View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11745_high_61 (Length: 413)

Name: NF11745_high_61
Description: NF11745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11745_high_61
NF11745_high_61
[»] chr3 (63 HSPs)
chr3 (1-397)||(52421007-52421403)
chr3 (181-280)||(34707696-34707795)
chr3 (174-263)||(43079934-43080023)
chr3 (181-272)||(10667402-10667493)
chr3 (174-277)||(40240563-40240666)
chr3 (181-244)||(40581096-40581159)
chr3 (174-280)||(52021243-52021350)
chr3 (189-280)||(53218023-53218114)
chr3 (179-263)||(22809193-22809278)
chr3 (179-263)||(2086691-2086775)
chr3 (186-272)||(10521163-10521249)
chr3 (189-263)||(29270373-29270447)
chr3 (179-244)||(3870245-3870310)
chr3 (182-261)||(3845860-3845939)
chr3 (186-280)||(42956162-42956256)
chr3 (155-263)||(45331295-45331404)
chr3 (179-244)||(51409395-51409460)
chr3 (181-256)||(10448778-10448853)
chr3 (186-272)||(585029-585115)
chr3 (179-277)||(3645305-3645402)
chr3 (186-244)||(5129834-5129892)
chr3 (181-259)||(7292684-7292762)
chr3 (179-277)||(29614196-29614293)
chr3 (186-247)||(21296775-21296836)
chr3 (193-262)||(23816172-23816240)
chr3 (179-280)||(28741197-28741298)
chr3 (179-259)||(32900732-32900812)
chr3 (188-278)||(36182514-36182605)
chr3 (182-280)||(43971830-43971928)
chr3 (179-244)||(3876282-3876347)
chr3 (181-263)||(4257300-4257383)
chr3 (186-262)||(10272131-10272205)
chr3 (204-261)||(37243493-37243550)
chr3 (187-263)||(47403762-47403839)
chr3 (156-280)||(48597850-48597975)
chr3 (207-271)||(20365427-20365491)
chr3 (188-272)||(37456425-37456508)
chr3 (179-270)||(4974313-4974404)
chr3 (179-277)||(20894505-20894602)
chr3 (171-237)||(30198982-30199048)
chr3 (186-244)||(30473162-30473220)
chr3 (226-280)||(37778182-37778236)
chr3 (191-244)||(11528905-11528958)
chr3 (189-244)||(29002726-29002779)
chr3 (186-242)||(36266253-36266309)
chr3 (186-242)||(41601352-41601408)
chr3 (307-342)||(23555532-23555567)
chr3 (181-243)||(24842126-24842189)
chr3 (186-240)||(25341291-25341348)
chr3 (168-207)||(27769762-27769801)
chr3 (171-237)||(37601053-37601120)
chr3 (186-245)||(38524097-38524156)
chr3 (187-246)||(51662814-51662873)
chr3 (181-243)||(27769650-27769711)
chr3 (186-240)||(29830793-29830847)
chr3 (187-249)||(54547812-54547873)
chr3 (187-280)||(1516081-1516173)
chr3 (203-244)||(15444002-15444043)
chr3 (312-385)||(20685697-20685770)
chr3 (179-243)||(16687087-16687150)
chr3 (186-214)||(23555493-23555521)
chr3 (188-280)||(32901131-32901223)
chr3 (170-214)||(50502014-50502058)
[»] chr1 (71 HSPs)
chr1 (171-280)||(6337739-6337849)
chr1 (189-280)||(15515330-15515421)
chr1 (174-280)||(48819296-48819402)
chr1 (156-280)||(1005318-1005443)
chr1 (186-280)||(4068124-4068218)
chr1 (174-272)||(31378742-31378840)
chr1 (159-263)||(16888966-16889070)
chr1 (187-263)||(26988158-26988234)
chr1 (186-280)||(37329395-37329489)
chr1 (174-263)||(3069854-3069943)
chr1 (192-277)||(41196696-41196781)
chr1 (181-280)||(35590134-35590233)
chr1 (179-244)||(18327526-18327591)
chr1 (179-278)||(28690004-28690105)
chr1 (179-263)||(5243404-5243487)
chr1 (179-263)||(15791386-15791469)
chr1 (186-262)||(37712077-37712152)
chr1 (186-280)||(9572767-9572862)
chr1 (174-272)||(45267462-45267561)
chr1 (188-263)||(46501001-46501076)
chr1 (186-244)||(10850090-10850148)
chr1 (186-244)||(13038956-13039014)
chr1 (178-280)||(22593390-22593492)
chr1 (179-277)||(32497258-32497355)
chr1 (179-244)||(1565401-1565466)
chr1 (179-240)||(36423004-36423065)
chr1 (188-263)||(26946104-26946180)
chr1 (181-244)||(10082254-10082317)
chr1 (179-246)||(28122618-28122685)
chr1 (187-277)||(17628411-17628500)
chr1 (179-261)||(26435177-26435258)
chr1 (186-244)||(39941450-39941508)
chr1 (191-261)||(42591396-42591466)
chr1 (186-243)||(10365180-10365237)
chr1 (174-239)||(26936856-26936920)
chr1 (181-297)||(49971255-49971372)
chr1 (171-240)||(51409730-51409799)
chr1 (179-263)||(20169266-20169350)
chr1 (205-261)||(23544819-23544875)
chr1 (181-240)||(35897646-35897705)
chr1 (181-243)||(41003391-41003454)
chr1 (187-277)||(15631914-15632004)
chr1 (186-244)||(39941379-39941436)
chr1 (186-244)||(39941519-39941577)
chr1 (179-244)||(35282613-35282678)
chr1 (179-244)||(37148112-37148177)
chr1 (179-244)||(37156937-37157002)
chr1 (179-244)||(51162271-51162336)
chr1 (179-233)||(391170-391225)
chr1 (194-241)||(1265715-1265762)
chr1 (181-244)||(26542977-26543040)
chr1 (189-259)||(47413385-47413454)
chr1 (179-272)||(17814193-17814285)
chr1 (174-263)||(41129991-41130080)
chr1 (180-243)||(1321545-1321608)
chr1 (200-256)||(5610531-5610587)
chr1 (181-277)||(13412439-13412534)
chr1 (179-259)||(25485750-25485830)
chr1 (207-263)||(39658323-39658379)
chr1 (188-244)||(46473105-46473161)
chr1 (158-240)||(8410129-8410211)
chr1 (203-242)||(9177732-9177771)
chr1 (188-272)||(19284907-19284993)
chr1 (307-338)||(45267452-45267483)
chr1 (181-263)||(5347159-5347240)
chr1 (179-272)||(3116053-3116145)
chr1 (168-205)||(36259225-36259262)
chr1 (186-263)||(50919497-50919573)
chr1 (208-244)||(18317032-18317068)
chr1 (188-244)||(19220185-19220240)
chr1 (174-222)||(36178533-36178580)
[»] chr5 (81 HSPs)
chr5 (174-279)||(28625477-28625582)
chr5 (181-280)||(12986997-12987096)
chr5 (188-280)||(6144749-6144841)
chr5 (186-280)||(12467273-12467368)
chr5 (156-335)||(42706774-42706958)
chr5 (186-263)||(41534632-41534709)
chr5 (181-280)||(13060585-13060684)
chr5 (181-263)||(1473360-1473442)
chr5 (189-280)||(11912085-11912176)
chr5 (158-280)||(41059772-41059895)
chr5 (189-279)||(1868858-1868948)
chr5 (179-278)||(22201917-22202020)
chr5 (179-244)||(10537238-10537303)
chr5 (187-244)||(24030225-24030282)
chr5 (187-244)||(42852032-42852089)
chr5 (186-242)||(29922210-29922266)
chr5 (181-280)||(17657246-17657345)
chr5 (192-263)||(31637094-31637165)
chr5 (179-280)||(40452460-40452562)
chr5 (179-280)||(1576633-1576733)
chr5 (179-280)||(1608082-1608182)
chr5 (179-272)||(2878668-2878760)
chr5 (207-280)||(41419531-41419604)
chr5 (180-240)||(43268644-43268704)
chr5 (158-240)||(1942990-1943073)
chr5 (186-249)||(3977484-3977547)
chr5 (179-242)||(17128280-17128343)
chr5 (174-280)||(35536839-35536948)
chr5 (186-280)||(7364292-7364386)
chr5 (174-240)||(40696998-40697064)
chr5 (188-277)||(11991316-11991404)
chr5 (179-260)||(33757090-33757170)
chr5 (188-277)||(38461268-38461357)
chr5 (186-277)||(26003006-26003097)
chr5 (181-280)||(43319007-43319106)
chr5 (181-263)||(15122549-15122630)
chr5 (178-280)||(28357353-28357455)
chr5 (179-244)||(13625540-13625605)
chr5 (186-242)||(2670084-2670140)
chr5 (188-267)||(342001-342080)
chr5 (179-242)||(11163290-11163353)
chr5 (181-244)||(36106758-36106821)
chr5 (186-237)||(43265967-43266018)
chr5 (188-278)||(6125298-6125387)
chr5 (181-263)||(15709892-15709973)
chr5 (179-244)||(17868195-17868261)
chr5 (171-280)||(28357132-28357244)
chr5 (188-257)||(3520509-3520577)
chr5 (186-263)||(11706918-11706995)
chr5 (179-260)||(33667396-33667476)
chr5 (200-244)||(5559941-5559985)
chr5 (200-280)||(23087762-23087842)
chr5 (193-244)||(18602618-18602669)
chr5 (171-280)||(29659055-29659163)
chr5 (179-277)||(5203420-5203517)
chr5 (181-263)||(7984109-7984191)
chr5 (180-278)||(29418737-29418835)
chr5 (196-246)||(32508156-32508206)
chr5 (186-271)||(6025977-6026061)
chr5 (200-237)||(6150400-6150437)
chr5 (179-272)||(15413994-15414087)
chr5 (171-272)||(27805910-27806010)
chr5 (179-255)||(4728848-4728923)
chr5 (156-207)||(28357254-28357306)
chr5 (188-243)||(1372013-1372068)
chr5 (188-259)||(40152880-40152951)
chr5 (307-338)||(40696988-40697019)
chr5 (189-244)||(42558740-42558794)
chr5 (181-255)||(17668404-17668477)
chr5 (185-247)||(32131332-32131394)
chr5 (188-246)||(43010646-43010704)
chr5 (211-244)||(2577448-2577481)
chr5 (179-208)||(3520452-3520481)
chr5 (186-269)||(7110981-7111060)
chr5 (179-244)||(14243825-14243890)
chr5 (181-242)||(22573657-22573718)
chr5 (179-240)||(25332261-25332322)
chr5 (202-243)||(29658074-29658115)
chr5 (186-243)||(30852180-30852237)
chr5 (186-240)||(33803814-33803870)
chr5 (215-244)||(39154780-39154809)
[»] chr4 (77 HSPs)
chr4 (180-280)||(28074368-28074467)
chr4 (149-244)||(7148743-7148839)
chr4 (179-280)||(23297440-23297538)
chr4 (186-280)||(29877648-29877742)
chr4 (179-280)||(12495627-12495730)
chr4 (174-280)||(488367-488473)
chr4 (174-280)||(36740901-36741007)
chr4 (179-272)||(35124389-35124482)
chr4 (179-280)||(48591407-48591508)
chr4 (171-280)||(55638064-55638173)
chr4 (172-244)||(896965-897037)
chr4 (174-280)||(52274103-52274209)
chr4 (200-272)||(17222852-17222924)
chr4 (187-271)||(18424270-18424353)
chr4 (179-263)||(23335644-23335728)
chr4 (174-272)||(825679-825777)
chr4 (179-280)||(948074-948176)
chr4 (181-263)||(27368152-27368234)
chr4 (174-280)||(39932737-39932843)
chr4 (171-272)||(8601195-8601296)
chr4 (187-280)||(38345805-38345897)
chr4 (187-244)||(43699502-43699559)
chr4 (188-260)||(2494403-2494475)
chr4 (179-263)||(46175979-46176062)
chr4 (200-263)||(21216328-21216391)
chr4 (186-280)||(8057071-8057165)
chr4 (188-262)||(35010222-35010296)
chr4 (179-243)||(3564222-3564286)
chr4 (181-277)||(4603318-4603413)
chr4 (191-263)||(41228917-41228989)
chr4 (188-260)||(52700547-52700619)
chr4 (181-244)||(212967-213029)
chr4 (157-263)||(2141620-2141727)
chr4 (186-277)||(46650280-46650371)
chr4 (193-280)||(46704253-46704340)
chr4 (190-244)||(4331350-4331404)
chr4 (156-241)||(29615352-29615438)
chr4 (186-272)||(43415280-43415366)
chr4 (194-263)||(2405205-2405273)
chr4 (179-240)||(8130490-8130551)
chr4 (179-280)||(15184549-15184649)
chr4 (181-261)||(42611870-42611950)
chr4 (184-237)||(48686956-48687009)
chr4 (179-259)||(42617234-42617313)
chr4 (181-244)||(1374382-1374445)
chr4 (188-263)||(10794910-10794984)
chr4 (192-263)||(32628793-32628864)
chr4 (198-244)||(29997329-29997375)
chr4 (187-244)||(30956692-30956750)
chr4 (179-244)||(7206605-7206670)
chr4 (210-263)||(28663606-28663659)
chr4 (179-244)||(40699358-40699423)
chr4 (164-244)||(43983401-43983482)
chr4 (179-259)||(19725295-19725375)
chr4 (188-263)||(10796397-10796471)
chr4 (197-280)||(18630878-18630961)
chr4 (205-280)||(36255019-36255094)
chr4 (179-277)||(47202828-47202925)
chr4 (179-240)||(11298595-11298656)
chr4 (186-255)||(26206362-26206431)
chr4 (174-207)||(34633503-34633536)
chr4 (179-259)||(2548051-2548131)
chr4 (227-278)||(22273830-22273881)
chr4 (158-244)||(22397324-22397411)
chr4 (307-338)||(28663415-28663446)
chr4 (181-244)||(33533932-33533995)
chr4 (307-338)||(36740891-36740922)
chr4 (188-263)||(43740076-43740150)
chr4 (192-263)||(45018548-45018619)
chr4 (186-224)||(29996678-29996716)
chr4 (309-338)||(488454-488483)
chr4 (181-258)||(9201655-9201731)
chr4 (179-272)||(15179820-15179912)
chr4 (189-226)||(38515689-38515726)
chr4 (181-245)||(22117358-22117421)
chr4 (280-334)||(40699456-40699512)
chr4 (209-261)||(42153193-42153245)
[»] chr2 (63 HSPs)
chr2 (180-280)||(4026929-4027028)
chr2 (186-277)||(33321298-33321389)
chr2 (186-280)||(13056310-13056404)
chr2 (179-244)||(25836731-25836796)
chr2 (181-280)||(755724-755824)
chr2 (159-280)||(887393-887515)
chr2 (174-260)||(12223849-12223935)
chr2 (179-280)||(11776986-11777087)
chr2 (179-280)||(38216025-38216122)
chr2 (179-280)||(4090491-4090592)
chr2 (179-244)||(34913409-34913474)
chr2 (195-280)||(36501498-36501583)
chr2 (165-244)||(12238502-12238582)
chr2 (181-277)||(21788461-21788557)
chr2 (181-244)||(33321422-33321485)
chr2 (179-263)||(2790070-2790155)
chr2 (204-280)||(735991-736067)
chr2 (181-280)||(29774749-29774848)
chr2 (181-294)||(5903537-5903648)
chr2 (187-244)||(11072955-11073013)
chr2 (195-261)||(12442831-12442897)
chr2 (181-271)||(37409647-37409737)
chr2 (179-272)||(32522037-32522129)
chr2 (179-280)||(38471774-38471875)
chr2 (166-242)||(42839341-42839418)
chr2 (187-242)||(8832464-8832522)
chr2 (186-258)||(9140735-9140806)
chr2 (187-263)||(43787803-43787879)
chr2 (181-280)||(4004823-4004922)
chr2 (181-260)||(32366154-32366232)
chr2 (199-242)||(39592271-39592314)
chr2 (186-280)||(12683589-12683683)
chr2 (186-263)||(29133667-29133744)
chr2 (200-272)||(8342991-8343062)
chr2 (200-272)||(12267020-12267092)
chr2 (158-240)||(43796910-43796993)
chr2 (179-221)||(27703500-27703542)
chr2 (186-240)||(37419987-37420040)
chr2 (187-241)||(41554602-41554656)
chr2 (179-272)||(2401613-2401705)
chr2 (179-244)||(5516077-5516142)
chr2 (156-232)||(7028152-7028229)
chr2 (179-240)||(8441475-8441536)
chr2 (187-228)||(35731148-35731189)
chr2 (179-240)||(40301354-40301414)
chr2 (186-235)||(42382621-42382670)
chr2 (157-232)||(7041373-7041449)
chr2 (188-244)||(15155824-15155880)
chr2 (207-259)||(42064881-42064933)
chr2 (179-242)||(17531951-17532013)
chr2 (307-338)||(18276918-18276949)
chr2 (186-249)||(22422183-22422245)
chr2 (179-249)||(2757085-2757153)
chr2 (200-242)||(17546414-17546456)
chr2 (187-272)||(30995891-30995979)
chr2 (307-337)||(35997287-35997317)
chr2 (179-244)||(10574181-10574245)
chr2 (196-244)||(13097936-13097985)
chr2 (179-244)||(27881016-27881081)
chr2 (173-210)||(37419913-37419950)
chr2 (179-259)||(1837002-1837082)
chr2 (207-271)||(16108114-16108178)
chr2 (193-225)||(27243575-27243607)
[»] chr8 (52 HSPs)
chr8 (157-280)||(32975666-32975790)
chr8 (192-338)||(35168368-35168512)
chr8 (156-241)||(28879036-28879122)
chr8 (179-272)||(38895661-38895754)
chr8 (174-280)||(34286547-34286652)
chr8 (174-242)||(32213043-32213111)
chr8 (186-280)||(10298909-10299003)
chr8 (174-244)||(35453407-35453477)
chr8 (179-280)||(35285930-35286031)
chr8 (179-280)||(42363300-42363400)
chr8 (166-272)||(24350510-24350617)
chr8 (160-244)||(2669630-2669715)
chr8 (179-263)||(42102109-42102192)
chr8 (179-272)||(8216894-8216989)
chr8 (186-272)||(16972347-16972434)
chr8 (181-280)||(19327871-19327969)
chr8 (186-240)||(13265493-13265547)
chr8 (179-240)||(32131442-32131503)
chr8 (187-280)||(34102669-34102762)
chr8 (186-244)||(1089022-1089080)
chr8 (174-272)||(9131119-9131217)
chr8 (190-280)||(14942437-14942527)
chr8 (179-277)||(19925559-19925657)
chr8 (186-263)||(12607089-12607165)
chr8 (179-280)||(38338834-38338934)
chr8 (188-272)||(37410904-37410987)
chr8 (173-244)||(41145414-41145488)
chr8 (186-277)||(11988206-11988296)
chr8 (186-280)||(13131439-13131542)
chr8 (186-244)||(14709555-14709613)
chr8 (171-244)||(28280702-28280776)
chr8 (179-244)||(2289905-2289970)
chr8 (179-244)||(29243083-29243147)
chr8 (180-244)||(16706119-16706183)
chr8 (196-244)||(24087189-24087237)
chr8 (186-244)||(23412743-23412801)
chr8 (181-271)||(38195491-38195580)
chr8 (188-245)||(4326231-4326288)
chr8 (203-280)||(24866934-24867011)
chr8 (188-272)||(218245-218327)
chr8 (188-272)||(694805-694887)
chr8 (188-272)||(699014-699096)
chr8 (188-272)||(731868-731950)
chr8 (188-272)||(855764-855846)
chr8 (158-237)||(1184763-1184843)
chr8 (181-272)||(14262330-14262421)
chr8 (181-244)||(26046975-26047038)
chr8 (187-259)||(29218255-29218329)
chr8 (186-280)||(8752815-8752909)
chr8 (174-227)||(402124-402177)
chr8 (179-244)||(32924231-32924296)
chr8 (186-234)||(19925417-19925465)
[»] scaffold0157 (1 HSPs)
scaffold0157 (179-280)||(24747-24850)
[»] chr7 (64 HSPs)
chr7 (154-272)||(29378621-29378740)
chr7 (174-263)||(47511040-47511129)
chr7 (181-260)||(30181554-30181633)
chr7 (179-244)||(44613492-44613557)
chr7 (186-280)||(14691282-14691377)
chr7 (181-244)||(34922935-34922998)
chr7 (186-263)||(20888582-20888660)
chr7 (176-246)||(41037752-41037821)
chr7 (181-278)||(29390536-29390632)
chr7 (179-280)||(38372560-38372661)
chr7 (186-244)||(41094227-41094285)
chr7 (186-263)||(48021648-48021724)
chr7 (181-280)||(22032766-22032865)
chr7 (181-272)||(22575590-22575681)
chr7 (188-279)||(23356475-23356566)
chr7 (174-228)||(33288134-33288188)
chr7 (188-270)||(43391732-43391814)
chr7 (187-244)||(7098119-7098176)
chr7 (187-240)||(40629440-40629492)
chr7 (188-272)||(19308482-19308566)
chr7 (186-270)||(23119913-23119997)
chr7 (181-280)||(41677378-41677478)
chr7 (186-277)||(48895305-48895401)
chr7 (200-259)||(14536905-14536964)
chr7 (181-244)||(35809094-35809157)
chr7 (181-263)||(14675960-14676041)
chr7 (186-280)||(32917575-32917669)
chr7 (179-244)||(37779303-37779362)
chr7 (187-244)||(31613684-31613741)
chr7 (186-280)||(46743959-46744056)
chr7 (179-280)||(47654397-47654498)
chr7 (179-244)||(14593150-14593217)
chr7 (179-263)||(21027513-21027597)
chr7 (174-234)||(41094144-41094204)
chr7 (196-263)||(6406872-6406939)
chr7 (181-272)||(16958820-16958910)
chr7 (188-259)||(18855274-18855345)
chr7 (186-277)||(44799413-44799502)
chr7 (174-244)||(1054087-1054157)
chr7 (186-244)||(18837231-18837289)
chr7 (200-246)||(28759857-28759903)
chr7 (187-263)||(23137163-23137238)
chr7 (188-244)||(24414534-24414590)
chr7 (181-272)||(16932921-16933011)
chr7 (181-272)||(16938304-16938394)
chr7 (179-262)||(28004586-28004668)
chr7 (181-244)||(35246676-35246738)
chr7 (186-272)||(48949729-48949815)
chr7 (200-243)||(49104401-49104444)
chr7 (181-219)||(21249160-21249198)
chr7 (300-338)||(29778438-29778476)
chr7 (199-280)||(37465869-37465951)
chr7 (188-246)||(42083434-42083492)
chr7 (186-244)||(47648547-47648605)
chr7 (179-240)||(24371430-24371490)
chr7 (284-337)||(24414623-24414676)
chr7 (179-240)||(25536280-25536340)
chr7 (179-240)||(26331813-26331874)
chr7 (186-243)||(34927147-34927204)
chr7 (206-263)||(39279458-39279515)
chr7 (181-261)||(991504-991583)
chr7 (174-214)||(17944524-17944564)
chr7 (210-262)||(17944686-17944738)
chr7 (188-268)||(39803035-39803115)
[»] chr6 (55 HSPs)
chr6 (180-297)||(7267778-7267895)
chr6 (174-263)||(21025227-21025316)
chr6 (186-263)||(24625860-24625937)
chr6 (171-246)||(10054375-10054450)
chr6 (174-244)||(2034248-2034318)
chr6 (181-279)||(2255738-2255836)
chr6 (174-247)||(10755296-10755369)
chr6 (179-297)||(3210962-3211085)
chr6 (179-282)||(8014790-8014893)
chr6 (187-244)||(1240630-1240687)
chr6 (179-272)||(2027167-2027260)
chr6 (179-243)||(30533982-30534046)
chr6 (179-262)||(6776810-6776893)
chr6 (181-280)||(32675872-32675971)
chr6 (179-244)||(9894768-9894833)
chr6 (181-280)||(6758631-6758730)
chr6 (179-336)||(10873988-10874138)
chr6 (181-239)||(12817116-12817174)
chr6 (179-241)||(21891360-21891422)
chr6 (171-263)||(29052326-29052419)
chr6 (181-244)||(6632663-6632726)
chr6 (187-244)||(25430785-25430839)
chr6 (196-259)||(34509931-34509994)
chr6 (179-280)||(10687309-10687413)
chr6 (179-272)||(4808574-4808666)
chr6 (210-263)||(13429488-13429541)
chr6 (179-272)||(21610040-21610133)
chr6 (188-277)||(32165247-32165335)
chr6 (188-240)||(2040209-2040261)
chr6 (187-243)||(23239257-23239313)
chr6 (200-259)||(16589774-16589833)
chr6 (200-259)||(16605547-16605606)
chr6 (173-272)||(9202390-9202493)
chr6 (181-239)||(21871308-21871365)
chr6 (179-277)||(32615401-32615498)
chr6 (179-272)||(10184321-10184413)
chr6 (179-272)||(17914948-17915040)
chr6 (171-244)||(34801069-34801141)
chr6 (179-243)||(1468178-1468241)
chr6 (188-244)||(8011065-8011121)
chr6 (180-271)||(3829911-3830002)
chr6 (191-270)||(7446855-7446934)
chr6 (179-226)||(9201768-9201815)
chr6 (200-271)||(18078238-18078309)
chr6 (181-244)||(29623496-29623559)
chr6 (234-272)||(715902-715940)
chr6 (186-263)||(991282-991360)
chr6 (200-249)||(5958355-5958404)
chr6 (202-243)||(6958649-6958690)
chr6 (179-244)||(34413322-34413386)
chr6 (179-240)||(35111358-35111419)
chr6 (188-240)||(715948-716000)
chr6 (190-222)||(1172349-1172381)
chr6 (201-249)||(10730255-10730303)
chr6 (217-280)||(35071411-35071475)
[»] scaffold0024 (1 HSPs)
scaffold0024 (179-244)||(97225-97290)
[»] scaffold0012 (1 HSPs)
scaffold0012 (181-272)||(178504-178596)
[»] scaffold0332 (2 HSPs)
scaffold0332 (174-280)||(14729-14835)
scaffold0332 (171-263)||(14853-14946)
[»] scaffold0041 (2 HSPs)
scaffold0041 (186-244)||(109011-109069)
scaffold0041 (174-234)||(109092-109152)
[»] scaffold0512 (1 HSPs)
scaffold0512 (188-247)||(4076-4135)
[»] scaffold0048 (1 HSPs)
scaffold0048 (188-263)||(58868-58943)
[»] scaffold0057 (2 HSPs)
scaffold0057 (186-244)||(43835-43893)
scaffold0057 (179-234)||(24418-24472)
[»] scaffold1367 (1 HSPs)
scaffold1367 (181-262)||(1062-1143)
[»] scaffold0299 (1 HSPs)
scaffold0299 (181-261)||(11302-11382)
[»] scaffold0027 (1 HSPs)
scaffold0027 (171-244)||(142333-142406)
[»] scaffold0004 (2 HSPs)
scaffold0004 (160-244)||(227688-227773)
scaffold0004 (186-277)||(242626-242716)
[»] scaffold0022 (1 HSPs)
scaffold0022 (174-234)||(89282-89342)
[»] scaffold0071 (1 HSPs)
scaffold0071 (203-244)||(18148-18189)
[»] scaffold0006 (1 HSPs)
scaffold0006 (181-277)||(278978-279073)


