View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11745_high_141 (Length: 272)

Name: NF11745_high_141
Description: NF11745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11745_high_141
NF11745_high_141
[»] chr6 (24 HSPs)
chr6 (22-272)||(33650827-33651071)
chr6 (218-272)||(15368843-15368897)
chr6 (218-272)||(15318208-15318262)
chr6 (219-272)||(32459537-32459590)
chr6 (219-272)||(33421758-33421811)
chr6 (220-272)||(20822888-20822940)
chr6 (218-272)||(25127853-25127907)
chr6 (219-272)||(13658830-13658883)
chr6 (220-272)||(32046697-32046749)
chr6 (221-272)||(6531203-6531254)
chr6 (217-272)||(17551399-17551454)
chr6 (225-268)||(28982663-28982706)
chr6 (221-272)||(33712320-33712371)
chr6 (221-272)||(35213581-35213632)
chr6 (218-272)||(5327612-5327666)
chr6 (218-272)||(8505794-8505848)
chr6 (218-272)||(23632657-23632711)
chr6 (222-272)||(24900776-24900826)
chr6 (219-268)||(354274-354323)
chr6 (219-260)||(2777348-2777389)
chr6 (219-272)||(16337943-16337996)
chr6 (219-272)||(22079584-22079636)
chr6 (220-272)||(18141321-18141373)
chr6 (224-272)||(34570615-34570663)
[»] chr4 (39 HSPs)
chr4 (218-272)||(37514152-37514206)
chr4 (222-270)||(2401611-2401659)
chr4 (217-272)||(47288078-47288133)
chr4 (222-272)||(2268528-2268577)
chr4 (218-272)||(42815401-42815455)
chr4 (219-272)||(4915693-4915746)
chr4 (219-272)||(22819647-22819700)
chr4 (219-272)||(51255744-51255797)
chr4 (219-272)||(51734653-51734706)
chr4 (220-272)||(9362698-9362750)
chr4 (220-272)||(31076053-31076105)
chr4 (212-260)||(47519752-47519800)
chr4 (221-272)||(3078928-3078979)
chr4 (221-272)||(5932784-5932835)
chr4 (221-272)||(14593828-14593879)
chr4 (221-272)||(21617183-21617234)
chr4 (221-272)||(32012896-32012947)
chr4 (221-272)||(33860647-33860698)
chr4 (221-272)||(51887663-51887714)
chr4 (217-267)||(2999108-2999158)
chr4 (218-272)||(13086019-13086073)
chr4 (214-272)||(17475315-17475373)
chr4 (220-270)||(36111418-36111468)
chr4 (214-272)||(48722062-48722119)
chr4 (214-272)||(49768890-49768947)
chr4 (218-272)||(55609186-55609239)
chr4 (211-272)||(21392560-21392621)
chr4 (219-272)||(23369353-23369405)
chr4 (215-272)||(43174978-43175034)
chr4 (217-258)||(43769719-43769760)
chr4 (221-270)||(56271360-56271409)
chr4 (220-272)||(2004209-2004261)
chr4 (219-259)||(14010151-14010191)
chr4 (220-272)||(30079845-30079897)
chr4 (218-270)||(34995317-34995369)
chr4 (220-272)||(39345000-39345052)
chr4 (224-272)||(42916653-42916701)
chr4 (216-272)||(43358608-43358663)
chr4 (220-272)||(50721765-50721817)
[»] chr8 (38 HSPs)
chr8 (220-272)||(3946239-3946291)
chr8 (219-272)||(33100489-33100542)
chr8 (212-272)||(67181-67241)
chr8 (217-272)||(1068602-1068657)
chr8 (219-270)||(4658285-4658336)
chr8 (221-272)||(10644822-10644873)
chr8 (217-272)||(13970915-13970970)
chr8 (221-272)||(29991412-29991463)
chr8 (221-272)||(34718115-34718166)
chr8 (216-268)||(5771900-5771952)
chr8 (224-272)||(9549219-9549267)
chr8 (217-269)||(10839505-10839557)
chr8 (220-272)||(42619997-42620049)
chr8 (221-272)||(12707149-12707200)
chr8 (215-270)||(12783760-12783815)
chr8 (221-272)||(16872176-16872227)
chr8 (221-272)||(18651370-18651421)
chr8 (221-272)||(23754727-23754778)
chr8 (221-272)||(25830266-25830317)
chr8 (221-272)||(26026896-26026947)
chr8 (217-272)||(29440542-29440597)
chr8 (211-270)||(36531585-36531644)
chr8 (215-258)||(41541863-41541906)
chr8 (217-272)||(43285983-43286038)
chr8 (218-272)||(2730981-2731035)
chr8 (210-272)||(7598697-7598759)
chr8 (218-272)||(33107887-33107941)
chr8 (218-272)||(35067157-35067211)
chr8 (218-272)||(41600306-41600360)
chr8 (219-272)||(6849147-6849200)
chr8 (221-270)||(25987809-25987858)
chr8 (219-272)||(34435757-34435810)
chr8 (211-272)||(35792059-35792120)
chr8 (216-268)||(5771996-5772048)
chr8 (220-272)||(16966784-16966836)
chr8 (220-268)||(31596947-31596995)
chr8 (220-268)||(40649449-40649497)
chr8 (214-270)||(41955922-41955978)
[»] chr5 (24 HSPs)
chr5 (220-272)||(8920077-8920129)
chr5 (219-272)||(14011315-14011368)
chr5 (220-272)||(4088442-4088494)
chr5 (220-272)||(18695317-18695369)
chr5 (216-272)||(21922165-21922221)
chr5 (220-272)||(30640789-30640841)
chr5 (221-272)||(6517712-6517763)
chr5 (221-268)||(16594400-16594447)
chr5 (217-272)||(17402942-17402997)
chr5 (221-272)||(43441738-43441789)
chr5 (222-272)||(10649436-10649486)
chr5 (218-272)||(19481202-19481256)
chr5 (218-272)||(43214079-43214133)
chr5 (219-272)||(13089802-13089855)
chr5 (220-272)||(189723-189775)
chr5 (220-272)||(1293106-1293158)
chr5 (221-272)||(22098255-22098306)
chr5 (218-272)||(24468306-24468360)
chr5 (222-272)||(41173253-41173303)
chr5 (223-272)||(14321975-14322024)
chr5 (219-272)||(19840006-19840059)
chr5 (211-272)||(22647582-22647642)
chr5 (217-266)||(27487883-27487932)
chr5 (224-272)||(9581582-9581630)
[»] chr1 (43 HSPs)
chr1 (217-272)||(52362478-52362533)
chr1 (218-272)||(15705082-15705136)
chr1 (219-272)||(10890066-10890119)
chr1 (219-272)||(21433421-21433474)
chr1 (217-272)||(9987947-9988002)
chr1 (221-272)||(13489662-13489713)
chr1 (217-272)||(27742613-27742668)
chr1 (221-272)||(44789163-44789214)
chr1 (217-272)||(48858819-48858874)
chr1 (221-272)||(52714921-52714972)
chr1 (218-272)||(32915092-32915146)
chr1 (218-272)||(48983688-48983742)
chr1 (217-270)||(30658870-30658923)
chr1 (220-272)||(9566981-9567033)
chr1 (219-267)||(18982517-18982565)
chr1 (220-272)||(34008179-34008231)
chr1 (220-272)||(43893256-43893308)
chr1 (218-270)||(46911290-46911342)
chr1 (220-272)||(47214207-47214259)
chr1 (221-272)||(649768-649819)
chr1 (217-272)||(4213068-4213123)
chr1 (221-272)||(19947761-19947812)
chr1 (221-272)||(35136844-35136895)
chr1 (221-272)||(36577432-36577483)
chr1 (221-272)||(47820521-47820572)
chr1 (221-272)||(49569996-49570047)
chr1 (218-272)||(8350217-8350270)
chr1 (218-268)||(46859415-46859465)
chr1 (219-272)||(11947793-11947846)
chr1 (219-272)||(24806242-24806295)
chr1 (219-260)||(26837450-26837491)
chr1 (219-272)||(37588695-37588748)
chr1 (219-272)||(46082141-46082194)
chr1 (219-272)||(50328161-50328214)
chr1 (219-272)||(51286387-51286440)
chr1 (213-272)||(3603102-3603162)
chr1 (218-258)||(8200084-8200124)
chr1 (220-272)||(8411738-8411790)
chr1 (220-272)||(20565138-20565190)
chr1 (220-272)||(26585899-26585951)
chr1 (220-272)||(30467546-30467598)
chr1 (214-270)||(35529402-35529458)
chr1 (227-267)||(36775112-36775152)
[»] chr7 (24 HSPs)
chr7 (220-270)||(37899322-37899372)
chr7 (218-272)||(41893912-41893966)
chr7 (220-272)||(37899233-37899285)
chr7 (217-272)||(39231748-39231803)
chr7 (217-272)||(46829475-46829530)
chr7 (218-272)||(35586793-35586847)
chr7 (218-272)||(44184579-44184633)
chr7 (219-272)||(12007206-12007259)
chr7 (219-272)||(13729724-13729777)
chr7 (219-272)||(47448824-47448877)
chr7 (220-272)||(2008878-2008930)
chr7 (217-272)||(16980293-16980348)
chr7 (221-272)||(36352607-36352658)
chr7 (221-272)||(39331985-39332036)
chr7 (221-272)||(43159595-43159646)
chr7 (218-272)||(33845039-33845093)
chr7 (219-272)||(35822995-35823048)
chr7 (219-272)||(44895593-44895645)
chr7 (216-272)||(156002-156058)
chr7 (228-272)||(1471311-1471355)
chr7 (220-272)||(9792765-9792817)
chr7 (220-272)||(13152592-13152643)
chr7 (220-272)||(33180730-33180782)
chr7 (220-272)||(42584801-42584853)
[»] chr3 (44 HSPs)
chr3 (218-272)||(21196121-21196175)
chr3 (217-266)||(33976420-33976469)
chr3 (221-272)||(14207278-14207329)
chr3 (221-272)||(14215026-14215077)
chr3 (221-272)||(29573376-29573427)
chr3 (209-272)||(37894263-37894326)
chr3 (221-272)||(37927225-37927276)
chr3 (217-272)||(46019458-46019513)
chr3 (221-272)||(48352996-48353047)
chr3 (217-272)||(51973388-51973442)
chr3 (221-272)||(55399999-55400050)
chr3 (218-272)||(26996313-26996367)
chr3 (214-272)||(49983371-49983429)
chr3 (219-272)||(31376785-31376838)
chr3 (219-272)||(31931039-31931092)
chr3 (219-272)||(49417573-49417626)
chr3 (219-272)||(54099377-54099430)
chr3 (220-272)||(10811134-10811186)
chr3 (216-272)||(11633608-11633664)
chr3 (220-272)||(50206990-50207042)
chr3 (221-272)||(24482983-24483034)
chr3 (217-268)||(31350630-31350681)
chr3 (221-272)||(34057973-34058024)
chr3 (221-272)||(45054974-45055025)
chr3 (221-272)||(49021711-49021762)
chr3 (221-268)||(49875796-49875843)
chr3 (218-272)||(10206993-10207047)
chr3 (218-272)||(16479629-16479682)
chr3 (218-272)||(27168702-27168756)
chr3 (225-267)||(37143125-37143167)
chr3 (218-272)||(54773774-54773828)
chr3 (219-272)||(21195911-21195964)
chr3 (225-266)||(31425538-31425579)
chr3 (219-272)||(48405408-48405461)
chr3 (217-258)||(49761315-49761356)
chr3 (220-272)||(8821629-8821681)
chr3 (220-272)||(9862532-9862584)
chr3 (220-272)||(19150339-19150391)
chr3 (220-272)||(24095426-24095478)
chr3 (216-272)||(44963839-44963895)
chr3 (216-272)||(45293049-45293105)
chr3 (220-272)||(46623906-46623957)
chr3 (224-272)||(49167753-49167801)
chr3 (220-272)||(52939652-52939703)
[»] chr2 (40 HSPs)
chr2 (218-272)||(30977886-30977940)
chr2 (220-272)||(39449137-39449189)
chr2 (220-272)||(43057063-43057115)
chr2 (217-272)||(670487-670542)
chr2 (217-272)||(2841830-2841885)
chr2 (221-272)||(6999088-6999139)
chr2 (221-272)||(13765400-13765451)
chr2 (218-272)||(2464269-2464322)
chr2 (218-272)||(6336249-6336303)
chr2 (220-270)||(12498658-12498708)
chr2 (219-272)||(5031921-5031974)
chr2 (223-272)||(14233739-14233788)
chr2 (219-272)||(18737894-18737947)
chr2 (224-272)||(2563707-2563755)
chr2 (218-270)||(7648389-7648440)
chr2 (224-272)||(9194432-9194480)
chr2 (218-270)||(17395098-17395150)
chr2 (220-272)||(36802895-36802947)
chr2 (221-272)||(6170630-6170681)
chr2 (221-272)||(15269861-15269912)
chr2 (221-272)||(18723594-18723645)
chr2 (221-272)||(28245728-28245779)
chr2 (216-267)||(29711974-29712024)
chr2 (221-272)||(31922313-31922364)
chr2 (217-272)||(37731220-37731275)
chr2 (221-272)||(38560678-38560729)
chr2 (217-272)||(44254595-44254650)
chr2 (218-272)||(5200245-5200299)
chr2 (218-272)||(27490751-27490804)
chr2 (218-272)||(28679313-28679367)
chr2 (214-272)||(34134791-34134849)
chr2 (218-272)||(39449264-39449318)
chr2 (220-270)||(41042253-41042302)
chr2 (217-258)||(6646831-6646872)
chr2 (219-272)||(22526014-22526067)
chr2 (219-272)||(38821364-38821417)
chr2 (218-270)||(9634458-9634510)
chr2 (220-272)||(18254230-18254281)
chr2 (220-260)||(35589419-35589459)
chr2 (220-272)||(43666699-43666751)
[»] scaffold0532 (1 HSPs)
scaffold0532 (221-272)||(10964-11015)
[»] scaffold0128 (1 HSPs)
scaffold0128 (217-272)||(10932-10987)
[»] scaffold0005 (1 HSPs)
scaffold0005 (221-272)||(223499-223550)
[»] scaffold0432 (1 HSPs)
scaffold0432 (220-270)||(6542-6592)
[»] scaffold0110 (1 HSPs)
scaffold0110 (218-272)||(28347-28401)
[»] scaffold0034 (1 HSPs)
scaffold0034 (214-272)||(101926-101984)
[»] scaffold1956 (1 HSPs)
scaffold1956 (220-272)||(770-822)
[»] scaffold0321 (1 HSPs)
scaffold0321 (220-272)||(19635-19687)
[»] scaffold0136 (1 HSPs)
scaffold0136 (220-272)||(38424-38476)


