View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11745_high_151 (Length: 263)
Name: NF11745_high_151
Description: NF11745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11745_high_151 |
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Alignment Details
Target: chr7 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 10165026 - 10165115
Alignment:
| Q |
1 |
tgaactgaaatgacaccgaaacaagaaggaaaagtaaaaacaattttgcatcaagaccgaccaacaaatcaaatgttgtactaagacgac |
90 |
Q |
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| T |
10165026 |
tgaactgaaatgacaccgaaacaagaaggaaaagtaaaaacaactttgcatcaagaccgaccaacaaatcaaatgttgtactaagacgac |
10165115 |
T |
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Target: chr7; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 177 - 250
Target Start/End: Original strand, 10165202 - 10165275
Alignment:
| Q |
177 |
ggccttaaacttctctgaagaaatatagaggtgaacattgaacaacctttctctcatgccttttgtcctgctct |
250 |
Q |
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| T |
10165202 |
ggccttaaacttctctgaagaaatatagaggtgaacattgaacaacctttctctcatgccttttgtcctgctct |
10165275 |
T |
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