Alignment Details
Target: chr3 (Bit Score: 381; Significance: 0; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 381; E-Value: 0
Query Start/End: Original strand, 1 - 397
Target Start/End: Complemental strand, 52421403 - 52421007
Alignment:
Q  1 tacctgaactttgacagcattcgagagacagggccgcattgttctgttacccaactcgtctaccaagcaaacacactggtagaaagccaagttaatatga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52421403 tacctgaactttgacagcattcgagagacagggccgcattgttctgttacccaactcgtctaccaagcaaacacactggtagaaagccaagttaatatga 52421304  T
Q  101 aaataaaaaagtatttggtatttgtagaagttattagtcacaatgatatataagacccgtttgtattggtttattttaagcttacgcaaataaataagct 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  52421303 aaataaaaaagtatttggtatttgtagaagttattagtcacaatgatatataagacccgtttgtattggcttattttaagcttacgcaaataaataagct 52421204  T
Q  201 tttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaactgagaacttatgaattaaaga 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  52421203 tttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatttttgttagcgagaactgagaacttatgaattaaaga 52421104  T
Q  301 aaattaatttatttgcataagctcaaaaataagtcaatacaatcagcctatagtttgtttgaattgacacatttgagcttatctacggacgtaagtg 397  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52421103 aaatttatttatttgcataagctcaaaaataagttaatacaatcagcctatagtttgtttgaattgacacatttgagcttatctacggacgtaagtg 52421007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 181 - 280
Target Start/End: Complemental strand, 34707795 - 34707696
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    |||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||| ||||||||||| || |||||||||||||    
T  34707795 cttacgtaaatatataagcttttatgtattattcataagcttgttaaggtagtttatgaaaaaacagctaacgaagatacaattttcgttagcgagaact 34707696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 174 - 263
Target Start/End: Complemental strand, 43080023 - 43079934
Alignment:
Q  174 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    |||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || | |||||||||||||    
T  43080023 tttttagcttatgcaaataaataagcttttatgtgttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaat 43079934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 10667402 - 10667493
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 272  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| || | || ||||||||| ||  ||||||||    
T  10667402 cttacgcaaataaataagcttatatgtattattcataagcttgtcaatgtagtttatgaaacaacattttatgaagatataacttttgttag 10667493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 174 - 277
Target Start/End: Complemental strand, 40240666 - 40240563
Alignment:
Q  174 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagc 273  Q
    |||| |||||| ||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||| |  | ||||||||||||| || |||||     
T  40240666 tttttagcttatgcaaataaagaagcttttatgtattattcataagcgtgtctaggtagtttatgaaaaaacaacttatgaagatacaattttcgttagt 40240567  T
Q  274 gaga 277  Q
    ||||    
T  40240566 gaga 40240563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 181 - 244
Target Start/End: Complemental strand, 40581159 - 40581096
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  40581159 cttatgcaaataaataagcttttatgtattattaataagcttgtcaaggtagtttatgaaaaaa 40581096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 174 - 280
Target Start/End: Original strand, 52021243 - 52021350
Alignment:
Q  174 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatg-aaaaaatagttaatgaagatacaatctttgttag 272  Q
    |||| |||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||| || | ||||||||| ||| || |||||    
T  52021243 tttttagcttatgcaaataaatatgcttttatgtattattcataagattgtcaaggtagtttatgaaaaaaacagcttatgaagatataattttcgttag 52021342  T
Q  273 cgagaact 280  Q
     |||||||    
T  52021343 tgagaact 52021350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 189 - 280
Target Start/End: Complemental strand, 53218114 - 53218023
Alignment:
Q  189 aataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |  |  |||||||||||| || ||||| |||||||    
T  53218114 aataaataagattttatgtattattcataagcttgtcaaggtagtttatgaaaaaacaacttttgaagatacaattttcgttagtgagaact 53218023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 179 - 263
Target Start/End: Complemental strand, 22809278 - 22809193
Alignment:
Q  179 agcttacgcaaataaataagctttt-atgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    |||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||  | | |||||||||||||    
T  22809278 agcttatgcaaataaataagctttttatatattattcataagcttgtcaaggtagtttatgaaaaaactgcttatgaagatacaat 22809193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 179 - 263
Target Start/End: Complemental strand, 2086775 - 2086691
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    |||||| | |||||||||| ||||||||||||||| |||| ||||| ||||| |||||||||||||||||| |||||||||||||    
T  2086775 agcttatgtaaataaataaacttttatgtattatttataatcttgtaaaggtggtttatgaaaaaatagtttatgaagatacaat 2086691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 186 - 272
Target Start/End: Original strand, 10521163 - 10521249
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 272  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| || | || ||||||||| ||  ||||||||    
T  10521163 gcaaataaataagcttatatgtattattcataagcttgtcaatgtagtttatgaaacaacattttatgaagatataacttttgttag 10521249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 189 - 263
Target Start/End: Original strand, 29270373 - 29270447
Alignment:
Q  189 aataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    |||||||||||||||||||||||||||||||||| ||||| || |||||||||||| || | |||||||||||||    
T  29270373 aataaataagcttttatgtattattcataagcttttcaagataatttatgaaaaaacagcttatgaagatacaat 29270447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 3870310 - 3870245
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||| ||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  3870310 agcttatgcaaaaaaataagcttttatgttttgttcataagcttgtcaaggtagtttatgaaaaaa 3870245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 182 - 261
Target Start/End: Original strand, 3845860 - 3845939
Alignment:
Q  182 ttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagataca 261  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||| ||   |||||||||||    
T  3845860 ttacacaaataaataagcttttatatattattcataagcttgtcaagctagtttatgacaaaacagcatatgaagataca 3845939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 186 - 280
Target Start/End: Complemental strand, 42956256 - 42956162
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    ||||||||||||| ||||||||||||||||||| |||||| | ||||||||||| |||| || | || |||||||||| || ||||| |||||||    
T  42956256 gcaaataaataagtttttatgtattattcataaacttgtcgaagtagtttatgataaaacagcttataaagatacaattttcgttagtgagaact 42956162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 155 - 263
Target Start/End: Complemental strand, 45331404 - 45331295
Alignment:
Q  155 acccgtttgtattggtttatttta-agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatg 253  Q
    ||||||||| ||||| |||||||  |||||| | |||||||||| |||||||||||||| ||||||||||| |||  |||||||||||||| |  | |||    
T  45331404 acccgtttggattggcttattttttagcttatgtaaataaataaccttttatgtattatgcataagcttgttaagacagtttatgaaaaaacatcttatg 45331305  T
Q  254 aagatacaat 263  Q
    ||||||||||    
T  45331304 aagatacaat 45331295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 179 - 244
Target Start/End: Original strand, 51409395 - 51409460
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||| |||||||||||| ||||||| |||||||||| || ||||||||||||||||||||||||    
T  51409395 agcttatgcaaataaataatcttttatttattattcatgagtttgtcaaggtagtttatgaaaaaa 51409460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 181 - 256
Target Start/End: Original strand, 10448778 - 10448853
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaag 256  Q
    |||| ||||||||||| || ||||||||||||| |||||||||| || |||||||||||||||| |||| ||||||    
T  10448778 cttatgcaaataaatatgcctttatgtattatttataagcttgttaatgtagtttatgaaaaaacagtttatgaag 10448853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 186 - 272
Target Start/End: Original strand, 585029 - 585115
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 272  Q
    ||||||||||||||||||||| |||||||| |||||| |  |||||||||||||||||| |  | ||||||||||||| || |||||    
T  585029 gcaaataaataagcttttatgcattattcaaaagcttcttgaggtagtttatgaaaaaacaacttatgaagatacaattttcgttag 585115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 179 - 277
Target Start/End: Original strand, 3645305 - 3645402
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 277  Q
    |||||| | ||||||||||| |||||||||||||| ||||  || | ||||||||||||||||||| |||| ||||||||||||| || ||||| ||||    
T  3645305 agcttatgtaaataaataagtttttatgtattatttataatttttt-aaggtagtttatgaaaaaacagttcatgaagatacaattttcgttagtgaga 3645402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 5129892 - 5129834
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||| ||||||||||||    
T  5129892 gcaaataaataagttttaatgtattattcataagcttgtcaatgtactttatgaaaaaa 5129834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 181 - 259
Target Start/End: Original strand, 7292684 - 7292762
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagata 259  Q
    |||| ||||||| ||||||| |||||||||||||||||| |||||||  ||||||||||||||| |||| |||| ||||    
T  7292684 cttatgcaaatacataagctcttatgtattattcataagtttgtcaatatagtttatgaaaaaacagtttatgatgata 7292762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 179 - 277
Target Start/End: Original strand, 29614196 - 29614293
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 277  Q
    |||||| | ||||||||||| |||||||||||||| ||||  || | ||||||||||||||||||| |||| ||||||||||||| || ||||| ||||    
T  29614196 agcttatgtaaataaataagtttttatgtattatttataatttttt-aaggtagtttatgaaaaaacagtttatgaagatacaattttcgttagtgaga 29614293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 186 - 247
Target Start/End: Original strand, 21296775 - 21296836
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatag 247  Q
    ||||||||||||| |||||| ||||||||||| | || ||||||||||||||||||||||||    
T  21296775 gcaaataaataagtttttatctattattcatacgtttatcaaggtagtttatgaaaaaatag 21296836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 193 - 262
Target Start/End: Complemental strand, 23816240 - 23816172
Alignment:
Q  193 aataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaa 262  Q
    ||||||||||||| |||||||||||||||  ||||||||||||||||||||| || | ||||||||||||    
T  23816240 aataagcttttat-tattattcataagctattcaaggtagtttatgaaaaaacagcttatgaagatacaa 23816172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 179 - 280
Target Start/End: Complemental strand, 28741298 - 28741197
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaa 278  Q
    |||||| |||||||||||  | ||||||||||| | |||||||||| || |||||||||||||||| || | |||||| |||||| || ||||| |||||    
T  28741298 agcttatgcaaataaatattcctttatgtattacttataagcttgttaaagtagtttatgaaaaaacagattatgaaggtacaattttcgttagtgagaa 28741199  T
Q  279 ct 280  Q
    ||    
T  28741198 ct 28741197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 259
Target Start/End: Complemental strand, 32900812 - 32900732
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagata 259  Q
    |||||| |||| || |||||||||||| |||||||||||| ||||| |||||||||| ||||||||||  | |||||||||    
T  32900812 agcttatgcaattatataagcttttatttattattcataaacttgttaaggtagtttgtgaaaaaataacttatgaagata 32900732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 188 - 278
Target Start/End: Original strand, 36182514 - 36182605
Alignment:
Q  188 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa-tagttaatgaagatacaatctttgttagcgagaa 278  Q
    ||||||||||| |||||| |||||||||||||||| || | ||||| |||||||||| ||| | ||||| ||| ||| ||||||||||||||    
T  36182514 aaataaataagtttttatttattattcataagcttttcgaagtagtatatgaaaaaactagcttatgaatatataatttttgttagcgagaa 36182605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 182 - 280
Target Start/End: Complemental strand, 43971928 - 43971830
Alignment:
Q  182 ttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    ||||| |||||||||||||||||| ||||||||| ||| |||| ||  |||||||||| |||| | || ||||||||| ||| || ||||| |||||||    
T  43971928 ttacgtaaataaataagcttttatttattattcacaagtttgttaaaatagtttatgagaaaacaatttatgaagataaaattttcgttagtgagaact 43971830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 3876347 - 3876282
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||| | |||||||| ||||||||| |||||||||||| || || |||||||||||||||||||    
T  3876347 agcttatgtaaataaattagcttttatttattattcataatctagttaaggtagtttatgaaaaaa 3876282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 263
Target Start/End: Complemental strand, 4257383 - 4257300
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatg--aaaaaatagttaatgaagatacaat 263  Q
    |||| ||||||||||||| |||||||||||||| ||||| || | |||||||||||||  |||||| |||| |||||||||||||    
T  4257383 cttatgcaaataaataagtttttatgtattatttataag-tttttaaggtagtttatgaaaaaaaacagtttatgaagatacaat 4257300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 262
Target Start/End: Original strand, 10272131 - 10272205
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaa 262  Q
    |||||||||||| |||||||||||||||||||||||  |||||| ||||| |||||||| || | |||| |||||||    
T  10272131 gcaaataaataaacttttatgtattattcataagct--tcaaggcagtttctgaaaaaacagcttatgaggatacaa 10272205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 261
Target Start/End: Original strand, 37243493 - 37243550
Alignment:
Q  204 atgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagataca 261  Q
    |||||||||| |||||||||| || ||||||||||||||||||||| |||||| ||||    
T  37243493 atgtattatttataagcttgttaacgtagtttatgaaaaaatagtttatgaaggtaca 37243550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 263
Target Start/End: Complemental strand, 47403839 - 47403762
Alignment:
Q  187 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatg-aaaaaatagttaatgaagatacaat 263  Q
    |||||||||||| ||||| |||||||||||||  |||| || |||||||||| |||||||| || |||||||||||||    
T  47403839 caaataaataagtttttaggtattattcataaatttgtaaatgtagtttatgcaaaaaataatttatgaagatacaat 47403762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 280
Target Start/End: Complemental strand, 48597975 - 48597850
Alignment:
Q  156 cccgtttgtattggtttatttta-agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatga 254  Q
    |||||||| ||||| |||||||  ||| || ||||||| |||| |||||||  |||||||||||| ||||| ||||||| |||||||||| |  | ||||    
T  48597975 cccgtttggattggcttattttttagcctatgcaaatacataaacttttataaattattcataagtttgtcgaggtagtgtatgaaaaaacaacttatga 48597876  T
Q  255 agatacaatctttgttagcgagaact 280  Q
    ||||||||| || || || |||||||    
T  48597875 agatacaattttcgtcagtgagaact 48597850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 207 - 271
Target Start/End: Complemental strand, 20365491 - 20365427
Alignment:
Q  207 tattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgtta 271  Q
    ||||||||||||||||||||| ||| |||||||||||  |||| ||||||||| ||| |||||||    
T  20365491 tattattcataagcttgtcaaagtactttatgaaaaagcagtttatgaagatataatttttgtta 20365427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 188 - 272
Target Start/End: Complemental strand, 37456508 - 37456425
Alignment:
Q  188 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 272  Q
    ||||||||||  |||||||||||||| ||||| || | ||| ||||||||||||||||| || || |||||||||| ||||||||    
T  37456508 aaataaataaatttttatgtattatttataagttttt-aagatagtttatgaaaaaataatttataaagatacaatttttgttag 37456425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 179 - 270
Target Start/End: Original strand, 4974313 - 4974404
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgtt 270  Q
    |||||| ||||||||||||||  | |||||||||| |||| ||||  ||||||||||||||||||| |  | ||||| ||||||| ||||||    
T  4974313 agcttatgcaaataaataagcactaatgtattatttataaacttgctaaggtagtttatgaaaaaacaagttatgaatatacaatatttgtt 4974404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 277
Target Start/End: Original strand, 20894505 - 20894602
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 277  Q
    |||||| | ||||||||||| |||||||||||||| ||||  || | || ||||||| |||||||| |||| ||||||||||||| || ||||| ||||    
T  20894505 agcttatgtaaataaataagtttttatgtattatttataatttttt-aatgtagtttttgaaaaaacagttcatgaagatacaattttcgttagtgaga 20894602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 30199048 - 30198982
Alignment:
Q  171 ttattttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttat 237  Q
    |||||||||| ||| ||||||||||||| |||||||| ||||||||||| | || || |||||||||    
T  30199048 ttattttaagtttatgcaaataaataagtttttatgtgttattcataagttagtaaatgtagtttat 30198982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 30473220 - 30473162
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||||||||| | || |||||||||| ||||| |||| |||||||||||||||||||    
T  30473220 gcaaataaataaacattaatgtattatttataaggttgttaaggtagtttatgaaaaaa 30473162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 280
Target Start/End: Original strand, 37778182 - 37778236
Alignment:
Q  226 aaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    |||||||||||||||||||| | | ||||||||||||| |||||||| |||||||    
T  37778182 aaggtagtttatgaaaaaatcggttatgaagatacaatttttgttagtgagaact 37778236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 11528905 - 11528958
Alignment:
Q  191 taaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    ||||||||||||||||||||||||||||  |||| || ||||||||||| ||||    
T  11528905 taaataagcttttatgtattattcataaatttgttaatgtagtttatgataaaa 11528958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 29002726 - 29002779
Alignment:
Q  189 aataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    ||||||||| |||||  |||||||||||||||||||||| ||| ||||||||||||    
T  29002726 aataaataaactttt--gtattattcataagcttgtcaaagtaatttatgaaaaaa 29002779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 242
Target Start/End: Original strand, 36266253 - 36266309
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaa 242  Q
    |||||||||||| ||||||||||||||| ||||| |||| |||||| |||| |||||    
T  36266253 gcaaataaataaacttttatgtattatttataagtttgttaaggtattttacgaaaa 36266309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 242
Target Start/End: Complemental strand, 41601408 - 41601352
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaa 242  Q
    |||||||||| || ||||||||||||||| |||| |||| ||| |||||||||||||    
T  41601408 gcaaataaatcagtttttatgtattattcttaagtttgttaagttagtttatgaaaa 41601352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 342
Target Start/End: Original strand, 23555532 - 23555567
Alignment:
Q  307 atttatttgcataagctcaaaaataagtcaatacaa 342  Q
    ||||||||||||||||||||||||||| ||||||||    
T  23555532 atttatttgcataagctcaaaaataagccaatacaa 23555567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 243
Target Start/End: Complemental strand, 24842189 - 24842126
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtc-aaggtagtttatgaaaaa 243  Q
    |||| ||||||||||||  |||||||||||||||||||| ||||| || ||| |||||||||||    
T  24842189 cttatgcaaataaataaatttttatgtattattcataagtttgtcaaatgtaatttatgaaaaa 24842126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 25341291 - 25341348
Alignment:
Q  186 gcaaataaataagcttttatgtattatt---cataagcttgtcaaggtagtttatgaa 240  Q
    ||||||||||||||||| || |||||||   ||||||||||| |||||||||||||||    
T  25341291 gcaaataaataagctttcatttattattactcataagcttgttaaggtagtttatgaa 25341348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 168 - 207
Target Start/End: Complemental strand, 27769801 - 27769762
Alignment:
Q  168 ggtttattttaagcttacgcaaataaataagcttttatgt 207  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  27769801 ggtttattttgagcttatgcaaataaataagcttttatgt 27769762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 37601120 - 37601053
Alignment:
Q  171 ttatttta-agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttat 237  Q
    |||||||| |||||| |||||||||||| | || |||||||||| |||||||||| ||| ||||||||    
T  37601120 ttattttagagcttatgcaaataaataaacgttaatgtattatttataagcttgttaagatagtttat 37601053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 186 - 245
Target Start/End: Original strand, 38524097 - 38524156
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaat 245  Q
    |||||||||||||  || |||||||||| ||||  |||| ||||||||||||||||||||    
T  38524097 gcaaataaataagtattaatgtattatttataaatttgttaaggtagtttatgaaaaaat 38524156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 187 - 246
Target Start/End: Original strand, 51662814 - 51662873
Alignment:
Q  187 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaata 246  Q
    |||||| |||| | || |||||||||| |||||||||| ||| |||||||||||||||||    
T  51662814 caaatagataaacattaatgtattatttataagcttgttaagatagtttatgaaaaaata 51662873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 243
Target Start/End: Original strand, 27769650 - 27769711
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaa 243  Q
    |||| |||||||||| | ||||| | ||||||| ||||||||||||| |||||||||||||||    
T  27769650 cttatgcaaataaatgaactttt-tatattatttataagcttgtcaatgtagtttatgaaaaa 27769711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 29830847 - 29830793
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 240  Q
    ||||||||||||| |||||||||||||  ||| | |||| |||||||||||||||    
T  29830847 gcaaataaataagtttttatgtattatctatatgtttgttaaggtagtttatgaa 29830793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 187 - 249
Target Start/End: Original strand, 54547812 - 54547873
Alignment:
Q  187 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagtt 249  Q
    |||||||||||||||| |||||||||||||||  || |||| |||||||||||| | ||||||    
T  54547812 caaataaataagcttt-atgtattattcataattttatcaatgtagtttatgaacatatagtt 54547873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 280
Target Start/End: Complemental strand, 1516173 - 1516081
Alignment:
Q  187 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    ||||||||||| | ||||||||||||| ||||| |||| |||||| |||||| ||||  |||| || |||||||||| ||  |||| |||||||    
T  1516173 caaataaataa-catttatgtattatttataagtttgttaaggtattttatggaaaatcagtttataaagatacaattttcattagtgagaact 1516081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 244
Target Start/End: Original strand, 15444002 - 15444043
Alignment:
Q  203 tatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    ||||||||||||| |||||||| |||||||||| ||||||||    
T  15444002 tatgtattattcacaagcttgtaaaggtagtttctgaaaaaa 15444043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 385
Target Start/End: Complemental strand, 20685770 - 20685697
Alignment:
Q  312 tttgcataagctcaaaaataagtcaatacaatcagcctatagtttgtttgaattgacacatttgagcttatcta 385  Q
    |||||||||||||||||||||| ||||||||   ||||  ||||||||||  |||||  ||||||| |||||||    
T  20685770 tttgcataagctcaaaaataagccaatacaagtggccttaagtttgtttggcttgacttatttgagtttatcta 20685697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 243
Target Start/End: Complemental strand, 16687150 - 16687087
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaa 243  Q
    |||||||||||||||| || ||  | ||||||||||||||||||||| | ||||||||| |||||    
T  16687150 agcttacgcaaataaacaacctcat-tgtattattcataagcttgtctatgtagtttattaaaaa 16687087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 186 - 214
Target Start/End: Original strand, 23555493 - 23555521
Alignment:
Q  186 gcaaataaataagcttttatgtattattc 214  Q
    |||||||||||||||||||||||||||||    
T  23555493 gcaaataaataagcttttatgtattattc 23555521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 280
Target Start/End: Complemental strand, 32901223 - 32901131
Alignment:
Q  188 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    |||||||||||||||||| ||||||||| ||  |||| ||| |||||||| | |||| |  | ||||||||| ||| || ||||| |||||||    
T  32901223 aaataaataagcttttatttattattcacaaatttgttaagatagtttataagaaaacaacttatgaagataaaattttcgttagtgagaact 32901131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 50502014 - 50502058
Alignment:
Q  170 tttattttaagcttacgcaaataaataagcttttatgtattattc 214  Q
    |||||||| |||||| |||||| ||| ||||||||||||||||||    
T  50502014 tttattttgagcttatgcaaattaatcagcttttatgtattattc 50502058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 8e-37; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 171 - 280
Target Start/End: Complemental strand, 6337849 - 6337739
Alignment:
Q  171 ttatttta-agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgt 269  Q
    |||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||| |||||    
T  6337849 ttattttagagcttatgtaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgt 6337750  T
Q  270 tagcgagaact 280  Q
    |||||||||||    
T  6337749 tagcgagaact 6337739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 189 - 280
Target Start/End: Complemental strand, 15515421 - 15515330
Alignment:
Q  189 aataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||| || ||||| |||||||    
T  15515421 aataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaagagcttatgaagatacaattttcgttagtgagaact 15515330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 174 - 280
Target Start/End: Original strand, 48819296 - 48819402
Alignment:
Q  174 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagc 273  Q
    |||| |||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| || | ||||||||||| | ||||||||     
T  48819296 ttttgagcttatgcaaataaatgagctttaatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacattttttgttagt 48819395  T
Q  274 gagaact 280  Q
    |||||||    
T  48819396 gagaact 48819402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 156 - 280
Target Start/End: Original strand, 1005318 - 1005443
Alignment:
Q  156 cccgtttgtattggtttatttt-aagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa-tagttaatg 253  Q
    |||||||| ||||| ||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||| || || |||    
T  1005318 cccgtttgaattggcttatttttaagcttatgcaaataaataagcttttacgtattattcataagcttgtctaggtagttaatgaaaaaactactt-atg 1005416  T
Q  254 aagatacaatctttgttagcgagaact 280  Q
    |||||||||| |||| ||| |||||||    
T  1005417 aagatacaatttttgatagtgagaact 1005443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 186 - 280
Target Start/End: Original strand, 4068124 - 4068218
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  | |||||||||| || || ||||| |||||||    
T  4068124 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacaacttatgaagatactattttcgttagtgagaact 4068218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 174 - 272
Target Start/End: Complemental strand, 31378840 - 31378742
Alignment:
Q  174 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 272  Q
    ||||||||||| |||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||  ||| || |||||||||| ||||||||    
T  31378840 ttttaagcttatgcaaataaataagcttttatatattattaacaagcttgtcaaggtagtttatgaaaaaaacgtttataaagatacaatttttgttag 31378742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 159 - 263
Target Start/End: Complemental strand, 16889070 - 16888966
Alignment:
Q  159 gtttgtattggtttatt-ttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaaga 257  Q
    ||||| ||||| ||||| || ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || | |||||||    
T  16889070 gtttggattggcttattgtttagcttgcgcaaataaataagcttttatgtattattcataagcttgt-aaggtagtttatgaaaaaacagcttatgaaga 16888972  T
Q  258 tacaat 263  Q
    ||||||    
T  16888971 tacaat 16888966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 187 - 263
Target Start/End: Original strand, 26988158 - 26988234
Alignment:
Q  187 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || | |||||||||||||    
T  26988158 caaataaataagcttttatgtcttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaat 26988234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 186 - 280
Target Start/End: Complemental strand, 37329489 - 37329395
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| || | ||||||||||||| || ||| | |||||||    
T  37329489 gcaaataaatgagcttttatgtattattcataaacttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttggtgagaact 37329395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 174 - 263
Target Start/End: Complemental strand, 3069943 - 3069854
Alignment:
Q  174 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    |||| ||||||  ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||    
T  3069943 tttttagcttatacaaataagtaagctttaatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaat 3069854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 192 - 277
Target Start/End: Complemental strand, 41196781 - 41196696
Alignment:
Q  192 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 277  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||||| || | ||||||||||||| |||||||| ||||    
T  41196781 aaataagtttttatgtattattcataagcttgtcaatgtagtttatgaaaaaacagcttatgaagatacaatttttgttagtgaga 41196696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 181 - 280
Target Start/End: Original strand, 35590134 - 35590233
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    |||| ||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||| || | ||||||||||||| || || || |||||||    
T  35590134 cttatgcaaataaataagcttttatgtatagttcataagcttgtcaaggttgtttatgaaaaaacagcttatgaagatacaattttcgtcagtgagaact 35590233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 179 - 244
Target Start/End: Original strand, 18327526 - 18327591
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  18327526 agcttatgcaaataaataagcttttatgtattactcataagcttgtcaagatagtttatgaaaaaa 18327591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 179 - 278
Target Start/End: Original strand, 28690004 - 28690105
Alignment:
Q  179 agcttacgcaaataaata--agcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgag 276  Q
    |||||| |||||||||||  || |||||||||||||||||||| |||||||||||||||||||| ||| || | ||||||||||||| ||| |||| |||    
T  28690004 agcttatgcaaataaatataaggttttatgtattattcataagtttgtcaaggtagtttatgaacaaacagcttatgaagatacaatttttattagtgag 28690103  T
Q  277 aa 278  Q
    ||    
T  28690104 aa 28690105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 179 - 263
Target Start/End: Complemental strand, 5243487 - 5243404
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    |||||| ||||||||||||| |||| ||||||||| ||||| || | |||||||||||||||||||||||| |||||||||||||    
T  5243487 agcttatgcaaataaataagtttttgtgtattatttataagttttt-aaggtagtttatgaaaaaatagtttatgaagatacaat 5243404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 179 - 263
Target Start/End: Original strand, 15791386 - 15791469
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    |||||| | ||||||||||| |||||||||||||| ||||| || | |||||||||||||||||||| |||||||||||||||||    
T  15791386 agcttatgtaaataaataagtttttatgtattatttataagttttt-aaggtagtttatgaaaaaatcgttaatgaagatacaat 15791469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 186 - 262
Target Start/End: Original strand, 37712077 - 37712152
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaa 262  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |  | ||||||||||||    
T  37712077 gcaaatgaataagcttttatgtat-attcataagcttgtcaaggtagtttatgaaaaaacaacttatgaagatacaa 37712152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 186 - 280
Target Start/End: Complemental strand, 9572862 - 9572767
Alignment:
Q  186 gcaaataaataagctttt-atgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    |||||||||||||||||| || ||||||||||||| |||| ||||||||||||||||||| | || ||||||||| | | |||||||| |||||||    
T  9572862 gcaaataaataagctttttatttattattcataagtttgttaaggtagtttatgaaaaaacaatttatgaagataaagtttttgttagtgagaact 9572767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 174 - 272
Target Start/End: Original strand, 45267462 - 45267561
Alignment:
Q  174 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatg-aaaaaatagttaatgaagatacaatctttgttag 272  Q
    |||| |||||| ||||||||||||||||||  |||||||| || ||||||||||||||||||||| |||||| || | ||||||||||||| || |||||    
T  45267462 ttttgagcttatgcaaataaataagctttttagtattatttattagcttgtcaaggtagtttatgaaaaaaacagcttatgaagatacaattttcgttag 45267561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 188 - 263
Target Start/End: Complemental strand, 46501076 - 46501001
Alignment:
Q  188 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    |||||||| ||||||| ||||||||| ||||||||||||  ||||||||||||||||||| | |||||||||||||    
T  46501076 aaataaatgagcttttttgtattatttataagcttgtcattgtagtttatgaaaaaataggttatgaagatacaat 46501001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 10850148 - 10850090
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||    
T  10850148 gcaaataaataagcttttatgtattattcataaggttgtcaacgtagtttatggaaaaa 10850090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 13038956 - 13039014
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||    
T  13038956 gcaaataaataagcttttatatattattcatgagcttgttaaggtagtttatgaaaaaa 13039014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 178 - 280
Target Start/End: Complemental strand, 22593492 - 22593390
Alignment:
Q  178 aagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 277  Q
    ||||||| ||||||||||||  ||||||||||||||||||||||||| || | |||||| ||||||  | || || |||||||||| |||||||| ||||    
T  22593492 aagcttatgcaaataaataaatttttatgtattattcataagcttgtaaatgcagtttacgaaaaatcactttataaagatacaatttttgttagtgaga 22593393  T
Q  278 act 280  Q
    |||    
T  22593392 act 22593390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 179 - 277
Target Start/End: Complemental strand, 32497355 - 32497258
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 277  Q
    |||||| ||||||||||||| |||||||||||||| ||||| || | ||||||||||||||||||| |||| |||| |||||||| || ||||| ||||    
T  32497355 agcttatgcaaataaataagtttttatgtattatttataag-tttttaaggtagtttatgaaaaaacagtttatgaggatacaattttcgttagtgaga 32497258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 1565466 - 1565401
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||| | ||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  1565466 agcttatgtaaataaacaagcttttatgcattattcgtaagcttgtcaaggtagtttatgaaaaaa 1565401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 179 - 240
Target Start/End: Complemental strand, 36423065 - 36423004
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 240  Q
    |||||| |||||||||||||||||||| ||||||||||||| |||| |||||||||||||||    
T  36423065 agcttatgcaaataaataagcttttatttattattcataagtttgttaaggtagtttatgaa 36423004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 188 - 263
Target Start/End: Complemental strand, 26946180 - 26946104
Alignment:
Q  188 aaataaataagctttt-atgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    |||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||| |  | |||||||||||||    
T  26946180 aaataaataagctttttatgtgttattcataagcttgttaaggtagtttatgaaaaaacaacttatgaagatacaat 26946104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 10082254 - 10082317
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||| ||||||||||||| |||||||| ||||| ||||| ||||||||||||||||||||||||    
T  10082254 cttatgcaaataaataagtttttatgtgttattgataagtttgtcaaggtagtttatgaaaaaa 10082317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 179 - 246
Target Start/End: Original strand, 28122618 - 28122685
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaata 246  Q
    |||||| |||||||||| ||||||||| |||||||||| ||||| | |||||||||||||||||||||    
T  28122618 agcttatgcaaataaattagcttttatttattattcatgagcttcttaaggtagtttatgaaaaaata 28122685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 187 - 277
Target Start/End: Complemental strand, 17628500 - 17628411
Alignment:
Q  187 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 277  Q
    |||||||||||| |||||||||||||| ||||| || | |||||||||||||||||||  ||| ||||||||||||| || ||||| ||||    
T  17628500 caaataaataagtttttatgtattatttataagttttt-aaggtagtttatgaaaaaaccgtttatgaagatacaattttcgttagtgaga 17628411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 179 - 261
Target Start/End: Complemental strand, 26435258 - 26435177
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagataca 261  Q
    |||||| ||||||||||||| ||||||||||||||  |||| ||||||| ||||||||||||||||  ||| |||||||||||    
T  26435258 agcttatgcaaataaataag-ttttatgtattatttttaagtttgtcaaagtagtttatgaaaaaactgtttatgaagataca 26435177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 39941450 - 39941508
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||||||| | |||||||||||||||||||||||||||||  |||||||||||||||    
T  39941450 gcaaataaatgaacttttatgtattattcataagcttgtcaaaatagtttatgaaaaaa 39941508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 191 - 261
Target Start/End: Original strand, 42591396 - 42591466
Alignment:
Q  191 taaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagataca 261  Q
    ||||||||||||||  ||||||| ||||| |||| |||||| ||||||||||||||||| |||||||||||    
T  42591396 taaataagcttttacatattatttataagtttgttaaggtattttatgaaaaaatagtttatgaagataca 42591466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 10365180 - 10365237
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaa 243  Q
    |||||| ||||| ||||||||||||||| ||||||||||||| |||||||||||||||    
T  10365180 gcaaatgaataaacttttatgtattattaataagcttgtcaaagtagtttatgaaaaa 10365237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 239
Target Start/End: Original strand, 26936856 - 26936920
Alignment:
Q  174 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatga 239  Q
    |||| |||||| |||||||||||||||| ||||||| | |||||||||||||||||||||||||||    
T  26936856 tttttagcttatgcaaataaataagcttctatgtat-actcataagcttgtcaaggtagtttatga 26936920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 181 - 297
Target Start/End: Original strand, 49971255 - 49971372
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgag-aac 279  Q
    |||| |||||||||||  | ||||| ||||||| |||||||||| || |||||||||||||||| || | | ||||||||||| || ||||| ||| |||    
T  49971255 cttatgcaaataaatattcctttatttattatttataagcttgttaatgtagtttatgaaaaaacagcttacgaagatacaattttcgttagtgagaaac 49971354  T
Q  280 tgagaacttatgaattaa 297  Q
    | | ||||||||||||||    
T  49971355 ttataacttatgaattaa 49971372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 51409799 - 51409730
Alignment:
Q  171 ttattttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 240  Q
    ||||||| |||||| ||||||||||||| || ||||||||||||||||| |||| || ||||||||||||    
T  51409799 ttattttgagcttatgcaaataaataagtttgtatgtattattcataagtttgtaaatgtagtttatgaa 51409730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 263
Target Start/End: Original strand, 20169266 - 20169350
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    |||||| |||||||||||||||||||||||||||| ||||| || | ||  ||||||||||||||| |||| || || |||||||    