Alignment Details
Target: chr6 (Bit Score: 191; Significance: 1e-104; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 22 - 272
Target Start/End: Original strand, 33650827 - 33651071
Alignment:
Q  22 aacgagtttttagtgtgactaatactttgtccaaacattagttttgtagtcggtccaacctttattgaatatatatcgattctcgagttccacgtgattc 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  33650827 aacgagtttttagtgtgactaatactttgtccaaacattagttttgtagtcggtccaacctttattgaatat--atcgattctcgagttccacgtgattc 33650924  T
Q  122 aaaggtcctattaccttgttaaaaaatgcgctagtagtttttccttcagaatacacacacaagtagagattaattattactctctagtcttatttaaaag 221  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||| ||||||||||||||    
T  33650925 aaaggtcctattaccttcttacaaaatgcgctagtagtttttccttcagaat----acacaagtagagattaattattactctctcgtcttatttaaaag 33651020  T
Q  222 agaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||| ||||||| | ||||||| || |||||||||||||||||    
T  33651021 agaaatgatatttgaacatctattttgtaataatttttgtgacaactttct 33651071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 15368897 - 15368843
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||    
T  15368897 aaagagaaatgatatttgaacatccattttgtaacaacttttgttacaactttct 15368843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 15318262 - 15318208
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||| ||||||||| ||||| ||||||||||| ||||||||||    
T  15318262 aaagagaaatgatatttgaacatccattttgtgacaacttttgttacaactttct 15318208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 32459590 - 32459537
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||| ||||||||| ||| | ||||||||||||||||||||||    
T  32459590 aagagaaatgatatttgaacatccattttatgacaacttttgtgacaactttct 32459537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 33421758 - 33421811
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||| ||||||||| ||||| ||||||||||| ||||||||||    
T  33421758 aagagaaatgatatttgaacatccattttgtgacaacttttgttacaactttct 33421811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 20822940 - 20822888
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| ||||||||| ||| | ||||||||||||||||||||||    
T  20822940 agagaaatgatatttgaacatccattttatgacaacttttgtgacaactttct 20822888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 25127907 - 25127853
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||| | ||| ||| ||||||||||||||||||| ||||||||    
T  25127907 aaagagaaatgatatttgtacaaccattttgtaacaacttttgtgaaaactttct 25127853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 13658830 - 13658883
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||  |||||||| || ||||||||| |||||||||||||||    
T  13658830 aagagaaatgatatttcaacatccatttggtaacaactattgtgacaactttct 13658883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 32046697 - 32046749
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| ||||||| | ||||||||||||| ||||||||| ||||    
T  32046697 agagaaatgatatttgaacatcaattttgtaacaacttatgtgacaaccttct 32046749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Complemental strand, 6531254 - 6531203
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| ||||||||| ||||| ||||||| || |||||||||||    
T  6531254 gagaaatgatatttgaacatccattttgtgacaacttatgggacaactttct 6531203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 17551454 - 17551399
Alignment:
Q  217 aaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||||| ||||| ||| ||| | ||||||||||| ||||||||||    
T  17551454 aaaagagaaatgatatttgaacaaccattttttgacaacttttgtaacaactttct 17551399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 28982706 - 28982663
Alignment:
Q  225 aatgatattggaacatccagtttgtaacaacttttgtgacaact 268  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||||    
T  28982706 aatgatatttgaacatccattttttaacaacttttgtgacaact 28982663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 33712320 - 33712371
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| ||||| ||| ||| | ||||||||||||||||||||||    
T  33712320 gagaaatgatatttgaacaaccactttttgacaacttttgtgacaactttct 33712371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Complemental strand, 35213632 - 35213581
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| ||||||| | ||||| ||||||||||| ||||||||||    
T  35213632 gagaaatgatatttgaacatctattttgtgacaacttttgtaacaactttct 35213581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 5327666 - 5327612
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||| ||||||||| || || ||||||||| | ||||||||||    
T  5327666 aaagagaaatgatatttgaacatccatttagtgacaacttttataacaactttct 5327612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 8505848 - 8505794
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||| |||||  || ||| | ||||||||||||||||||||||    
T  8505848 aaagagaaatgatatttgaacaatcattttttgacaacttttgtgacaactttct 8505794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 23632711 - 23632657
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||| ||||| ||| |||  |||||||||||||||| ||||||    
T  23632711 aaagagaaatgatatttgaacaaccacttttaaacaacttttgtgacacctttct 23632657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 222 - 272
Target Start/End: Original strand, 24900776 - 24900826
Alignment:
Q  222 agaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||| ||||| ||| ||| | ||||||||||||||||||||||    
T  24900776 agaaatgatatttgaacaaccattttttgacaacttttgtgacaactttct 24900826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 268
Target Start/End: Original strand, 354274 - 354323
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttgtgacaact 268  Q
    ||||| |||||| || ||||||||| ||| ||||||||||||||||||||    
T  354274 aagagtaatgatgtttgaacatccattttttaacaacttttgtgacaact 354323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 260
Target Start/End: Complemental strand, 2777389 - 2777348
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttg 260  Q
    ||||||||||||||| ||||||||| || |||||||||||||    
T  2777389 aagagaaatgatatttgaacatccatttagtaacaacttttg 2777348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 16337996 - 16337943
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||||| ||| ||| ||| ||| ||||||||| ||||||||||    
T  16337996 aagagaaatgatattggtacaaccattttataataacttttgtaacaactttct 16337943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 22079636 - 22079584
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||| ||||| ||| ||| || |||||||||||||||||||||    
T  22079636 aagagaaatgatatttgaacaaccatttttta-caacttttgtgacaactttct 22079584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 18141373 - 18141321
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||  ||||| || ||| | ||||||||||||||||||||||    
T  18141373 agagaaatgatatttaaacattcattttatgacaacttttgtgacaactttct 18141321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 272
Target Start/End: Complemental strand, 34570663 - 34570615
Alignment:
Q  224 aaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||| | ||| ||| ||||||| ||||||||||||||||||||    
T  34570663 aaatgatatttgtacaaccattttgtaataacttttgtgacaactttct 34570615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 37514206 - 37514152
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||| | ||||||| ||||||||||||||||||||||||||||    
T  37514206 aaagagaaatgatatttgtacatccattttgtaacaacttttgtgacaactttct 37514152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 222 - 270
Target Start/End: Original strand, 2401611 - 2401659
Alignment:
Q  222 agaaatgatattggaacatccagtttgtaacaacttttgtgacaacttt 270  Q
    |||||||||||| ||||||||| ||||| ||||||||||||||||||||    
T  2401611 agaaatgatatttgaacatccattttgtgacaacttttgtgacaacttt 2401659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 272
Target Start/End: Original strand, 47288078 - 47288133
Alignment:
Q  217 aaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||||| | ||| ||| |||||||||| |||||||||||||||||    
T  47288078 aaaagagaaatgatatttgtacaaccattttgtaacaatttttgtgacaactttct 47288133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 272
Target Start/End: Complemental strand, 2268577 - 2268528
Alignment:
Q  222 agaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||| ||||||||| ||| ||||||||||||||||||||||||    
T  2268577 agaaatgatatttgaacatccatttt-taacaacttttgtgacaactttct 2268528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 42815401 - 42815455
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||| | ||| | | ||||||||||||||||||||||||||||    
T  42815401 aaagagaaatgatatttgtacaactattttgtaacaacttttgtgacaactttct 42815455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 4915746 - 4915693
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||| ||||||||| ||||| |||| |||| ||||||||||||    
T  4915746 aagagaaatgatatttgaacatccattttgtgacaatttttatgacaactttct 4915693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 22819647 - 22819700
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||| ||||||||| ||||| ||||||||||  ||||||||||    
T  22819647 aagagaaatgatatttgaacatccattttgtgacaacttttgcaacaactttct 22819700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 51255744 - 51255797
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||| ||||| ||| ||| | ||||||||||||||||||||||    
T  51255744 aagagaaatgatatttgaacaaccattttttgacaacttttgtgacaactttct 51255797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 51734706 - 51734653
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||| ||||| ||| |||  |||||||||||||||||||||||    
T  51734706 aagagaaatgatatttgaacaaccacttttaaacaacttttgtgacaactttct 51734653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 9362750 - 9362698
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| ||||||||| ||  | ||||||||||||||||||||||    
T  9362750 agagaaatgatatttgaacatccatttaatgacaacttttgtgacaactttct 9362698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 31076053 - 31076105
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| ||||||||| || |||||||||| || |||||||||||    
T  31076053 agagaaatgatatttgaacatccatttggtaacaacttctgggacaactttct 31076105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 47519800 - 47519752
Alignment:
Q  212 tatttaaaagagaaatgatattggaacatccagtttgtaacaacttttg 260  Q
    ||||||||||| |||||||||| | ||||||| ||||||||||||||||    
T  47519800 tatttaaaagataaatgatatttgtacatccattttgtaacaacttttg 47519752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Complemental strand, 3078979 - 3078928
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| | |||  || ||||||||||||||||||||||||||||    
T  3078979 gagaaatgatatttgtacaatcattttgtaacaacttttgtgacaactttct 3078928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Complemental strand, 5932835 - 5932784
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| ||||| ||| ||| | ||||||||||||||||||||||    
T  5932835 gagaaatgatatttgaacaaccactttttgacaacttttgtgacaactttct 5932784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 14593828 - 14593879
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| ||| ||||| ||||| ||||||||||| ||||||||||    
T  14593828 gagaaatgatatttgaatatccattttgtgacaacttttgttacaactttct 14593879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 21617183 - 21617234
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| ||||||||| ||||| |||| |||||| ||||||||||    
T  21617183 gagaaatgatatttgaacatccattttgtgacaatttttgttacaactttct 21617234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 32012896 - 32012947
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| ||||| ||| ||| | ||||||||||||||||||||||    
T  32012896 gagaaatgatatttgaacaaccaatttttgacaacttttgtgacaactttct 32012947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 33860647 - 33860698
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| ||||||||| || || |||| |||||||||||||||||    
T  33860647 gagaaatgatatttgaacatccatttggtgacaatttttgtgacaactttct 33860698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 51887663 - 51887714
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| ||||||||| ||||| ||||||||||  ||||||||||    
T  51887663 gagaaatgatatttgaacatccattttgtgacaacttttgctacaactttct 51887714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 267
Target Start/End: Original strand, 2999108 - 2999158
Alignment:
Q  217 aaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaac 267  Q
    ||||||||||||||||| ||||||||| ||| | |||| ||||||||||||    
T  2999108 aaaagagaaatgatatttgaacatccattttatgacaatttttgtgacaac 2999158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 13086019 - 13086073
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||| || ||| || ||||| ||||||||||| ||||||||||    
T  13086019 aaagagaaatgatatttgatcattcattttgtgacaacttttgtaacaactttct 13086073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 17475315 - 17475373
Alignment:
Q  214 tttaaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||||||| |||||| || || || | ||||||| ||||||||||||    
T  17475315 tttaaaagagaaatgatatttgaacattcatttggtgataacttttttgacaactttct 17475373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 36111468 - 36111418
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaacttt 270  Q
    |||||||||||||| ||||||||| || |||||||||||||  ||||||||    
T  36111468 agagaaatgatatttgaacatccatttagtaacaacttttgcaacaacttt 36111418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 48722062 - 48722119
Alignment:
Q  214 tttaaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||||||| | ||||||| |||| |||||||||| |||||| |||||    
T  48722062 tttaaaagagaaatgatatttgtacatccattttgcaacaactttt-tgacaattttct 48722119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 49768947 - 49768890
Alignment:
Q  214 tttaaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||||||| | ||||||| |||| ||||| |||| ||||||||||||    
T  49768947 tttaaaagagaaatgatatttgtacatccattttgcaacaa-ttttttgacaactttct 49768890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 55609239 - 55609186
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||| | ||| ||| |||||| |||||||||||||||||||||    
T  55609239 aaagagaaatgatatttgtacaaccattttgta-caacttttgtgacaactttct 55609186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 211 - 272
Target Start/End: Original strand, 21392560 - 21392621
Alignment:
Q  211 ttatttaaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||| ||||||||||||||||| |||||  || ||||||| || |||||||||| ||||||    
T  21392560 ttattcaaaagagaaatgatatttgaacaatcattttgtaataatttttgtgacagctttct 21392621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 23369405 - 23369353
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||| ||||| ||| ||| || |||||||||||||||||||||    
