View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11745_low_149 (Length: 271)
Name: NF11745_low_149
Description: NF11745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11745_low_149 |
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Alignment Details
Target: chr8 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 20 - 261
Target Start/End: Original strand, 33750744 - 33750994
Alignment:
| Q |
20 |
ctcaggaaccacacgcgttcgtttcagcaaacaaagagaacgagaagaatattctaatctcttcttctcaggttattctcatctataaattcagtccaat |
119 |
Q |
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| T |
33750744 |
ctcaggaaccacacgcgttcgtttcagcaaacaaagagaacgagaagaaaattctaatctcttcttctcaggttattctcatctataaattcagtccaat |
33750843 |
T |
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| Q |
120 |
cttccataatttctctatt----tatttatttaatt-----gttttttggcgaattttgattgtaggtaatgagaaaaattcagttgcggattcatgaat |
210 |
Q |
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| T |
33750844 |
cttccataatttctctatttatttatttatttaattaattgtttttttggcgaattttgattgtaggtaatgagaaaaattcagttgcggattcatgaat |
33750943 |
T |
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| Q |
211 |
ttgattctgcttcaaacaaagaggattttgagcagcattgttctgttcatc |
261 |
Q |
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| T |
33750944 |
ttgattctgcttcaaacaaagaggattttgagcagcattgttctgttcatc |
33750994 |
T |
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