||   | |||||||||||||||||||||||    
T  18213149 ctatgaagcacagatacgaacacgaacaccagacacgacacggacactgatacgccgacacaactaattttttttagaaaatcacataatttagtgtaat 18213050  T
Q  329 tatatgt 335  Q
    |||||||    
T  18213049 tatatgt 18213043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 284
Target Start/End: Original strand, 9778451 - 9778505
Alignment:
Q  231 gctatgaagcatggatacggacacggacaccagaca-tacactgacactgacaca 284  Q
    ||||||||||| ||||||||||||||||||| ||||  |||| ||||||||||||    
T  9778451 gctatgaagcacggatacggacacggacaccggacacgacacggacactgacaca 9778505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 335
Target Start/End: Original strand, 15902837 - 15902871
Alignment:
Q  301 ttgaaaaaatcacataatttagtgtaattatatgt 335  Q
    |||| ||||||||||||||||||||||||||||||    
T  15902837 ttgataaaatcacataatttagtgtaattatatgt 15902871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 335
Target Start/End: Original strand, 20549778 - 20549840
Alignment:
Q  274 acactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaattatatgt 335  Q
    ||||||||||||||||||  |||| || |||| |||||||| ||||| |||||||||||||||    
T  20549778 acactgacacaccgacaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgt 20549840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 335
Target Start/End: Original strand, 38143238 - 38143272
Alignment:
Q  301 ttgaaaaaatcacataatttagtgtaattatatgt 335  Q
    ||||||||||||||||||||| |||||||||||||    
T  38143238 ttgaaaaaatcacataatttaatgtaattatatgt 38143272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 335
Target Start/End: Original strand, 1433398 - 1433503
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 329  Q
    |||||||||| |||||||| ||||||||||  |||  |||| |||| |||||| |||||||   ||| || |||| |||||||||| |||| ||||||||    
T  1433398 ctatgaagcacggatacgggcacggacaccgaacacgacacggacattgacacgccgacaccgttaataatttgagaaaatcacatcatttggtgtaatt 1433497  T
Q  330 atatgt 335  Q
    ||||||    
T  1433498 atatgt 1433503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 334
Target Start/End: Original strand, 41020515 - 41020544
Alignment:
Q  305 aaaaatcacataatttagtgtaattatatg 334  Q
    ||||||||||||||||||||||||||||||    
T  41020515 aaaaatcacataatttagtgtaattatatg 41020544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 330
Target Start/End: Original strand, 11831424 - 11831476
Alignment:
Q  279 gacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    |||||| ||||||| |||| || |||||||||||| |||||||||||||||||    
T  11831424 gacacatcgacacaactaataatttgaaaaaatcatataatttagtgtaatta 11831476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 332
Target Start/End: Original strand, 15680827 - 15680855
Alignment:
Q  304 aaaaaatcacataatttagtgtaattata 332  Q
    |||||||||||||||||||||||||||||    
T  15680827 aaaaaatcacataatttagtgtaattata 15680855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 335
Target Start/End: Original strand, 22868023 - 22868091
Alignment:
Q  268 acactgacactgacacaccgacacatctaaaact-tgaaaaaatcacataatttagtgtaattatatgt 335  Q
    |||| ||||||||||| |||||||  |||| | | ||| |||||||||||||| |||||||||||||||    
T  22868023 acaccgacactgacacgccgacaccactaataatatgagaaaatcacataattcagtgtaattatatgt 22868091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 334
Target Start/End: Complemental strand, 27093452 - 27093424
Alignment:
Q  306 aaaatcacataatttagtgtaattatatg 334  Q
    |||||||||||||||||||||||||||||    
T  27093452 aaaatcacataatttagtgtaattatatg 27093424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 334
Target Start/End: Original strand, 27184849 - 27184877
Alignment:
Q  306 aaaatcacataatttagtgtaattatatg 334  Q
    |||||||||||||||||||||||||||||    
T  27184849 aaaatcacataatttagtgtaattatatg 27184877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 35861931 - 35862007
Alignment:
Q  254 cggacaccagacatacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 329  Q
    ||||||| | ||| ||||| ||||| |||| |||||||| |||| || ||||||||||||||||||| | |||||||    
T  35861931 cggacacgacacagacactaacactaacacgccgacacaactaataatttgaaaaaatcacataattcaatgtaatt 35862007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 8e-18; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 232 - 332
Target Start/End: Complemental strand, 398880 - 398778
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 329  Q
    |||||||||| |||||||||| |||||||| ||||  |||| ||||||||||| |||||||  |||| || ||||||||||||||||||| |||||||||    
T  398880 ctatgaagcacggatacggacgcggacaccggacacgacacggacactgacacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaatt 398781  T
Q  330 ata 332  Q
    |||    
T  398780 ata 398778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 232 - 330
Target Start/End: Original strand, 47989442 - 47989541
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaaaacttgaaaaaatcacataatttagtgtaatta 330  Q
    ||||||||||||||||| |||||||| ||||||||  |||| ||||||||||| ||||||||   | || || |||||||||||||||| ||||||||||    
T  47989442 ctatgaagcatggatacagacacggataccagacacgacacagacactgacacgccgacacaataataatttaaaaaaatcacataattcagtgtaatta 47989541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 233 - 332
Target Start/End: Complemental strand, 1486823 - 1486722
Alignment:
Q  233 tatgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    ||||||||||||||||||||||||| ||| || |  |||| || |||||||| | |||||| |||| || ||||||||||||||||||| ||||||||||    
T  1486823 tatgaagcatggatacggacacggataccggatacgacacggatactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaatta 1486724  T
Q  331 ta 332  Q
    ||    
T  1486723 ta 1486722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 330
Target Start/End: Complemental strand, 42359564 - 42359464
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagacata-cactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 329  Q
    |||||||||| ||||||||||||| |||||  ||| | ||| ||||||||||| | ||||||||||| || |||||||||||||| |||| |||||||||    
T  42359564 ctatgaagcacggatacggacacgaacaccgtacacaacacggacactgacacgctgacacatctaataatttgaaaaaatcacaaaattcagtgtaatt 42359465  T
Q  330 a 330  Q
    |    
T  42359464 a 42359464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 330
Target Start/End: Complemental strand, 22881725 - 22881631
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagacatacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    |||||||||| |||||  |||||||||||| ||||      ||||||||||| |||||||| |||| || ||||||||||||||||||||||||||||||    
T  22881725 ctatgaagcacggatatagacacggacaccggacac-----gacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaatta 22881631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 335
Target Start/End: Original strand, 38503264 - 38503369
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 329  Q
    |||||| ||| ||||||||||||||||||  ||||| |||| |||||| ||||||||||||  |||| || |||| ||||||| ||| || |||||||||    
T  38503264 ctatgatgcacggatacggacacggacacgggacatgacacggacactaacacaccgacaccgctaataatttgagaaaatcatatatttcagtgtaatt 38503363  T
Q  330 atatgt 335  Q
    ||||||    
T  38503364 atatgt 38503369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 330
Target Start/End: Complemental strand, 46348461 - 46348398
Alignment:
Q  268 acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    |||| ||||||||||| |||||||| |||| || |||||||||||| |||||||||||||||||    