T  23369405 aagagaaatgatatttgaacaaccatttttta-caacttttgtgacaactttct 23369353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 215 - 272
Target Start/End: Original strand, 43174978 - 43175034
Alignment:
Q  215 ttaaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||||||| ||||| ||| ||| | ||||||||||||| ||||||||    
T  43174978 ttaaaagagaaatgatatttgaacaacca-ttttttacaacttttgtgataactttct 43175034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 43769719 - 43769760
Alignment:
Q  217 aaaagagaaatgatattggaacatccagtttgtaacaacttt 258  Q
    ||||||||||||||||| ||||||||| ||||| ||||||||    
T  43769719 aaaagagaaatgatatttgaacatccattttgtgacaacttt 43769760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 56271360 - 56271409
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaacttt 270  Q
    ||||||||||||| ||||||||| ||| | | ||||||||||||||||||    
T  56271360 gagaaatgatatttgaacatccattttatgataacttttgtgacaacttt 56271409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 2004261 - 2004209
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| ||||| ||| ||| ||||||||||||  ||||||||||    
T  2004261 agagaaatgatatttgaacaaccattttttaacaacttttgcaacaactttct 2004209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 259
Target Start/End: Complemental strand, 14010191 - 14010151
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaactttt 259  Q
    ||||||||||||||| ||||||||| ||||| |||||||||    
T  14010191 aagagaaatgatatttgaacatccattttgtgacaactttt 14010151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 30079845 - 30079897
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| ||||||||| || || ||||||||||  ||||||||||    
T  30079845 agagaaatgatatttgaacatccatttagtgacaacttttgcaacaactttct 30079897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 270
Target Start/End: Original strand, 34995317 - 34995369
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaacttt 270  Q
    |||||||||| ||||| | ||| ||| ||||||||||||||||||||| ||||    
T  34995317 aaagagaaattatatttgtacaaccattttgtaacaacttttgtgacatcttt 34995369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 39345052 - 39345000
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| ||||||||| ||||| |||| |||||  ||||||||||    
T  39345052 agagaaatgatatttgaacatccattttgtgacaatttttgcaacaactttct 39345000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 272
Target Start/End: Original strand, 42916653 - 42916701
Alignment:
Q  224 aaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||| ||||| ||| ||| |||||||||||||| |||||||||    
T  42916653 aaatgatatttgaacaaccattttataacaacttttgtgtcaactttct 42916701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 272
Target Start/End: Original strand, 43358608 - 43358663
Alignment:
Q  216 taaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||||| | ||| ||| ||| |||||||||||| |||||||||||    
T  43358608 taaaagagaaatgatatttgtacaaccaatttctaacaacttttg-gacaactttct 43358663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 50721817 - 50721765
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| ||||| ||| ||| | ||||||||||||| ||||||||    
T  50721817 agagaaatgatatttgaacaaccaatttttgacaacttttgtgataactttct 50721765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 3946239 - 3946291
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| ||||||||| ||||| ||||||||||||||||||||||    
T  3946239 agagaaatgatatttgaacatccattttgtgacaacttttgtgacaactttct 3946291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 33100542 - 33100489
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||| ||||| ||| ||| ||||||||||||||||||||||||    
T  33100542 aagagaaatgatatttgaacaaccattttataacaacttttgtgacaactttct 33100489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 212 - 272
Target Start/End: Complemental strand, 67241 - 67181
Alignment:
Q  212 tatttaaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||| ||||||||||||||||| | ||| ||| ||| ||||||||||||||||||||||||    
T  67241 tattgaaaagagaaatgatatttgtacaaccattttctaacaacttttgtgacaactttct 67181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 272
Target Start/End: Original strand, 1068602 - 1068657
Alignment:
Q  217 aaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||||| ||||| ||| ||| | ||||||||||||||||||||||    
T  1068602 aaaagagaaatgatatttgaacaaccactttttgacaacttttgtgacaactttct 1068657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 4658336 - 4658285
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttgtgacaacttt 270  Q
    ||||||||||||||| ||||||||| ||| | ||||||||||||||||||||    
T  4658336 aagagaaatgatatttgaacatccattttatgacaacttttgtgacaacttt 4658285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 221 - 272
Target Start/End: Complemental strand, 10644873 - 10644822
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| | ||| ||| ||||||||||||||||||||||||||||    
T  10644873 gagaaatgatatttgtacaaccattttgtaacaacttttgtgacaactttct 10644822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 272
Target Start/End: Original strand, 13970915 - 13970970
Alignment:
Q  217 aaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||||| | ||||||| ||  ||||||||||||||||||||||||    
T  13970915 aaaagagaaatgatatttgtacatccatttcctaacaacttttgtgacaactttct 13970970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 29991412 - 29991463
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| ||||||||| ||||| ||||||||||| ||||||||||    
T  29991412 gagaaatgatatttgaacatccattttgtgacaacttttgttacaactttct 29991463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 34718115 - 34718166
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| ||||||||| ||||| ||||||||||| ||||||||||    
T  34718115 gagaaatgatatttgaacatccattttgtgacaacttttgttacaactttct 34718166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 5771952 - 5771900
Alignment:
Q  216 taaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaact 268  Q
    |||||||||||||||||| ||||| ||| ||||| ||||||||||| ||||||    
T  5771952 taaaagagaaatgatatttgaacaaccattttgtgacaacttttgtaacaact 5771900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 272
Target Start/End: Complemental strand, 9549267 - 9549219
Alignment:
Q  224 aaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||| ||||||||| ||||| |||||||||||||||| |||||    
T  9549267 aaatgatatttgaacatccattttgtgacaacttttgtgacaattttct 9549219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 10839557 - 10839505
Alignment:
Q  217 aaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactt 269  Q
    |||| |||||||||||| ||||| ||| ||| |||||||||||||||||||||    
T  10839557 aaaaaagaaatgatatttgaacaaccaatttttaacaacttttgtgacaactt 10839505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 42620049 - 42619997
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| | ||||||| ||| |||||||||||||||||| |||||    
T  42620049 agagaaatgatatttgtacatccattttctaacaacttttgtgacaaatttct 42619997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 12707149 - 12707200
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| ||||||||| ||| | |||||||||| |||||||||||    
T  12707149 gagaaatgatatttgaacatccattttatgacaacttttgcgacaactttct 12707200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 215 - 270
Target Start/End: Original strand, 12783760 - 12783815
Alignment:
Q  215 ttaaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaacttt 270  Q
    ||||||||||||||||||| ||||||||| ||  | |||| |||||||||||||||    
T  12783760 ttaaaagagaaatgatatttgaacatccatttaatgacaatttttgtgacaacttt 12783815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Complemental strand, 16872227 - 16872176
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| ||||||||| ||||| ||||||||||  ||||||||||    
T  16872227 gagaaatgatatttgaacatccattttgtgacaacttttgcaacaactttct 16872176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 18651370 - 18651421
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| ||||||| | || ||||||||||||||||||| |||||    
T  18651370 gagaaatgatatttgaacatctatttggtaacaacttttgtgacaattttct 18651421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Complemental strand, 23754778 - 23754727
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| ||||| ||| ||| ||| ||||||||||||||||||||    
T  23754778 gagaaatgatatttgaacaaccattttttaataacttttgtgacaactttct 23754727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Complemental strand, 25830317 - 25830266
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| | ||| ||| ||| ||||||||||||||||||||||||    
T  25830317 gagaaatgatatttgtacaaccattttctaacaacttttgtgacaactttct 25830266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 26026896 - 26026947
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| ||||| ||| ||| | ||||||||||||||||||||||    
T  26026896 gagaaatgatatttgaacaaccattttttgacaacttttgtgacaactttct 26026947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 29440597 - 29440542
Alignment:
Q  217 aaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||||| |||||| || || || | ||||||||||||||||||||    
T  29440597 aaaagagaaatgatatttgaacattcatttggtgataacttttgtgacaactttct 29440542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 211 - 270
Target Start/End: Original strand, 36531585 - 36531644
Alignment:
Q  211 ttatttaaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaacttt 270  Q
    |||||| | |||||||||||||| ||||||||| || || |||||| |||||||||||||    
T  36531585 ttattttatagagaaatgatatttgaacatccatttggtgacaactattgtgacaacttt 36531644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 215 - 258
Target Start/End: Original strand, 41541863 - 41541906
Alignment:
Q  215 ttaaaagagaaatgatattggaacatccagtttgtaacaacttt 258  Q
    ||||||||||||||||||| ||||||||| ||||| ||||||||    
T  41541863 ttaaaagagaaatgatatttgaacatccattttgtgacaacttt 41541906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 43286038 - 43285983
Alignment:
Q  217 aaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||||| | ||| ||| ||| ||| ||||||||||||||||||||    
T  43286038 aaaagagaaatgatatttggacaaccattttctaataacttttgtgacaactttct 43285983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 2731035 - 2730981
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||| ||||| ||| ||| | ||||||||||| ||||||||||    
T  2731035 aaagagaaatgatatttgaacaaccactttttgacaacttttgtaacaactttct 2730981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 272
Target Start/End: Original strand, 7598697 - 7598759
Alignment:
Q  210 cttatttaaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||| ||||| ||||||||||||| ||||| ||| ||| | |||||||||||||| |||||||    
T  7598697 cttaattaaaggagaaatgatatttgaacaaccattttttgacaacttttgtgaccactttct 7598759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 33107941 - 33107887
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||| ||||| ||| ||| | ||||||||| ||||||||||||    
T  33107941 aaagagaaatgatatttgaacaaccactttttgacaacttttatgacaactttct 33107887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 35067157 - 35067211
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||| | ||| ||| ||  ||||||||||||||||||||||||    
T  35067157 aaagagaaatgatatttgtacaaccatttcttaacaacttttgtgacaactttct 35067211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 41600306 - 41600360
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||| |||||| || ||  | ||||||||||||||||||||||    
T  41600306 aaagagaaatgatatttgaacattcatttattgacaacttttgtgacaactttct 41600360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 6849147 - 6849200
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||| ||||||||| ||||| ||| ||| ||||||||||| ||||||||||||    
T  6849147 aagagcaatgatatttgaacagccattttctaacaacttttatgacaactttct 6849200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 25987858 - 25987809
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaacttt 270  Q
    ||||||||||||| ||||| ||| ||| | ||||||||||||||||||||    
T  25987858 gagaaatgatatttgaacaaccatttttttacaacttttgtgacaacttt 25987809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 34435810 - 34435757
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||| ||||| ||| ||| | |||||||||||||||| |||||    
T  34435810 aagagaaatgatatttgaacaaccactttttgacaacttttgtgacaattttct 34435757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 211 - 272
Target Start/End: Original strand, 35792059 - 35792120
Alignment:
Q  211 ttatttaaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||| ||||||||||||||| | |||  || ||| ||| ||||||||||||||||||||    
T  35792059 ttatttagaagagaaatgatatttgtacaatcattttttaaaaacttttgtgacaactttct 35792120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 5772048 - 5771996
Alignment:
Q  216 taaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaact 268  Q
    |||||||||||||||||| ||||| ||| ||| | ||||||||||| ||||||    
T  5772048 taaaagagaaatgatatttgaacaaccattttttgacaacttttgtaacaact 5771996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 16966784 - 16966836
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| ||||||||| || || ||||||||||  ||||||||||    
T  16966784 agagaaatgatatttgaacatccatttagtgacaacttttgcaacaactttct 16966836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 268
Target Start/End: Original strand, 31596947 - 31596995
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaact 268  Q
    |||||||||||||| ||||||||| ||| | |||| |||||||||||||    
T  31596947 agagaaatgatatttgaacatccattttatgacaatttttgtgacaact 31596995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 268
Target Start/End: Original strand, 40649449 - 40649497
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaact 268  Q
    |||||||||||||| |||||| || ||| |||||| |||||||||||||    
T  40649449 agagaaatgatatttgaacattcattttttaacaatttttgtgacaact 40649497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 270
Target Start/End: Original strand, 41955922 - 41955978
Alignment:
Q  214 tttaaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaacttt 270  Q
    |||||||||||||||||||| | | | ||| ||| ||||||||||| ||||||||||    
T  41955922 tttaaaagagaaatgatatttgtataaccattttttaacaacttttatgacaacttt 41955978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 8920077 - 8920129
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| ||||||||| ||||| ||||||||||||||||||||||    
T  8920077 agagaaatgatatttgaacatccattttgtgacaacttttgtgacaactttct 8920129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 14011315 - 14011368
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||| |||||  || ||||||||||||||||||||||||||||    
T  14011315 aagagaaatgatatttgaacaatcattttgtaacaacttttgtgacaactttct 14011368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 4088442 - 4088494