T  20169266 agcttatgcaaataaataagcttttatgtattatttataagtttttaaatatagtttatgaaaaaacagtttataaatatacaat 20169350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 23544819 - 23544875
Alignment:
Q  205 tgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagataca 261  Q
    |||||||||||||||||||||||||||||||||||||||| || | ||||| |||||    
T  23544819 tgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaaaataca 23544875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 240
Target Start/End: Complemental strand, 35897705 - 35897646
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 240  Q
    |||| ||||||||||||| |||||| |||||||||||||||| |||| ||||||||||||    
T  35897705 cttatgcaaataaataagtttttatttattattcataagcttttcaaagtagtttatgaa 35897646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 243
Target Start/End: Original strand, 41003391 - 41003454
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtc-aaggtagtttatgaaaaa 243  Q
    |||| ||||||||||||| |||||||||||||| ||||| ||||| ||||||||||||||||||    
T  41003391 cttatgcaaataaataagtttttatgtattatttataagtttgtcaaaggtagtttatgaaaaa 41003454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 187 - 277
Target Start/End: Original strand, 15631914 - 15632004
Alignment:
Q  187 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 277  Q
    |||||||||||| |||||||||||||| ||||| |||| || ||| ||||||||||||  ||| ||||| ||||||| || ||||| ||||    
T  15631914 caaataaataagtttttatgtattatttataagtttgttaatgtattttatgaaaaaactgtttatgaaaatacaattttcgttagtgaga 15632004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 39941379 - 39941436
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||||||| || |||||||||||||||||||||||||||| |||| |||||||||||    
T  39941379 gcaaataaatgagtttttatgtattattcataagcttgtcaaagtag-ttatgaaaaaa 39941436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 39941519 - 39941577
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||||||| |  |||||||||||||||||||||||||||| |||||| |||||||||    
T  39941519 gcaaataaatgaatttttatgtattattcataagcttgtcaaagtagttaatgaaaaaa 39941577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 35282678 - 35282613
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||| |||||||||||||| ||||| ||||||| |||| | ||| |||||||||||||||||||    
T  35282678 agcttatgcaaataaataagcgtttatttattatttataaacatgttaaggtagtttatgaaaaaa 35282613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 37148177 - 37148112
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||| |||||||||||||| || |||||||||| |||||  ||| |||||||||||||||||||    
T  37148177 agcttatgcaaataaataagcattaatgtattatttataagtatgttaaggtagtttatgaaaaaa 37148112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 37157002 - 37156937
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||| |||||||||||||| || |||||||||| |||||  ||| |||||||||||||||||||    
T  37157002 agcttatgcaaataaataagcattaatgtattatttataagtatgttaaggtagtttatgaaaaaa 37156937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 244
Target Start/End: Original strand, 51162271 - 51162336
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||| |||||||||||||| || |||||||||| | ||| |||| |||||||||||||||||||    
T  51162271 agcttatgcaaataaataagcattaatgtattatttacaagtttgttaaggtagtttatgaaaaaa 51162336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 179 - 233
Target Start/End: Original strand, 391170 - 391225
Alignment:
Q  179 agcttacgcaaataaataagctttt-atgtattattcataagcttgtcaaggtagt 233  Q
    |||||| |||||||||||||||||| || ||||||||||||||||||||| |||||    
T  391170 agcttatgcaaataaataagctttttatatattattcataagcttgtcaatgtagt 391225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 194 - 241
Target Start/End: Complemental strand, 1265762 - 1265715
Alignment:
Q  194 ataagcttttatgtattattcataagcttgtcaaggtagtttatgaaa 241  Q
    ||||| |||||||||||||||||||  |||||||||||||||||||||    
T  1265762 ataagattttatgtattattcataattttgtcaaggtagtttatgaaa 1265715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 26542977 - 26543040
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||| ||||||||||| |||||||||||||||  ||||| |||| || ||||||||||||||||    
T  26542977 cttatgcaaataaatatgcttttatgtattatatataagtttgttaatgtagtttatgaaaaaa 26543040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 259
Target Start/End: Original strand, 47413385 - 47413454
Alignment:
Q  189 aataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagata 259  Q
    ||||||| ||||||| ||||||||| ||||||||||||| ||||||||||||| || || | |||||||||    
T  47413385 aataaatgagctttt-tgtattatttataagcttgtcaatgtagtttatgaaataacaggttatgaagata 47413454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 17814193 - 17814285
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 272  Q
    |||||| |||||||||||   |||||||||||||| ||||| || | |||||||||||||||||||| | | ||||| ||||||| || |||||    
T  17814193 agcttatgcaaataaatacatttttatgtattatttataagttttt-aaggtagtttatgaaaaaatgggttatgaaaatacaattttcgttag 17814285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 263
Target Start/End: Original strand, 41129991 - 41130080
Alignment:
Q  174 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    |||| |||||| | ||||||| ||| ||||||||||||||||||||||| || |||| |||||||  |||| |  | |||||||||||||    
T  41129991 tttttagcttatgtaaataaaaaagtttttatgtattattcataagcttctctaggtggtttatgtcaaaacaacttatgaagatacaat 41130080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 243
Target Start/End: Original strand, 1321545 - 1321608
Alignment:
Q  180 gcttacgcaaataaataagcttttatgtattattcataa-gcttgtcaaggtagtttatgaaaaa 243  Q
    ||||| ||||||||||||||||  ||||||||||||||| | ||||||||||||| |||||||||    
T  1321545 gcttatgcaaataaataagcttg-atgtattattcataaagtttgtcaaggtagtgtatgaaaaa 1321608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 256
Target Start/End: Original strand, 5610531 - 5610587
Alignment:
Q  200 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaag 256  Q
    |||||||||||||| |||||||| | || ||||||||| ||||||||||| ||||||    
T  5610531 ttttatgtattatttataagctttttaatgtagtttataaaaaaatagtttatgaag 5610587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 277
Target Start/End: Complemental strand, 13412534 - 13412439
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 277  Q
    |||| ||||||| ||||  |||||||||||||| ||||| || | |||||||||||||||||||   || ||||||||||||  |||||||| ||||    
T  13412534 cttatgcaaatacataaatttttatgtattatttataagttttt-aaggtagtttatgaaaaaaccattcatgaagatacaaattttgttagtgaga 13412439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 259
Target Start/End: Original strand, 25485750 - 25485830
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagata 259  Q
    |||||| ||||||||||||  |||||| | |||||||| | ||| | ||||||||||||||||||| | || |||||||||    
T  25485750 agcttatgcaaataaataaatttttatttgttattcatgaccttattaaggtagtttatgaaaaaacaatttatgaagata 25485830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 263
Target Start/End: Complemental strand, 39658379 - 39658323
Alignment:
Q  207 tattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    ||||||||||||||||| ||||||| |||||||||||| || | |||||| ||||||    
T  39658379 tattattcataagcttgccaaggtaatttatgaaaaaacagcttatgaaggtacaat 39658323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 244
Target Start/End: Original strand, 46473105 - 46473161
Alignment:
Q  188 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||||||||||||||| |||||||||| || || | |||||||| ||||||||||    
T  46473105 aaataaataagcttttatttattattcatgaggtttttaaggtagtatatgaaaaaa 46473161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 8410129 - 8410211
Alignment:
Q  158 cgtttgtattggtttatttta-agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 240  Q
    |||||| ||| | |||||||| ||| || ||||||||||||| |||||||||||||||||||| || | || ||||||||||||    
T  8410129 cgtttgaattagcttattttagagcctatgcaaataaataagtttttatgtattattcataag-tttttaaagtagtttatgaa 8410211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 203 - 242
Target Start/End: Complemental strand, 9177771 - 9177732
Alignment:
Q  203 tatgtattattcataagcttgtcaaggtagtttatgaaaa 242  Q
    ||||||||||||||||||||||||| ||||| ||||||||    
T  9177771 tatgtattattcataagcttgtcaacgtagtctatgaaaa 9177732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 188 - 272
Target Start/End: Original strand, 19284907 - 19284993
Alignment:
Q  188 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttat--gaaaaaatagttaatgaagatacaatctttgttag 272  Q
    ||||||||||||| |||||||||||| ||||| |||| ||| || |||||   |||||| |||| ||||||||||||| || |||||    
T  19284907 aaataaataagctattatgtattatttataagtttgttaagatattttataaaaaaaaacagtttatgaagatacaattttcgttag 19284993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 338
Target Start/End: Complemental strand, 45267483 - 45267452
Alignment:
Q  307 atttatttgcataagctcaaaaataagtcaat 338  Q
    ||||||||||||||||||||||||||||||||    
T  45267483 atttatttgcataagctcaaaaataagtcaat 45267452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 263
Target Start/End: Original strand, 5347159 - 5347240
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    |||| |||||||||||   |||||||||||||| ||||| || | |||||||||||||||||||| | | ||||| |||||||    
T  5347159 cttatgcaaataaatacatttttatgtattatttataagttttt-aaggtagtttatgaaaaaatgggttatgaaaatacaat 5347240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 272
Target Start/End: Complemental strand, 3116145 - 3116053
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 272  Q
    |||||| ||||||||||||  |||||||| || || ||||| || | |||||||||||||||||||   || ||||||||||||| || |||||    
T  3116145 agcttatgcaaataaataaatttttatgttttgtttataagttttt-aaggtagtttatgaaaaaaccatttatgaagatacaattttcgttag 3116053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 205
Target Start/End: Original strand, 36259225 - 36259262
Alignment:
Q  168 ggtttattttaagcttacgcaaataaataagcttttat 205  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  36259225 ggtttattttgagcttatgcaaataaataagcttttat 36259262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 263
Target Start/End: Original strand, 50919497 - 50919573
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    |||||||||| || |||| | ||||||| ||||| ||||||| ||||||||| |||||| || | |||||||||||||    
T  50919497 gcaaataaatgagttttt-tatattatttataagtttgtcaatgtagtttataaaaaaacaggttatgaagatacaat 50919573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 208 - 244
Target Start/End: Original strand, 18317032 - 18317068
Alignment:
Q  208 attattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||||||||| |||||||||||| |||||||||||    
T  18317032 attattcataagattgtcaaggtaggttatgaaaaaa 18317068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 244
Target Start/End: Original strand, 19220185 - 19220240
Alignment:
Q  188 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    ||||||||||| |||||||||||||| || || || | |||||||||||||||||||    
T  19220185 aaataaataagtttttatgtattatttat-aggtttttaaggtagtttatgaaaaaa 19220240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 222
Target Start/End: Original strand, 36178533 - 36178580
Alignment:
Q  174 ttttaagcttacgcaaataaataagcttttatgtattattcataagctt 222  Q
    |||| |||||| ||||||||||||||||||| |||||||| ||||||||    
T  36178533 ttttgagcttatgcaaataaataagctttta-gtattattgataagctt 36178580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 2e-31; HSPs: 81)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 174 - 279
Target Start/End: Original strand, 28625477 - 28625582
Alignment:
Q  174 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagc 273  Q
    |||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || | ||||||||||||| || |||||     
T  28625477 tttttagcttatgcaaataaataagcttttaagtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagt 28625576  T
Q  274 gagaac 279  Q
    ||||||    
T  28625577 gagaac 28625582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 181 - 280
Target Start/End: Complemental strand, 12987096 - 12986997
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| ||| || |||||||| |||||||    
T  12987096 cttatgcaaataaataagcttttatgtattgttcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagttaccatttttgttagtgagaact 12986997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 188 - 280
Target Start/End: Original strand, 6144749 - 6144841
Alignment:
Q  188 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    |||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||| | ||||| ||||||| ||||||||||||||||    
T  6144749 aaataaataagcttttatatattactcataagcttgtcaaggtattttatgaaaaaatagcttatgaatatacaatttttgttagcgagaact 6144841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 186 - 280
Target Start/End: Original strand, 12467273 - 12467368
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatg-aaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || | ||||||| ||||| |||||||| |||||||    
T  12467273 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaaacagcttatgaagagacaatttttgttagtgagaact 12467368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 156 - 335
Target Start/End: Original strand, 42706774 - 42706958
Alignment:
Q  156 cccgtttgtattggtttatttta-agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttat--gaaaaaatagttaat 252  Q
    |||||||| ||||| |||||||  |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||   |||||| || | ||    
T  42706774 cccgtttggattggcttatttttgagcttatgcaaataaataagcttttaagtattattcataagcttgtcaaggtagtttataaaaaaaaacagcttat 42706873  T
Q  253 gaagatacaatctttgttagcgagaactgagaacttatgaatta--aagaaaattaatttatttgcataagctcaaaaataagtc 335  Q
    ||||||||||| || || || || || ||| |||||||||||||  |  |||| | |||||||| |||||||||  |||||||||    
T  42706874 gaagatacaattttcgtcagtgaaaagtgaaaacttatgaattaacattaaaacttatttattttcataagctcgtaaataagtc 42706958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 186 - 263
Target Start/End: Original strand, 41534632 - 41534709
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || | |||||||||||||    
T  41534632 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttacgaaaaaacagcttatgaagatacaat 41534709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 181 - 280
Target Start/End: Complemental strand, 13060684 - 13060585
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || | |||||| ||| || || ||||| |||||||    
T  13060684 cttatgcaaataaataagcttttatgtattgttcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagttaccattttcgttagtgagaact 13060585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 181 - 263
Target Start/End: Original strand, 1473360 - 1473442
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| || | |||||||||||||    
T  1473360 cttatgcaaataaataagcttttatgtattattcataagcttgtcaagttaatttatgaaaaaacagcttatgaagatacaat 1473442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 189 - 280
Target Start/End: Complemental strand, 11912176 - 11912085
Alignment:
Q  189 aataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    |||||||||||||||||||||| ||||||| |||||||| ||||||| |||||||| || | ||||||||||||| |||||||| |||||||    
T  11912176 aataaataagcttttatgtattgttcataatcttgtcaaagtagtttgtgaaaaaagagcttatgaagatacaatttttgttagtgagaact 11912085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 158 - 280
Target Start/End: Complemental strand, 41059895 - 41059772
Alignment:
Q  158 cgtttgtattggttta-ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaag 256  Q
    |||||||||||| ||| |||| |||||| ||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||  |  | ||||||    
T  41059895 cgtttgtattggcttactttttagcttatgcaaacaaataagcttttatgtattattcataagcttatcaaggttgtttatgaaaaatcaccttatgaag 41059796  T
Q  257 atacaatctttgttagcgagaact 280  Q
    || |||| || ||||| |||||||    
T  41059795 attcaattttcgttagtgagaact 41059772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 189 - 279
Target Start/End: Original strand, 1868858 - 1868948
Alignment:
Q  189 aataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaac 279  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |  | ||||||||||||| || ||||| ||||||    
T  1868858 aataaataagcttttatgtattattcacaagcttgtcaaggtagtttatgaaaaatcaacttatgaagatacaattttcgttagtgagaac 1868948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 179 - 278
Target Start/End: Complemental strand, 22202020 - 22201917
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa----aaaatagttaatgaagatacaatctttgttagcg 274  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||    |||| || |  |||||||||||| || |||||||    
T  22202020 agcttatgtaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaggaaaaaaaagcttgtgaagatacaattttcgttagcg 22201921  T
Q  275 agaa 278  Q
    ||||    
T  22201920 agaa 22201917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 10537303 - 10537238
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  10537303 agcttatgcaaataaataagcttttatgtattatttataagcttgtcaagatagtttatgaaaaaa 10537238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 24030225 - 24030282
Alignment:
Q  187 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24030225 caaataaataagcttttatgtattattcataagcttgtcaaagtagtttatgaaaaaa 24030282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 42852032 - 42852089
Alignment:
Q  187 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  42852032 caaataaataagcttttatgtattattcataagcttgtcaagatagtttatgaaaaaa 42852089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 186 - 242
Target Start/End: Complemental strand, 29922266 - 29922210
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaa 242  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  29922266 gcaaataaataagtttttatgtattattcataagcttgtcaaggtagtttatgaaaa 29922210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 181 - 280
Target Start/End: Original strand, 17657246 - 17657345
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||| |  | |||||||||| || || ||||| |||||||    
T  17657246 cttatgcaaataaataagcttttatgtattattcataagcttgccattgtagtttatgaaaaaacatcttatgaagatacgattttcgttagtgagaact 17657345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 192 - 263
Target Start/End: Complemental strand, 31637165 - 31637094
Alignment:
Q  192 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| || || | |||||||||||||    
T  31637165 aaataagcttttatgtattattcataagcttgtcaaggtaatttatgaaagaacagcttatgaagatacaat 31637094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 179 - 280
Target Start/End: Complemental strand, 40452562 - 40452460
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatcttt-gttagcgaga 277  Q
    |||||| |||||  |||||||||||||| ||||||||||||||||||||||||||||||||| ||| || | ||||||||| ||| ||| ||||| ||||    
T  40452562 agcttatgcaaaggaataagcttttatgcattattcataagcttgtcaaggtagtttatgaagaaacagcttatgaagatataatttttcgttagtgaga 40452463  T
Q  278 act 280  Q
    |||    
T  40452462 act 40452460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 179 - 280
Target Start/End: Original strand, 1576633 - 1576733
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaa 278  Q
    |||||| |||||||||||| |||||||||||| |||||||||||||||| |||||||||| ||||| |  |  |||||||||||| |||||||| |||||    
T  1576633 agcttaagcaaataaataaacttttatgtatt-ttcataagcttgtcaatgtagtttatggaaaaacaacttgtgaagatacaatttttgttagtgagaa 1576731  T
Q  279 ct 280  Q
    ||    
T  1576732 ct 1576733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 179 - 280
Target Start/End: Complemental strand, 1608182 - 1608082
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaa 278  Q
    |||||| |||||||||||| |||||||||||| |||||||||||||||| |||||||||| ||||| |  |  |||||||||||| |||||||| |||||    
T  1608182 agcttaagcaaataaataaacttttatgtatt-ttcataagcttgtcaatgtagtttatggaaaaacaacttgtgaagatacaatttttgttagtgagaa 1608084  T
Q  279 ct 280  Q
    ||    
T  1608083 ct 1608082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 179 - 272
Target Start/End: Complemental strand, 2878760 - 2878668
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 272  Q
    |||||| |||||||||||||||||||| ||||||||||||| ||||||| || |||||||||| || |||| | ||||||||||| ||||||||    
T  2878760 agcttatgcaaataaataagcttttatctattattcataagtttgtcaatgtggtttatgaaacaacagttta-gaagatacaatttttgttag 2878668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 207 - 280
Target Start/End: Original strand, 41419531 - 41419604
Alignment:
Q  207 tattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    |||||||||||||||||||||||||||||||||||||| || | ||||||||||||| || ||||| |||||||    
T  41419531 tattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagtgagaact 41419604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 43268704 - 43268644
Alignment:
Q  180 gcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 240  Q
    ||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  43268704 gcttatgcaaataaataagcttttatgtattattaataagctggtcaaggtagtttatgaa 43268644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 1942990 - 1943073
Alignment:
Q  158 cgtttgtattggtttatttta-agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 240  Q
    |||||| ||||| |||||||  |||||| |||| |||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  1942990 cgtttggattggcttatttttgagcttatgcaagtaaataagtttttatgtattatccataagcttgtcaaggtagtttatgaa 1943073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 186 - 249
Target Start/End: Original strand, 3977484 - 3977547
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagtt 249  Q
    |||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||| ||||    
T  3977484 gcaaataaataaacttttgtgcattattcataagcttgtcaaggtagtttatgaaaaaacagtt 3977547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 179 - 242
Target Start/End: Original strand, 17128280 - 17128343
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaa 242  Q
    |||||| ||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||    
T  17128280 agcttatgcaaataaataagcttttatgtattattcataaacttatcaaagtagtttatgaaaa 17128343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 174 - 280
Target Start/End: Original strand, 35536839 - 35536948
Alignment:
Q  174 ttttaagcttacgcaaataaataagcttttatgtattattcat---aagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgtt 270  Q
    |||| |||||| ||||||| |||||||||||||| ||||||||   |||||||||||| ||||||||||||||| || | ||||||||||||| || |||    
T  35536839 tttttagcttatgcaaatacataagcttttatgtgttattcatcataagcttgtcaagatagtttatgaaaaaacagcttatgaagatacaattttcgtt 35536938  T
Q  271 agcgagaact 280  Q
    |  |||||||    
T  35536939 actgagaact 35536948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 186 - 280
Target Start/End: Complemental strand, 7364386 - 7364292
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    ||||| |||||||||| ||| |||||||||||||||||| |||||||||||| || ||| |  | ||||||||||||| |||||||| |||||||    
T  7364386 gcaaaaaaataagcttctatttattattcataagcttgttaaggtagtttatcaacaaacaacttatgaagatacaatatttgttagtgagaact 7364292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 174 - 240
Target Start/End: Original strand, 40696998 - 40697064
Alignment:
Q  174 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 240  Q
    |||| |||||| ||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||    
T  40696998 ttttgagcttatgcaaataaataagtttttatgtattatttataagcttgtcaaggtattttatgaa 40697064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 188 - 277
Target Start/End: Original strand, 11991316 - 11991404
Alignment:
Q  188 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 277  Q
    |||||||||||||||||||||||||| |||||||||| ||  | |||||||||||||||||| ||||| ||||||| || ||||| ||||    
T  11991316 aaataaataagcttttatgtattatttataagcttgtaaatatggtttatgaaaaaatagtt-atgaacatacaattttcgttagtgaga 11991404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 179 - 260
Target Start/End: Original strand, 33757090 - 33757170
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatac 260  Q
    |||||| ||||||||||||| |||||||||||||| ||||| || | ||| ||||||||||||||| |||||||||||||||    
T  33757090 agcttatgcaaataaataagtttttatgtattatttataag-tttttaagctagtttatgaaaaaacagttaatgaagatac 33757170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 188 - 277
Target Start/End: Complemental strand, 38461357 - 38461268
Alignment:
Q  188 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 277  Q
    |||||||||||| ||||||||||||| ||||| |||| || ||| |||||||||||| |||| ||||||||| ||| |||||||| ||||    
T  38461357 aaataaataagcctttatgtattatttataagtttgtaaatgtattttatgaaaaaacagtttatgaagatataatttttgttagtgaga 38461268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 186 - 277
Target Start/End: Original strand, 26003006 - 26003097
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 277  Q
    ||||||||||||| |||||||||||||| ||||| |||| ||| || ||||||||||| | ||| ||||||||||||| || ||||| ||||    
T  26003006 gcaaataaataagtttttatgtattatttataagtttgttaagttattttatgaaaaagtggtttatgaagatacaattttcgttagtgaga 26003097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 181 - 280
Target Start/End: Original strand, 43319007 - 43319106
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    |||| ||||||||||| |  ||||||||||||| |||||||||| || |||||||||||||||| |||| |||||| || ||| || ||||| |||||||    
T  43319007 cttatgcaaataaatatgtctttatgtattatttataagcttgttaatgtagtttatgaaaaaacagtttatgaaggtataattttcgttagtgagaact 43319106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 181 - 263
Target Start/End: Original strand, 15122549 - 15122630
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    |||| ||||| ||||||| |||||||||||||| ||||| || | ||||||||||||||||||| |||| |||||||||||||    
T  15122549 cttatgcaaagaaataagtttttatgtattatttataagttttt-aaggtagtttatgaaaaaacagtttatgaagatacaat 15122630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 178 - 280
Target Start/End: Original strand, 28357353 - 28357455
Alignment:
Q  178 aagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 277  Q
    ||||||| ||||||||||| || | ||||||||||| ||||| |||| || |||||||||||||||| |||| |||||| | |||| || ||||| ||||    
T  28357353 aagcttatgcaaataaatatgcctatatgtattatttataagtttgttaatgtagtttatgaaaaaacagtttatgaaggtccaattttcgttagtgaga 28357452  T
Q  278 act 280  Q
    |||    
T  28357453 act 28357455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 13625605 - 13625540
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||| ||||||||||| |||||||| ||||||||||||||||||  ||||||||||||| ||||    
T  13625605 agcttatgcaaataaatatgcttttatttattattcataagcttgttgaggtagtttatgataaaa 13625540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 186 - 242
Target Start/End: Original strand, 2670084 - 2670140
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaa 242  Q
    ||||||||| || |||||||||| |||||||||| ||||||||||||||||||||||    
T  2670084 gcaaataaacaatcttttatgtactattcataagtttgtcaaggtagtttatgaaaa 2670140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 188 - 267
Target Start/End: Original strand, 342001 - 342080
Alignment:
Q  188 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatcttt 267  Q
    ||||||||||| |||||||||||||| | ||| ||| |||||||||||||||||||  || | |||||||||||| ||||    
T  342001 aaataaataagtttttatgtattatttacaagtttgccaaggtagtttatgaaaaatcagcttatgaagatacaagcttt 342080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 242
Target Start/End: Complemental strand, 11163353 - 11163290
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaa 242  Q
    |||||| | |||| |||||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  11163353 agcttatgtaaatcaataagtttttatgtatgattcataagcttgtcgaggtagtttatgaaaa 11163290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 244
Target Start/End: Complemental strand, 36106821 - 36106758
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||||||||||||||| |||||||||| ||||||||  |||| |||||||||||||| ||||    
T  36106821 cttacgcaaataaataagtttttatgtatgattcataaatttgttaaggtagtttatgagaaaa 36106758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 186 - 237
Target Start/End: Complemental strand, 43266018 - 43265967
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttat 237  Q
    |||||||||||||||||||||||| |||||||||||||| ||| ||||||||    
T  43266018 gcaaataaataagcttttatgtatcattcataagcttgttaagatagtttat 43265967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 188 - 278
Target Start/End: Original strand, 6125298 - 6125387
Alignment:
Q  188 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaa 278  Q
    |||||||||| |||||||||||||||||||| ||| | || ||| |||||| |||||||| | ||||| ||||||| |||||||| |||||    
T  6125298 aaataaataaacttttatgtattattcataatcttataaatgtattttatg-aaaaatagcttatgaatatacaatatttgttagtgagaa 6125387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 181 - 263
Target Start/End: Complemental strand, 15709973 - 15709892
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    |||| ||||||||||||| |||| ||||||||| ||||| || | ||| |||||||||||||||| ||||||| |||||||||    
T  15709973 cttatgcaaataaataagtttttctgtattatttataagtttttaaag-tagtttatgaaaaaatcgttaatgtagatacaat 15709892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 17868261 - 17868195
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattc-ataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||| |||||||| ||||||||| |||||||||  |||||||||||||||||||||||| |||||    
T  17868261 agcttatgcaaataagtaagcttttgtgtattattttataagcttgtcaaggtagtttatggaaaaa 17868195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 171 - 280
Target Start/End: Original strand, 28357132 - 28357244
Alignment:
Q  171 ttattttaagcttacgcaaataaataagcttttat---gtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatcttt 267  Q
    ||||||| |||||| |||||||||| || |||| |   |||||||| | ||||||||||| |||||||||||||||| || | ||||||||||||| ||     
T  28357132 ttattttgagcttatgcaaataaatgagttttttttttgtattatttaaaagcttgtcaatgtagtttatgaaaaaacaggttatgaagatacaattttc 28357231  T
Q  268 gttagcgagaact 280  Q
    |||| ||| ||||    
T  28357232 gttaacgaaaact 28357244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 257
Target Start/End: Complemental strand, 3520577 - 3520509
Alignment:
Q  188 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaaga 257  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||| || |||| || | |||||||    
T  3520577 aaataaataacctttta-gtattattcataagcttgtcaaggtagtttaggacaaaacagcttatgaaga 3520509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 263
Target Start/End: Complemental strand, 11706995 - 11706918
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    |||||||||||||||||||||||| |||| ||| |||||||| ||| |||||||| ||| |  | |||||||||||||    
T  11706995 gcaaataaataagcttttatgtatcattcctaaacttgtcaatgtattttatgaagaaacaacttatgaagatacaat 11706918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 260
Target Start/End: Complemental strand, 33667476 - 33667396
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatac 260  Q
    |||||| ||||||||||||| |||||||||||||| | ||| || | |||||||||||||| ||||||||  ||||||||||    
T  33667476 agcttatgcaaataaataagtttttatgtattatttacaag-tttttaaggtagtttatgacaaaatagtatatgaagatac 33667396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 200 - 244
Target Start/End: Complemental strand, 5559985 - 5559941
Alignment:
Q  200 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||    
T  5559985 ttttatgtattcttcataagctcgtcaaggtagtttatgaaaaaa 5559941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 200 - 280
Target Start/End: Complemental strand, 23087842 - 23087762
Alignment:
Q  200 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    |||||||||||||| |||||||||| ||  ||||||||||||||| |  | |||||| |||||| |||||||| |||||||    
T  23087842 ttttatgtattatttataagcttgttaatatagtttatgaaaaaacaactcatgaaggtacaatttttgttagtgagaact 23087762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 18602618 - 18602669
Alignment:
Q  193 aataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||| |||||| |||||||||||||||||| ||||||| |||||||||||    
T  18602618 aataagtttttatttattattcataagcttgttaaggtagcttatgaaaaaa 18602669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 171 - 280
Target Start/End: Original strand, 29659055 - 29659163
Alignment:
Q  171 ttatttta-agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgt 269  Q
    |||||||| |||||| ||||||||||| |  ||||||||||||| |||||||||| || |||||||| ||||||| |||| |||||  |||||| ||  |    
T  29659055 ttattttagagcttatgcaaataaatatg--tttatgtattatttataagcttgttaatgtagtttaagaaaaaacagtttatgaaagtacaattttcat 29659152  T
Q  270 tagcgagaact 280  Q
    ||| |||||||    
T  29659153 tagtgagaact 29659163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 277
Target Start/End: Complemental strand, 5203517 - 5203420
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 277  Q
    |||||| |||||||||||||  ||||||||||||| ||||  || | |||||||||||||| |||||  || ||||||||||||  |||||||| ||||    
T  5203517 agcttatgcaaataaataagtatttatgtattatttataaattttt-aaggtagtttatgagaaaatcatttatgaagatacaaattttgttagagaga 5203420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 263
Target Start/End: Original strand, 7984109 - 7984191
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    |||| |||||||| |||| |||||||||||||||||||| ||||||| || ||||  ||||||| |||| |  ||||||||||    
T  7984109 cttatgcaaataactaagtttttatgtattattcataagtttgtcaaagttgtttgagaaaaaacagtttacaaagatacaat 7984191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 278
Target Start/End: Complemental strand, 29418835 - 29418737
Alignment:
Q  180 gcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaa 278  Q
    ||||| ||||||||||| |  ||||||||||||| |||||| ||  || |||||||||||||||| | || |||||| |||||| || ||||| |||||    
T  29418835 gcttatgcaaataaatatgtctttatgtattatttataagcatgctaatgtagtttatgaaaaaacaatttatgaaggtacaattttcgttagtgagaa 29418737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 32508206 - 32508156
Alignment:
Q  196 aagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaata 246  Q
    |||||||||| ||| |||||||| ||||| |||||||||||||||||||||    
T  32508206 aagcttttatttatcattcataaacttgttaaggtagtttatgaaaaaata 32508156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 186 - 271
Target Start/End: Complemental strand, 6026061 - 6025977
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgtta 271  Q
    ||||||||||| | |||||||||||||| ||||  |||| || ||||||||||||||||  ||| || |||||||||| |||||||    
T  6026061 gcaaataaatatg-ttttatgtattatttataattttgttaacgtagtttatgaaaaaacggtttataaagatacaatttttgtta 6025977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 200 - 237
Target Start/End: Original strand, 6150400 - 6150437
Alignment:
Q  200 ttttatgtattattcataagcttgtcaaggtagtttat 237  Q
    |||||||||||||||||||| |||||||||||||||||    
T  6150400 ttttatgtattattcataagtttgtcaaggtagtttat 6150437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 15413994 - 15414087
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 272  Q
    |||||| |||||||||||||  || |||||||||| ||||| |||| |||||||||||  |||||| |  | ||||| ||||||| ||||||||    
T  15413994 agcttatgcaaataaataagtattaatgtattattgataagtttgttaaggtagtttactaaaaaacaacttatgaatatacaatttttgttag 15414087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 272
Target Start/End: Original strand, 27805910 - 27806010
Alignment:
Q  171 ttattttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgtt 270  Q
    ||||||| | |||| |||||||||| ||||||| | | ||||| ||| ||||||||| |||||||||||||||| |  | || |||||||||| ||||||    
T  27805910 ttattttgaccttatgcaaataaatgagctttttt-tgttatttatacgcttgtcaatgtagtttatgaaaaaacatgttataaagatacaatttttgtt 27806008  T
Q  271 ag 272  Q
    ||    
T  27806009 ag 27806010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 255
Target Start/End: Original strand, 4728848 - 4728923
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaa 255  Q
    |||||| ||||||||||||| |||||||||||||  | ||| || | ||||||||||||||||||| |||| |||||    
T  4728848 agcttatgcaaataaataagtttttatgtattatctacaag-tttttaaggtagtttatgaaaaaacagtttatgaa 4728923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 28357306 - 28357254
Alignment:
Q  156 cccgtttgtattggtttatttta-agcttacgcaaataaataagcttttatgt 207  Q
    |||||||||||||| |||||||  |||||| ||||||||||||||||||||||    
T  28357306 cccgtttgtattggcttattttttagcttatgcaaataaataagcttttatgt 28357254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 188 - 243
Target Start/End: Complemental strand, 1372068 - 1372013
Alignment:
Q  188 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaa 243  Q
    |||||||||  ||||||||||||||| |||||||||| || || ||||||||||||    
T  1372068 aaataaatacacttttatgtattatttataagcttgtaaatgtggtttatgaaaaa 1372013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 188 - 259
Target Start/End: Complemental strand, 40152951 - 40152880
Alignment:
Q  188 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagata 259  Q
    ||||||||||| |||||| |||||| |||||  |||| ||| ||||||||||||||| | || |||||||||    
T  40152951 aaataaataagtttttatttattatccataaatttgttaagatagtttatgaaaaaacaatttatgaagata 40152880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 338
Target Start/End: Complemental strand, 40697019 - 40696988
Alignment:
Q  307 atttatttgcataagctcaaaaataagtcaat 338  Q
    ||||||||||||||||||||||||||||||||    
T  40697019 atttatttgcataagctcaaaaataagtcaat 40696988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 42558794 - 42558740
Alignment:
Q  189 aataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||||||||||||| ||| |||||||||| |||| || ||||||||||||||||    
T  42558794 aataaataagcttttacgtactattcataagtttgttaa-gtagtttatgaaaaaa 42558740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 255
Target Start/End: Original strand, 17668404 - 17668477
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaa 255  Q
    |||| ||||||||||| |  ||||||||||||| ||||| || | |||||||||||||||||||| ||| |||||    
T  17668404 cttatgcaaataaataggtgtttatgtattatttataagttttt-aaggtagtttatgaaaaaatcgtttatgaa 17668477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 247
Target Start/End: Complemental strand, 32131394 - 32131332
Alignment:
Q  185 cgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatag 247  Q
    |||||||||||||| |||||| || |||| |||| ||||||||| ||||  ||||||||||||    
T  32131394 cgcaaataaataagtttttatttactatttataaacttgtcaagatagtgcatgaaaaaatag 32131332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 246
Target Start/End: Original strand, 43010646 - 43010704
Alignment:
Q  188 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaata 246  Q
    |||||||||| ||||||||||||||||||| | ||||||  ||||||||| | ||||||    
T  43010646 aaataaataaacttttatgtattattcatacgtttgtcattgtagtttataataaaata 43010704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 244
Target Start/End: Complemental strand, 2577481 - 2577448
Alignment:
Q  211 attcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    ||||||||||||||||||||| ||||||||||||    
T  2577481 attcataagcttgtcaaggtaatttatgaaaaaa 2577448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 208