T  46348461 acacggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaatta 46348398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 330
Target Start/End: Complemental strand, 1705065 - 1705007
Alignment:
Q  273 gacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    ||||| ||||||||||||||||||| || ||||||||||||||||||| || |||||||    
T  1705065 gacaccgacacaccgacacatctaataatttgaaaaaatcacataattcagggtaatta 1705007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 330
Target Start/End: Complemental strand, 31672968 - 31672910
Alignment:
Q  273 gacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    |||||||||||||||||||| |||| || ||||||||||||| ||||| ||||||||||    
T  31672968 gacactgacacaccgacacagctaataatttgaaaaaatcacttaattcagtgtaatta 31672910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 332
Target Start/End: Original strand, 34298392 - 34298482
Alignment:
Q  244 gatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaattata 332  Q
    ||||| |||||| ||||||||||  |||| || ||||||||||||||||  |||| || |||| |||||||||||||| ||||||||||||    
T  34298392 gatacagacacgtacaccagacacgacacggaaactgacacaccgacaccactaataatttgagaaaatcacataattcagtgtaattata 34298482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 233 - 328
Target Start/End: Original strand, 9103585 - 9103682
Alignment:
Q  233 tatgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaat 328  Q
    ||||||||| ||||| ||||||| ||||| ||||  || | ||||||||||| ||||||||  ||| || ||||||||||||||||||||||| ||||    
T  9103585 tatgaagcacggatatggacacgaacacctgacaggactcggacactgacacgccgacacagttaataatttgaaaaaatcacataatttagtttaat 9103682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 330
Target Start/End: Complemental strand, 41877585 - 41877485
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 329  Q
    |||||||||| ||||||||||| ||| ||||||||  |||| |||||||  || |||||||  |||| || |||| ||||| ||||||||||||||||||    
T  41877585 ctatgaagcacggatacggacatggataccagacacgacacagacactggtacgccgacaccgctaataatttgagaaaattacataatttagtgtaatt 41877486  T
Q  330 a 330  Q
    |    
T  41877485 a 41877485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 10577851 - 10577784
Alignment:
Q  231 gctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa 297  Q
    ||||||||||| ||||||||||||||||||| ||||  |||| ||||| ||||| |||||||| ||||    
T  10577851 gctatgaagcacggatacggacacggacaccggacacgacacggacaccgacacgccgacacagctaa 10577784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 330
Target Start/End: Complemental strand, 18556534 - 18556471
Alignment:
Q  268 acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    |||| ||||||||||| |||||||| |||| || ||||||| ||||||||||||| ||||||||    
T  18556534 acacggacactgacacgccgacacagctaataatttgaaaatatcacataatttaatgtaatta 18556471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 330
Target Start/End: Complemental strand, 29144472 - 29144373
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagacatacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    ||||||||||||||||||||||| || || | ||  ||||||||||||| || |||||||| |||| || |||||||||  | |||||  ||||||||||    
T  29144472 ctatgaagcatggatacggacacagatacgacacggacactgacactgatacgccgacacagctaataatttgaaaaaaatagataatgcagtgtaatta 29144373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 30359374 - 30359429
Alignment:
Q  273 gacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaa 327  Q
    ||||||||||||||| |||| || | || |||||||||||||||||||||||||||    
T  30359374 gacactgacacaccggcacaactgataatttgaaaaaatcacataatttagtgtaa 30359429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 330
Target Start/End: Complemental strand, 48450665 - 48450602
Alignment:
Q  268 acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    |||| ||||||||||| || ||||| |||| || |||||||||| |||||||||||||||||||    
T  48450665 acacggacactgacacgccaacacagctaataatttgaaaaaataacataatttagtgtaatta 48450602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 330
Target Start/End: Original strand, 113289 - 113343
Alignment:
Q  277 ctgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    ||||||| |||||||| |||| || ||||||||||||||||||| ||||||||||    
T  113289 ctgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 113343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 335
Target Start/End: Complemental strand, 14332686 - 14332652
Alignment:
Q  301 ttgaaaaaatcacataatttagtgtaattatatgt 335  Q
    |||| ||||||||||||||||||||||||||||||    
T  14332686 ttgagaaaatcacataatttagtgtaattatatgt 14332652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 330
Target Start/End: Complemental strand, 14359599 - 14359537
Alignment:
Q  268 acactgacactgacacaccgacacatctaaaacttgaaaaaatcacataatttagtgtaatta 330  Q
    |||| ||||| ||||| |||||||| |||| | ||  ||||||||||||||||||||||||||    
T  14359599 acacagacacggacacgccgacacagctaataatttgaaaaatcacataatttagtgtaatta 14359537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 335
Target Start/End: Complemental strand, 16164359 - 16164325
Alignment:
Q  301 ttgaaaaaatcacataatttagtgtaattatatgt 335  Q
    ||||||||||||||||||||| |||||||||||||    
T  16164359 ttgaaaaaatcacataatttaatgtaattatatgt 16164325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 330
Target Start/End: Complemental strand, 22515960 - 22515902
Alignment:
Q  273 gacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    ||||| ||||| | |||||| |||| || ||||||||||||||||||||||||||||||    
T  22515960 gacacggacacgcagacacagctaataatttgaaaaaatcacataatttagtgtaatta 22515902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 266
Target Start/End: Complemental strand, 24334810 - 24334776
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagaca 266  Q
    |||||||||||||||||||||||||||||| ||||    
T  24334810 ctatgaagcatggatacggacacggacaccggaca 24334776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 335
Target Start/End: Complemental strand, 12713366 - 12713337
Alignment:
Q  306 aaaatcacataatttagtgtaattatatgt 335  Q
    ||||||||||||||||||||||||||||||    
T  12713366 aaaatcacataatttagtgtaattatatgt 12713337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 335
Target Start/End: Complemental strand, 12717457 - 12717428
Alignment:
Q  306 aaaatcacataatttagtgtaattatatgt 335  Q
    ||||||||||||||||||||||||||||||    
T  12717457 aaaatcacataatttagtgtaattatatgt 12717428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 334
Target Start/End: Complemental strand, 5898309 - 5898277
Alignment:
Q  302 tgaaaaaatcacataatttagtgtaattatatg 334  Q
    |||||||||||||||||| ||||||||||||||    
T  5898309 tgaaaaaatcacataattcagtgtaattatatg 5898277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 330
Target Start/End: Complemental strand, 6612286 - 6612186
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 329  Q
    ||||||||||  |||||||||||| ||||| ||||  |||| |||| |||||| |||| |||  ||| || |||||||||| |||||||| |||||||||    
T  6612286 ctatgaagcacagatacggacacgaacaccggacacgacacggacaatgacacgccgatacagttaataatttgaaaaaattacataattcagtgtaatt 6612187  T
Q  330 a 330  Q
    |    
T  6612186 a 6612186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 329
Target Start/End: Original strand, 15323178 - 15323206
Alignment:
Q  301 ttgaaaaaatcacataatttagtgtaatt 329  Q