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| | ||||||| ||| ||||||||||||||||||||||||    
T  4088442 agagaaatgatatttgtacatccattttataacaacttttgtgacaactttct 4088494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 18695317 - 18695369
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| | ||| ||| ||||||||||||||||||||||||||||    
T  18695317 agagaaatgatatttgtacaaccattttgtaacaacttttgtgacaactttct 18695369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 21922221 - 21922165
Alignment:
Q  216 taaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||| ||||||||||||| ||||||||| ||||| ||||| ||||||||||||||||    
T  21922221 taaatgagaaatgatatttgaacatccattttgtgacaacgtttgtgacaactttct 21922165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 30640789 - 30640841
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| ||||||||| ||||| ||||||||||| ||||||||||    
T  30640789 agagaaatgatatttgaacatccattttgtgacaacttttgttacaactttct 30640841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 6517712 - 6517763
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| ||||||||| ||| | ||||||||||||||||||||||    
T  6517712 gagaaatgatatttgaacatccattttatgacaacttttgtgacaactttct 6517763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 221 - 268
Target Start/End: Complemental strand, 16594447 - 16594400
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaact 268  Q
    ||||||||||||| ||||||||| ||| ||||||||||||||||||||    
T  16594447 gagaaatgatatttgaacatccattttttaacaacttttgtgacaact 16594400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 17402997 - 17402942
Alignment:
Q  217 aaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||||| ||||||||| || || |||| |||||||||||||||||    
T  17402997 aaaagagaaatgatatttgaacatccatttggtgacaatttttgtgacaactttct 17402942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 43441738 - 43441789
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| ||||||||| ||||||||||||||||  ||||||||||    
T  43441738 gagaaatgatatttgaacatccattttgtaacaacttttgcaacaactttct 43441789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 272
Target Start/End: Original strand, 10649436 - 10649486
Alignment:
Q  222 agaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||| ||||||||| ||| | ||||||||||||||||||||||    
T  10649436 agaaatgatatttgaacatccattttatgacaacttttgtgacaactttct 10649486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 19481256 - 19481202
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||| ||||||||| ||| | | ||||||||||||||||||||    
T  19481256 aaagagaaatgatatttgaacatccattttatgataacttttgtgacaactttct 19481202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 43214133 - 43214079
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||| ||||||| | |||| ||||||||||||||||| |||||    
T  43214133 aaagagaaatgatatttgaacatctattttgcaacaacttttgtgacaattttct 43214079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 13089855 - 13089802
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||| ||||| ||| ||| | ||||||||||||||||||||||    
T  13089855 aagagaaatgatatttgaacaaccattttttgacaacttttgtgacaactttct 13089802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 189775 - 189723
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| ||||||||| ||| | | ||||||||||||||||||||    
T  189775 agagaaatgatatttgaacatccattttatgataacttttgtgacaactttct 189723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 1293158 - 1293106
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| | ||| ||| ||| ||||||||||||||||||||||||    
T  1293158 agagaaatgatatttgtacaaccattttttaacaacttttgtgacaactttct 1293106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 22098255 - 22098306
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| | ||| ||| ||| ||||||||||||||||||||||||    
T  22098255 gagaaatgatatttgtacaaccattttctaacaacttttgtgacaactttct 22098306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 24468360 - 24468306
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||| ||||| ||| |||  |||||||||||||| ||||||||    
T  24468360 aaagagaaatgatatttgaacaaccatttttaaacaacttttgtgataactttct 24468306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 222 - 272
Target Start/End: Original strand, 41173253 - 41173303
Alignment:
Q  222 agaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||  |||||||| ||||| ||||||||||| ||||||||||    
T  41173253 agaaatgatatttaaacatccattttgtgacaacttttgtaacaactttct 41173303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 14322024 - 14321975
Alignment:
Q  223 gaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||| | ||| ||| ||| ||||||||||||||||||||||||    
T  14322024 gaaatgatatttgtacaaccattttctaacaacttttgtgacaactttct 14321975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 19840059 - 19840006
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||| |||||| || ||| | |||| |||||||||||||||||    
T  19840059 aagagaaatgatatttgaacattcattttatgacaatttttgtgacaactttct 19840006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 211 - 272
Target Start/End: Complemental strand, 22647642 - 22647582
Alignment:
Q  211 ttatttaaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||| ||||||||||||||| | ||| ||| ||| ||||||||||| ||||||||||||    
T  22647642 ttatttataagagaaatgatatttgcacaaccaatttctaacaactttt-tgacaactttct 22647582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 27487883 - 27487932
Alignment:
Q  217 aaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaa 266  Q
    ||||||||||||||||| |||||  || ||| ||||||||||||||||||    
T  27487883 aaaagagaaatgatatttgaacaatcaatttttaacaacttttgtgacaa 27487932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 272
Target Start/End: Original strand, 9581582 - 9581630
Alignment:
Q  224 aaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||| ||||||||| || || | ||||||||||||||||||||    
T  9581582 aaatgatatttgaacatccatttagtgataacttttgtgacaactttct 9581630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 272
Target Start/End: Original strand, 52362478 - 52362533
Alignment:
Q  217 aaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||||| ||||||||| ||| | ||||||||||||||||||||||    
T  52362478 aaaagagaaatgatatttgaacatccattttatgacaacttttgtgacaactttct 52362533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 15705136 - 15705082
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||| ||||||||| ||| | ||||||||||||||||||||||    
T  15705136 aaagagaaatgatatttgaacatccattttatgacaacttttgtgacaactttct 15705082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 10890119 - 10890066
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||| ||||||||| ||| | ||||||||||||||||||||||    
T  10890119 aagagaaatgatatttgaacatccattttatgacaacttttgtgacaactttct 10890066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 21433474 - 21433421
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||| | ||| ||| ||||||||||||||||||||||||||||    
T  21433474 aagagaaatgatatttgtacaaccattttgtaacaacttttgtgacaactttct 21433421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 272
Target Start/End: Original strand, 9987947 - 9988002
Alignment:
Q  217 aaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||||| ||||| ||| ||| | ||||||||||||||||||||||    
T  9987947 aaaagagaaatgatatttgaacaaccaatttttgacaacttttgtgacaactttct 9988002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 13489662 - 13489713
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| ||||||||| ||| | ||||||||||||||||||||||    
T  13489662 gagaaatgatatttgaacatccattttatgacaacttttgtgacaactttct 13489713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 272
Target Start/End: Original strand, 27742613 - 27742668
Alignment:
Q  217 aaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||||| ||||| ||| ||| | ||||||||||||||||||||||    
T  27742613 aaaagagaaatgatatttgaacaaccactttttgacaacttttgtgacaactttct 27742668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 221 - 272
Target Start/End: Complemental strand, 44789214 - 44789163
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| ||||||||| ||||| ||||||||||| ||||||||||    
T  44789214 gagaaatgatatttgaacatccattttgtgacaacttttgttacaactttct 44789163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 272
Target Start/End: Original strand, 48858819 - 48858874
Alignment:
Q  217 aaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||||| ||||| ||| ||| | ||||||||||||||||||||||    
T  48858819 aaaagagaaatgatatttgaacaaccactttttgacaacttttgtgacaactttct 48858874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 221 - 272
Target Start/End: Complemental strand, 52714972 - 52714921
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| ||||||||| ||| |||||||||||||||||| |||||    
T  52714972 gagaaatgatatttgaacatccattttataacaacttttgtgacaattttct 52714921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 32915146 - 32915092
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||| ||||||| | ||| | ||||||||||||||||||||||    
T  32915146 aaagagaaatgatatttgaacatctattttatgacaacttttgtgacaactttct 32915092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 48983742 - 48983688
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||| ||||| ||| ||| | ||||||||||||||||||||||    
T  48983742 aaagagaaatgatatttgaacaaccattttttgacaacttttgtgacaactttct 48983688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 30658923 - 30658870
Alignment:
Q  217 aaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaacttt 270  Q
    |||| |||||||||||| ||||||||| ||||| ||||||||||| ||||||||    
T  30658923 aaaatagaaatgatatttgaacatccattttgtgacaacttttgttacaacttt 30658870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 9567033 - 9566981
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| ||||| ||| ||| | ||||||||||||||||||||||    
T  9567033 agagaaatgatatttgaacaaccattttttgacaacttttgtgacaactttct 9566981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 267
Target Start/End: Original strand, 18982517 - 18982565
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttgtgacaac 267  Q
    ||||| ||||||||| ||||||||| ||| |||||||||||||||||||    
T  18982517 aagagtaatgatatttgaacatccattttttaacaacttttgtgacaac 18982565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 34008179 - 34008231
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| ||||||| | ||| | ||||||||||||||||||||||    
T  34008179 agagaaatgatatttgaacatctattttatgacaacttttgtgacaactttct 34008231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 43893256 - 43893308
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| ||||||||| ||||| ||||||||| |||||| |||||    
T  43893256 agagaaatgatatttgaacatccattttgtcacaacttttatgacaattttct 43893308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 270
Target Start/End: Original strand, 46911290 - 46911342
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaacttt 270  Q
    ||||||||||||||||  |||||||| ||||| ||||||||||| ||||||||    
T  46911290 aaagagaaatgatatttcaacatccattttgtgacaacttttgttacaacttt 46911342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 47214207 - 47214259
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| ||||||| | ||| | ||||||||||||||||||||||    
T  47214207 agagaaatgatatttgaacatctattttatgacaacttttgtgacaactttct 47214259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 649768 - 649819
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| ||||| ||| ||| | ||||||||||||||||||||||    
T  649768 gagaaatgatatttgaacaaccatttttttacaacttttgtgacaactttct 649819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 272
Target Start/End: Original strand, 4213068 - 4213123
Alignment:
Q  217 aaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||||| ||||| ||| ||| | | ||||||||||||||||||||    
T  4213068 aaaagagaaatgatatttgaacaaccattttttgataacttttgtgacaactttct 4213123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Complemental strand, 19947812 - 19947761
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| ||||| ||| ||| | ||||||||||||||||||||||    
T  19947812 gagaaatgatatttgaacaaccattttttgacaacttttgtgacaactttct 19947761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 35136844 - 35136895
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| ||||||||| ||||| ||||||||||  ||||||||||    
T  35136844 gagaaatgatatttgaacatccattttgtgacaacttttgcaacaactttct 35136895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Complemental strand, 36577483 - 36577432
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| ||||||||| ||||| ||||||||||  ||||||||||    
T  36577483 gagaaatgatatttgaacatccattttgtgacaacttttgcaacaactttct 36577432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Complemental strand, 47820572 - 47820521
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| ||||||||| ||| | ||||||||||| ||||||||||    
T  47820572 gagaaatgatatttgaacatccattttatgacaacttttgttacaactttct 47820521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 49569996 - 49570047
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| | ||||||| ||  ||||||||||||||||||||||||    
T  49569996 gagaaatgatatttgtacatccatttcctaacaacttttgtgacaactttct 49570047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 8350270 - 8350217
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||| ||||| ||| ||| || |||||||||||||||||||||    
T  8350270 aaagagaaatgatatttgaacaaccatttttta-caacttttgtgacaactttct 8350217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 268
Target Start/End: Original strand, 46859415 - 46859465
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaact 268  Q
    |||||| ||||||||| || |||||| ||| ||||||||||||||||||||    
T  46859415 aaagagtaatgatatttgagcatccattttttaacaacttttgtgacaact 46859465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 11947793 - 11947846
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||| | ||| ||| ||| | ||||||||||||||||||||||    
T  11947793 aagagaaatgatatttgtacaaccattttatgacaacttttgtgacaactttct 11947846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 24806295 - 24806242
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||| ||| | ||| ||| | ||||||||||||||||||||||    
T  24806295 aagagaaatgatatttgaataaccactttttgacaacttttgtgacaactttct 24806242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 260
Target Start/End: Original strand, 26837450 - 26837491
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttg 260  Q
    ||||||||||||||| ||||||||| || |||||||||||||    
T  26837450 aagagaaatgatatttgaacatccacttagtaacaacttttg 26837491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 37588748 - 37588695
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||| ||||||  | ||||| ||||||||||| ||||||||||    
