View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11745_high_129 (Length: 298)
Name: NF11745_high_129
Description: NF11745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11745_high_129 |
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Alignment Details
Target: chr3 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 19 - 287
Target Start/End: Original strand, 54074599 - 54074867
Alignment:
| Q |
19 |
ttatttgctgcattttctcttcatctctctcgtcacgccgtttctggttggagccctgattacgacctagacgatcgtccatggaagctaaacgcaaaaa |
118 |
Q |
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| T |
54074599 |
ttatttgctgcattttctcttcatctctctcgtgatgccgtttctggttggagacctgattacgaccttgacgatcgtccatggaagctaaacgcaaaaa |
54074698 |
T |
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| Q |
119 |
atcacgttgtcgttcataccaatgcaaacaaaaacaacaacatcgtcaacgagttttcacaccaatcacgtcgtgtttcatccatcaacttcagaaactc |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
54074699 |
atcacgttgtcgttcataccaatgcaaacaaaaacaacaacatcgtcaacgagttttcacaccaatcacgtcgtgtttcatccatcaacttcagaaactc |
54074798 |
T |
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| Q |
219 |
gttctcaacggtttcagttttattaccagattgggagattctcgttctcgtttctccaaacacgccttt |
287 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
54074799 |
gttctcaacggtttcagttttattaccagattgggagattctcgttctcgtttctccaaacacgccttt |
54074867 |
T |
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