Target Start/End: Original strand, 3520452 - 3520481
Alignment:
Q  179 agcttacgcaaataaataagcttttatgta 208  Q
    ||||||||||||||||||||||||||||||    
T  3520452 agcttacgcaaataaataagcttttatgta 3520481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 7111060 - 7110981
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgt 269  Q
    ||||||||||||| | |||| ||||||||||||| |||||||   |||||||| ||||| || | ||||||||||||| |||||    
T  7111060 gcaaataaataagttcttatttattattcataagattgtcaa---agtttatg-aaaaacagcttatgaagatacaatttttgt 7110981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 244
Target Start/End: Original strand, 14243825 - 14243890
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||| | |||||||||||||| |||||| |||||||||| |  | ||||||||||||| |||||    
T  14243825 agcttatgtaaataaataagcttctatgtaatattcataagttgtttaaggtagtttatggaaaaa 14243890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 242
Target Start/End: Original strand, 22573657 - 22573718
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaa 242  Q
    |||| |||||||||| || |||| ||||||||| ||||| |||| || ||||||||||||||    
T  22573657 cttatgcaaataaatgagtttttttgtattatttataagtttgtaaatgtagtttatgaaaa 22573718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 240
Target Start/End: Complemental strand, 25332322 - 25332261
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 240  Q
    |||||| |||||||||||||| || || ||||||| ||||| |||| |||||| ||||||||    
T  25332322 agcttatgcaaataaataagcattaatatattatttataagtttgttaaggtaatttatgaa 25332261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 243
Target Start/End: Complemental strand, 29658115 - 29658074
Alignment:
Q  202 ttatgtattattcataagcttgtcaaggtagtttatgaaaaa 243  Q
    |||||||||||||||||| |||| || |||||||||||||||    
T  29658115 ttatgtattattcataagtttgtaaatgtagtttatgaaaaa 29658074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 30852180 - 30852237
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaa 243  Q
    |||||||||||| ||||||||||||||| ||||| | || || ||||||||| |||||    
T  30852180 gcaaataaataaacttttatgtattattaataagttcgtaaatgtagtttataaaaaa 30852237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 33803870 - 33803814
Alignment:
Q  186 gcaaataaataagcttttatgtattat--tcataagcttgtcaaggtagtttatgaa 240  Q
    |||||| |||||||||||||||| |||  ||||||  ||||||||||||||||||||    
T  33803870 gcaaatcaataagcttttatgtactatattcataaatttgtcaaggtagtttatgaa 33803814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 244
Target Start/End: Complemental strand, 39154809 - 39154780
Alignment:
Q  215 ataagcttgtcaaggtagtttatgaaaaaa 244  Q
    ||||||||||||||||||||||||||||||    
T  39154809 ataagcttgtcaaggtagtttatgaaaaaa 39154780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 8e-31; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 180 - 280
Target Start/End: Original strand, 28074368 - 28074467
Alignment:
Q  180 gcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaac 279  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||| || |||||||| |||    
T  28074368 gcttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa-agcttatgaagatacaattttcgttagcgaaaac 28074466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 149 - 244
Target Start/End: Original strand, 7148743 - 7148839
Alignment:
Q  149 tataagacccgtttgtattggtttatttta-agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||| |||||||| ||||| |||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  7148743 tataaggcccgtttggattggcttatttttgagcttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttttgaaaaaa 7148839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 179 - 280
Target Start/End: Original strand, 23297440 - 23297538
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaa 278  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |   | | ||||||||||||| ||||||||||||||    
T  23297440 agcttatgcaaataaataagcttttatgtattattcataagtttgtcaaggtagtttatgaaaca---gcttatgaagatacaatttttgttagcgagaa 23297536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 186 - 280
Target Start/End: Original strand, 29877648 - 29877742
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||  || | ||||||||||||| |||||||| |||||||    
T  29877648 gcaaataaataagcttttatgtattattcataagcttgctaaggtagtttatgaaaaagcagcttatgaagatacaatttttgttagtgagaact 29877742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 179 - 280
Target Start/End: Complemental strand, 12495730 - 12495627
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtc--aaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgag 276  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| || |||| |||||||||| ||  |||| |||    
T  12495730 agcttatgcaaataaataagcttttatgtattattcataagcttgtcaaaaggtagtttatgaaaaaacagctaatcaagatacaatattcattagtgag 12495631  T
Q  277 aact 280  Q
    ||||    
T  12495630 aact 12495627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 174 - 280
Target Start/End: Complemental strand, 488473 - 488367
Alignment:
Q  174 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagc 273  Q
    |||| |||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| | |  | |||||||||| ||| ||||     
T  488473 ttttgagcttatgcaaataagtaagcttttatgtattattaataagcttgtcaaggtagtttatgaaaaaattgcttgtaaagatacaatttttattagt 488374  T
Q  274 gagaact 280  Q
    |||||||    
T  488373 gagaact 488367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 174 - 280
Target Start/End: Original strand, 36740901 - 36741007
Alignment:
Q  174 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagc 273  Q
    |||| |||||| |||||||||||||||||||| |||||| |||||||||||||| |||||||||||||| | |||| ||||||||||||| ||  ||||     
T  36740901 ttttgagcttatgcaaataaataagcttttatatattatgcataagcttgtcaaagtagtttatgaaaatacagttcatgaagatacaattttcattagt 36741000  T
Q  274 gagaact 280  Q
    |||||||    
T  36741001 gagaact 36741007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 35124389 - 35124482
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 272  Q
    |||||| ||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||| || | ||||||||||||  ||||||||    
T  35124389 agcttatgcaaatatataaccttttatgtactattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaaattttgttag 35124482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 179 - 280
Target Start/End: Complemental strand, 48591508 - 48591407
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaa 278  Q
    |||||| ||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||| || | ||||||||||||| || ||||  |||||    
T  48591508 agcttatgcaaataaataagtttttatatattattcatacgcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttaatgagaa 48591409  T
Q  279 ct 280  Q
    ||    
T  48591408 ct 48591407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 171 - 280
Target Start/End: Complemental strand, 55638173 - 55638064
Alignment:
Q  171 ttattttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgtt 270  Q
    |||||||||| ||| ||||||||| |||||||||||||||||||||||| |||| ||  ||||||||||||||| |||| || ||||||||||||  |||    
T  55638173 ttattttaagtttatgcaaataaacaagcttttatgtattattcataagtttgtaaatatagtttatgaaaaaacagtttataaagatacaatctccgtt 55638074  T
Q  271 agcgagaact 280  Q
    || |||||||    
T  55638073 agtgagaact 55638064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 172 - 244
Target Start/End: Original strand, 896965 - 897037
Alignment:
Q  172 tattttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||| |||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  896965 tattttgagcttatgcaaataaataaacttttatgtattattcataagcttgtcaatgtagtttatgaaaaaa 897037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 174 - 280
Target Start/End: Complemental strand, 52274209 - 52274103
Alignment:
Q  174 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagc 273  Q
    |||| |||||| |||||||||||| ||||||||||||||| |||||||| ||||||||||||| ||||||| || | ||||||||||||| || || ||     
T  52274209 ttttgagcttatgcaaataaataaacttttatgtattattgataagcttatcaaggtagtttacgaaaaaacagcttatgaagatacaattttcgtcagt 52274110  T
Q  274 gagaact 280  Q
    |||||||    
T  52274109 gagaact 52274103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 200 - 272
Target Start/End: Original strand, 17222852 - 17222924
Alignment:
Q  200 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||| || |||||    
T  17222852 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagattatgaagatacaattttcgttag 17222924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 187 - 271
Target Start/End: Complemental strand, 18424353 - 18424270
Alignment:
Q  187 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgtta 271  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||| | || ||||||||||||| |||||||    
T  18424353 caaataaataagcttttatgtattattcataaacttgtgaaggtagtttatga-aaaacaatttatgaagatacaatttttgtta 18424270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 179 - 263
Target Start/End: Original strand, 23335644 - 23335728
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    |||||| |||||||||| || ||||||||||||||||||||| | ||||||||||||||||||||| || | |||||||||||||    
T  23335644 agcttatgcaaataaatgagattttatgtattattcataagcatatcaaggtagtttatgaaaaaacagcttatgaagatacaat 23335728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 174 - 272
Target Start/End: Original strand, 825679 - 825777
Alignment:
Q  174 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 272  Q
    |||| |||||| |||||||||||||||||| | |||||||||||||| |||| || ||||||||||||||| || | ||||||||||| | ||||||||    
T  825679 ttttgagcttatgcaaataaataagcttttctatattattcataagcctgtctagttagtttatgaaaaaacagctcatgaagatacattttttgttag 825777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 179 - 280
Target Start/End: Original strand, 948074 - 948176
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatg-aaaaaatagttaatgaagatacaatctttgttagcgaga 277  Q
    |||||| | |||||||||||||||||||||||||||||||  |||||||||||||||||| |||||| || | || |||||||||| ||||| || ||||    
T  948074 agcttatgaaaataaataagcttttatgtattattcataactttgtcaaggtagtttatgaaaaaaacagcttataaagatacaatttttgtcagagaga 948173  T
Q  278 act 280  Q
    |||    
T  948174 act 948176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 181 - 263
Target Start/End: Complemental strand, 27368234 - 27368152
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    |||| |||||||||||||||||||| ||||||||||||| ||||||| |||| ||||||||||| |||| || ||||||||||    
T  27368234 cttatgcaaataaataagcttttatatattattcataagtttgtcaatgtagcttatgaaaaaacagtttataaagatacaat 27368152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 174 - 280
Target Start/End: Complemental strand, 39932843 - 39932737
Alignment:
Q  174 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagc 273  Q
    |||||| |||| |||||||||||| ||||||||||||||| ||||| |||| |||||||| |||||||||| | || ||||||||||||| | | ||||     
T  39932843 ttttaaacttatgcaaataaataaacttttatgtattatttataagattgttaaggtagtgtatgaaaaaacaatttatgaagatacaatttctattagt 39932744  T
Q  274 gagaact 280  Q
    |||||||    
T  39932743 gagaact 39932737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 171 - 272
Target Start/End: Original strand, 8601195 - 8601296
Alignment:
Q  171 ttattttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgtt 270  Q
    ||||||| |||||| |||||||||| ||||||| | ||||||| |||||| |||||| ||||||||||||||||  | | ||||||||||||| ||||||    
T  8601195 ttattttgagcttatgcaaataaatgagcttttttctattatttataagcctgtcaatgtagtttatgaaaaaactggttatgaagatacaatttttgtt 8601294  T
Q  271 ag 272  Q
    ||    
T  8601295 ag 8601296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 187 - 280
Target Start/End: Complemental strand, 38345897 - 38345805
Alignment:
Q  187 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    |||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||| |  | ||||||||||||| ||| ||||| ||||||    
T  38345897 caaataaataagcttttatgtagtattcataag-ttgtcaaagtagtttatgaaaaaacaacttatgaagatacaatttttattagccagaact 38345805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 43699559 - 43699502
Alignment:
Q  187 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  43699559 caaataaataagcttttatgtcttattcataagcttgtcaatgtagtttatgaaaaaa 43699502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 188 - 260
Target Start/End: Complemental strand, 2494475 - 2494403
Alignment:
Q  188 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatac 260  Q
    ||||| |||||||||||  ||||||| |||||||||| |||||||||||||||||||||||| ||||||||||    
T  2494475 aaatagataagcttttacatattatttataagcttgtaaaggtagtttatgaaaaaatagtttatgaagatac 2494403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 179 - 263
Target Start/End: Complemental strand, 46176062 - 46175979
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    |||||| ||||||||||||| |||||||||||||| ||||  || | |||||||||||||||||||||||| |||||||||||||    
T  46176062 agcttatgcaaataaataagtttttatgtattatttataaattttt-aaggtagtttatgaaaaaatagtttatgaagatacaat 46175979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 200 - 263
Target Start/End: Complemental strand, 21216391 - 21216328
Alignment:
Q  200 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| | |||||| ||||||    
T  21216391 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaagtaggttatgaagctacaat 21216328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 186 - 280
Target Start/End: Complemental strand, 8057165 - 8057071
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    ||||| ||||||| |||||| |||||||||||||||||||||||||| ||| |||||||   || ||||||||||||| |||||| | |||||||    
T  8057165 gcaaaaaaataagtttttatttattattcataagcttgtcaaggtagcttaagaaaaaacgatttatgaagatacaatatttgttcgtgagaact 8057071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 188 - 262
Target Start/End: Original strand, 35010222 - 35010296
Alignment:
Q  188 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaa 262  Q
    ||||||||||| |||||||||||||| ||||| ||||||| ||||||||||| ||||||||| || |||||||||    
T  35010222 aaataaataagtttttatgtattatttataagtttgtcaacgtagtttatgataaaatagtttataaagatacaa 35010296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 243
Target Start/End: Original strand, 3564222 - 3564286
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaa 243  Q
    |||||| | |||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||    
T  3564222 agcttatgaaaataaataaacttttatatattattcataagtttgtcaaggtagtttatgaaaaa 3564286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 277
Target Start/End: Complemental strand, 4603413 - 4603318
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 277  Q
    |||| ||||||||||||| |||||||||||||| ||||  || | ||||||||||||||||||| |||| ||||||||||||| || ||||| ||||    
T  4603413 cttatgcaaataaataagtttttatgtattatttataatttttt-aaggtagtttatgaaaaaacagtttatgaagatacaattttcgttagtgaga 4603318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 191 - 263
Target Start/End: Original strand, 41228917 - 41228989
Alignment:
Q  191 taaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    |||||| |||||||| |||||||||||||||||| ||||||||||||||||||| |  | |||||||||||||    
T  41228917 taaataggcttttatttattattcataagcttgttaaggtagtttatgaaaaaacaactgatgaagatacaat 41228989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 188 - 260
Target Start/End: Complemental strand, 52700619 - 52700547
Alignment:
Q  188 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatac 260  Q
    |||||||||||  ||||||||||||| |||||||||| || || |||||||||||||||||| ||||||||||    
T  52700619 aaataaataagtctttatgtattatttataagcttgtaaaagtggtttatgaaaaaatagtttatgaagatac 52700547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 181 - 244
Target Start/End: Complemental strand, 213029 - 212967
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||| ||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||    
T  213029 cttatgcaaataaataag-ttttatttattattcataagcttgttaaggtagtttatgaaaaaa 212967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 157 - 263
Target Start/End: Original strand, 2141620 - 2141727
Alignment:
Q  157 ccgtttgtattggtttatttta-agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaa 255  Q
    ||||||| ||| | |||||||| |||||| |||||||||||||||||||||| ||||| ||||  |||| ||||||  |||| |||||| |||| |||||    
T  2141620 ccgtttgaattagcttattttagagcttatgcaaataaataagcttttatgtgttatttataactttgttaaggtatattataaaaaaacagtttatgaa 2141719  T
Q  256 gatacaat 263  Q
    ||||||||    
T  2141720 gatacaat 2141727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 186 - 277
Target Start/End: Original strand, 46650280 - 46650371
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 277  Q
    ||||||||||||||||| |||||||||||||||  |||| |  ||||||||||||||||||||| || |||| ||||| || ||||| ||||    
T  46650280 gcaaataaataagctttcatgtattattcataaatttgtaattgtagtttatgaaaaaatagtttataaagaaacaattttcgttagtgaga 46650371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 193 - 280
Target Start/End: Complemental strand, 46704340 - 46704253
Alignment:
Q  193 aataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    ||||||||||||| |||||||||| ||||||| ||||||||||||||||||| || | ||||||||| ||| ||  |||| |||||||    
T  46704340 aataagcttttatttattattcatgagcttgttaaggtagtttatgaaaaaacagcttatgaagataaaattttcattagtgagaact 46704253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 4331350 - 4331404
Alignment:
Q  190 ataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||||||||||||| ||||||||||||  ||||||||||||||||||||||||    
T  4331350 ataaataagcttttatttattattcataactttgtcaaggtagtttatgaaaaaa 4331404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 29615352 - 29615438
Alignment:
Q  156 cccgtttgtattggtttatttta-agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaa 241  Q
    |||||||| |||||||||||||  || ||| | |||||||||||||| ||||||||||||||||||||||   ||||||||||||||    
T  29615352 cccgtttgaattggtttattttcgagtttatgtaaataaataagcttatatgtattattcataagcttgtagtggtagtttatgaaa 29615438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 186 - 272
Target Start/End: Complemental strand, 43415366 - 43415280
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 272  Q
    ||||||||||||| |||||||||||||||||||| |||| || |||||||| ||||||| | || || |||||| ||| ||||||||    
T  43415366 gcaaataaataagtttttatgtattattcataaggttgttaatgtagtttacgaaaaaacaatttatcaagatataatatttgttag 43415280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 194 - 263
Target Start/End: Original strand, 2405205 - 2405273
Alignment:
Q  194 ataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    ||||||| |||||||||||| ||||||||||||| ||||||||||||||||||| | ||| |||||||||    
T  2405205 ataagctattatgtattatt-ataagcttgtcaatgtagtttatgaaaaaatagcttatgtagatacaat 2405273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 179 - 240
Target Start/End: Original strand, 8130490 - 8130551
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 240  Q
    |||||| ||||||||||||||||||||| |||||||||||| |||||| ||||| |||||||    
T  8130490 agcttatgcaaataaataagcttttatgcattattcataagtttgtcagggtagcttatgaa 8130551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 179 - 280
Target Start/End: Original strand, 15184549 - 15184649
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaa 278  Q
    |||||| | ||||||||||| |||||||||||||| ||||  || | ||| ||||||||||||||| |||| ||||||||||||| || ||||| |||||    
T  15184549 agcttatgtaaataaataagtttttatgtattatttataattttttaaag-tagtttatgaaaaaacagtttatgaagatacaattttcgttagtgagaa 15184647  T
Q  279 ct 280  Q
    ||    
T  15184648 ct 15184649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 42611950 - 42611870
Alignment:
Q  181 cttacgcaaataaataagcttt-tatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagataca 261  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||| |  | |||||||||||    
T  42611950 cttatgcaaataaataagctttatatgtattattcataagcttgtcga-gtagtttatgaaaaaacaacttatgaagataca 42611870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 184 - 237
Target Start/End: Original strand, 48686956 - 48687009
Alignment:
Q  184 acgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttat 237  Q
    ||||||||||||||| ||||||||| |||||||||||||||||| |||||||||    
T  48686956 acgcaaataaataagtttttatgtactattcataagcttgtcaacgtagtttat 48687009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 259
Target Start/End: Complemental strand, 42617313 - 42617234
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagata 259  Q
    |||||| ||||||||||| | ||||| |||||||| ||||| || | |||||||||||||||||||||||| |||||||||    
T  42617313 agcttatgcaaataaatacgtttttaagtattatttataagttttt-aaggtagtttatgaaaaaatagtttatgaagata 42617234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 244
Target Start/End: Complemental strand, 1374445 - 1374382
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||| ||||||||| ||| ||||||| || |||||||||||||||| |||||||||||||||||    
T  1374445 cttatgcaaataaaaaagtttttatgcatgattcataagcttgtcatggtagtttatgaaaaaa 1374382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 188 - 263
Target Start/End: Complemental strand, 10794984 - 10794910
Alignment:
Q  188 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    ||||||||||| |||||||||||||| | ||||| || ||||| |||||||| ||||||||| |||||||||||||    
T  10794984 aaataaataagtttttatgtattatttaaaagctcgttaaggtggtttatga-aaaatagtttatgaagatacaat 10794910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 192 - 263
Target Start/End: Original strand, 32628793 - 32628864
Alignment:
Q  192 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    |||||||||||| ||| ||||||||||||||||| ||||| |||||||||||| || |  ||||||||||||    
T  32628793 aaataagcttttttgtgttattcataagcttgtcgaggtaatttatgaaaaaacagcttgtgaagatacaat 32628864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 198 - 244
Target Start/End: Complemental strand, 29997375 - 29997329
Alignment:
Q  198 gcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  29997375 gcttttatatattattcataagcttatcaaggtagtttatgaaaaaa 29997329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 30956692 - 30956750
Alignment:
Q  187 caaataaataagctttt-atgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    ||||||||||||||||| |||||||| ||| |||||| |||||||||||||||||||||    
T  30956692 caaataaataagctttttatgtattactcacaagcttctcaaggtagtttatgaaaaaa 30956750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 7206670 - 7206605
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||| |||||| ||||||||||||| |||||||||  ||| ||| |||||||||||||||||||    
T  7206670 agcttatgcaaatgaataagcttttatttattattcacgagcctgttaaggtagtttatgaaaaaa 7206605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 263
Target Start/End: Original strand, 28663606 - 28663659
Alignment:
Q  210 tattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    ||||||||||||||||||||||||||||||||||| || |  ||||||||||||    
T  28663606 tattcataagcttgtcaaggtagtttatgaaaaaacagattctgaagatacaat 28663659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 244
Target Start/End: Original strand, 40699358 - 40699423
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||| ||||||||||||  ||||||||| |   |||||||||||||||||||||||||||||||    
T  40699358 agcttatgcaaataaataaatttttatgtagtgcgcataagcttgtcaaggtagtttatgaaaaaa 40699423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 244
Target Start/End: Complemental strand, 43983482 - 43983401
Alignment:
Q  164 tattggtttatttta-agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||| |||||||| ||||||  ||||||||||||| || |||||||||| |||||||||| ||| |||||||| ||||||    
T  43983482 tattggcttattttagagcttatacaaataaataagcattaatgtattatttataagcttgttaagatagtttataaaaaaa 43983401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 259
Target Start/End: Original strand, 19725295 - 19725375
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagata 259  Q
    |||||| |||| |||||| | |||||||||||||| ||||| |||| |||||| |||||||||||| |||  |||||||||    
T  19725295 agcttatgcaattaaatacgtttttatgtattatttataagtttgttaaggtattttatgaaaaaacagtctatgaagata 19725375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 188 - 263
Target Start/End: Original strand, 10796397 - 10796471
Alignment:
Q  188 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    ||||||||||| |||||||||||||| | ||||| || ||| | ||||||| |||||||||| |||||||||||||    
T  10796397 aaataaataagtttttatgtattatttaaaagctcgttaagatggtttatg-aaaaatagtttatgaagatacaat 10796471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 197 - 280
Target Start/End: Complemental strand, 18630961 - 18630878
Alignment:
Q  197 agcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    ||||||||| |||||| ||| ||||||| ||||||||||||||||||| || | ||||||||| | | || ||||| |||||||    
T  18630961 agcttttatttattatccatgagcttgttaaggtagtttatgaaaaaacagcttatgaagataaagttttcgttagtgagaact 18630878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 205 - 280
Target Start/End: Complemental strand, 36255094 - 36255019
Alignment:
Q  205 tgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    |||||| |||||||||||||||| ||||||| |||||||| || | ||||||||||||| ||  |||| |||||||    
T  36255094 tgtattgttcataagcttgtcaacgtagtttgtgaaaaaacagcttatgaagatacaattttaattagtgagaact 36255019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 277
Target Start/End: Original strand, 47202828 - 47202925
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 277  Q
    |||||| ||||||||||||| |||||||||||| | ||||  || | |||||||||||||||||||   || ||||||||||||| || ||||| ||||    
T  47202828 agcttatgcaaataaataagtttttatgtattacttataa-atttttaaggtagtttatgaaaaaaccatttatgaagatacaattttcgttagtgaga 47202925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 240
Target Start/End: Original strand, 11298595 - 11298656
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 240  Q
    |||||| |||| ||| ||||||||||| |||||||||| ||||| | |||||||||||||||    
T  11298595 agcttatgcaagtaattaagcttttatttattattcatgagcttcttaaggtagtttatgaa 11298656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 186 - 255
Target Start/End: Complemental strand, 26206431 - 26206362
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaa 255  Q
    ||||||||||| |  ||||||||||||| ||||| |||| || |||||||||||||||| |||| |||||    
T  26206431 gcaaataaatatgtctttatgtattatttataagattgttaacgtagtttatgaaaaaacagtttatgaa 26206362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 207
Target Start/End: Complemental strand, 34633536 - 34633503
Alignment:
Q  174 ttttaagcttacgcaaataaataagcttttatgt 207  Q
    ||||||||||||||||||||||||||||||||||    
T  34633536 ttttaagcttacgcaaataaataagcttttatgt 34633503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 259
Target Start/End: Complemental strand, 2548131 - 2548051
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagata 259  Q
    |||||| ||||||||||||| |||||| | |||||||| ||| | | ||| ||||||||||||||| | || |||||||||    
T  2548131 agcttatgcaaataaataagtttttatttgttattcatgagcctattaagttagtttatgaaaaaacaatttatgaagata 2548051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 227 - 278
Target Start/End: Original strand, 22273830 - 22273881
Alignment:
Q  227 aggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaa 278  Q
    |||||||||||||||||| || | ||||||||||||| |||||||| |||||    
T  22273830 aggtagtttatgaaaaaacagcttatgaagatacaatttttgttagtgagaa 22273881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 158 - 244
Target Start/End: Complemental strand, 22397411 - 22397324
Alignment:
Q  158 cgtttgtattggtttatttta-agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||| |||| ||||||||| ||||||  |||||||||||   || |||||||||| |||||  ||| |||||||||||||||||||    
T  22397411 cgtttgaattgatttattttagagcttatacaaataaataaatattaatgtattatttataagtctgttaaggtagtttatgaaaaaa 22397324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 338
Target Start/End: Complemental strand, 28663446 - 28663415
Alignment:
Q  307 atttatttgcataagctcaaaaataagtcaat 338  Q
    ||||||||||||||||||||||||||||||||    
T  28663446 atttatttgcataagctcaaaaataagtcaat 28663415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 33533932 - 33533995
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||| ||||||  ||||||||  | |||||||||||||| | ||||||||||||||||||||||    
T  33533932 cttatgcaaatttataagcttcaaggtattattcataagttagtcaaggtagtttatgaaaaaa 33533995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 338
Target Start/End: Complemental strand, 36740922 - 36740891
Alignment:
Q  307 atttatttgcataagctcaaaaataagtcaat 338  Q
    ||||||||||||||||||||||||||||||||    
T  36740922 atttatttgcataagctcaaaaataagtcaat 36740891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 188 - 263
Target Start/End: Complemental strand, 43740150 - 43740076
Alignment:
Q  188 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    ||||||||||| |||||  |||||||||||| |||||| | ||| ||||||| |||| |||| |||||||||||||    
T  43740150 aaataaataagtttttacatattattcataaacttgtctaagtaatttatga-aaaacagtttatgaagatacaat 43740076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 192 - 263
Target Start/End: Original strand, 45018548 - 45018619
Alignment:
Q  192 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    ||||||| |||||| |||||||||| || |||| || |||||||||||||||| |  | |||||||||||||    
T  45018548 aaataagattttatttattattcatgagattgttaaagtagtttatgaaaaaacaacttatgaagatacaat 45018619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 29996716 - 29996678
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgt 224  Q
    |||||||||||||||||||| ||||||||||||| ||||    
T  29996716 gcaaataaataagcttttatatattattcataagtttgt 29996678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 338
Target Start/End: Original strand, 488454 - 488483
Alignment:
Q  309 ttatttgcataagctcaaaaataagtcaat 338  Q
    ||||||||||||||||||||||||||||||    
T  488454 ttatttgcataagctcaaaaataagtcaat 488483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 258
Target Start/End: Original strand, 9201655 - 9201731
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagat 258  Q
    |||| ||||||||||||| |||||||||||||| ||||| || ||||| || |||||| ||||| || | ||||||||    
T  9201655 cttatgcaaataaataagtttttatgtattatttataag-ttttcaagctattttatggaaaaacaggttatgaagat 9201731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 15179820 - 15179912
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 272  Q
    |||||| |||||||||||   |||||||||||||| ||||| || | ||||||||||||||| |||| | | ||||| ||||||| || |||||    
T  15179820 agcttatgcaaataaatatatttttatgtattatttataag-tttttaaggtagtttatgaagaaatggattatgaaaatacaattttcgttag 15179912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 226
Target Start/End: Complemental strand, 38515726 - 38515689
Alignment:
Q  189 aataaataagcttttatgtattattcataagcttgtca 226  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  38515726 aataaataagcctctatgtattattcataagcttgtca 38515689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 22117358 - 22117421
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaat 245  Q
    |||| |||||||||||   |||||||||||||| ||||| || | ||||||||||||||||||||    
T  22117358 cttatgcaaataaatacatttttatgtattatttataagttttt-aaggtagtttatgaaaaaat 22117421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 334
Target Start/End: Original strand, 40699456 - 40699512
Alignment:
Q  280 tgagaacttatgaattaa-agaaaat-taatttatttgcataagctcaaaaataagt 334  Q
    |||||||||||||||||| | ||||| | |||| |||||||||||||||||||||||    
T  40699456 tgagaacttatgaattaacataaaatcttatttgtttgcataagctcaaaaataagt 40699512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 261
Target Start/End: Complemental strand, 42153245 - 42153193
Alignment:
Q  209 ttattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagataca 261  Q
    ||||||| |||||||||| ||||||||||| |||||||| |  ||||||||||    
T  42153245 ttattcagaagcttgtcatggtagtttatgtaaaaatagcttctgaagataca 42153193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 8e-31; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 180 - 280
Target Start/End: Original strand, 4026929 - 4027028
Alignment:
Q  180 gcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaac 279  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || | ||||||||||||| |||||||| ||||||    
T  4026929 gcttatgcaaataaataagcttttatgtattat-cataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgttagtgagaac 4027027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 186 - 277
Target Start/End: Complemental strand, 33321389 - 33321298
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 277  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || | ||||||||||||| |||||||| ||||    
T  33321389 gcaaataaataagcttttatgtcttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgttagtgaga 33321298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 186 - 280
Target Start/End: Complemental strand, 13056404 - 13056310
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||| | |||||||| |||| || |||| ||||||||    
T  13056404 gcaaatagataagcttttatgtatttttcataagcttgtcaaggtagtttataaaaaaatagcttatgaagatgcaattttcgttaacgagaact 13056310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 25836796 - 25836731
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  25836796 agcttatgcaaataaatatgcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 25836731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 181 - 280
Target Start/End: Complemental strand, 755824 - 755724
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa-aaaatagttaatgaagatacaatctttgttagcgagaac 279  Q
    ||||||||||||| ||||||||||||||||||||| |||||||| | ||||||||||||| |||| || | ||||||||||||| |||||||| ||||||    
T  755824 cttacgcaaataattaagcttttatgtattattcagaagcttgttacggtagtttatgaaaaaaacagcttatgaagatacaatttttgttagtgagaac 755725  T
Q  280 t 280  Q
    |    
T  755724 t 755724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 159 - 280
Target Start/End: Original strand, 887393 - 887515
Alignment:
Q  159 gtttgtattggtttattt-taagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaaga 257  Q
    ||||| ||||| |||||| | |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||   | | |||||||    
T  887393 gtttggattggattatttctgagcttatgcaaataaataagcttttttgtattattcataagcttgtcaaggtagtttatgtaaaacctgcttatgaaga 887492  T
Q  258 tacaatctttgttagcgagaact 280  Q
    |||||| ||  ||||| ||||||    
T  887493 tacaattttcattagcaagaact 887515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 174 - 260
Target Start/End: Original strand, 12223849 - 12223935
Alignment:
Q  174 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatac 260  Q
    ||||||||||  |||||||| ||| |||| ||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||    
T  12223849 ttttaagcttttgcaaataagtaacctttcatgtattattcataagcctgtcaaggtagtttatgaaaaaacagtttatgaagatac 12223935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 179 - 280
Target Start/End: Original strand, 11776986 - 11777087
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaa 278  Q
    |||||| ||| |||||||||||||||||||||||| |||||||||| ||| ||||||||||||| | || | ||||||||||| | |||||||| |||||    
T  11776986 agcttatgcatataaataagcttttatgtattatttataagcttgttaagttagtttatgaaaacacagcttatgaagatacactttttgttagtgagaa 11777085  T
Q  279 ct 280  Q
    ||    
T  11777086 ct 11777087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 179 - 280
Target Start/End: Original strand, 38216025 - 38216122
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaa 278  Q
    |||||| ||||||||||||    ||||||||||||||||||||||||||||||||||| ||||||||||   ||||||||||||| || ||||| |||||    
T  38216025 agcttatgcaaataaataa----ttatgtattattcataagcttgtcaaggtagtttaggaaaaaatagcatatgaagatacaattttcgttagtgagaa 38216120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 179 - 280
Target Start/End: Original strand, 4090491 - 4090592
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaa 278  Q
    |||||| |||||||||||| |||| ||||||||||||||| ||||||||||||||  ||||||||| || | | ||||||||||| || |||| ||||||    
T  4090491 agcttatgcaaataaataaactttgatgtattattcataatcttgtcaaggtagtcaatgaaaaaacagcttacgaagatacaattttcgttaccgagaa 4090590  T
Q  279 ct 280  Q
    ||    
T  4090591 ct 4090592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 34913474 - 34913409
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||| |||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||    
T  34913474 agcttatgcaaataaataagcttttatgtattattcataagtttgttaagatagtttatgaaaaaa 34913409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 195 - 280
Target Start/End: Complemental strand, 36501583 - 36501498
Alignment:
Q  195 taagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||| ||| |  ||||| |||||||    
T  36501583 taagtttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagataaaatttgcgttagtgagaact 36501498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 12238582 - 12238502
Alignment:
Q  165 attggtttatttta-agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    ||||| |||||||| |||||| |||||||||||||| || |||||||||| |||||||||| |||||||||||||||||||    
T  12238582 attggcttattttagagcttatgcaaataaataagcattaatgtattatttataagcttgttaaggtagtttatgaaaaaa 12238502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 181 - 277
Target Start/End: Original strand, 21788461 - 21788557
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 277  Q
    |||| |||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||| |  | ||||||||| ||| || ||||| ||||    
T  21788461 cttatgcaaataaataagcttttatttattattcataagcttgttaagatagtttatgaaaaaacaacttatgaagataaaattttcgttagtgaga 21788557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 181 - 244
Target Start/End: Complemental strand, 33321485 - 33321422
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||| |||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  33321485 cttatgcaaataattaagtttttatgtattactcataagcttgtcaaggtagtttatgaaaaaa 33321422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 179 - 263
Target Start/End: Complemental strand, 2790155 - 2790070
Alignment:
Q  179 agcttacgcaaataaataa-gcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    |||||| |||||||||||| ||||||||| |||||| ||||||||||||||||| |||||||| ||| || | |||||||||||||    
T  2790155 agcttatgcaaataaataaagcttttatgcattattgataagcttgtcaaggtattttatgaataaacagcttatgaagatacaat 2790070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 280
Target Start/End: Original strand, 735991 - 736067
Alignment:
Q  204 atgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    |||||||||| |||||||||| ||||| |||||||||||||||||| ||||||||| ||| |||||||  |||||||    
T  735991 atgtattatttataagcttgttaaggtggtttatgaaaaaatagtttatgaagatataatttttgttattgagaact 736067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 181 - 280
Target Start/End: Original strand, 29774749 - 29774848
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    |||| |||||||||||| |||||||| ||||||||| || |||| |||||||||||||||||||  | | ||||| ||||||| || ||||| |||||||    