T  37588748 aagagaaatgatatttgaacatttattttgtgacaacttttgttacaactttct 37588695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 46082194 - 46082141
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||| ||||||||| || || ||||||||||  ||||||||||    
T  46082194 aagagaaatgatatttgaacatccatttagtgacaacttttgcaacaactttct 46082141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 50328214 - 50328161
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||  |||||||| ||||| ||||||||||  ||||||||||    
T  50328214 aagagaaatgatatttaaacatccactttgtgacaacttttgcaacaactttct 50328161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 51286440 - 51286387
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||| ||||||  | ||| | ||||||||||||||||||||||    
T  51286440 aagagaaatgatatttgaacatttattttatgacaacttttgtgacaactttct 51286387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 272
Target Start/End: Original strand, 3603102 - 3603162
Alignment:
Q  213 atttaaaa-gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||| ||||||||||||| ||||||||| || || ||||||||||  ||||||||||    
T  3603102 atttaaaatgagaaatgatatttgaacatccatttagtgacaacttttgcaacaactttct 3603162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 8200084 - 8200124
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttt 258  Q
    |||||||||||||||| ||||||||| ||||| ||||||||    
T  8200084 aaagagaaatgatatttgaacatccattttgtgacaacttt 8200124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 8411790 - 8411738
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| ||||||||| || || ||||||||||  ||||||||||    
T  8411790 agagaaatgatatttgaacatccatttagtgacaacttttgcaacaactttct 8411738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 20565190 - 20565138
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| ||||||||| || ||||||| |||||  ||||||||||    
T  20565190 agagaaatgatatttgaacatccatttagtaacaatttttgcaacaactttct 20565138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 26585951 - 26585899
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| ||||||||| || || ||||||||||  ||||||||||    
T  26585951 agagaaatgatatttgaacatccatttagtgacaacttttgcaacaactttct 26585899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 30467598 - 30467546
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| |||||  || ||| | ||||||||||||||||||||||    
T  30467598 agagaaatgatatttgaacagtcattttttgacaacttttgtgacaactttct 30467546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 35529458 - 35529402
Alignment:
Q  214 tttaaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaacttt 270  Q
    |||||||||||||||||||| ||||| ||  |||   ||||||||||||||||||||    
T  35529458 tttaaaagagaaatgatatttgaacaaccgattttagacaacttttgtgacaacttt 35529402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 267
Target Start/End: Original strand, 36775112 - 36775152
Alignment:
Q  227 tgatattggaacatccagtttgtaacaacttttgtgacaac 267  Q
    ||||||| ||||||||| ||| |||||||||||||||||||    
T  36775112 tgatatttgaacatccattttttaacaacttttgtgacaac 36775152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 37899322 - 37899372
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaacttt 270  Q
    |||||||||||||| ||||||||| ||||| ||||||||||||||||||||    
T  37899322 agagaaatgatatttgaacatccattttgtgacaacttttgtgacaacttt 37899372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 41893912 - 41893966
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||| ||||||||| ||| | ||||||||||||||||||||||    
T  41893912 aaagagaaatgatatttgaacatccattttatgacaacttttgtgacaactttct 41893966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 37899285 - 37899233
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| ||||||||| ||||| |||| |||||||||||||||||    
T  37899285 agagaaatgatatttgaacatccattttgtgacaatttttgtgacaactttct 37899233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 39231803 - 39231748
Alignment:
Q  217 aaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||||| |||||||||||| || ||||||||||  ||||||||||    
T  39231803 aaaagagaaatgatatttgaacatccagttagtgacaacttttgcaacaactttct 39231748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 272
Target Start/End: Original strand, 46829475 - 46829530
Alignment:
Q  217 aaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||||| | ||| ||| |||||||||| |||||||||||||||||    
T  46829475 aaaagagaaatgatatttgtacaaccattttgtaacaatttttgtgacaactttct 46829530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 35586847 - 35586793
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||| ||||||||| ||| | | ||||||||||||||||||||    
T  35586847 aaagagaaatgatatttgaacatccattttatgataacttttgtgacaactttct 35586793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 44184633 - 44184579
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||| ||||||| | ||||  ||||||||||||||||||||||    
T  44184633 aaagagaaatgatatttgaacatctattttgcgacaacttttgtgacaactttct 44184579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 12007259 - 12007206
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||| ||||| ||| ||| | ||||||||||||||||||||||    
T  12007259 aagagaaatgatatttgaacaaccattttttgacaacttttgtgacaactttct 12007206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 13729724 - 13729777
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||| ||||||||| ||||| ||||||||||  ||||||||||    
T  13729724 aagagaaatgatatttgaacatccattttgtgacaacttttgcaacaactttct 13729777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 47448824 - 47448877
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||| ||||| ||| ||| | ||||||||||||||||||||||    
T  47448824 aagagaaatgatatttgaacaaccattttttgacaacttttgtgacaactttct 47448877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 2008930 - 2008878
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| ||||| ||| ||| | ||||||||||||||||||||||    
T  2008930 agagaaatgatatttgaacaaccactttttgacaacttttgtgacaactttct 2008878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 272
Target Start/End: Original strand, 16980293 - 16980348
Alignment:
Q  217 aaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||||| |||||| || ||||| ||||||||||  ||||||||||    
T  16980293 aaaagagaaatgatatttgaacattcattttgtgacaacttttgcaacaactttct 16980348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Complemental strand, 36352658 - 36352607
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||  | ||| ||| ||||||||||||||||||||||||||||    
T  36352658 gagaaatgatatatgtacaaccattttgtaacaacttttgtgacaactttct 36352607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 39331985 - 39332036
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| ||||||||| || || ||||||||||| ||||||||||    
T  39331985 gagaaatgatatttgaacatccatttagtgacaacttttgtaacaactttct 39332036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Complemental strand, 43159646 - 43159595
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| ||||| ||| ||| |||||| |||||||||||||||||    
T  43159646 gagaaatgatatttgaacaaccattttttaacaatttttgtgacaactttct 43159595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 33845039 - 33845093
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||| ||| | ||| ||| | ||||||||||||||||||||||    
T  33845039 aaagagaaatgatatttgaataaccactttttgacaacttttgtgacaactttct 33845093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 35823048 - 35822995
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||| | ||||||| ||| |||||| |||| ||||||||||||    
T  35823048 aagagaaatgatatttgtacatccattttctaacaatttttatgacaactttct 35822995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 44895645 - 44895593
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||| ||||| ||| ||| || |||||||||||||||||||||    
T  44895645 aagagaaatgatatttgaacaaccatttttta-caacttttgtgacaactttct 44895593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 156058 - 156002
Alignment:
Q  216 taaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||||| | ||||||| ||||| ||||||| |  |||||||||||    
T  156058 taaaagagaaatgatatttgtacatccactttgtgacaacttcttagacaactttct 156002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 272
Target Start/End: Complemental strand, 1471355 - 1471311
Alignment:
Q  228 gatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||| | ||| ||| ||||||||||||||||||||||||||||    
T  1471355 gatatttgtacaaccattttgtaacaacttttgtgacaactttct 1471311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 9792765 - 9792817
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| ||||| ||| |||  |||||||||||||| ||||||||    
T  9792765 agagaaatgatatttgaacaaccacttttaaacaacttttgtgataactttct 9792817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 13152592 - 13152643
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| ||||| ||| ||| | ||||||||||||||||||||||    
T  13152592 agagaaatgatatttgaacaaccatttt-tgacaacttttgtgacaactttct 13152643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 33180782 - 33180730
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| |||||| || ||||| ||||||||| |||||| |||||    
T  33180782 agagaaatgatatttgaacattcattttgtgacaacttttatgacaattttct 33180730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 42584801 - 42584853
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||  | ||| ||| ||| ||||||||||||||||||||||||    
T  42584801 agagaaatgatatatgtacaaccattttctaacaacttttgtgacaactttct 42584853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 21196121 - 21196175
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||| ||||||||| ||||| ||||||| ||||||||||||||    
T  21196121 aaagagaaatgatatttgaacatccattttgtgacaacttctgtgacaactttct 21196175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 33976469 - 33976420
Alignment:
Q  217 aaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaa 266  Q
    ||||||||||||||||| ||||||||| ||||||||||||||| ||||||    
T  33976469 aaaagagaaatgatatttgaacatccattttgtaacaacttttatgacaa 33976420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 221 - 272
Target Start/End: Complemental strand, 14207329 - 14207278
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| ||||| | | ||||||||||||||||||||||||||||    
T  14207329 gagaaatgatatttgaacaacgattttgtaacaacttttgtgacaactttct 14207278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 221 - 272
Target Start/End: Complemental strand, 14215077 - 14215026
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| ||||| | | ||||||||||||||||||||||||||||    
T  14215077 gagaaatgatatttgaacaacgattttgtaacaacttttgtgacaactttct 14215026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 221 - 272
Target Start/End: Complemental strand, 29573427 - 29573376
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| | ||| ||| ||||||||||||||||||||||||||||    
T  29573427 gagaaatgatatttgtacaaccattttgtaacaacttttgtgacaactttct 29573376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 272
Target Start/End: Complemental strand, 37894326 - 37894263
Alignment:
Q  209 tcttatttaaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||| ||| |||||||||||||||| | ||| ||| ||| ||||||||||||||||||||||||    
T  37894326 tctttttttaaagagaaatgatatttgtacaaccattttctaacaacttttgtgacaactttct 37894263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 221 - 272
Target Start/End: Complemental strand, 37927276 - 37927225
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| ||||||||| || || ||||||||||||||||||||||    
T  37927276 gagaaatgatatttgaacatccatttggtgacaacttttgtgacaactttct 37927225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 272
Target Start/End: Original strand, 46019458 - 46019513
Alignment:
Q  217 aaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||||| ||||||| | ||||  ||||||||||||||||||||||    
T  46019458 aaaagagaaatgatatttgaacatctattttgcgacaacttttgtgacaactttct 46019513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 48352996 - 48353047
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| | ||||||| ||| ||||||||||||||||||||||||    
T  48352996 gagaaatgatatttgtacatccattttttaacaacttttgtgacaactttct 48353047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 51973442 - 51973388
Alignment:
Q  217 aaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||||| ||||||||| ||||  ||||||||||||||||||||||    
T  51973442 aaaagagaaatgatatttgaacatcca-tttggtacaacttttgtgacaactttct 51973388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 55399999 - 55400050
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| ||||||||| ||| | ||||||||||||||||||||||    
T  55399999 gagaaatgatatttgaacatccattttatgacaacttttgtgacaactttct 55400050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 26996313 - 26996367
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||| |||||| || || |||||||||||||| ||||||||||    
T  26996313 aaagagaaatgatatttgaacattcatttagtaacaacttttgtaacaactttct 26996367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 49983429 - 49983371
Alignment:
Q  214 tttaaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||| ||||||||||||||| ||||||||| || || |||||||||| |||||||||||    
T  49983429 tttacaagagaaatgatatttgaacatccatttggttacaacttttgggacaactttct 49983371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 31376838 - 31376785
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||| |||||||||| ||||||||| ||||| ||||||||||| ||||||||||    
T  31376838 aagataaatgatatttgaacatccattttgtgacaacttttgttacaactttct 31376785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 31931092 - 31931039
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||| ||||||||| ||||||||| ||| |||||||||||||||||| |||||    
T  31931092 aagagtaatgatatttgaacatccattttttaacaacttttgtgacaattttct 31931039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 49417573 - 49417626
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||| ||||||| | ||| | ||||||||||||||||||||||    
T  49417573 aagagaaatgatatttgaacatctattttatgacaacttttgtgacaactttct 49417626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 54099430 - 54099377
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||| ||||| | ||||||| ||| ||||||||||||||||||||||||    
T  54099430 aagagaaataatatttgtacatccattttctaacaacttttgtgacaactttct 54099377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 10811134 - 10811186
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| ||||| ||| ||| | ||||||||||||||||||||||    
T  10811134 agagaaatgatatttgaacaaccattttatgacaacttttgtgacaactttct 10811186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 272
Target Start/End: Original strand, 11633608 - 11633664
Alignment:
Q  216 taaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||||| ||||||||| || | |||||||||||  ||||||||||    