    |||||||||||||||||||||||||||||    
T  15323178 ttgaaaaaatcacataatttagtgtaatt 15323206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 335
Target Start/End: Original strand, 17754292 - 17754360
Alignment:
Q  268 acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaattatatgt 335  Q
    |||| ||| |||||||||||||||  |||| || |||||||||| |||||||| ||||||| |||||||    
T  17754292 acacagacgctgacacaccgacaccgctaataatttgaaaaaattacataattcagtgtaactatatgt 17754360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 267
Target Start/End: Original strand, 25934571 - 25934607
Alignment:
Q  231 gctatgaagcatggatacggacacggacaccagacat 267  Q
    ||||||||||| ||||||||||||||||||| |||||    
T  25934571 gctatgaagcacggatacggacacggacaccggacat 25934607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 36878447 - 36878507
Alignment:
Q  273 gacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaattata 332  Q
    ||||||||||| |||||||  |||| || |||| |||||||||||||| ||||||||||||    
T  36878447 gacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattata 36878507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 332
Target Start/End: Original strand, 37598818 - 37598877
Alignment:
Q  273 gacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaattata 332  Q
    ||||||||||| |||||||| |||| || |||||||||||||| |||| ||||||||||||    
T  37598818 gacactgacacgccgacacaactaataatttgaaaaaatcaca-aattcagtgtaattata 37598877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 3e-17; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 231 - 330
Target Start/End: Complemental strand, 2572172 - 2572071
Alignment:
Q  231 gctatgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaat 328  Q
    ||||||||||||||||||||||||||||||  ||||  |||| || || |||||  ||||||| |||| || ||||||||||||||||||||||||||||    
T  2572172 gctatgaagcatggatacggacacggacactggacacgacacggataccgacacgtcgacacacctaataatttgaaaaaatcacataatttagtgtaat 2572073  T
Q  329 ta 330  Q
    ||    
T  2572072 ta 2572071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 15816202 - 15816142
Alignment:
Q  273 gacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaattata 332  Q
    ||||||||||| |||||||| |||| || ||||||||||||||||||||||||||||||||    
T  15816202 gacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattata 15816142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 268 - 330
Target Start/End: Original strand, 8343297 - 8343360
Alignment:
Q  268 acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    |||||||||| |||||||||||| | |||| || ||||||||||||||||||||||||||||||    
T  8343297 acactgacaccgacacaccgacatagctaataatttgaaaaaatcacataatttagtgtaatta 8343360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 319
Target Start/End: Original strand, 22651919 - 22652009
Alignment:
Q  231 gctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatt 319  Q
    ||||||||| | |||||||||||| |||||| ||||  |||| ||||||||||| |||||||| |||| || |||||||||||||||||||    
T  22651919 gctatgaagtacggatacggacactgacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcacataatt 22652009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 330
Target Start/End: Complemental strand, 29510419 - 29510319
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 329  Q
    |||||||||| |||||| |||| ||||||| ||||  |||| ||||||||||| |||||||| |||| || |||||||||||||| |||| ||| |||||    
T  29510419 ctatgaagcacggatactgacatggacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcacaaaattcagtataatt 29510320  T
Q  330 a 330  Q
    |    
T  29510319 a 29510319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 330
Target Start/End: Complemental strand, 22197857 - 22197757
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 329  Q
    |||||||||| ||||   |||||||||||| ||||  |||| |||||| |||| || ||||| |||| || |||||||| ||||||||||||||||||||    
T  22197857 ctatgaagcacggatctagacacggacaccggacacgacacagacactaacacgccaacacagctaataatttgaaaaattcacataatttagtgtaatt 22197758  T
Q  330 a 330  Q
    |    
T  22197757 a 22197757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 291
Target Start/End: Complemental strand, 24413675 - 24413615
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacac 291  Q
    |||||||||| ||||||||||||||||||||||||  |||| |||||||||| || |||||    
T  24413675 ctatgaagcacggatacggacacggacaccagacacgacacggacactgacatactgacac 24413615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 335
Target Start/End: Complemental strand, 39954353 - 39954289
Alignment:
Q  272 tgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaattatatgt 335  Q
    |||||| ||||| |||||||  |||| || |||| ||||||||||||||||||||||||||||||    
T  39954353 tgacaccgacacgccgacaccgctaataatttgagaaaatcacataatttagtgtaattatatgt 39954289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 330
Target Start/End: Original strand, 20873050 - 20873113
Alignment:
Q  268 acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    |||| ||||||||||| |||||| |  ||| || ||||||||||||||||||||||||||||||    
T  20873050 acacggacactgacacgccgacatagataataatttgaaaaaatcacataatttagtgtaatta 20873113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 275 - 330
Target Start/End: Original strand, 24613509 - 24613564
Alignment:
Q  275 cactgacacaccgacacatctaaaacttgaaaaaatcacataatttagtgtaatta 330  Q
    |||||||||||||||||| |||| | ||  ||||||||||||||| ||||||||||    
T  24613509 cactgacacaccgacacagctaataatttgaaaaatcacataattaagtgtaatta 24613564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 330
Target Start/End: Complemental strand, 36450832 - 36450769
Alignment:
Q  268 acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    |||| ||||||||||| |||||||| |||| || |||||||||||||| |||| ||||||||||    
T  36450832 acacggacactgacacgccgacacaactaataatttgaaaaaatcacagaattcagtgtaatta 36450769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 319
Target Start/End: Complemental strand, 13437064 - 13436990
Alignment:
Q  247 acggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatt 319  Q
    ||||||| ||||||| ||||| |||  ||||||||||| |||||||| |||| || |||||||||||||||||||    
T  13437064 acggacatggacaccggacatgacatggacactgacacgccgacacagctaataatttgaaaaaatcacataatt 13436990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 335
Target Start/End: Original strand, 14731727 - 14731761
Alignment:
Q  301 ttgaaaaaatcacataatttagtgtaattatatgt 335  Q
    |||| ||||||||||||||||||||||||||||||    
T  14731727 ttgagaaaatcacataatttagtgtaattatatgt 14731761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 335
Target Start/End: Complemental strand, 24362318 - 24362212
Alignment:
Q  231 gctatgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaat 328  Q
    |||||||||||  |||||||| ||||||||| || |  |||| ||||| ||||| |||||||  |||| || |||| | |||||||||||| ||||||||    
T  24362318 gctatgaagcacagatacggatacggacaccggatacgacacagacaccgacacgccgacaccgctaataatttgagagaatcacataattcagtgtaat 24362219  T
Q  329 tatatgt 335  Q
    |||||||    
T  24362218 tatatgt 24362212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 332
Target Start/End: Original strand, 44067460 - 44067562
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 329  Q
    |||||||||| ||| || |||||||||||||||||  |||| ||||||||||| |||||||   ||| || |||| ||||| |||||||  |||||||||    
