View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11745_high_81 (Length: 361)
Name: NF11745_high_81
Description: NF11745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11745_high_81 |
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Alignment Details
Target: chr7 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 1 - 342
Target Start/End: Complemental strand, 21880098 - 21879759
Alignment:
| Q |
1 |
cctaactgaacatatagttttgagttcccagttcatacataaacatcacctttgcaaatatgtttctaagttctgtggtccaatctcctaaggttcttat |
100 |
Q |
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||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |
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| T |
21880098 |
cctaactgaacatatggtt--gagttctcagttcatacataaacatcacctttgcaaatatgtttctaagttctgtagtccaatctcctaaggttcgtat |
21880001 |
T |
|
| Q |
101 |
atgaacactcaagtaatcatctccaggtgcagaggtgatcgagaaaggatgcctgtaaaaacgagtaaattcgattgtcctaagtaaaaataattttgca |
200 |
Q |
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|||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
21880000 |
atgaacactcaagtaatcgtctccaggtgcagaggtgatggagaaaggatgcctgtaaaaaagagtaaattcgattgtcctaagtaaaaataattttgca |
21879901 |
T |
|
| Q |
201 |
gaaaaattaacttttgtgctcaaaatatcatccaagtagatcataattaccattcaaaactagatatatctggacacttgacaaaaagatacattccact |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21879900 |
gaaaaattaacttttgtgctcaaaatatcatccaagtagatcataattaccattcaaaactagatatatctggacacttgacaaaaagatacattccact |
21879801 |
T |
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| Q |
301 |
ttgatacttgaatccttgtggcctggtcatgtatagtgctag |
342 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
21879800 |
ttgatacttgaatccttgtggcctggtcatgtatagtgctag |
21879759 |
T |
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