T  11633608 taaaagagaaatgatatttgaacatccatttagcaacaacttttgcaacaactttct 11633664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 50207042 - 50206990
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| ||||||||| ||||| ||||||||||  ||||||||||    
T  50207042 agagaaatgatatttgaacatccattttgtgacaacttttgcaacaactttct 50206990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Complemental strand, 24483034 - 24482983
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| ||||||||| ||||| ||||||||||  ||||||||||    
T  24483034 gagaaatgatatttgaacatccattttgtgacaacttttgcaacaactttct 24482983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 268
Target Start/End: Complemental strand, 31350681 - 31350630
Alignment:
Q  217 aaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaact 268  Q
    |||||||||||||||||  |||||||| ||| |||||| |||||||||||||    
T  31350681 aaaagagaaatgatattttaacatccattttttaacaatttttgtgacaact 31350630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Complemental strand, 34058024 - 34057973
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| ||||||||| ||| | | ||||||||||||||||||||    
T  34058024 gagaaatgatatttgaacatccattttatgataacttttgtgacaactttct 34057973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 45054974 - 45055025
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| ||||||||| ||| | ||||||||||| ||||||||||    
T  45054974 gagaaatgatatttgaacatccattttctgacaacttttgttacaactttct 45055025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 49021711 - 49021762
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| | ||||||| ||| ||| ||||||||||||||||||||    
T  49021711 gagaaatgatatttgtacatccattttttaataacttttgtgacaactttct 49021762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 268
Target Start/End: Original strand, 49875796 - 49875843
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaact 268  Q
    |||||||||||||  |||||||| ||| ||||||||||||||||||||    
T  49875796 gagaaatgatattttaacatccattttttaacaacttttgtgacaact 49875843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 10207047 - 10206993
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||| ||||||||| || || ||||||||||  ||||||||||    
T  10207047 aaagagaaatgatatttgaacatccatttagtgacaacttttgcaacaactttct 10206993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 16479629 - 16479682
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||| | ||| ||| |||||| |||||||||||||||||||||    
T  16479629 aaagagaaatgatatttgtacaaccattttgta-caacttttgtgacaactttct 16479682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 27168756 - 27168702
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||| ||||| ||| ||| ||| || |||||||||||||||||    
T  27168756 aaagagaaatgatatttgaacaaccattttttaataatttttgtgacaactttct 27168702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 267
Target Start/End: Original strand, 37143125 - 37143167
Alignment:
Q  225 aatgatattggaacatccagtttgtaacaacttttgtgacaac 267  Q
    ||||||||| ||||||||| ||| |||||||||||||||||||    
T  37143125 aatgatatttgaacatccattttttaacaacttttgtgacaac 37143167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 54773828 - 54773774
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||| ||||||||| || || ||||||||| | ||||||||||    
T  54773828 aaagagaaatgatatttgaacatccatttagtgacaacttttataacaactttct 54773774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 21195964 - 21195911
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||| |||||||||| || |||||| || || ||||||||||||||||||||||    
T  21195964 aagaaaaatgatatttgagcatccatttggtgacaacttttgtgacaactttct 21195911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 31425538 - 31425579
Alignment:
Q  225 aatgatattggaacatccagtttgtaacaacttttgtgacaa 266  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||    
T  31425538 aatgatatttgaacatccattttttaacaacttttgtgacaa 31425579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 48405408 - 48405461
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||| | ||| ||| ||||| ||||||||||| ||||||||||    
T  48405408 aagagaaatgatatttgtacaaccattttgtgacaacttttgtaacaactttct 48405461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 49761315 - 49761356
Alignment:
Q  217 aaaagagaaatgatattggaacatccagtttgtaacaacttt 258  Q
    ||||||||||||||||| ||||||||| ||||| ||||||||    
T  49761315 aaaagagaaatgatatttgaacatccattttgtgacaacttt 49761356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 8821629 - 8821681
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| ||||||| | || || ||||||||||| ||||||||||    
T  8821629 agagaaatgatatttgaacatctatttagtgacaacttttgtaacaactttct 8821681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 9862532 - 9862584
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| ||||| ||| ||| |  |||||||||||||||||||||    
T  9862532 agagaaatgatatttgaacaaccattttttgtcaacttttgtgacaactttct 9862584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 19150391 - 19150339
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| | |||  || ||| ||||||||||||||||||||||||    
T  19150391 agagaaatgatatttgtacaatcattttttaacaacttttgtgacaactttct 19150339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 24095478 - 24095426
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| ||||||||| ||| | | || |||||||||||||||||    
T  24095478 agagaaatgatatttgaacatccattttatgataatttttgtgacaactttct 24095426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 44963895 - 44963839
Alignment:
Q  216 taaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||| |||||||||  |||||  || ||| ||||||||||||||||||||||||    
T  44963895 taaaagataaatgatatctgaacaatcattttctaacaacttttgtgacaactttct 44963839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 45293105 - 45293049
Alignment:
Q  216 taaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||||||  |||| | | |||  |||||||||||||||||||||||    
T  45293105 taaaagagaaatgatatttaaacaactatttttaaacaacttttgtgacaactttct 45293049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 46623906 - 46623957
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| ||||| ||| ||| || |||||||||||||||||||||    
T  46623906 agagaaatgatatttgaacaaccatttttta-caacttttgtgacaactttct 46623957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 272
Target Start/End: Original strand, 49167753 - 49167801
Alignment:
Q  224 aaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||| ||||||||| ||  | ||||||||||||||||||||||    
T  49167753 aaatgatatttgaacatccatttgatgacaacttttgtgacaactttct 49167801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 52939652 - 52939703
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| ||||| ||| ||| || |||||||||||||||||||||    
T  52939652 agagaaatgatatttgaacaaccatttttta-caacttttgtgacaactttct 52939703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 30977886 - 30977940
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||| ||||||||| ||||| ||||||||| ||||||||||||    
T  30977886 aaagagaaatgatatttgaacatccattttgtgacaacttttatgacaactttct 30977940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 39449189 - 39449137
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| ||||||||| ||||| ||||||||||| ||||||||||    
T  39449189 agagaaatgatatttgaacatccattttgtgacaacttttgttacaactttct 39449137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 43057063 - 43057115
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| ||||| ||| ||| ||||||||||||||||||||||||    
T  43057063 agagaaatgatatttgaacaaccactttttaacaacttttgtgacaactttct 43057115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 670542 - 670487
Alignment:
Q  217 aaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||||| ||||||||| || || ||||||||||| ||||||||||    
T  670542 aaaagagaaatgatatttgaacatccatttagtgacaacttttgtaacaactttct 670487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 272
Target Start/End: Original strand, 2841830 - 2841885
Alignment:
Q  217 aaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||||| || |||||| ||||| ||||||||||| ||||||||||    
T  2841830 aaaagagaaatgatatttgatcatccattttgtgacaacttttgttacaactttct 2841885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 221 - 272
Target Start/End: Complemental strand, 6999139 - 6999088
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| ||||||||| ||| | ||||||||||||||||||||||    
T  6999139 gagaaatgatatttgaacatccattttatgacaacttttgtgacaactttct 6999088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 13765400 - 13765451
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| ||||||||| ||| | ||||||||||||||||||||||    
T  13765400 gagaaatgatatttgaacatccattttatgacaacttttgtgacaactttct 13765451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 2464322 - 2464269
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||| ||||||||| ||||  ||||||||||||||||||||||    
T  2464322 aaagagaaatgatatttgaacatcca-tttgatacaacttttgtgacaactttct 2464269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 6336249 - 6336303
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||| | ||| ||| ||| ||||||||||||||||||||||||    
T  6336249 aaagagaaatgatatttgtacaaccattttctaacaacttttgtgacaactttct 6336303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 12498708 - 12498658
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaacttt 270  Q
    |||||||||||||| ||||||||| || ||||||| |||||||||||||||    
T  12498708 agagaaatgatatttgaacatccatttggtaacaatttttgtgacaacttt 12498658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 5031921 - 5031974
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||| | ||| ||| |||||||||||||||| |||||||||||    
T  5031921 aagagaaatgatatttgtacaaccattttgtaacaacttttgcgacaactttct 5031974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 14233788 - 14233739
Alignment:
Q  223 gaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||| ||||||||| ||||| |||||||||||||||| |||||    
T  14233788 gaaatgatatttgaacatccattttgtgacaacttttgtgacaaatttct 14233739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 18737947 - 18737894
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||| | | ||||| ||| ||||||||||||||||||||||||    
T  18737947 aagagaaatgatatttgtatatccattttttaacaacttttgtgacaactttct 18737894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 272
Target Start/End: Original strand, 2563707 - 2563755
Alignment:
Q  224 aaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||| ||||||||| ||| | ||||||||||||||||||||||    
T  2563707 aaatgatatttgaacatccattttatgacaacttttgtgacaactttct 2563755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 270
Target Start/End: Original strand, 7648389 - 7648440
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaacttt 270  Q
    |||||||||||||||| ||||||||| ||||| |||| |||||||||||||||    
T  7648389 aaagagaaatgatatttgaacatcca-tttgtgacaatttttgtgacaacttt 7648440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 272
Target Start/End: Original strand, 9194432 - 9194480
Alignment:
Q  224 aaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||| ||||||||| ||||| ||||||||| ||||||||||||    
T  9194432 aaatgatatttgaacatccattttgtgacaacttttatgacaactttct 9194480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 270
Target Start/End: Complemental strand, 17395150 - 17395098
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaacttt 270  Q
    ||||| |||||||||| ||||||| | ||||||||||| ||||||||||||||    
T  17395150 aaagataaatgatatttgaacatctaatttgtaacaacctttgtgacaacttt 17395098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 36802895 - 36802947
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| ||||||||| ||||| ||||||||||  ||||||||||    
T  36802895 agagaaatgatatttgaacatccattttgtgacaacttttgctacaactttct 36802947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 6170630 - 6170681
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||  |||||||| ||| | ||||||||||||||||||||||    
T  6170630 gagaaatgatatttcaacatccattttatgacaacttttgtgacaactttct 6170681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 15269861 - 15269912
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| ||||||||| ||| | |||| |||||||||||||||||    
T  15269861 gagaaatgatatttgaacatccattttatgacaatttttgtgacaactttct 15269912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 18723594 - 18723645
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| ||||||||| ||||| |||| |||||| ||||||||||    
T  18723594 gagaaatgatatttgaacatccattttgtgacaatttttgttacaactttct 18723645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 28245728 - 28245779
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| ||||||| | ||||  ||||||||||||||||||||||    
T  28245728 gagaaatgatatttgaacatctattttgcgacaacttttgtgacaactttct 28245779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 216 - 267
Target Start/End: Original strand, 29711974 - 29712024
Alignment:
Q  216 taaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaac 267  Q
    |||||||||||||||||| ||||||||| ||||| |||| ||||||||||||    
T  29711974 taaaagagaaatgatatttgaacatccattttgtgacaa-ttttgtgacaac 29712024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Complemental strand, 31922364 - 31922313
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| ||||| ||||||| | |||| |||||||||||||||||    
T  31922364 gagaaatgatattcgaacaaccagtttttgacaatttttgtgacaactttct 31922313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 37731275 - 37731220
Alignment:
Q  217 aaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||||| ||||| ||| ||| | |||||||||||||||| |||||    
T  37731275 aaaagagaaatgatatttgaacaaccactttttgacaacttttgtgacaattttct 37731220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 38560678 - 38560729
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||  ||||| || ||||||||||||||||| ||||||||||    
T  38560678 gagaaatgatattttaacattcattttgtaacaacttttgttacaactttct 38560729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 272
Target Start/End: Original strand, 44254595 - 44254650
Alignment:
Q  217 aaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||||| |||||| || | ||| ||||||||||| ||||||||||    
T  44254595 aaaagagaaatgatatttgaacattcattctgtgacaacttttgttacaactttct 44254650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 5200299 - 5200245
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||| |||||| ||||||||| || ||||||| ||||||||||| |||||    
T  5200299 aaagagaaaggatatttgaacatccatttagtaacaatttttgtgacaattttct 5200245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 27490804 - 27490751
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||| ||||| ||| ||| | ||||||||||||||||||||||    
T  27490804 aaagagaaatgatatttgaacaaccatttt-tgacaacttttgtgacaactttct 27490751  T

