View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11745_high_85 (Length: 359)
Name: NF11745_high_85
Description: NF11745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11745_high_85 |
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Alignment Details
Target: chr2 (Bit Score: 184; Significance: 2e-99; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 106 - 322
Target Start/End: Original strand, 1186667 - 1186883
Alignment:
| Q |
106 |
tggaacaagtatgtattgttatgttattattagtgaatgtgctatgtgacattcatgtgtaattgagtcattcagggttcatgaagggtttattcatttt |
205 |
Q |
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| T |
1186667 |
tggaacaagtatgtattgttatgttattattagtgaatgtgctatgtgacattcatgtgtaattgagtcattcagggttcatgaagggtttattcatttt |
1186766 |
T |
|
| Q |
206 |
agtaggtagcgtgccgcaaaaccatttcccttcccaattccctttaattattgcctacgtggcacatcaattgtgtataaagtgacnnnnnnntttggga |
305 |
Q |
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| T |
1186767 |
agtaggtagcgtgccacaaaaccatttcccttcccaattcccttgaattattgcctacgtggcacatcaattatgtataaagtgacaaaaaaatttggga |
1186866 |
T |
|
| Q |
306 |
cctatatatatgtcatc |
322 |
Q |
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| T |
1186867 |
cctatatatatgtcatc |
1186883 |
T |
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