T  44067460 ctatgaagcacggacacagacacggacaccagacaccacaccgacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaatt 44067559  T
Q  330 ata 332  Q
    |||    
T  44067560 ata 44067562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 330
Target Start/End: Original strand, 8342987 - 8343016
Alignment:
Q  301 ttgaaaaaatcacataatttagtgtaatta 330  Q
    ||||||||||||||||||||||||||||||    
T  8342987 ttgaaaaaatcacataatttagtgtaatta 8343016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 277
Target Start/End: Original strand, 24669384 - 24669429
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagacatacactgacac 277  Q
    |||| |||||||||||||||||||||||| | ||| ||||||||||    
T  24669384 ctataaagcatggatacggacacggacacgacacagacactgacac 24669429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 264
Target Start/End: Complemental strand, 3951644 - 3951612
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccaga 264  Q
    |||||||||| ||||||||||||||||||||||    
T  3951644 ctatgaagcacggatacggacacggacaccaga 3951612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 335
Target Start/End: Original strand, 36934615 - 36934719
Alignment:
Q  233 tatgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaaaactt-gaaaaaatcacataatttagtgtaatta 330  Q
    ||||||||||||||||||| ||  |||||| |||  |||| |||||| ||||  ||||||  |||| | || ||||||||||||||||| | ||||||||    
T  36934615 tatgaagcatggatacggatacaaacaccaaacacgacacggacactaacacgtcgacaccgctaataattcgaaaaaatcacataattcattgtaatta 36934714  T
Q  331 tatgt 335  Q
    |||||    
T  36934715 tatgt 36934719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 232 - 335
Target Start/End: Complemental strand, 34785097 - 34784992
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 329  Q
    ||||||||||  ||||||||||||||| |||||||  |||| |||||||||||||||||||| ||||    || | ||||||||||||||||||||||||    
T  34785097 ctatgaagcacagatacggacacggaccccagacacgacacggacactgacacaccgacacaactaatttttttagaaaatcacataatttagtgtaatt 34784998  T
Q  330 atatgt 335  Q
    ||||||    
T  34784997 atatgt 34784992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 330
Target Start/End: Complemental strand, 21374809 - 21374714
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagacatacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    |||||||||| ||||||||||||||||||| |    |||| |||||| |||| |||||||| |||| || |||||||||| |||||||| ||||||||||    
T  21374809 ctatgaagcacggatacggacacggacaccgg----acacggacactaacacgccgacacagctaataatttgaaaaaattacataattcagtgtaatta 21374714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 330
Target Start/End: Original strand, 30335361 - 30335461
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 329  Q
    |||||||||| |||||||||||||||   ||||||  |||| ||||||  ||| |||||||| |||| || |||||||||| ||||||||||||||||||    
T  30335361 ctatgaagcacggatacggacacggatctcagacacgacacggacactagcacgccgacacaactaataatttgaaaaaatgacataatttagtgtaatt 30335460  T
Q  330 a 330  Q
    |    
T  30335461 a 30335461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 335
Target Start/End: Original strand, 21616708 - 21616811
Alignment:
Q  234 atgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaattat 331  Q
    |||||||| |||||||||||| |||||  ||||  |||| ||||| ||||| |||||||  |||| || |||| |||||||||||||| |||||||||||    
T  21616708 atgaagcacggatacggacacagacacatgacacgacacggacacggacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattat 21616807  T
Q  332 atgt 335  Q
    ||||    
T  21616808 atgt 21616811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 335
Target Start/End: Original strand, 23718007 - 23718075
Alignment:
Q  268 acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaattatatgt 335  Q
    |||| |||||||||||||||||||  |||| || |||| ||| |||||||||| |||||||||||||||    
T  23718007 acacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgt 23718075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 335
Target Start/End: Original strand, 24105679 - 24105747
Alignment:
Q  268 acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaattatatgt 335  Q
    |||| |||||||||||||||||||  |||| || |||| ||| |||||||||| |||||||||||||||    
T  24105679 acacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgt 24105747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 335
Target Start/End: Original strand, 28677890 - 28677958
Alignment:
Q  268 acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaattatatgt 335  Q
    ||||||||||||  || |||||||  |||| || ||||||||||||||||||| |||||||||||||||    
T  28677890 acactgacactggaacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgt 28677958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 335
Target Start/End: Complemental strand, 30527673 - 30527605
Alignment:
Q  268 acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaattatatgt 335  Q
    ||||||||||||||||||| ||||   ||| || |||| ||||||| ||||||||||||||||||||||    
T  30527673 acactgacactgacacacccacactgttaataatttgagaaaatcatataatttagtgtaattatatgt 30527605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 335
Target Start/End: Original strand, 31808062 - 31808126
Alignment:
Q  272 tgacactgacacaccgacacatctaaaacttgaa-aaaatcacataatttagtgtaattatatgt 335  Q
    ||||||||||||||||||||  |||| | || || |||||||||||||| |||||||||||||||    
T  31808062 tgacactgacacaccgacaccgctaataatttaacaaaatcacataattcagtgtaattatatgt 31808126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 330
Target Start/End: Complemental strand, 20539752 - 20539689
Alignment:
Q  268 acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    |||| |||||||||||  ||||||| |||| || |||||||||||| |||||||||||||||||    
T  20539752 acacggacactgacacgtcgacacagctaataatttgaaaaaatcatataatttagtgtaatta 20539689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 330
Target Start/End: Complemental strand, 30717608 - 30717545
Alignment:
Q  268 acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    |||| |||||||||| ||||||| | |||| || ||||||||||||||||||| ||||||||||    
T  30717608 acacggacactgacaaaccgacaaagctaataatttgaaaaaatcacataattcagtgtaatta 30717545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 331
Target Start/End: Complemental strand, 36409671 - 36409641
Alignment:
Q  301 ttgaaaaaatcacataatttagtgtaattat 331  Q
    |||||||||||||||||||||||||||||||    
T  36409671 ttgaaaaaatcacataatttagtgtaattat 36409641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 335
Target Start/End: Complemental strand, 2665927 - 2665898
Alignment:
Q  306 aaaatcacataatttagtgtaattatatgt 335  Q
    ||||||||||||||||||||||||||||||    
T  2665927 aaaatcacataatttagtgtaattatatgt 2665898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 335
Target Start/End: Complemental strand, 20922967 - 20922938
Alignment:
Q  306 aaaatcacataatttagtgtaattatatgt 335  Q
    ||||||||||||||||||||||||||||||    
T  20922967 aaaatcacataatttagtgtaattatatgt 20922938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 331
Target Start/End: Original strand, 31283992 - 31284093
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 329  Q
    ||||||||||  |||||||||||||||||| ||||| ||||  ||||| |||| |||||||  |||| || |||| |||||||||||||  | |||||||    
T  31283992 ctatgaagcacagatacggacacggacaccggacataacacgtacacttacacgccgacactgctaataatttgagaaaatcacataatccattgtaatt 31284091  T
Q  330 at 331  Q
    ||    
