View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11745_high_154 (Length: 259)
Name: NF11745_high_154
Description: NF11745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11745_high_154 |
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Alignment Details
Target: chr3 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 28 - 248
Target Start/End: Complemental strand, 47324641 - 47324421
Alignment:
| Q |
28 |
ttatgatcacaaggtaggttttccacaagtggaatattaacattgtctactacctttgactttgaacaaacattgccaaatagccacgtggcatccattt |
127 |
Q |
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| T |
47324641 |
ttatgatcacaaggtaggttttccacaagtggaatattaacattgtctactacctttgactttgaacaaacatcgccaaatagccacgtggcatccattt |
47324542 |
T |
|
| Q |
128 |
gtttgcagaacatcttcgcagcatgatatgaaaccttaacatgcttgttctcatttgacttaacaaaaccattcataaacattatacaatccataagact |
227 |
Q |
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| T |
47324541 |
gtttgcagaacatcttcgcagcatgatatgaaaccttaacatgtttgttctcatttgacttaacaaaaccattcataaacattatacaatccataagact |
47324442 |
T |
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| Q |
228 |
ctctttagccattcctttcat |
248 |
Q |
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| T |
47324441 |
ctctttagccattcctttcat |
47324421 |
T |
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