View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11745_high_201 (Length: 239)
Name: NF11745_high_201
Description: NF11745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11745_high_201 |
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Alignment Details
Target: chr7 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 13 - 224
Target Start/End: Original strand, 44527871 - 44528081
Alignment:
| Q |
13 |
attggatcatttgtttgacttttacaaatcatatggagacacatttcagaaaggagtctcctggttgtattcaagtgatttggctagcttgtatcttgat |
112 |
Q |
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| T |
44527871 |
attggatcatttgtttgacttttacaaatcatatggagacacattt-agaaaggagtctccttgttgtattcaagtgatttggctagcttgtatcttgat |
44527969 |
T |
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| Q |
113 |
catttgaaaagagcgcaattcaaaacaattatcaacaacacaattttatttggatcgattacttgagcagatcaaactttatttgtggtgatgattgaag |
212 |
Q |
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|||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44527970 |
catttgaaaatagcgcaattcaaaaaaattatcaacaacacagttttatttggatcaattacttgagcagatcaaactttatttgtggtgatgattgaag |
44528069 |
T |
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| Q |
213 |
actttcaaacct |
224 |
Q |
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|||||||||||| |
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| T |
44528070 |
actttcaaacct |
44528081 |
T |
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