T  31284092 at 31284093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 333
Target Start/End: Complemental strand, 40361798 - 40361766
Alignment:
Q  301 ttgaaaaaatcacataatttagtgtaattatat 333  Q
    |||||||||| ||||||||||||||||||||||    
T  40361798 ttgaaaaaattacataatttagtgtaattatat 40361766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 5e-16; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 232 - 330
Target Start/End: Original strand, 21479068 - 21479162
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagacatacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    |||||||||||||||||||||||||||||| ||||      ||||||||||| |||||||| |||| || |||||||||||||| |||| ||||||||||    
T  21479068 ctatgaagcatggatacggacacggacaccggaca-----cgacactgacacgccgacacagctaataatttgaaaaaatcacacaattcagtgtaatta 21479162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 232 - 327
Target Start/End: Complemental strand, 10335401 - 10335304
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaa 327  Q
    |||||||||| ||||||| ||||||||||| ||||  |||| ||||||||||| |||||||| |||| || |||||||| ||||||| ||||||||||    
T  10335401 ctatgaagcacggatacgaacacggacaccggacacgacacggacactgacacgccgacacaactaataatttgaaaaagtcacatattttagtgtaa 10335304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 330
Target Start/End: Complemental strand, 8587115 - 8587036
Alignment:
Q  253 acggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    ||||||||| ||||| |||| ||||||||||| ||||||||||||  || ||||||||||||||||||| ||||||||||    
T  8587115 acggacaccggacatgacacggacactgacacgccgacacatctagtaatttgaaaaaatcacataattaagtgtaatta 8587036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 330
Target Start/End: Original strand, 14747511 - 14747606
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagacatacactgacactgacacaccgacacatctaa-aacttgaaaa-aatcacataatttagtgtaatt 329  Q
    |||||||||| ||||||||| ||||||||| ||||      ||||||||||| |||||||| |||| || ||||||| ||||||||||||||||||||||    
T  14747511 ctatgaagcacggatacggatacggacaccggacac-----gacactgacacgccgacacagctaataatttgaaaaaaatcacataatttagtgtaatt 14747605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 232 - 330
Target Start/End: Complemental strand, 15796409 - 15796309
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 329  Q
    |||||||||| ||||| ||||||||||||| ||||  |||| |||| |||||| ||||||||  ||| || |||||||||||| |||||| |||||||||    
T  15796409 ctatgaagcacggatatggacacggacaccggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcatataattcagtgtaatt 15796310  T
Q  330 a 330  Q
    |    
T  15796309 a 15796309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 233 - 327
Target Start/End: Complemental strand, 16000130 - 16000034
Alignment:
Q  233 tatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaa 327  Q
    ||||||||| |||||||||||||||||||  |||  |||| ||||||||||| |||||||| |||| || || ||||||| |||||||| |||||||    
T  16000130 tatgaagcacggatacggacacggacaccgaacacgacacagacactgacacgccgacacaactaataatttaaaaaaataacataattcagtgtaa 16000034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 332
Target Start/End: Complemental strand, 34307896 - 34307793
Alignment:
Q  231 gctatgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaat 328  Q
    ||||||||||||||||||||||||| ||||| ||||| |||| |||||  |||| | |||||  |||| || |||| ||||||||||| || ||||||||    
T  34307896 gctatgaagcatggatacggacacgaacaccggacatgacacagacacgaacacgctgacaccgctaataatttgagaaaatcacatatttcagtgtaat 34307797  T
Q  329 tata 332  Q
    ||||    
T  34307796 tata 34307793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 330
Target Start/End: Original strand, 55401056 - 55401119
Alignment:
Q  268 acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    |||| |||||||| || |||||||| |||| || ||||||||||||||||||||||||||||||    
T  55401056 acacggacactgatacgccgacacaactaataatttgaaaaaatcacataatttagtgtaatta 55401119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 330
Target Start/End: Complemental strand, 10268559 - 10268501
Alignment:
Q  273 gacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    ||||||||||| ||||||||  ||| || ||||||||||||||||||||||||||||||    
T  10268559 gacactgacacgccgacacagttaataatttgaaaaaatcacataatttagtgtaatta 10268501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 335
Target Start/End: Complemental strand, 15314920 - 15314886
Alignment:
Q  301 ttgaaaaaatcacataatttagtgtaattatatgt 335  Q
    |||||||||||||||||||||||||||||||||||    
T  15314920 ttgaaaaaatcacataatttagtgtaattatatgt 15314886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 232 - 327
Target Start/End: Complemental strand, 3164140 - 3164043
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaa 327  Q
    |||||||||| |||||| |||||||||||| ||||  |||| |||| || |||  ||||||| |||| || ||||||||||||||||||| |||||||    
T  3164140 ctatgaagcacggatacagacacggacaccggacacgacacggacaatggcacgtcgacacagctaataatttgaaaaaatcacataattcagtgtaa 3164043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 330
Target Start/End: Complemental strand, 4987363 - 4987306
Alignment:
Q  274 acactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    |||||||||| |||||||| |||| || ||||||||||||||||||| ||||||||||    
T  4987363 acactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 4987306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 328
Target Start/End: Original strand, 10954939 - 10954994
Alignment:
Q  274 acactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaat 328  Q
    |||||||||| |||||||| |||| || ||||||||||||||||||| ||||||||    
T  10954939 acactgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaat 10954994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 330
Target Start/End: Complemental strand, 35994852 - 35994753
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaaaacttgaaaaaatcacataatttagtgtaatta 330  Q
    |||||||||| ||||||||||| ||||||| ||||  |||  |||| |||||  |||||||| |||| | ||  ||||||||||||||| ||||||||||    
T  35994852 ctatgaagcacggatacggacatggacaccggacacgacatggacaatgacaagccgacacagctaataatttgaaaaatcacataattcagtgtaatta 35994753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 319
Target Start/End: Complemental strand, 750734 - 750644
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagaca-tacactgacac-tgacacaccgacacatctaa-aacttgaaaaaatcacataatt 319  Q
    |||||||||| ||||||||||||||||||| ||||  |||| ||||| ||||||  ||||||| |||| || ||||||| |||||||||||    
T  750734 ctatgaagcacggatacggacacggacaccggacacgacacggacacttgacacggcgacacaactaataatttgaaaatatcacataatt 750644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 335
Target Start/End: Original strand, 7928465 - 7928499
Alignment:
Q  301 ttgaaaaaatcacataatttagtgtaattatatgt 335  Q
    ||||||||||||||||||| |||||||||||||||    
T  7928465 ttgaaaaaatcacataattcagtgtaattatatgt 7928499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 335
Target Start/End: Complemental strand, 11313844 - 11313810
Alignment:
Q  301 ttgaaaaaatcacataatttagtgtaattatatgt 335  Q
    |||| ||||||||||||||||||||||||||||||    
T  11313844 ttgagaaaatcacataatttagtgtaattatatgt 11313810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 331
Target Start/End: Original strand, 25064924 - 25064954
Alignment:
Q  301 ttgaaaaaatcacataatttagtgtaattat 331  Q
    |||||||||||||||||||||||||||||||    