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Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 28679313 - 28679367
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||| ||||| ||||||||| || || |||||||||| |||||||||||    
T  28679313 aaagagaaataatatttgaacatccatttggtgacaacttttgcgacaactttct 28679367  T

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Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 34134849 - 34134791
Alignment:
Q  214 tttaaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||| |||||||||||||   ||| ||| ||||||||||||||| ||||||||||||    
T  34134849 tttaaatgagaaatgatatttttacaaccattttgtaacaacttttctgacaactttct 34134791  T

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Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 39449264 - 39449318
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||| ||| ||||| ||||| ||||||||||  ||||||||||    
T  39449264 aaagagaaatgatatttgaatatccattttgtgacaacttttgcaacaactttct 39449318  T

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Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 41042253 - 41042302
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaacttt 270  Q
    |||||||||||||| ||||| ||| ||| ||||||||||||||||||||||    
T  41042253 agagaaatgatatttgaacaaccatttt-taacaacttttgtgacaacttt 41042302  T

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Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 6646831 - 6646872
Alignment:
Q  217 aaaagagaaatgatattggaacatccagtttgtaacaacttt 258  Q
    ||||||||||||||||| ||||||||| ||||| ||||||||    
T  6646831 aaaagagaaatgatatttgaacatccattttgtgacaacttt 6646872  T