T  29774749 cttatgcaaataaataaacttttatgcattattcattagtttgttaaggtagtttatgaaaaaacggcttatgaaaatacaattttcgttagtgagaact 29774848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 181 - 294
Target Start/End: Original strand, 5903537 - 5903648
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    |||| ||||||||| |||| ||  ||||||| ||||||||||||||| |||||| ||||||||| |  | ||||||||||||| |||||||| ||||  |    
T  5903537 cttatgcaaataaacaagcattagtgtattactcataagcttgtcaaagtagttaatgaaaaaacatcttatgaagatacaatttttgttagtgaga--t 5903634  T
Q  281 gagaacttatgaat 294  Q
    ||||||||| ||||    
T  5903635 gagaacttaagaat 5903648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 11072955 - 11073013
Alignment:
Q  187 caaataaataagcttttatgtatt-attcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  11072955 caaacaaataagcttttttgtattcattcataagcttgtcaaggtagtttatgaaaaaa 11073013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 195 - 261
Target Start/End: Original strand, 12442831 - 12442897
Alignment:
Q  195 taagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagataca 261  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||  || | |||||||||||    
T  12442831 taagcttttaggtattattcataagcttgtcaagatagtttatgaaaaagcagcttatgaagataca 12442897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 181 - 271
Target Start/End: Original strand, 37409647 - 37409737
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgtta 271  Q
    |||| ||||||||||||||||||| |||||||||   || ||||||| |||||||||||||||| | || ||||| ||||||| |||||||    
T  37409647 cttatgcaaataaataagcttttaagtattattctctagtttgtcaatgtagtttatgaaaaaacaatttatgaaaatacaatttttgtta 37409737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 179 - 272
Target Start/End: Complemental strand, 32522129 - 32522037
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 272  Q
    |||||| | ||||||||||| |||||||||||||| ||||  || | ||||||||||||||||||| |||| ||||||||||||| || |||||    
T  32522129 agcttatgtaaataaataagtttttatgtattatttataatttttt-aaggtagtttatgaaaaaacagttcatgaagatacaattttcgttag 32522037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 179 - 280
Target Start/End: Complemental strand, 38471875 - 38471774
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaa 278  Q
    |||||| ||||||||||| |||||||||| ||||  |||||||| |  | |||||||||||||||| |||| |||||| |||||| || ||||| |||||    
T  38471875 agcttatgcaaataaatatgcttttatgtgttatgtataagcttcttgatgtagtttatgaaaaaacagtttatgaaggtacaattttcgttagtgagaa 38471776  T
Q  279 ct 280  Q
    ||    
T  38471775 ct 38471774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 166 - 242
Target Start/End: Complemental strand, 42839418 - 42839341
Alignment:
Q  166 ttggtttatt-ttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaa 242  Q
    |||||||||| || |||||| | | ||||||||| |||||||||||||||||||| |||||||| |||||||||||||    
T  42839418 ttggtttattattgagcttatgtagataaataagtttttatgtattattcataagtttgtcaagttagtttatgaaaa 42839341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 187 - 242
Target Start/End: Original strand, 8832464 - 8832522
Alignment:
Q  187 caaataaataagcttttatgtattatt---cataagcttgtcaaggtagtttatgaaaa 242  Q
    |||||||||||||||||||||||||||   ||||||||| |||||||||||||||||||    
T  8832464 caaataaataagcttttatgtattattaatcataagcttttcaaggtagtttatgaaaa 8832522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 9140806 - 9140735
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagat 258  Q
    |||||||||||| ||||||||||||| |||||| |||||||| |||||||||| ||||| |||| ||||||||    
T  9140806 gcaaataaataaccttttatgtatta-tcataaacttgtcaatgtagtttatgtaaaaacagtttatgaagat 9140735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 187 - 263
Target Start/End: Complemental strand, 43787879 - 43787803
Alignment:
Q  187 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    ||||||||||| |||||||||||||||||||| |||||  |||||| ||||||||||| |  | |||||||||||||    
T  43787879 caaataaataaacttttatgtattattcataaacttgtttaggtagcttatgaaaaaacaacttatgaagatacaat 43787803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 280
Target Start/End: Original strand, 4004823 - 4004922
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    |||| |||||||||||| |||||||||| ||||||||||||| | || |||||||||||||| | |  | |||||| |||||| || ||||| |||||||    
T  4004823 cttatgcaaataaataatcttttatgtactattcataagctttttaaagtagtttatgaaaatacaacttatgaagctacaattttcgttagtgagaact 4004922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 260
Target Start/End: Original strand, 32366154 - 32366232
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatac 260  Q
    |||| ||||||||||||| |||||||||||||| ||||| || | ||||||||||||||||||| |||| ||||| ||||    
T  32366154 cttatgcaaataaataagtttttatgtattatttataag-ttttaaaggtagtttatgaaaaaacagtttatgaatatac 32366232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 242
Target Start/End: Original strand, 39592271 - 39592314
Alignment:
Q  199 cttttatgtattattcataagcttgtcaaggtagtttatgaaaa 242  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  39592271 cttttatgcattattcataagcttgtcaaggtagtttatgaaaa 39592314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 186 - 280
Target Start/End: Complemental strand, 12683683 - 12683589
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    ||||||||||||| ||| |||||||||||||||||||||||  | | |||| ||||||| || | ||||||||||||| || ||||  |||||||    
T  12683683 gcaaataaataagttttaatgtattattcataagcttgtcagagaaatttacgaaaaaacagcttatgaagatacaattttggttactgagaact 12683589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 263
Target Start/End: Complemental strand, 29133744 - 29133667
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    |||||||||||| ||||||||||||||||||||| ||||||  || |||| || ||||| |||| || ||||||||||    
T  29133744 gcaaataaataatcttttatgtattattcataagtttgtcactgtggtttgtggaaaaacagtttataaagatacaat 29133667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 200 - 272
Target Start/End: Complemental strand, 8343062 - 8342991
Alignment:
Q  200 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 272  Q
    |||||||||||||| ||||||||||||| ||| |||||| ||||||| || ||||||||||||| || |||||    
T  8343062 ttttatgtattatt-ataagcttgtcaatgtattttatgcaaaaataatttatgaagatacaattttcgttag 8342991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 200 - 272
Target Start/End: Original strand, 12267020 - 12267092
Alignment:
Q  200 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 272  Q
    |||| ||||||||| ||||||||||| | ||||||||||||||||||| | ||||||||| ||| ||| ||||    
T  12267020 ttttttgtattatttataagcttgtcgatgtagtttatgaaaaaataggttatgaagatataatttttattag 12267092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 43796910 - 43796993
Alignment:
Q  158 cgtttgtattggtttatttta-agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 240  Q
    |||||| ||||| |||||||| |||||| | |||||||||||  || |||||||||| ||||| |||| |||||||||||||||    
T  43796910 cgtttggattggcttattttagagcttatgtaaataaataagtattaatgtattatttataagtttgttaaggtagtttatgaa 43796993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 27703542 - 27703500
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagct 221  Q
    |||||| |||||||||||||||||||| |||||||||||||||    
T  27703542 agcttatgcaaataaataagcttttatatattattcataagct 27703500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 37420040 - 37419987
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 240  Q
    |||||||||||||||||||||| | ||||||||  ||||||||||||||||||||    
T  37420040 gcaaataaataagcttttatgt-taattcataattttgtcaaggtagtttatgaa 37419987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 41554656 - 41554602
Alignment:
Q  187 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaa 241  Q
    ||||||||||| ||||||||||||||||||||  |||| || |||||||||||||    
T  41554656 caaataaataaacttttatgtattattcataaatttgttaaagtagtttatgaaa 41554602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 272
Target Start/End: Complemental strand, 2401705 - 2401613
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 272  Q
    |||||| |||||||||||   ||||||||||| || ||||| || | |||||||||||||||||||| | | ||||| ||||||| ||||||||    
T  2401705 agcttatgcaaataaatatatttttatgtattgtttataagttttt-aaggtagtttatgaaaaaatgggttatgaaaatacaatttttgttag 2401613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 244
Target Start/End: Original strand, 5516077 - 5516142
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||| | ||| |||||||||| ||||| ||||||||||| |||| || ||||||||||||||||    
T  5516077 agcttatgtaaaaaaataagcttctatgtgttattcataagtttgtaaatgtagtttatgaaaaaa 5516142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 156 - 232
Target Start/End: Original strand, 7028152 - 7028229
Alignment:
Q  156 cccgtttgtattggttta-ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtag 232  Q
    ||||||||||||| |||| |||| |||||| ||||||||| || ||||||| ||||| ||||||| ||||||| ||||    
T  7028152 cccgtttgtattgttttatttttgagcttatgcaaataaacaaacttttatatattactcataagtttgtcaatgtag 7028229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 240
Target Start/End: Original strand, 8441475 - 8441536
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 240  Q
    |||||| ||||||||||| | |||||||||||||| ||||| |||| || ||||||||||||    
T  8441475 agcttatgcaaataaatatgtttttatgtattatttataagtttgttaatgtagtttatgaa 8441536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 35731148 - 35731189
Alignment:
Q  187 caaataaataagcttttatgtattattcataagcttgtcaag 228  Q
    |||||||||||||||||||||||||||||| || ||||||||    
T  35731148 caaataaataagcttttatgtattattcatgagtttgtcaag 35731189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 240
Target Start/End: Original strand, 40301354 - 40301414
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 240  Q
    |||||| ||||||||||||| |||||||||||||| ||||| || | |||||||||||||||    
T  40301354 agcttatgcaaataaataagtttttatgtattatttataag-tttttaaggtagtttatgaa 40301414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 42382621 - 42382670
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagttt 235  Q
    ||||||||||||| || || |||||||||||||| |||||||||||||||    
T  42382621 gcaaataaataagtttgtacgtattattcataagtttgtcaaggtagttt 42382670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 232
Target Start/End: Original strand, 7041373 - 7041449
Alignment:
Q  157 ccgtttgtattggttta-ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtag 232  Q
    |||||||||||| |||| |||| |||||| ||||||||| || ||||||| ||||| ||||||| ||||||| ||||    
T  7041373 ccgtttgtattgttttatttttgagcttatgcaaataaacaaacttttatatattactcataagtttgtcaatgtag 7041449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 244
Target Start/End: Original strand, 15155824 - 15155880
Alignment:
Q  188 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    ||||||||| |||||||||||||||| |||| ||||| || | ||||||||||||||    
T  15155824 aaataaatatgcttttatgtattatttataatcttgttaatgaagtttatgaaaaaa 15155880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 259
Target Start/End: Original strand, 42064881 - 42064933
Alignment:
Q  207 tattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagata 259  Q
    |||||||||||||||||| |||||||||||| ||||||||  | |||||||||    
T  42064881 tattattcataagcttgttaaggtagtttataaaaaaataacttatgaagata 42064933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 242
Target Start/End: Original strand, 17531951 - 17532013
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaa 242  Q
    |||||| ||||||||||||| |||||||||||||  ||||| || | |||||||||||||||||    
T  17531951 agcttatgcaaataaataagtttttatgtattatctataag-tttttaaggtagtttatgaaaa 17532013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 338
Target Start/End: Complemental strand, 18276949 - 18276918
Alignment:
Q  307 atttatttgcataagctcaaaaataagtcaat 338  Q
    ||||||||||||||||||||||||||||||||    
T  18276949 atttatttgcataagctcaaaaataagtcaat 18276918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 186 - 249
Target Start/End: Complemental strand, 22422245 - 22422183
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagtt 249  Q
    ||||||||||||| |||||| ||||||| ||||| || | ||||||||||||||||||| ||||    
T  22422245 gcaaataaataagtttttatatattatttataag-tttttaaggtagtttatgaaaaaacagtt 22422183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 2757153 - 2757085
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagtt 249  Q
    |||||| ||||||||||||| |||||||||||||| ||||| || | ||| ||||||||||||||| ||||    
T  2757153 agcttatgcaaataaataag-ttttatgtattatttataagtttttaaag-tagtttatgaaaaaacagtt 2757085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 200 - 242
Target Start/End: Original strand, 17546414 - 17546456
Alignment:
Q  200 ttttatgtattattcataagcttgtcaaggtagtttatgaaaa 242  Q
    |||||||||||||| ||| |||||||||||||||||| |||||    
T  17546414 ttttatgtattatttataggcttgtcaaggtagtttacgaaaa 17546456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 187 - 272
Target Start/End: Complemental strand, 30995979 - 30995891
Alignment:
Q  187 caaataaataagcttttatgtattatt---cataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 272  Q
    ||||||||||| |||||||||||||||   |||||| |  ||||| |||||||||||||||||| | ||||| |||  || ||||||||    
T  30995979 caaataaataaacttttatgtattattattcataagttgatcaagatagtttatgaaaaaatagcttatgaatatatgatttttgttag 30995891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 337
Target Start/End: Complemental strand, 35997317 - 35997287
Alignment:
Q  307 atttatttgcataagctcaaaaataagtcaa 337  Q
    |||||||||||||||||||||||||||||||    
T  35997317 atttatttgcataagctcaaaaataagtcaa 35997287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 10574245 - 10574181
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||| ||||||| ||||| |||||| ||||||| ||||| || | |||||||||||||||||||    
T  10574245 agcttatgcaaatacataagtttttatctattatttataagttttt-aaggtagtttatgaaaaaa 10574181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 13097936 - 13097985
Alignment:
Q  196 aagcttttatgtattatt-cataagcttgtcaaggtagtttatgaaaaaa 244  Q
    ||||||| |||||||||| |||||||||||||| || |||||||||||||    
T  13097936 aagctttgatgtattatttcataagcttgtcaaagttgtttatgaaaaaa 13097985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 27881081 - 27881016
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||| ||||||||||| | | |||||||||||| ||||| || | ||||||| |||||||||||    
T  27881081 agcttatgcaaataaatatgttattatgtattatttataagtttattaaggtagcttatgaaaaaa 27881016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 37419913 - 37419950
Alignment:
Q  173 attttaagcttacgcaaataaataagcttttatgtatt 210  Q
    ||||| |||||| |||||||||||||||||||||||||    
T  37419913 attttgagcttatgcaaataaataagcttttatgtatt 37419950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 259
Target Start/End: Original strand, 1837002 - 1837082
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagata 259  Q
    |||||| |||||||||||||  ||||  ||||||||||||  |||| || |||| ||||| ||||||| || |||||||||    
T  1837002 agcttaagcaaataaataagtatttacatattattcataaatttgtaaatgtagcttatgcaaaaataattcatgaagata 1837082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 271
Target Start/End: Complemental strand, 16108178 - 16108114
Alignment:
Q  207 tattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgtta 271  Q
    ||||||| ||||| |||| ||||||||||||||||||| |  | ||||| ||||||| |||||||    
T  16108178 tattatttataagtttgttaaggtagtttatgaaaaaacaacttatgaatatacaatttttgtta 16108114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 225
Target Start/End: Complemental strand, 27243607 - 27243575
Alignment:
Q  193 aataagcttttatgtattattcataagcttgtc 225  Q
    |||||||||||| ||||||||||||||||||||    
T  27243607 aataagcttttacgtattattcataagcttgtc 27243575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 2e-28; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 157 - 280
Target Start/End: Original strand, 32975666 - 32975790
Alignment:
Q  157 ccgtttgtattggttta-ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaa 255  Q
    ||||||| ||| ||||| |||| |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |  | |||||    
T  32975666 ccgtttggatttgtttacttttgagcttatgcaaataaataagcttttatatattattcataagcttgtcaaggtagtttatgaaaacacaacttatgaa 32975765  T
Q  256 gatacaatctttgttagcgagaact 280  Q
    |||||||| |||||| | |||||||    
T  32975766 gatacaatttttgtttgtgagaact 32975790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 192 - 338
Target Start/End: Complemental strand, 35168512 - 35168368
Alignment:
Q  192 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaactgagaacttatg 291  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| || || ||  |||    ||||||||||    
T  35168512 aaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagtttatgaagatacaattttcgtcagttaga----agaacttatg 35168417  T
Q  292 aattaa--agaaaattaatttatttgcataagctcaaaaataagtcaat 338  Q
    ||||||    |||  | |||||||| |||||||||||||||||| ||||    
T  35168416 aattaacttaaaagctgatttatttacataagctcaaaaataagccaat 35168368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 28879036 - 28879122
Alignment:
Q  156 cccgtttgtattggtttatttta-agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaa 241  Q
    |||||||| ||||| |||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28879036 cccgtttgaattggcttatttttgagcttatgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaa 28879122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 38895661 - 38895754
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 272  Q
    |||||| ||||| |||||| ||||||| |||||||||||||||||| ||||||||||||||||||||| || ||||||||||||| ||||||||    
T  38895661 agcttatgcaaaaaaataaacttttatttattattcataagcttgttaaggtagtttatgaaaaaataatttatgaagatacaatatttgttag 38895754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 174 - 280
Target Start/End: Complemental strand, 34286652 - 34286547
Alignment:
Q  174 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagc 273  Q
    |||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||| || ||||| || | ||||||||||||| || |||||     
T  34286652 ttttgagcttatgtaaataaataagcttttatgtattattcataagcttgtcaaggtagtttgtg-aaaaacagcttatgaagatacaattttcgttagg 34286554  T
Q  274 gagaact 280  Q
    |||||||    
T  34286553 gagaact 34286547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 174 - 242
Target Start/End: Complemental strand, 32213111 - 32213043
Alignment:
Q  174 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaa 242  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  32213111 ttttaagcttatgcaaataaataagcttttatgtattattcataagcttgtcaggttagtttatgaaaa 32213043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 186 - 280
Target Start/End: Complemental strand, 10299003 - 10298909
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    |||||||||| | ||||| ||||| |||||||||||||||||||||||||||||||||| || | ||||||||||||| |||||||  |||||||    
T  10299003 gcaaataaattaacttttttgtatcattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgttaatgagaact 10298909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 174 - 244
Target Start/End: Original strand, 35453407 - 35453477
Alignment:
Q  174 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||| |||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  35453407 tttttagcttatgcaaataaataagcttttatgtattattcataagtttatcaaggtagtttatgaaaaaa 35453477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 179 - 280
Target Start/End: Original strand, 35285930 - 35286031
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaa 278  Q
    |||||| |||||||||||||||||| ||| ||||||||||||| ||||| ||||||||||||||||  | | ||||||||||||| |||  |||||||||    
T  35285930 agcttatgcaaataaataagcttttgtgtgttattcataagctcgtcaaagtagtttatgaaaaaaatgcttatgaagatacaatttttagtagcgagaa 35286029  T
Q  279 ct 280  Q
    ||    
T  35286030 ct 35286031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 179 - 280
Target Start/End: Complemental strand, 42363400 - 42363300
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaa 278  Q
    |||||| ||||||||||||| |||||||||||||| ||||| || | |||||||||||||||||||  ||| ||||||||||||| |||||||| |||||    
T  42363400 agcttatgcaaataaataagtttttatgtattatttataagttttt-aaggtagtttatgaaaaaaccgtttatgaagatacaatttttgttagtgagaa 42363302  T
Q  279 ct 280  Q
    ||    
T  42363301 ct 42363300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 166 - 272
Target Start/End: Complemental strand, 24350617 - 24350510
Alignment:
Q  166 ttggtttatttta-agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatc 264  Q
    ||||||||||||  || ||| |||||||| ||||||||||| ||||||||||||||||||||| ||| ||||||||||||||| | ||||||||| |||     
T  24350617 ttggtttattttttagtttatgcaaataattaagcttttatatattattcataagcttgtcaacgtaatttatgaaaaaatagcttatgaagatataatt 24350518  T
Q  265 tttgttag 272  Q
    || |||||    
T  24350517 ttcgttag 24350510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 160 - 244
Target Start/End: Original strand, 2669630 - 2669715
Alignment:
Q  160 tttgtattggtttatttta-agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||| |||||||||||||| |||||| ||||||||||||||| | |||||||||| ||||| |||| |||||||||||||||||||    
T  2669630 tttggattggtttattttatagcttatgcaaataaataagctctaatgtattatttataagtttgttaaggtagtttatgaaaaaa 2669715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 179 - 263
Target Start/End: Original strand, 42102109 - 42102192
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    |||||| ||||||||||||| |||||||||||||| ||||| || | |||||||||||||||||||  |||||||||||||||||    
T  42102109 agcttatgcaaataaataagtttttatgtattatttataagttttt-aaggtagtttatgaaaaaaccgttaatgaagatacaat 42102192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 179 - 272
Target Start/End: Complemental strand, 8216989 - 8216894
Alignment:
Q  179 agcttacgcaaataaataagctttt-atgtattattcataagcttgtc-aaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 272  Q
    |||||| |||||| ||||||||||| ||||||||||||||| |||||| |||||||||||||||||| ||| | ||||||||||||| || |||||    
T  8216989 agcttatgcaaattaataagctttttatgtattattcataatcttgtctaaggtagtttatgaaaaagtaggttatgaagatacaattttcgttag 8216894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 186 - 272
Target Start/End: Complemental strand, 16972434 - 16972347
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtc-aaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 272  Q
    |||||||||||||||| ||||||||||||||||| ||||| ||||||||| ||||||||| || | ||||||||||||| || |||||    
T  16972434 gcaaataaataagcttgtatgtattattcataagtttgtctaaggtagttcatgaaaaaacagcttatgaagatacaattttcgttag 16972347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 181 - 280
Target Start/End: Original strand, 19327871 - 19327969
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    |||| |||||||||||| ||||||||||||||||||||| |||| || |||||||||| ||||| |||| || |||||||||| |||||||  |||||||    
T  19327871 cttatgcaaataaataaacttttatgtattattcataagtttgt-aatgtagtttatggaaaaacagtttataaagatacaatttttgttaatgagaact 19327969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 13265493 - 13265547
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 240  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  13265493 gcaaataaataagcttttatgtattattcataagcttgtcaaagtagttcatgaa 13265547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 179 - 240
Target Start/End: Original strand, 32131442 - 32131503
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 240  Q
    |||||| ||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||    
T  32131442 agcttatgcaaataaataagcttttatgcattattcctaagtttgtcaaggtagtttatgaa 32131503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 187 - 280
Target Start/End: Complemental strand, 34102762 - 34102669
Alignment:
Q  187 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    |||||||||||||||||||||||||||||| || || | || |||||||||||||||  | ||||| || ||||||| |||||||| |||||||    
T  34102762 caaataaataagcttttatgtattattcatgagtttttaaatgtagtttatgaaaaatcaattaataaaaatacaatttttgttagagagaact 34102669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 1089022 - 1089080
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||| ||||||||||||    
T  1089022 gcaaataaataagttttaatgtattattcataagcttgtcaatgtactttatgaaaaaa 1089080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 272
Target Start/End: Complemental strand, 9131217 - 9131119
Alignment:
Q  174 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 272  Q
    |||| |||||| ||||||| |||||||||||||||||||| ||||||||||| |  |||||| |||| ||| || | ||||||||||||| || |||||    
T  9131217 ttttgagcttatgcaaatatataagcttttatgtattatttataagcttgtcgatttagtttctgaagaaacagcttatgaagatacaattttcgttag 9131119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 14942437 - 14942527
Alignment:
Q  190 ataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    |||||||||||||| ||||||||| |||||||||| ||| |||||||||||||||    | |||||||| |||| ||||||||| ||||||    
T  14942437 ataaataagcttttgtgtattatttataagcttgttaagttagtttatgaaaaaacgacttatgaagatgcaatttttgttagcaagaact 14942527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 179 - 277
Target Start/End: Original strand, 19925559 - 19925657
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 277  Q
    |||||| |||||||||||||||||||  ||||||| ||||| |||| |||||| |||| ||||||| | || ||||||||||||| || ||||| ||||    
T  19925559 agcttatgcaaataaataagcttttaattattatttataagtttgttaaggtattttacgaaaaaacaatttatgaagatacaattttcgttagtgaga 19925657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 186 - 263
Target Start/End: Original strand, 12607089 - 12607165
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    ||||||||||||| |||||||||||||| ||||| || | |||||||||||||||||||  ||| |||||||||||||    
T  12607089 gcaaataaataagtttttatgtattatttataag-tttttaaggtagtttatgaaaaaacggtttatgaagatacaat 12607165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 179 - 280
Target Start/End: Complemental strand, 38338934 - 38338834
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaa 278  Q
    |||||| ||||||||||||| |||||  ||||||| ||||| || | |||||||||||||||||||||||| |||||||||  || || ||||| |||||    
T  38338934 agcttatgcaaataaataagtttttaaatattatttataagttttt-aaggtagtttatgaaaaaatagtttatgaagatatgattttcgttagtgagaa 38338836  T
Q  279 ct 280  Q
    ||    
T  38338835 ct 38338834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 188 - 272
Target Start/End: Complemental strand, 37410987 - 37410904
Alignment:
Q  188 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 272  Q
    ||||||||||| |||||||||||||| ||||  || | ||||||||||||||||||| |||| ||||||||||||| || |||||    
T  37410987 aaataaataagtttttatgtattatttataatttttt-aaggtagtttatgaaaaaacagttcatgaagatacaattttcgttag 37410904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 173 - 244
Target Start/End: Complemental strand, 41145488 - 41145414
Alignment:
Q  173 attttaagcttacgcaaataaataagcttttatgtattatt---cataagcttgtcaaggtagtttatgaaaaaa 244  Q
    ||||| |||||| |||||||||||||||||||| |||||||   |||||| |||| |||||||||||||||||||    
T  41145488 attttgagcttatgcaaataaataagcttttatttattattattcataagtttgttaaggtagtttatgaaaaaa 41145414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 186 - 277
Target Start/End: Original strand, 11988206 - 11988296
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 277  Q
    ||||||||||||| |||||||||||||| ||||| || | ||||||||| |||||||||  ||| ||||||||||||| || ||||| ||||    
T  11988206 gcaaataaataagtttttatgtattatttataag-tttttaaggtagttcatgaaaaaaccgtttatgaagatacaattttcgttagtgaga 11988296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 186 - 280
Target Start/End: Original strand, 13131439 - 13131542
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtca---------aggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgag 276  Q
    |||||||||||||||||||||||||||||||||| ||||||         |||||||||||||||||| || | ||||| ||||||| |||||| | |||    
T  13131439 gcaaataaataagcttttatgtattattcataagtttgtcatgtcaaggtaggtagtttatgaaaaaacagcttatgaaaatacaatttttgtttgtgag 13131538  T
Q  277 aact 280  Q
    ||||    
T  13131539 aact 13131542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 14709613 - 14709555
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||| |||||||||||||| |||  |||||||||||||||||| |||||||||||||||    
T  14709613 gcaactaaataagcttttaagtacaattcataagcttgtcaagctagtttatgaaaaaa 14709555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 28280702 - 28280776
Alignment:
Q  171 ttatttta-agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||||| |||||| ||||||||||| || ||||||||||||| ||||| |||| || ||||||||||||||||    
T  28280702 ttattttagagcttatgcaaataaatatgcatttatgtattatttataagtttgttaatgtagtttatgaaaaaa 28280776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 2289970 - 2289905
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||| ||||||||||||| |||||| |||||| ||||||||||| ||| ||||||| |||||||    
T  2289970 agcttatgcaaataaataagtttttatttattatccataagcttgttaagatagtttaagaaaaaa 2289905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 29243147 - 29243083
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||| |||||||||||||||||||||||||||| ||||| || | |||||||||||| ||||||    
T  29243147 agcttatgcaaataaataagcttttatgtattatttataag-tttttaaggtagtttattaaaaaa 29243083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 244
Target Start/End: Complemental strand, 16706183 - 16706119
Alignment:
Q  180 gcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    ||||| ||||||||||| | |||||||||||||||||||| |||  || ||||||||||||||||    
T  16706183 gcttatgcaaataaatatgtttttatgtattattcataagtttgaaaatgtagtttatgaaaaaa 16706119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 24087189 - 24087237
Alignment:
Q  196 aagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||||||| ||||||||||||||||||| || |||||||||||||||    
T  24087189 aagcttttatatattattcataagcttgtcgagatagtttatgaaaaaa 24087237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 23412743 - 23412801
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    ||||||| |||||  |||||||||||||||||| ||||||||  |||||||||||||||    
T  23412743 gcaaatatataagtatttatgtattattcataaacttgtcaatatagtttatgaaaaaa 23412801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 271
Target Start/End: Original strand, 38195491 - 38195580
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgtta 271  Q
    |||| ||||||||||||| |||||| ||||||| ||||| || | ||||||||||| ||||||| |||| ||| | ||||||| |||||||    
T  38195491 cttatgcaaataaataagtttttatatattatttataag-tttttaaggtagtttacgaaaaaacagtttatggaaatacaatttttgtta 38195580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 245
Target Start/End: Complemental strand, 4326288 - 4326231
Alignment:
Q  188 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaat 245  Q
    |||||||||||  ||||||||||||||||||| || | || |||||||||||||||||    
T  4326288 aaataaataagtctttatgtattattcataagtttataaatgtagtttatgaaaaaat 4326231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 203 - 280
Target Start/End: Complemental strand, 24867011 - 24866934
Alignment:
Q  203 tatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    ||||||||||| ||||| |||| || |||||||||||||||| || | |||||| |||||| || |||| ||||||||    
T  24867011 tatgtattatttataagattgttaatgtagtttatgaaaaaacagcttatgaaggtacaattttcgttatcgagaact 24866934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 272
Target Start/End: Complemental strand, 218327 - 218245
Alignment:
Q  188 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 272  Q
    ||||||||||  |||||||||||||| ||||| || | |||||||||||||||||| || || ||||||||||||| || |||||    
T  218327 aaataaataaatttttatgtattatttataag-tttttaaggtagtttatgaaaaacta-tttatgaagatacaattttcgttag 218245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 272
Target Start/End: Complemental strand, 694887 - 694805
Alignment:
Q  188 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 272  Q
    ||||||||||  |||||||||||||| ||||| || | |||||||||||||||||| || || ||||||||||||| || |||||    
T  694887 aaataaataaatttttatgtattatttataag-tttttaaggtagtttatgaaaaacta-tttatgaagatacaattttcgttag 694805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 272
Target Start/End: Complemental strand, 699096 - 699014
Alignment:
Q  188 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 272  Q
    ||||||||||  |||||||||||||| ||||| || | |||||||||||||||||| || || ||||||||||||| || |||||    
T  699096 aaataaataaatttttatgtattatttataag-tttttaaggtagtttatgaaaaacta-tttatgaagatacaattttcgttag 699014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 272
Target Start/End: Complemental strand, 731950 - 731868
Alignment:
Q  188 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 272  Q
    ||||||||||  |||||||||||||| ||||| || | |||||||||||||||||| || || ||||||||||||| || |||||    
T  731950 aaataaataaatttttatgtattatttataag-tttttaaggtagtttatgaaaaacta-tttatgaagatacaattttcgttag 731868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 272
Target Start/End: Complemental strand, 855846 - 855764
Alignment:
Q  188 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 272  Q
    ||||||||||  |||||||||||||| ||||| || | |||||||||||||||||| || || ||||||||||||| || |||||    
T  855846 aaataaataaatttttatgtattatttataag-tttttaaggtagtttatgaaaaacta-tttatgaagatacaattttcgttag 855764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 1184763 - 1184843
Alignment:
Q  158 cgtttgtattggtttattttaa-gcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttat 237  Q
    |||||| ||||| ||||||||| ||||| |||||||||||||| || |||||| ||| | ||| |||| ||||||||||||    
T  1184763 cgtttgaattggcttattttaaagcttatgcaaataaataagcattaatgtatcatttaaaagtttgttaaggtagtttat 1184843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 14262330 - 14262421
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 272  Q
    |||| ||||||||| |||| || |||| ||||| ||||  |||| ||||||||||||||||||| |  | ||||| ||||||| ||||||||    
T  14262330 cttatgcaaataaagaagcattaatgtgttatttataaatttgttaaggtagtttatgaaaaaacaacttatgaatatacaatttttgttag 14262421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 244
Target Start/End: Complemental strand, 26047038 - 26046975
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||| ||||| || ||||||||||| ||||||| | ||||||||  ||||||||||||||||||    
T  26047038 cttatgcaaaaaagtaagcttttatttattattaacaagcttgttgaggtagtttatgaaaaaa 26046975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 29218329 - 29218255
Alignment:
Q  187 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttat--gaaaaaatagttaatgaagata 259  Q
    |||||| ||||| ||||||||||||||  |||| |||| |||||| |||||  |||||||||||| |||||||||    
T  29218329 caaatacataagtttttatgtattatttttaagtttgttaaggtattttataagaaaaaatagtttatgaagata 29218255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 280
Target Start/End: Original strand, 8752815 - 8752909
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    ||||| |||||||||||| |||||||||| || |  |||||| ||| |||||||||||| || | | ||||||||||  |||||| | |||||||    
T  8752815 gcaaagaaataagcttttgtgtattattcgtaggtgtgtcaaagtaatttatgaaaaaacagcttaagaagatacaaattttgtttgtgagaact 8752909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 402177 - 402124
Alignment:
Q  174 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaa 227  Q
    |||| |||| ||| ||||||||||| |||||||||||||| ||||| |||||||    
T  402177 tttttagctaacgtaaataaataagtttttatgtattatttataagtttgtcaa 402124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 32924296 - 32924231
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||| || |||||||| |||||||| | ||||| ||||||||||  | ||||||||||||||||    
T  32924296 agcttatgcgaataaatatgcttttatttgttatttataagcttgtttatgtagtttatgaaaaaa 32924231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 19925465 - 19925417
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtt 234  Q
    |||||||||||||| || |||||||||| |||| ||||| |||||||||    
T  19925465 gcaaataaataagcattaatgtattatttataaacttgttaaggtagtt 19925417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 179 - 280
Target Start/End: Original strand, 24747 - 24850
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtc--aaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgag 276  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| || |||| |||||||||| ||  |||| |||    
T  24747 agcttatgcaaataaataagcttttatgtattattcataagcttgtcaaaaggtagtttatgaaaaaacagctaatcaagatacaatattcattagtgag 24846  T
Q  277 aact 280  Q
    ||||    
T  24847 aact 24850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 2e-25; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 154 - 272
Target Start/End: Original strand, 29378621 - 29378740
Alignment:
Q  154 gacccgtttgtattggtttat-tttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaat 252  Q
    |||| ||||| ||||| |||| ||| |||||| |||||||||||||||||||||||||||| || || |||||||||||||||||||||||| || | ||    
T  29378621 gacctgtttggattggcttatctttgagcttatgcaaataaataagcttttatgtattatttatgagtttgtcaaggtagtttatgaaaaaacagcttat 29378720  T
Q  253 gaagatacaatctttgttag 272  Q
    ||||||||||| || |||||    
T  29378721 gaagatacaattttcgttag 29378740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 174 - 263
Target Start/End: Original strand, 47511040 - 47511129
Alignment:
Q  174 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||| || | |||||||||||||    
T  47511040 ttttgagcttatgcaaataaataagcttttatgtattattcataagcttgttaaggaagtctatgaaaaaacagcttatgaagatacaat 47511129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 181 - 260
Target Start/End: Original strand, 30181554 - 30181633
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatac 260  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| || | ||||||||||    
T  30181554 cttaggcaaataaagaagcttttatgtattattcataagcttgtcaaggtagtttatcaaaaaacagcttatgaagatac 30181633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 44613557 - 44613492
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  44613557 agcttatgcaaataaataagcttttatttattattcataagcttgttaaggtagtttatgaaaaaa 44613492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 186 - 280
Target Start/End: Complemental strand, 14691377 - 14691282
Alignment:
Q  186 gcaaataaataa-gcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||| | || ||||||||| ||| || ||||| |||||||    
T  14691377 gcaaataaataaagcttttatgtattattcataagcttgtcaatgtaatttatgaaaaaacaatttatgaagatataattttcgttagtgagaact 14691282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 34922935 - 34922998
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  34922935 cttatgcaaataaataagcttttatgtattattcataagtttgtcaaggtagtttataaaaaaa 34922998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 186 - 263
Target Start/End: Original strand, 20888582 - 20888660
Alignment:
Q  186 gcaaataaataagctttt-atgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    |||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||| | || |||||||||||||    
T  20888582 gcaaataaataagctttttatgtattattcataagcttgcaaaggtagtttatgaaaaaacaatttatgaagatacaat 20888660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 41037752 - 41037821