T  25064924 ttgaaaaaatcacataatttagtgtaattat 25064954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 335
Target Start/End: Complemental strand, 32804584 - 32804550
Alignment:
Q  301 ttgaaaaaatcacataatttagtgtaattatatgt 335  Q
    |||| ||||||||||||||||||||||||||||||    
T  32804584 ttgagaaaatcacataatttagtgtaattatatgt 32804550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 335
Target Start/End: Complemental strand, 49505198 - 49505164
Alignment:
Q  301 ttgaaaaaatcacataatttagtgtaattatatgt 335  Q
    |||| ||||||||||||||||||||||||||||||    
T  49505198 ttgagaaaatcacataatttagtgtaattatatgt 49505164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 330
Target Start/End: Original strand, 1509554 - 1509583
Alignment:
Q  301 ttgaaaaaatcacataatttagtgtaatta 330  Q
    ||||||||||||||||||||||||||||||    
T  1509554 ttgaaaaaatcacataatttagtgtaatta 1509583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 331
Target Start/End: Original strand, 23915915 - 23916004
Alignment:
Q  244 gatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaattat 331  Q
    |||||||||||||||||| ||||  |||| || |||||||  || ||||| |||| ||||||||||||||||| |||| | |||||||||    
T  23915915 gatacggacacggacaccggacacgacacagaaactgacatgccaacacagctaacaacttgaaaaaatcacacaattaaatgtaattat 23916004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 333
Target Start/End: Original strand, 4201411 - 4201443
Alignment:
Q  301 ttgaaaaaatcacataatttagtgtaattatat 333  Q
    ||||||||||||||||||| |||||||||||||    
T  4201411 ttgaaaaaatcacataattaagtgtaattatat 4201443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 330
Target Start/End: Original strand, 28917965 - 28918045
Alignment:
Q  252 cacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    |||||||||| ||||  |||| || |||||||| |||||| | |||| || ||||||||||||||||||| ||||||||||    
T  28917965 cacggacaccggacacgacacggaaactgacacgccgacatagctaataatttgaaaaaatcacataattcagtgtaatta 28918045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 266
Target Start/End: Complemental strand, 32400811 - 32400775
Alignment:
Q  230 cgctatgaagcatggatacggacacggacaccagaca 266  Q
    |||||||||||||||||||||||||| ||||| ||||    
T  32400811 cgctatgaagcatggatacggacacgaacaccggaca 32400775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 330
Target Start/End: Original strand, 34910309 - 34910361
Alignment:
Q  279 gacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    ||||| |||||||| |||| || ||||||||||||||||||| ||||||||||    
T  34910309 gacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaatta 34910361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 330
Target Start/End: Original strand, 46626 - 46726
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 329  Q
    |||||||||| ||||||||||||||||| | ||||  |||| |||| |||||| ||||||||  ||| || ||||||||||||||||||| |||||||||    
T  46626 ctatgaagcacggatacggacacggacatcggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcacataattcagtgtaatt 46725  T
Q  330 a 330  Q
    |    
T  46726 a 46726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 330
Target Start/End: Original strand, 130426 - 130526
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 329  Q
    |||||||||||||||||||||||||||||| ||||  |||| |||| |||||  ||||||||  ||| |  ||||||||||||||||||| |||||||||    
T  130426 ctatgaagcatggatacggacacggacaccggacacgacacggacaatgacaagccgacacagttaatagtttgaaaaaatcacataattcagtgtaatt 130525  T
Q  330 a 330  Q
    |    
T  130526 a 130526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 330
Target Start/End: Original strand, 21522694 - 21522794
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 329  Q
    |||||||||| |||||||||||||| |||| ||||  |||| ||||||||||| |||||||| |||| || || ||||||| |||||||| |||||||||    
T  21522694 ctatgaagcacggatacggacacggtcaccggacacgacacggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaatt 21522793  T
Q  330 a 330  Q
    |    
T  21522794 a 21522794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 330
Target Start/End: Original strand, 21533260 - 21533360
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 329  Q
    |||||||||| |||||||||||||| |||| ||||  |||| ||||||||||| |||||||| |||| || || ||||||| |||||||| |||||||||    
T  21533260 ctatgaagcacggatacggacacggtcaccggacacgacacggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaatt 21533359  T
Q  330 a 330  Q
    |    
T  21533360 a 21533360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 268 - 330
Target Start/End: Original strand, 14674250 - 14674313
Alignment:
Q  268 acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    |||| ||||||||||| |||||||| |||| || ||||||||||||||||||||||||||||||    
T  14674250 acacggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaatta 14674313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 330
Target Start/End: Original strand, 6247609 - 6247666
Alignment:
Q  274 acactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    |||||||||| ||||||||||||| || ||||||||||||||||||| ||||||||||    
T  6247609 acactgacacgccgacacatctaataatttgaaaaaatcacataattcagtgtaatta 6247666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 331
Target Start/End: Original strand, 6770487 - 6770588
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 329  Q
    |||||||||| ||||||||| |||||||||  |||| |||| ||||||||||||| |||||| |||| || || | |||||||||||||| |||||| ||    
T  6770487 ctatgaagcacggatacggatacggacaccgaacatgacacggacactgacacactgacacaactaataatttaagaaaatcacataattcagtgtactt 6770586  T
Q  330 at 331  Q
    ||    
T  6770587 at 6770588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 330
Target Start/End: Complemental strand, 21191158 - 21191071
Alignment:
Q  245 atacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    |||||||||| |||||| ||||  |||| ||||||||||  |||||||| |||| || ||||||||||||||||||| ||||||||||    
T  21191158 atacggacactgacaccggacacgacacggacactgacatgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 21191071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 247 - 332
Target Start/End: Original strand, 22013373 - 22013460
Alignment:
Q  247 acggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaattata 332  Q
    ||||| ||||||||| ||||  |||| ||||||||||| |||||||| |||| || ||| |||||| |||||||||||||||||||||    
T  22013373 acggatacggacaccggacacgacacggacactgacacgccgacacagctaataatttggaaaaattacataatttagtgtaattata 22013460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 274 - 332
Target Start/End: Original strand, 43564870 - 43564927
Alignment:
Q  274 acactgacacaccgacacatctaaaacttgaaaaaatcacataatttagtgtaattata 332  Q
    |||||||||| |||||||||| | || ||| ||||||||||||||||||||||||||||    
T  43564870 acactgacacgccgacacatc-ataatttggaaaaatcacataatttagtgtaattata 43564927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 330
Target Start/End: Original strand, 19579644 - 19579745
Alignment:
Q  231 gctatgaagcatggatacggacacggacaccagacata-cactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaat 328  Q
    ||||||||||| ||||||| |||| |||||| || | | ||| |||||||| || |||||||| |||| || |||| ||||||||||||||||||| |||    
T  19579644 gctatgaagcacggatacgtacaccgacaccggatacaacacggacactgatacgccgacacagctaataatttgagaaaatcacataatttagtgcaat 19579743  T
Q  329 ta 330  Q
    ||    
T  19579744 ta 19579745  T