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Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 22526067 - 22526014
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||| |||||||||| ||||||||| ||| | |||| |||||||||||||||||    
T  22526067 aagaaaaatgatatttgaacatccattttttgacaatttttgtgacaactttct 22526014  T

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Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 38821364 - 38821417
Alignment:
Q  219 aagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||| ||||| ||| ||| | |||||||||||||||| |||||    
T  38821364 aagagaaatgatatttgaacaaccattttatgacaacttttgtgacaattttct 38821417  T

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Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 270
Target Start/End: Complemental strand, 9634510 - 9634458
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaacttt 270  Q
    |||||||||||||||| ||||||||| ||| | | || |||||||||||||||    
T  9634510 aaagagaaatgatatttgaacatccattttatgataatttttgtgacaacttt 9634458  T

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Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 18254281 - 18254230
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| ||||| ||| ||| || |||||||||||||||||||||    
T  18254281 agagaaatgatatttgaacaaccatttttta-caacttttgtgacaactttct 18254230  T

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Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 260
Target Start/End: Complemental strand, 35589459 - 35589419
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttg 260  Q
    |||||||||||||| ||||||||| ||||| ||||||||||    
T  35589459 agagaaatgatatttgaacatccattttgtgacaacttttg 35589419  T

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Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 43666751 - 43666699
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| ||||||||| ||    ||||||||||||||||||||||    
T  43666751 agagaaatgatatttgaacatccatttaacgacaacttttgtgacaactttct 43666699  T

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Target: scaffold0532 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 10964 - 11015
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| ||||||||| ||||  ||||||||||||||||||||||    
T  10964 gagaaatgatatttgaacatccattttgggacaacttttgtgacaactttct 11015  T

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Target: scaffold0128 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 272
Target Start/End: Original strand, 10932 - 10987
Alignment:
Q  217 aaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||||| | ||||| ||| ||| | ||||||||||||||||||||||    
T  10932 aaaagagaaatgataattgaacaaccactttttgacaacttttgtgacaactttct 10987  T

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Target: scaffold0005 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 272
Target Start/End: Complemental strand, 223550 - 223499
Alignment:
Q  221 gagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    ||||||||||||| ||| ||||| ||||| ||||||||||| ||||||||||    
T  223550 gagaaatgatatttgaatatccattttgtgacaacttttgttacaactttct 223499  T

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Target: scaffold0432 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 6592 - 6542
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaacttt 270  Q
    |||||||||||||| |||||  || ||| ||||||||||||||||||||||    
T  6592 agagaaatgatatttgaacaatcattttttaacaacttttgtgacaacttt 6542  T

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Target: scaffold0110 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 28401 - 28347
Alignment:
Q  218 aaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||||| ||||| ||| ||| | | ||||||||||||||||||||    
T  28401 aaagagaaatgatatttgaacaaccactttttgataacttttgtgacaactttct 28347  T

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Target: scaffold0034 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 101984 - 101926
Alignment:
Q  214 tttaaaagagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||| ||||||||||||||  ||||| ||| ||| | ||||||||||||||||||||||    
T  101984 tttagaagagaaatgatatctgaacaaccattttttgacaacttttgtgacaactttct 101926  T

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Target: scaffold1956 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1956
Description:

Target: scaffold1956; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 770 - 822
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| ||||||||| ||| | | || |||||||||||||||||    
T  770 agagaaatgatatttgaacatccattttttgataatttttgtgacaactttct 822  T

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Target: scaffold0321 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 19635 - 19687
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||||||||| ||||||||| || || ||||||||||  ||||||||||    
T  19635 agagaaatgatatttgaacatccatttagtgacaacttttgcaacaactttct 19687  T

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Target: scaffold0136 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 38424 - 38476
Alignment:
Q  220 agagaaatgatattggaacatccagtttgtaacaacttttgtgacaactttct 272  Q
    |||||||| ||||| |||||| || ||| | ||||||||||||||||||||||    
T  38424 agagaaataatatttgaacattcattttatgacaacttttgtgacaactttct 38476  T

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