Alignment:
Q  176 ttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaata 246  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||    
T  41037752 ttaagcttatgcaaataaataagcttttatgtattattca-aagcttgtcaaggtaatttatgataaaata 41037821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 181 - 278
Target Start/End: Complemental strand, 29390632 - 29390536
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaa 278  Q
    |||| |||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||  | || ||||||||||||| || |||||| ||||    
T  29390632 cttatgcaaataaataatctttgatgtattattcataagcttgtaaaggtagtttatgaaaaacaactt-atgaagatacaattttcgttagctagaa 29390536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 179 - 280
Target Start/End: Original strand, 38372560 - 38372661
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaa 278  Q
    |||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||  || | | ||||| ||||| || ||||| |||||    
T  38372560 agcttatgcaaataaataagctcttatgtattattcataagtttgtcaaggtagtttacgaaaaagcagctcaagaagaaacaattttcgttagtgagaa 38372659  T
Q  279 ct 280  Q
    ||    
T  38372660 ct 38372661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 41094227 - 41094285
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||    
T  41094227 gcaaataaataagcctttatgtattactcataagcttgtcaaggtggtttatgaaaaaa 41094285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 186 - 263
Target Start/End: Complemental strand, 48021724 - 48021648
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    ||||||||||||||| |||| |||||||||||||||||| || ||||||||||| ||||||  |||||||||||||||    
T  48021724 gcaaataaataagctcttatttattattcataagcttgttaaagtagtttatga-aaaataactaatgaagatacaat 48021648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 181 - 280
Target Start/End: Original strand, 22032766 - 22032865
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    |||| ||||||||||| | |||||||||||||| |||||| ||| || |||||||||||||||| | || |||||| |||||| || ||||| |||||||    
T  22032766 cttatgcaaataaatatgtttttatgtattatttataagcatgttaatgtagtttatgaaaaaacaatttatgaaggtacaattttcgttagtgagaact 22032865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 22575590 - 22575681
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 272  Q
    |||| ||||||||||| | |||||||||||||| ||||| |||| ||| || |||||||||||| |||| ||||||||||||| || |||||    
T  22575590 cttatgcaaataaatacgtttttatgtattatttataagtttgttaagatattttatgaaaaaacagtttatgaagatacaattttcgttag 22575681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 188 - 279
Target Start/End: Complemental strand, 23356566 - 23356475
Alignment:
Q  188 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaac 279  Q
    |||||||||||  ||| ||||||||||| ||| ||||||||||| |||||||||||| |||| ||||| |||| || |||||||| ||||||    
T  23356566 aaataaataaggctttttgtattattcacaagtttgtcaaggtaatttatgaaaaaacagtttatgaaaatactatttttgttagtgagaac 23356475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 33288188 - 33288134
Alignment:
Q  174 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaag 228  Q
    |||| |||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  33288188 ttttgagcttatgcaaataaataagcttttatgtattattcattagcttgtcaag 33288134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 188 - 270
Target Start/End: Original strand, 43391732 - 43391814
Alignment:
Q  188 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgtt 270  Q
    |||||||||| ||| | | ||||||||||||| |||| ||||||||||||||||||||| || ||||||||| ||| ||||||    
T  43391732 aaataaataaacttatgtttattattcataagtttgttaaggtagtttatgaaaaaataatttatgaagatataatttttgtt 43391814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 7098176 - 7098119
Alignment:
Q  187 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||||||||| ||||||| |||||||||||| |||||||| |||||||||||||||    
T  7098176 caaataaataagattttatgaattattcataagtttgtcaagatagtttatgaaaaaa 7098119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 187 - 240
Target Start/End: Complemental strand, 40629492 - 40629440
Alignment:
Q  187 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 240  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  40629492 caaataaataaacttt-atgtattattcataagcttgtcaaggtagtttatgaa 40629440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 188 - 272
Target Start/End: Complemental strand, 19308566 - 19308482
Alignment:
Q  188 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 272  Q
    ||||||||||  ||| |||||||||||||||| |||| | |||||||||||||||| ||| | |||||||| |||| ||||||||    
T  19308566 aaataaataaaatttcatgtattattcataagtttgttagggtagtttatgaaaaattagcttatgaagatccaatttttgttag 19308482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 186 - 270
Target Start/End: Complemental strand, 23119997 - 23119913
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgtt 270  Q
    |||||||||||| |||| | |||||||||||||| ||||||| |||||||| |||| || ||||  |||||||||||| ||||||    
T  23119997 gcaaataaataatctttaaagtattattcataagtttgtcaatgtagtttaagaaataacagtttgtgaagatacaatttttgtt 23119913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 181 - 280
Target Start/End: Original strand, 41677378 - 41677478
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa-tagttaatgaagatacaatctttgttagcgagaac 279  Q
    |||| ||||||||||||  |||||||||||||||||||| ||||||| ||||||||| ||||||  || | ||||||||||||| || ||| | ||||||    
T  41677378 cttatgcaaataaataaatttttatgtattattcataagtttgtcaatgtagtttattaaaaaaccagattatgaagatacaattttagtttgtgagaac 41677477  T
Q  280 t 280  Q
    |    
T  41677478 t 41677478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 186 - 277
Target Start/End: Original strand, 48895305 - 48895401
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatg-----aaaaaatagttaatgaagatacaatctttgttagcgaga 277  Q
    |||||||||||||| || || |||||||||||||||| |||||||||||||||     |||||| |||| ||||||||||||| |||| ||| ||||    
T  48895305 gcaaataaataagcattcatatattattcataagcttatcaaggtagtttatgagacaaaaaaacagtttatgaagatacaatttttgatagtgaga 48895401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 200 - 259
Target Start/End: Original strand, 14536905 - 14536964
Alignment:
Q  200 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagata 259  Q
    |||||||||||||||||||| |||||||| ||||||||||||||| | || |||||||||    
T  14536905 ttttatgtattattcataagattgtcaagatagtttatgaaaaaacactttatgaagata 14536964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 35809094 - 35809157
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||| |||||||||||||| || |||||||||| |||||||||| || ||||||||||||||||    
T  35809094 cttatgcaaataaataagcattaatgtattatttataagcttgttaacgtagtttatgaaaaaa 35809157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 181 - 263
Target Start/End: Complemental strand, 14676041 - 14675960
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    |||| ||||||||||| |  ||||||||||||| ||||| || | ||||||||||||||||||| |||| |||||||||||||    
T  14676041 cttatgcaaataaataggtgtttatgtattatttataagttttt-aaggtagtttatgaaaaaacagtttatgaagatacaat 14675960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 186 - 280
Target Start/End: Complemental strand, 32917669 - 32917575
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    ||||||||||||| |||||||||| |||||||||||| |||  || ||||| ||||||| |  | ||||||||| ||| |||||||| |||||||    
T  32917669 gcaaataaataagtttttatgtatcattcataagcttatcatagtggtttacgaaaaaacaacttatgaagatataatttttgttagtgagaact 32917575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 37779362 - 37779303
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||| ||||||||||||||||||||      |||||||||||||||||||||||||||||||||    
T  37779362 agcttatgcaaataaataagcttttat------ttcataagcttgtcaaggtagtttatgaaaaaa 37779303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 31613741 - 31613684
Alignment:
Q  187 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||||||||  || |||||||||||||| |||||||||| ||||||||||||||||    
T  31613741 caaataaataaatttgtatgtattattcattagcttgtcaatgtagtttatgaaaaaa 31613684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 280
Target Start/End: Original strand, 46743959 - 46744056
Alignment:
Q  186 gcaaataaataagcttttatgtattatt----cataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    ||||||||||||| ||||||||||||||    |||||||||||| |||||||| ||||||||| ||   ||||||||||||| || ||||| |||||||    
T  46743959 gcaaataaataagattttatgtattatttatccataagcttgtc-aggtagttaatgaaaaaacagcatatgaagatacaattttcgttagtgagaact 46744056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 280
Target Start/End: Complemental strand, 47654498 - 47654397
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaa 278  Q
    |||||| | ||||||||| ||  | |||||||||  |||||||||| || |||||||||||||||| |||| |||||| |||||| || ||||| |||||    
T  47654498 agcttatgtaaataaatatgccctgatgtattatatataagcttgttaatgtagtttatgaaaaaacagtttatgaaggtacaattttcgttagtgagaa 47654399  T
Q  279 ct 280  Q
    ||    
T  47654398 ct 47654397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 244
Target Start/End: Original strand, 14593150 - 14593217
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcata--agcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||| ||||||||||||   |||||||||||||||||  |||||||||| ||||||||||||||||    
T  14593150 agcttatgcaaataaataaaagtttatgtattattcatataagcttgtcaaagtagtttatgaaaaaa 14593217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 263
Target Start/End: Complemental strand, 21027597 - 21027513
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    |||||| | ||| ||||||| |||||||||||||| ||||| || | ||||| ||||||||||||| ||||  ||||||||||||    
T  21027597 agcttatgtaaacaaataagtttttatgtattatttataagtttattaaggtggtttatgaaaaaacagtttttgaagatacaat 21027513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 41094144 - 41094204
Alignment:
Q  174 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtt 234  Q
    |||| |||||| |||||||||||| ||| ||||||||||||||||||||| ||| ||||||    
T  41094144 tttttagcttatgcaaataaataaacttctatgtattattcataagcttgccaatgtagtt 41094204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 263
Target Start/End: Complemental strand, 6406939 - 6406872
Alignment:
Q  196 aagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    ||||||||||| |||||||  | |||||||||||||||||||||||||| || | |||||||| ||||    
T  6406939 aagcttttatgcattattctaaggcttgtcaaggtagtttatgaaaaaacagcttatgaagatgcaat 6406872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 16958820 - 16958910
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 272  Q
    |||| |||| |||||||  |||||||||||||| ||||| || | |||||||||||||||||||  ||| ||||||||||||| || |||||    
T  16958820 cttatgcaactaaataaatttttatgtattatttataagttttt-aaggtagtttatgaaaaaaccgtttatgaagatacaattttcgttag 16958910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 188 - 259
Target Start/End: Complemental strand, 18855345 - 18855274
Alignment:
Q  188 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagata 259  Q
    |||||||| ||||||| |||| |||  ||||||||||||| |||||||||| |||||||| | |||||||||    
T  18855345 aaataaatgagcttttttgtaatatgtataagcttgtcaatgtagtttatggaaaaatagattatgaagata 18855274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 186 - 277
Target Start/End: Original strand, 44799413 - 44799502
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 277  Q
    ||||||||||||| |||||| ||||||| ||||| || | |||||||||| ||||||||||||| ||||||||| ||| || ||||| ||||    
T  44799413 gcaaataaataagtttttat-tattatttataagttttt-aaggtagtttttgaaaaaatagtttatgaagatagaatattcgttagtgaga 44799502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 244
Target Start/End: Complemental strand, 1054157 - 1054087
Alignment:
Q  174 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||| |||||| |||||||||||||||||||||||||||||| ||   | |||| ||||||||| ||||||    
T  1054157 ttttgagcttatgcaaataaataagcttttatgtattattcaaaaaaatttcaatgtagtttataaaaaaa 1054087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 18837231 - 18837289
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||||||||||||| | |||||||||||||||||||| |||||| || || ||||||    
T  18837231 gcaaataaataagcttatgtgtattattcataagcttgtaaaggtacttaataaaaaaa 18837289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 246
Target Start/End: Complemental strand, 28759903 - 28759857
Alignment:
Q  200 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaata 246  Q
    |||||| |||||||||||||||||| |||||||||||| ||||||||    
T  28759903 ttttatttattattcataagcttgttaaggtagtttataaaaaaata 28759857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 263
Target Start/End: Complemental strand, 23137238 - 23137163
Alignment:
Q  187 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    |||| ||||||  |||||||||||||| ||||| || | ||||||||||||| |||||| ||| |||||||||||||    
T  23137238 caaacaaataaatttttatgtattatttataagttttt-aaggtagtttatgtaaaaatcgtttatgaagatacaat 23137163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 244
Target Start/End: Original strand, 24414534 - 24414590
Alignment:
Q  188 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||||||| | |||||||||||| ||||||||||||||| ||| |||| ||||||    
T  24414534 aaataaataaacatttatgtattatccataagcttgtcaagatagcttataaaaaaa 24414590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 16933011 - 16932921
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 272  Q
    |||| |||| |||||||  |||||||||||||| ||||| || | |||||||||||||||||||   || ||||||||||||| || |||||    
T  16933011 cttatgcaactaaataaatttttatgtattatttataagttttt-aaggtagtttatgaaaaaaccatttatgaagatacaattttcgttag 16932921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 16938394 - 16938304
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 272  Q
    |||| |||| |||||||  |||||||||||||| ||||| || | |||||||||||||||||||   || ||||||||||||| || |||||    
T  16938394 cttatgcaactaaataaatttttatgtattatttataagttttt-aaggtagtttatgaaaaaaccatttatgaagatacaattttcgttag 16938304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 28004586 - 28004668
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaa 262  Q
    |||||| ||||||||||||| |||||||||||||| ||||  || | || ||||||||||||||||   || ||||||||||||    
T  28004586 agcttatgcaaataaataagtttttatgtattatttataatttttttaa-gtagtttatgaaaaaaccatttatgaagatacaa 28004668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 35246676 - 35246738
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||| ||||||||||||| |||||||||||||| | ||| || | |||||||||||||||||||    
T  35246676 cttatgcaaataaataagtttttatgtattatttaaaag-tttttaaggtagtttatgaaaaaa 35246738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 186 - 272
Target Start/End: Original strand, 48949729 - 48949815
Alignment:
Q  186 gcaaataaataagcttttatgta-ttattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 272  Q
    |||||||||| || ||||||||| ||||| ||||| || | ||||||||||||||||||| |||| ||||||||| ||| || |||||    
T  48949729 gcaaataaatgagtttttatgtaattatttataagttttt-aaggtagtttatgaaaaaacagtttatgaagatataatattcgttag 48949815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 200 - 243
Target Start/End: Complemental strand, 49104444 - 49104401
Alignment:
Q  200 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaa 243  Q
    |||||||||||||||||||| || ||||||| ||||||||||||    
T  49104444 ttttatgtattattcataagtttatcaaggtggtttatgaaaaa 49104401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 21249160 - 21249198
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataag 219  Q
    |||| ||||||||||||| ||||||||||||||||||||    
T  21249160 cttatgcaaataaataagtttttatgtattattcataag 21249198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 338
Target Start/End: Complemental strand, 29778476 - 29778438
Alignment:
Q  300 aaaattaatttatttgcataagctcaaaaataagtcaat 338  Q
    |||||| ||||||||||||||||| ||||||||||||||    
T  29778476 aaaatttatttatttgcataagctaaaaaataagtcaat 29778438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 199 - 280
Target Start/End: Complemental strand, 37465951 - 37465869
Alignment:
Q  199 cttttatgtattattcataagcttgtcaaggtagtttat-gaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    ||||||| |||||||||||| ||||| ||| |||||||| ||||||| |  | || |||||||||| |||||| |||||||||    
T  37465951 cttttatttattattcataaacttgttaagatagtttatagaaaaaacaacttattaagatacaatatttgttggcgagaact 37465869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 246
Target Start/End: Complemental strand, 42083492 - 42083434
Alignment:
Q  188 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaata 246  Q
    ||||||||||| |||||||||||||||||||| |||| ||  || |||||| |||||||    
T  42083492 aaataaataagtttttatgtattattcataagtttgtaaatataatttatggaaaaata 42083434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 47648547 - 47648605
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||||||||| ||||||| |||||||||  | ||||| ||| |||||||||||||||    
T  47648547 gcaaataaataaacttttatttattattcacgaacttgttaagatagtttatgaaaaaa 47648605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 240
Target Start/End: Complemental strand, 24371490 - 24371430
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 240  Q
    |||||| ||||||||||||| ||| |||||||||| ||||| || | |||||||||||||||    
T  24371490 agcttatgcaaataaataagttttaatgtattatttataag-tttttaaggtagtttatgaa 24371430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 337
Target Start/End: Original strand, 24414623 - 24414676
Alignment:
Q  284 aacttatgaattaaagaaaattaatttatttgcataagctcaaaaataagtcaa 337  Q
    |||||||||||| |  |||| | ||||||||||||||||||||| |||||||||    
T  24414623 aacttatgaattgacaaaaaattatttatttgcataagctcaaacataagtcaa 24414676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 240
Target Start/End: Original strand, 25536280 - 25536340
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 240  Q
    |||||||| ||||||||||| |||||||||||||| ||||  || | |||||||||||||||    
T  25536280 agcttacgtaaataaataagtttttatgtattatttataa-atttttaaggtagtttatgaa 25536340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 240
Target Start/End: Original strand, 26331813 - 26331874
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 240  Q
    |||||| | |||||||||||||||| || |||  || ||||||||| |||||||||||||||    
T  26331813 agcttatgtaaataaataagcttttctgcattgatcgtaagcttgttaaggtagtttatgaa 26331874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 34927147 - 34927204
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaa 243  Q
    |||||||||||| ||| | |||||||||||||| |||||||||| | || ||||||||    
T  34927147 gcaaataaataaacttatctgtattattcataaacttgtcaaggcaattcatgaaaaa 34927204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 263
Target Start/End: Original strand, 39279458 - 39279515
Alignment:
Q  206 gtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    ||||||||||||||||||| ||||| ||||||||||||  || | | |||||||||||    
T  39279458 gtattattcataagcttgttaaggtggtttatgaaaaatcagcttaggaagatacaat 39279515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 181 - 261
Target Start/End: Original strand, 991504 - 991583
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagataca 261  Q
    |||| ||| ||||||||| ||||||| |||||| ||||| || | |||||||||||||||||||   || |||||||||||    
T  991504 cttatgcacataaataagtttttatgcattatttataagttttt-aaggtagtttatgaaaaaaccatttatgaagataca 991583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 214
Target Start/End: Original strand, 17944524 - 17944564
Alignment:
Q  174 ttttaagcttacgcaaataaataagcttttatgtattattc 214  Q
    |||| |||||| |||||||||||||||||||| ||||||||    
T  17944524 ttttgagcttatgcaaataaataagcttttatatattattc 17944564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 17944686 - 17944738
Alignment:
Q  210 tattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaa 262  Q
    ||||||||||||||||||||||||||||  ||||| |  | ||||||||||||    
T  17944686 tattcataagcttgtcaaggtagtttatagaaaaacaacttatgaagatacaa 17944738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 268
Target Start/End: Original strand, 39803035 - 39803115
Alignment:
Q  188 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttg 268  Q
    |||||||| ||||||| | |||| || ||||| |||||||  | |||||||||||||||  | ||||||||||||| ||||    
T  39803035 aaataaatgagcttttttctattgtttataagtttgtcaacattgtttatgaaaaaataagttatgaagatacaatttttg 39803115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 3e-24; HSPs: 55)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 180 - 297
Target Start/End: Original strand, 7267778 - 7267895
Alignment:
Q  180 gcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaac 279  Q
    ||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |  | |||||| |||||| || | | | |||||     
T  7267778 gcttatgcaaacaaataagcttttatgtattattcataagcttgccaaggtagtttatgaaaaaacaacttatgaaggtacaattttcgctggtgagaag 7267877  T
Q  280 tgagaacttatgaattaa 297  Q
    |||||||||| |||||||    
T  7267878 tgagaacttacgaattaa 7267895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 174 - 263
Target Start/End: Complemental strand, 21025316 - 21025227
Alignment:
Q  174 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    |||| |||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||   |||||||||||||    
T  21025316 tttttagcttatgcaaataaataagcttttatgtattatgcataagcttgttaaggtagtttatgaaaaaagagcctatgaagatacaat 21025227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 186 - 263
Target Start/End: Original strand, 24625860 - 24625937
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||| | |||||||||||||    
T  24625860 gcaaataaatacgcttttatgtattattcataagcttgttaaggtagtttatgaaaaattagcttatgaagatacaat 24625937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 171 - 246
Target Start/End: Original strand, 10054375 - 10054450
Alignment:
Q  171 ttattttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaata 246  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||    
T  10054375 ttattttgagcttatgcaaataaataagcttttatgtattattcataagtttgtaaatgtagtttatgaaaaaata 10054450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 174 - 244
Target Start/End: Complemental strand, 2034318 - 2034248
Alignment:
Q  174 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||| |||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  2034318 ttttgagcttatgcaaataaataagcttttatgtattatttataagtttgtcaaggtagtttatgaaaaaa 2034248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 181 - 279
Target Start/End: Original strand, 2255738 - 2255836
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaac 279  Q
    |||| |||||||||| ||||||||||||| |||||||||||||| |||||| |||||||||||| || | ||||||||||||| |||| ||| ||||||    
T  2255738 cttatgcaaataaatgagcttttatgtatgattcataagcttgttaaggtaatttatgaaaaaacagcttatgaagatacaatttttggtagtgagaac 2255836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 174 - 247
Target Start/End: Complemental strand, 10755369 - 10755296
Alignment:
Q  174 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatag 247  Q
    |||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||    
T  10755369 tttttagcttatgcaaataaataagcttttacgtattattcataagcttgtcaaggtaacttatgaaaaaatag 10755296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 179 - 297
Target Start/End: Complemental strand, 3211085 - 3210962
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa-----aaaatagttaatgaagatacaatctttgttagc 273  Q
    |||||| |||||||||||||||||||||||||| | ||||||||||||| ||||||||||||     |||| || | ||||||||||||| ||  |||      
T  3211085 agcttatgcaaataaataagcttttatgtattactgataagcttgtcaatgtagtttatgaagaaaaaaaacagcttatgaagatacaattttcattaat 3210986  T
Q  274 gagaactgagaacttatgaattaa 297  Q
    |||| |||||||||||||||||||    
T  3210985 gagagctgagaacttatgaattaa 3210962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 179 - 282
Target Start/End: Original strand, 8014790 - 8014893
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaa 278  Q
    |||||| |||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||  |   ||||||||||||| || ||||| || ||    
T  8014790 agcttatgcaaataagtaagcttttattcattattcataagcttgtcaaggtagtttatgaaaaaactgcatatgaagatacaattttggttagtgaaaa 8014889  T
Q  279 ctga 282  Q
    ||||    
T  8014890 ctga 8014893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 1240687 - 1240630
Alignment:
Q  187 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  1240687 caaataaataagcttttatgtattattcataagcttgtcaaggtaatttacgaaaaaa 1240630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 179 - 272
Target Start/End: Complemental strand, 2027260 - 2027167
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 272  Q
    |||||| ||||||||||||||||||||| |||||||| ||| ||||||||  |||||||||||||| || | ||||||||||||  ||||||||    
T  2027260 agcttatgcaaataaataagcttttatgcattattcagaagtttgtcaagacagtttatgaaaaaacagcttatgaagatacaacttttgttag 2027167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 179 - 243
Target Start/End: Original strand, 30533982 - 30534046
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaa 243  Q
    |||||| |||||||||||||||||||||||||||||||||| |||| || |||||||||||||||    
T  30533982 agcttatgcaaataaataagcttttatgtattattcataagtttgtaaatgtagtttatgaaaaa 30534046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 6776810 - 6776893
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaa 262  Q
    |||||| |||||||||||||||||||| || ||| ||||||||||| ||||||||||||| |||||||  | ||||||||||||    
T  6776810 agcttatgcaaataaataagcttttatttaatatccataagcttgttaaggtagtttatggaaaaataacttatgaagatacaa 6776893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 181 - 280
Target Start/End: Complemental strand, 32675971 - 32675872
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    |||| |||||||||||||||||||| ||||||||||||||||   ||||| |||||||||||||||  | ||||||||||||| ||  |||| |||||||    
T  32675971 cttatgcaaataaataagcttttatttattattcataagcttcgtaaggttgtttatgaaaaaataacttatgaagatacaattttcattagtgagaact 32675872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 179 - 244
Target Start/End: Original strand, 9894768 - 9894833
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    ||||||||||||||||||| ||||||||||||||| ||||| |||| |||||| ||||||||||||    
T  9894768 agcttacgcaaataaataatcttttatgtattatttataagtttgttaaggtattttatgaaaaaa 9894833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 181 - 280
Target Start/End: Original strand, 6758631 - 6758730
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    |||| |||||||||||||||||| | |||||| ||||||||||| |||||||||||||||||| ||  | || |||||||||  || ||||| |||||||    
T  6758631 cttatgcaaataaataagcttttgtttattatccataagcttgttaaggtagtttatgaaaaattaacttatcaagatacaaatttcgttagtgagaact 6758730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 179 - 336
Target Start/End: Original strand, 10873988 - 10874138
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgagaa 278  Q
    |||||| ||| ||||||||||||||||  |||||| |||||||||| |||||||||||||| |||| || | ||||||||||||| || ||| |          
T  10873988 agcttatgcatataaataagcttttat--attattaataagcttgttaaggtagtttatgagaaaacagcttatgaagatacaattttagttgg------ 10874079  T
Q  279 ctgagaacttatgaattaa-agaaaa-ttaatttatttgcataagctcaaaaataagtca 336  Q
     ||| |||||||||||||| | ||||  | ||||||||||||||||| ||||||||||||    
T  10874080 -tgaaaacttatgaattaacataaaagcttatttatttgcataagctaaaaaataagtca 10874138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 12817174 - 12817116
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatga 239  Q
    |||| ||||||||||||||||| |||||||||||||||||| ||||| |||||||||||    
T  12817174 cttatgcaaataaataagctttaatgtattattcataagctagtcaatgtagtttatga 12817116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 179 - 241
Target Start/End: Complemental strand, 21891422 - 21891360
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaa 241  Q
    |||||| ||||||||||||| ||| || ||||||||||||||||||||| |||||||||||||    
T  21891422 agcttatgcaaataaataagttttgatatattattcataagcttgtcaatgtagtttatgaaa 21891360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 171 - 263
Target Start/End: Original strand, 29052326 - 29052419
Alignment:
Q  171 ttatttta-agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    |||||||| ||||||  |||| |||||| ||||||||||||||| ||||| |||| |||||| |||||||||||| |||| |||| ||||||||    
T  29052326 ttattttagagcttatacaaaaaaataaacttttatgtattatttataagtttgttaaggtattttatgaaaaaacagtttatgatgatacaat 29052419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 6632663 - 6632726
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||| ||||||||||| |||||||||||||||| |||| ||||| || ||||||||||||||||    
T  6632663 cttatgcaaataaatatgcttttatgtattatttataaacttgttaatgtagtttatgaaaaaa 6632726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 25430839 - 25430785
Alignment:
Q  187 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    ||||||||||||| ||||||||||   |||||||||||||||||||||||||||||||    
T  25430839 caaataaataagcatttatgtatt---cataagcttgtcaaggtagtttatgaaaaaa 25430785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 196 - 259
Target Start/End: Original strand, 34509931 - 34509994
Alignment:
Q  196 aagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagata 259  Q
    |||||||||||||||||||||||| ||||||| | ||||||||| |||| |||| |||||||||    
T  34509931 aagcttttatgtattattcataagtttgtcaatggagtttatgataaaagagtttatgaagata 34509994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 179 - 280
Target Start/End: Original strand, 10687309 - 10687413
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtatt---attcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcga 275  Q
    |||||| ||||||||||||||||| |||||||   |||||||||| | | ||||||||||||| ||||| |  | ||| ||||||||| || ||||||||    
T  10687309 agcttatgcaaataaataagctttgatgtatttttattcataagcctattaaggtagtttatgtaaaaacaacttatggagatacaattttcgttagcga 10687408  T
Q  276 gaact 280  Q
    |||||    
T  10687409 gaact 10687413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 4808574 - 4808666
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 272  Q
    |||||| |||||||||| || ||| |||||||||| ||||| || | ||| ||||||||||||||| |||| ||||||||||||| || |||||    
T  4808574 agcttatgcaaataaatgagttttcatgtattatttataagttttt-aagatagtttatgaaaaaacagtttatgaagatacaatattcgttag 4808666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 263
Target Start/End: Original strand, 13429488 - 13429541
Alignment:
Q  210 tattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    |||||||||||||||||| |||||||||||||||| |||| |||| ||||||||    
T  13429488 tattcataagcttgtcaaagtagtttatgaaaaaacagtttatgaggatacaat 13429541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 272
Target Start/End: Complemental strand, 21610133 - 21610040
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 272  Q
    |||||| |||||||||||    |||||| |||||| |||||||||| || ||||||||||||||||||||| ||||| ||| ||| || |||||    
T  21610133 agcttatgcaaataaatatttctttatgaattatttataagcttgttaatgtagtttatgaaaaaatagtttatgaatatataattttcgttag 21610040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 277
Target Start/End: Complemental strand, 32165335 - 32165247
Alignment:
Q  188 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 277  Q
    ||||||||||| |||||||||||||| ||||  || | ||| ||||||||||||||| |||| ||||||||||||| || ||||| ||||    
T  32165335 aaataaataagtttttatgtattatttataattttttaaag-tagtttatgaaaaaacagtttatgaagatacaattttcgttagtgaga 32165247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 188 - 240
Target Start/End: Complemental strand, 2040261 - 2040209
Alignment:
Q  188 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 240  Q
    |||||||||||||||||| ||||||||||||| |||| |||||| ||||||||    
T  2040261 aaataaataagcttttatttattattcataagtttgttaaggtaatttatgaa 2040209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 187 - 243
Target Start/End: Original strand, 23239257 - 23239313
Alignment:
Q  187 caaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaa 243  Q
    ||||||||||||||||||| |||||||||||||||||| || || |||||| |||||    
T  23239257 caaataaataagcttttatttattattcataagcttgttaacgtggtttatcaaaaa 23239313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 200 - 259
Target Start/End: Original strand, 16589774 - 16589833
Alignment:
Q  200 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagata 259  Q
    |||||||||||||||||||| ||||||| | |||||||||||||| | || |||||||||    
T  16589774 ttttatgtattattcataagtttgtcaaaggagtttatgaaaaaacaatttatgaagata 16589833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 200 - 259
Target Start/End: Complemental strand, 16605606 - 16605547
Alignment:
Q  200 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagata 259  Q
    |||||||||||||||||||| ||||||| | |||||||||||||| | || |||||||||    
T  16605606 ttttatgtattattcataagtttgtcaaaggagtttatgaaaaaacaatttatgaagata 16605547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 272
Target Start/End: Complemental strand, 9202493 - 9202390
Alignment:
Q  173 attttaagcttacgcaaataaataagcttttatgtattattcataagcttg----tcaaggtagtttatgaaaaaatagttaatgaagatacaatctttg 268  Q
    ||||| |||||| |||||| |||||||||||  ||||||| ||||||||||    |||||| |||||||||||||| ||   ||||||||||||| |||     
T  9202493 attttgagcttatgcaaatgaataagcttttccgtattatacataagcttgtaactcaaggcagtttatgaaaaaacagcatatgaagatacaattttta 9202394  T
Q  269 ttag 272  Q
    ||||    
T  9202393 ttag 9202390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 21871365 - 21871308
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatga 239  Q
    |||| |||||||| ||| ||||||||||||||| |||| ||||||||||||||||||||    
T  21871365 cttatgcaaataagtaaacttttatgtattattgataa-cttgtcaaggtagtttatga 21871308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 277
Target Start/End: Complemental strand, 32615498 - 32615401
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 277  Q
    |||||| ||||||||||||| |||||||||||||| ||||  || | ||||||||| |||||||||   || ||||||||||||| || ||||| ||||    
T  32615498 agcttatgcaaataaataagtttttatgtattatttataa-atttttaaggtagttgatgaaaaaactatttatgaagatacaattttcgttagtgaga 32615401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 272
Target Start/End: Complemental strand, 10184413 - 10184321
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 272  Q
    |||||| | ||||||||||| |||||| ||||||| ||||| || | ||||||||||||||||||| | || ||||||| ||||| || |||||    
T  10184413 agcttatgtaaataaataagtttttatctattatttataagttttt-aaggtagtttatgaaaaaacaatttatgaagaaacaattttcgttag 10184321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 272
Target Start/End: Original strand, 17914948 - 17915040
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttag 272  Q
    |||||| |||||||||||   |||||||||||||| ||||| || | |||||||||||||||||||| | | ||||| ||||||| || |||||    
T  17914948 agcttatgcaaataaatacatttttatgtattatttataagttttt-aaggtagtttatgaaaaaatgggttatgaaaatacaattttcgttag 17915040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 244
Target Start/End: Complemental strand, 34801141 - 34801069
Alignment:
Q  171 ttattttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    ||||||| |||||| | |||||||||| ||||||| ||||||||||||| |||  ||| |||||||||||||||    
T  34801141 ttattttgagcttatgtaaataaataaacttttatttattattcataag-ttggtaagatagtttatgaaaaaa 34801069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 243
Target Start/End: Original strand, 1468178 - 1468241
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaa 243  Q
    |||||| ||||||||||||| |||||||||||||| || || || | ||||||||||||||||||    
T  1468178 agcttatgcaaataaataagtttttatgtattatttat-aggtttttaaggtagtttatgaaaaa 1468241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 244
Target Start/End: Complemental strand, 8011121 - 8011065
Alignment:
Q  188 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||||||||| || || ||||||| ||||| ||||||||||||||| ||||||||    
T  8011121 aaataaataagcattaatatattatttataagtttgtcaaggtagtttttgaaaaaa 8011065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 271
Target Start/End: Complemental strand, 3830002 - 3829911
Alignment:
Q  180 gcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgtta 271  Q
    ||||| ||||||||||| |||||||| | ||||||||||  || | | ||||||||||||||||| |  | ||||||||| ||| |||||||    
T  3830002 gcttatgcaaataaatacgcttttatttgttattcataaagtttttatggtagtttatgaaaaaacaacttatgaagataaaatttttgtta 3829911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 7446934 - 7446855
Alignment:
Q  191 taaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgtt 270  Q
    |||||||||||| |||||| |||||||||| ||| ||||| |||||| ||| || |  | ||||||||||||| ||||||    
T  7446934 taaataagctttaatgtatcattcataagcctgttaaggttgtttataaaacaacaacttatgaagatacaatttttgtt 7446855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 9201815 - 9201768
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtca 226  Q
    |||||| |||||| ||||||||||  ||||||||||||||||||||||    
T  9201815 agcttatgcaaatgaataagctttgctgtattattcataagcttgtca 9201768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 200 - 271
Target Start/End: Complemental strand, 18078309 - 18078238
Alignment:
Q  200 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgtta 271  Q
    |||||| |||| |||||||| ||||||| ||| |||||||||||| |||| || |||||| ||| |||||||    
T  18078309 ttttatttatttttcataagtttgtcaatgtattttatgaaaaaacagtttataaagatataatttttgtta 18078238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 244
Target Start/End: Complemental strand, 29623559 - 29623496
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||| |||||||||||| ||||||| ||||||| || || |||| || ||||||||||||||||    
T  29623559 cttatgcaaataaataaccttttatttattatttatgagtttgttaatgtagtttatgaaaaaa 29623496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 272
Target Start/End: Complemental strand, 715940 - 715902
Alignment:
Q  234 ttatgaaaaaatagttaatgaagatacaatctttgttag 272  Q
    |||||||||||||||| ||||||||||||| ||||||||    
T  715940 ttatgaaaaaatagtttatgaagatacaatttttgttag 715902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 263
Target Start/End: Complemental strand, 991360 - 991282
Alignment:
Q  186 gcaaataaataagcttttatgtattattc-ataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    |||| |||||||||||||||||| ||||  ||||| ||||||||  |||||||| ||||| | || |||||||||||||    
T  991360 gcaagtaaataagcttttatgtaatattagataagtttgtcaagtcagtttatggaaaaacaattgatgaagatacaat 991282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 249
Target Start/End: Complemental strand, 5958404 - 5958355
Alignment:
Q  200 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagtt 249  Q
    |||||||||||||| ||| | ||||| | |||||||||||||||||||||    
T  5958404 ttttatgtattatttatatgtttgtcgatgtagtttatgaaaaaatagtt 5958355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 6958649 - 6958690
Alignment:
Q  202 ttatgtattattcataagcttgtcaaggtagtttatgaaaaa 243  Q
    |||||||| |||||||||||| |||||||||||| |||||||    
T  6958649 ttatgtatcattcataagcttctcaaggtagtttgtgaaaaa 6958690  T