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Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 327
Target Start/End: Complemental strand, 13287509 - 13287417
Alignment:
Q  237 aagcatggatacggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaa 327  Q
    ||||| ||||||||||||||||||| ||||  |||| |||||| ||||  |||||||  ||| || ||||||||||||||||||| |||||||    
T  13287509 aagcacggatacggacacggacaccggacacgacacggacactaacacgtcgacacagataataatttgaaaaaatcacataattcagtgtaa 13287417  T

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Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 335
Target Start/End: Original strand, 27144444 - 27144512
Alignment:
Q  268 acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaattatatgt 335  Q
    |||| ||||||||||| |||||||  |||| || ||||  |||||||||||||||||||||||||||||    
T  27144444 acacagacactgacacgccgacaccgctaataatttgaggaaatcacataatttagtgtaattatatgt 27144512  T

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Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 309
Target Start/End: Original strand, 15382421 - 15382500
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa-aacttgaaaaaa 309  Q
    |||||||||| ||||||||||||||||||| ||||  |||| |||| |||||| |||||||| |||| || |||||||||    
T  15382421 ctatgaagcacggatacggacacggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaa 15382500  T

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Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 330
Target Start/End: Original strand, 33178014 - 33178069
Alignment:
Q  276 actgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    |||||||| |||||||| |||| || || |||||||||||||||||||||||||||    
T  33178014 actgacacgccgacacaactaataatttaaaaaaatcacataatttagtgtaatta 33178069  T

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Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 330
Target Start/End: Complemental strand, 21351978 - 21351920
Alignment:
Q  273 gacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    |||||||||||||||||||| |||| || | |||||| |||||||||| ||||||||||    
T  21351978 gacactgacacaccgacacaactaataattggaaaaagtcacataattcagtgtaatta 21351920  T

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Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 330
Target Start/End: Original strand, 31084309 - 31084367
Alignment:
Q  273 gacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    ||||||||||| |||||||| |||| || ||||||||||||||||||| | ||||||||    
T  31084309 gacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatgtaatta 31084367  T

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Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 332
Target Start/End: Complemental strand, 36642876 - 36642775
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatt 329  Q
    ||||||||||||||||||||||  |||||| ||||  |||| ||||||||||| ||||||||  ||| || |||||||| | ||||| |||||||||| |    
T  36642876 ctatgaagcatggatacggaca-agacaccggacacgacacggacactgacacgccgacacagttaataatttgaaaaagtgacatattttagtgtaaat 36642778  T
Q  330 ata 332  Q
    |||    
T  36642777 ata 36642775  T

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Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 330
Target Start/End: Original strand, 39698527 - 39698585
Alignment:
Q  273 gacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    ||||||||||| | |||||| |||| || ||||||||||||||||||| ||||||||||    
T  39698527 gacactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaatta 39698585  T

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Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 330
Target Start/End: Original strand, 42893346 - 42893404
Alignment:
Q  273 gacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    ||||| |||||||||||||| |||| || ||||||||||||||||||  ||||||||||    
T  42893346 gacacggacacaccgacacagctaataatttgaaaaaatcacataatccagtgtaatta 42893404  T

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Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 330
Target Start/End: Original strand, 21541985 - 21542074
Alignment:
Q  243 ggatacggacacggacaccagaca-tacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    ||||||||||||||||||||||||  |||| |||| |||||  |||||||| |||| || || |||| || |||||||| ||||||||||    
T  21541985 ggatacggacacggacaccagacacgacacagacattgacatgccgacacaactaataatttaaaaagataacataattcagtgtaatta 21542074  T

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Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 261
Target Start/End: Complemental strand, 32426967 - 32426938
Alignment:
Q  232 ctatgaagcatggatacggacacggacacc 261  Q
    ||||||||||||||||||||||||||||||    
T  32426967 ctatgaagcatggatacggacacggacacc 32426938  T

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Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 334
Target Start/End: Original strand, 35017052 - 35017085
Alignment:
Q  301 ttgaaaaaatcacataatttagtgtaattatatg 334  Q
    |||| |||||||||||||||||||||||||||||    
T  35017052 ttgagaaaatcacataatttagtgtaattatatg 35017085  T

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Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 331
Target Start/End: Original strand, 241558 - 241639
Alignment:
Q  252 cacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaattat 331  Q
    |||||||||| ||||  |||| ||||||||||| |||||||| |||| || ||| |||||||||||||||||||||||||||    
T  241558 cacggacaccggacacgacacggacactgacacgccgacacagctaataatttggaaaaatcacataatttagtgtaattat 241639  T

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Target: scaffold0103 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 330
Target Start/End: Original strand, 51792 - 51855
Alignment:
Q  268 acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    |||| ||||||||||| |||||||| |||| || ||||||||||||||||||| ||||||||||    
T  51792 acacggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 51855  T

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Target: scaffold0171 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 332
Target Start/End: Original strand, 23371 - 23466
Alignment:
Q  232 ctatgaagcatggatacggacacggacaccagacatacactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    |||||||||| ||||||||||||||||||       |||| ||||||||||| ||||||||  ||| ||||  |||||||||||||||| ||||||||||    
T  23371 ctatgaagcacggatacggacacggacac------gacacagacactgacacgccgacacagataataactcaaaaaaatcacataattcagtgtaatta 23464  T

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Target: scaffold0171; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 332
Target Start/End: Original strand, 23497 - 23557
Alignment:
Q  274 acactgacacaccgacacatctaa-aacttgaaaa-aatcacataatttagtgtaattata 332  Q
    |||||||||||||||||||  ||| ||||| |||| |||||||||||| ||||||||||||    
T  23497 acactgacacaccgacacagttaataacttaaaaaaaatcacataattcagtgtaattata 23557  T

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Target: scaffold0223 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 330
Target Start/End: Original strand, 20153 - 20216
Alignment:
Q  268 acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    |||| |||| |||||| |||||||| |||| || ||||||||||||||||||| ||||||||||    
T  20153 acacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 20216  T

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Target: scaffold0246 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 330
Target Start/End: Original strand, 19557 - 19619
Alignment:
Q  268 acactgacactgacacaccgacacatctaaaacttgaaaaaatcacataatttagtgtaatta 330  Q
    |||||||||||||||| |||| ||| |||| | ||  ||||||||||||||| ||||||||||    
T  19557 acactgacactgacacgccgatacaactaataatttgaaaaatcacataattcagtgtaatta 19619  T

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Target: scaffold0227 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 332
Target Start/End: Complemental strand, 7378 - 7324
Alignment:
Q  279 gacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaattata 332  Q
    ||||| |||||||| |||| || ||| ||||||||||||||||||||||||||||    
T  7378 gacacgccgacacaactaataatttggaaaaatcacataatttagtgtaattata 7324  T

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Target: scaffold0306 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 330
Target Start/End: Original strand, 13359 - 13444
Alignment:
Q  247 acggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    ||||| ||||||||| || || |||| ||||||||||| |||||||| |||| || |||| |||||||||||||| |||| |||||    
T  13359 acggatacggacaccggagatgacacggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaatta 13444  T

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Target: scaffold0152 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 330
Target Start/End: Complemental strand, 21968 - 21883
Alignment:
Q  247 acggacacggacaccagacat-acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    ||||| ||||||||| || || |||| ||||||||||| |||||||| |||| || |||| |||||||||||||| |||| |||||    
T  21968 acggatacggacaccggagatgacacggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaatta 21883  T

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Target: scaffold0011 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 330
Target Start/End: Complemental strand, 17793 - 17764
Alignment:
Q  301 ttgaaaaaatcacataatttagtgtaatta 330  Q
    ||||||||||||||||||||||||||||||    
T  17793 ttgaaaaaatcacataatttagtgtaatta 17764  T

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Target: scaffold1528 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 335
Target Start/End: Original strand, 1016 - 1084
Alignment:
Q  268 acactgacactgacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaattatatgt 335  Q
    |||| ||| |||||||||||||||  |||| || |||||||||| |||||||| ||||||| |||||||    
T  1016 acacagacgctgacacaccgacaccgctaataatttgaaaaaattacataattcagtgtaactatatgt 1084  T

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Target: scaffold0361 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 330
Target Start/End: Original strand, 14522 - 14574
Alignment:
Q  279 gacacaccgacacatctaa-aacttgaaaaaatcacataatttagtgtaatta 330  Q
    ||||| |||||||| |||| || ||||||||||||||||||| ||||||||||    
T  14522 gacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaatta 14574  T

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Target: scaffold0018 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 330
Target Start/End: Complemental strand, 178897 - 178833
Alignment:
Q  268 acactgacactgacacaccgacacatctaa-aacttgaaaaaatca-cataatttagtgtaatta 330  Q
    |||| ||||||||||| |||||||| |||| || |||||||||||| ||||||| ||||||||||    
T  178897 acacggacactgacacgccgacacaactaataatttgaaaaaatcatcataattcagtgtaatta 178833  T

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