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Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 244
Target Start/End: Original strand, 34413322 - 34413386
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||| | ||||||||| | |||||||||||||| ||||| |||| || ||||||||||||||||    
T  34413322 agcttaggaaaataaata-gattttatgtattatttataagtttgtaaatgtagtttatgaaaaaa 34413386  T

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Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 240
Target Start/End: Complemental strand, 35111419 - 35111358
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 240  Q
    |||||| ||||||||| ||||||||| ||| ||||||||||| | ||||| ||||| |||||    
T  35111419 agcttatgcaaataaacaagcttttaagtaatattcataagcatatcaagttagttaatgaa 35111358  T

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Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 240
Target Start/End: Complemental strand, 716000 - 715948
Alignment:
Q  188 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 240  Q
    ||||||||||| || ||||||||||| |||| ||||| ||||| |||||||||    
T  716000 aaataaataagtttctatgtattatttataaacttgtaaaggtggtttatgaa 715948  T

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Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 1172349 - 1172381
Alignment:
Q  190 ataaataagcttttatgtattattcataagctt 222  Q
    |||||| ||||||||||||||||||||||||||    
T  1172349 ataaatgagcttttatgtattattcataagctt 1172381  T

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Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 201 - 249
Target Start/End: Complemental strand, 10730303 - 10730255
Alignment:
Q  201 tttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagtt 249  Q
    ||||||||||||| |||| ||||| || |||||||||||||||| ||||    
T  10730303 tttatgtattatttataaacttgttaatgtagtttatgaaaaaacagtt 10730255  T

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Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 217 - 280
Target Start/End: Complemental strand, 35071475 - 35071411
Alignment:
Q  217 aagcttgtcaaggtagtttatgaa-aaaatagttaatgaagatacaatctttgttagcgagaact 280  Q
    |||||||||||||||||||||||| ||||||| | |||||||| |||| ||| || | |||||||    
T  35071475 aagcttgtcaaggtagtttatgaaaaaaatagcttatgaagatgcaatgtttttttgtgagaact 35071411  T

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Target: scaffold0024 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 97290 - 97225
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||| ||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||    
T  97290 agcttatgcaaataaataagctattatgtagtattcataagctagtcaaggtagtttatgaaaaaa 97225  T

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Target: scaffold0012 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 178504 - 178596
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatg-aaaaaatagttaatgaagatacaatctttgttag 272  Q
    |||| |||||||||||||||||||||||||||| ||||| || | |||||| |||||| ||||||||||| ||||||||||||| || |||||    
T  178504 cttatgcaaataaataagcttttatgtattatttataagtttcttaaggtattttatgaaaaaaatagtttatgaagatacaattttcgttag 178596  T

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Target: scaffold0332 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 174 - 280
Target Start/End: Complemental strand, 14835 - 14729
Alignment:
Q  174 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagc 273  Q
    |||| ||||||  ||||||||||||||||||||||||||||||||| || | || |||||||||||||||  |||| || || ||||||| || |||||     
T  14835 ttttgagcttatacaaataaataagcttttatgtattattcataagtttttaaatgtagtttatgaaaaatcagtttataaatatacaattttcgttagt 14736  T
Q  274 gagaact 280  Q
    |||||||    
T  14735 gagaact 14729  T

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Target: scaffold0332; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 14946 - 14853
Alignment:
Q  171 ttattttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaat-agttaatgaagatacaat 263  Q
    ||||||| ||||||  | ||||||||||||||||||||| ||||||||| || | || |||||| |||||||||| |||| || ||||||||||    
T  14946 ttattttgagcttatacgaataaataagcttttatgtatcattcataagtttttaaatgtagttaatgaaaaaatcagtttataaagatacaat 14853  T

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Target: scaffold0041 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 109069 - 109011
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||    
T  109069 gcaaataaataagcctttatgtattactcataagcttgtcaaggtggtttatgaaaaaa 109011  T

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Target: scaffold0041; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 109152 - 109092
Alignment:
Q  174 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtt 234  Q
    |||| |||||| |||||||||||| ||| ||||||||||||||||||||| ||| ||||||    
T  109152 tttttagcttatgcaaataaataaacttctatgtattattcataagcttgccaatgtagtt 109092  T

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Target: scaffold0512 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 188 - 247
Target Start/End: Original strand, 4076 - 4135
Alignment:
Q  188 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatag 247  Q
    ||||||||||||||| |||||||||| |||||||||| ||| ||||||||||||||||||    
T  4076 aaataaataagctttaatgtattatttataagcttgtaaagatagtttatgaaaaaatag 4135  T

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Target: scaffold0048 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 188 - 263
Target Start/End: Complemental strand, 58943 - 58868
Alignment:
Q  188 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaat 263  Q
    |||||||||| | |||||||||||||| |||| ||||||| ||||||||||||||| || || |||||||||||||    
T  58943 aaataaataaacgtttatgtattattcttaagtttgtcaatgtagtttatgaaaaagtattttatgaagatacaat 58868  T

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Target: scaffold0057 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 43893 - 43835
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    ||||||||||||| |||||||||||||||| ||||||||| ||||||||||| ||||||    
T  43893 gcaaataaataagtttttatgtattattcaaaagcttgtcgaggtagtttataaaaaaa 43835  T

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Target: scaffold0057; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 24472 - 24418
Alignment:
Q  179 agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtt 234  Q
    |||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  24472 agcttatgcaaataaata-gcttgtatgtattattcataagcttgtcaaggtagtt 24418  T

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Target: scaffold1367 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 181 - 262
Target Start/End: Original strand, 1062 - 1143
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaa 262  Q
    |||| |||||||||||||||||||| |||||| |||||| |||| |||||| |||||| |||||||  | ||||||||||||    
T  1062 cttatgcaaataaataagcttttatttattatccataagattgttaaggtaatttatggaaaaataacttatgaagatacaa 1143  T

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Target: scaffold0299 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 181 - 261
Target Start/End: Complemental strand, 11382 - 11302
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagataca 261  Q
    |||| |||||||||||||||||||| |||||| ||| ||||||| |||||| |||||| |||||||  | |||||||||||    
T  11382 cttatgcaaataaataagcttttatttattatccattagcttgttaaggtaatttatggaaaaataacttatgaagataca 11302  T

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Target: scaffold0027 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 142333 - 142406
Alignment:
Q  171 ttattttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    ||||||| |||||| |||||||||| |||||||||||||||||||||  ||| | || ||| ||||||||||||    
T  142333 ttattttgagcttatgcaaataaatgagcttttatgtattattcatatacttattaatgtaatttatgaaaaaa 142406  T

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Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 244
Target Start/End: Original strand, 227688 - 227773
Alignment:
Q  160 tttgtattggtttatttta-agcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    |||| ||||| |||||||| |||||| || ||||||||||| || ||||| |||| ||||| |||| |||||||||||||||||||    
T  227688 tttggattggcttattttagagcttatgcgaataaataagcattaatgtagtatttataagtttgttaaggtagtttatgaaaaaa 227773  T

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Target: scaffold0004; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 186 - 277
Target Start/End: Complemental strand, 242716 - 242626
Alignment:
Q  186 gcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 277  Q
    ||||||||||||| |||||||||||||  ||||| || ||||| || |||||| ||||| || | |||||||||| || || ||||||||||    
T  242716 gcaaataaataagtttttatgtattatatataag-ttttcaagctattttatggaaaaacaggttatgaagatacgattttcgttagcgaga 242626  T

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Target: scaffold0022 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 89342 - 89282
Alignment:
Q  174 ttttaagcttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtt 234  Q
    ||||||||||| ||||||||| ||| ||| ||||| ||||||||||||| |||||||||||    
T  89342 ttttaagcttatgcaaataaaaaagttttaatgtactattcataagcttatcaaggtagtt 89282  T

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Target: scaffold0071 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 244
Target Start/End: Complemental strand, 18189 - 18148
Alignment:
Q  203 tatgtattattcataagcttgtcaaggtagtttatgaaaaaa 244  Q
    ||||||||||||| |||||||| |||||||||| ||||||||    
T  18189 tatgtattattcacaagcttgtaaaggtagtttctgaaaaaa 18148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 181 - 277
Target Start/End: Complemental strand, 279073 - 278978
Alignment:
Q  181 cttacgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaatagttaatgaagatacaatctttgttagcgaga 277  Q
    |||| ||||||| ||||  |||||||||||||| ||||| || | |||||||||||||||||||   || || |||||||||  |||||||| ||||    
T  279073 cttatgcaaatacataaatttttatgtattatttataagttttt-aaggtagtttatgaaaaaaccatttataaagatacaaattttgttagtgaga 278978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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