View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11745_low_154 (Length: 265)

Name: NF11745_low_154
Description: NF11745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11745_low_154
NF11745_low_154
[»] chr7 (89 HSPs)
chr7 (2-265)||(21880129-21880386)
chr7 (123-260)||(598190-598327)
chr7 (123-236)||(43027404-43027522)
chr7 (143-260)||(26733286-26733403)
chr7 (124-255)||(22484012-22484143)
chr7 (123-236)||(5409771-5409889)
chr7 (123-260)||(24105660-24105797)
chr7 (123-216)||(33994238-33994331)
chr7 (123-255)||(15680796-15680928)
chr7 (184-260)||(27945023-27945099)
chr7 (178-250)||(28155562-28155634)
chr7 (124-243)||(20549790-20549909)
chr7 (145-235)||(8234153-8234243)
chr7 (124-245)||(32287404-32287525)
chr7 (136-243)||(27093366-27093473)
chr7 (136-243)||(27184828-27184935)
chr7 (123-260)||(1401007-1401142)
chr7 (177-243)||(23191895-23191961)
chr7 (122-235)||(5835254-5835367)
chr7 (128-236)||(13770697-13770810)
chr7 (191-243)||(30813811-30813863)
chr7 (122-235)||(32093953-32094073)
chr7 (184-255)||(32308107-32308178)
chr7 (123-232)||(9778510-9778624)
chr7 (198-260)||(29787384-29787446)
chr7 (184-249)||(24339635-24339700)
chr7 (176-249)||(25481895-25481968)
chr7 (128-249)||(27732189-27732305)
chr7 (123-236)||(21864812-21864927)
chr7 (123-255)||(42720830-42720962)
chr7 (177-236)||(11061070-11061129)
chr7 (124-243)||(18035806-18035924)
chr7 (172-255)||(22868029-22868112)
chr7 (122-233)||(40287301-40287406)
chr7 (173-243)||(9482933-9483003)
chr7 (190-236)||(26033468-26033514)
chr7 (198-255)||(5235973-5236030)
chr7 (184-233)||(12843176-12843225)
chr7 (178-234)||(4909159-4909215)
chr7 (165-249)||(7197279-7197363)
chr7 (184-260)||(18215187-18215263)
chr7 (184-260)||(19206032-19206108)
chr7 (184-236)||(19992007-19992059)
chr7 (123-249)||(1433447-1433578)
chr7 (198-237)||(2424619-2424658)
chr7 (184-235)||(3991331-3991382)
chr7 (184-243)||(5548675-5548734)
chr7 (184-251)||(7328692-7328759)
chr7 (183-234)||(7438714-7438765)
chr7 (184-235)||(18013075-18013126)
chr7 (184-234)||(9408335-9408385)
chr7 (203-249)||(24289813-24289859)
chr7 (123-181)||(29763129-29763187)
chr7 (190-260)||(43249975-43250045)
chr7 (123-249)||(5307253-5307375)
chr7 (159-228)||(5937397-5937466)
chr7 (175-236)||(19213809-19213870)
chr7 (198-255)||(26329397-26329454)
chr7 (199-248)||(30731031-30731080)
chr7 (123-159)||(7328639-7328675)
chr7 (198-242)||(8160416-8160460)
chr7 (184-260)||(10042919-10042995)
chr7 (185-237)||(17851436-17851488)
chr7 (184-256)||(35861950-35862022)
chr7 (177-236)||(3721099-3721158)
chr7 (202-253)||(4880929-4880980)
chr7 (198-237)||(14729706-14729745)
chr7 (184-234)||(18039006-18039057)
chr7 (206-260)||(11722121-11722175)
chr7 (198-236)||(12289120-12289158)
chr7 (184-222)||(21560523-21560561)
chr7 (184-254)||(22602711-22602781)
chr7 (177-231)||(37775993-37776047)
chr7 (172-221)||(640134-640183)
chr7 (171-232)||(3554494-3554555)
chr7 (198-255)||(6630927-6630984)
chr7 (165-222)||(7973105-7973162)
chr7 (190-227)||(10547176-10547213)
chr7 (190-235)||(11665447-11665492)
chr7 (198-231)||(17307904-17307937)
chr7 (123-224)||(18212973-18213074)
chr7 (198-231)||(18233613-18233646)
chr7 (195-235)||(5954254-5954294)
chr7 (191-235)||(7058433-7058477)
chr7 (200-232)||(7133295-7133327)
chr7 (198-234)||(12278843-12278879)
chr7 (183-235)||(13300417-13300469)
chr7 (198-234)||(16341504-16341540)
chr7 (168-224)||(39138462-39138518)
[»] chr1 (117 HSPs)
chr1 (123-260)||(38078601-38078738)
chr1 (124-234)||(40258874-40258984)
chr1 (122-236)||(22515826-22515940)
chr1 (123-233)||(18337338-18337448)
chr1 (122-235)||(18190047-18190160)
chr1 (122-260)||(46348322-46348460)
chr1 (123-255)||(36878448-36878585)
chr1 (123-222)||(1815277-1815376)
chr1 (125-235)||(42359391-42359501)
chr1 (123-235)||(51410031-51410144)
chr1 (123-243)||(5898206-5898326)
chr1 (123-235)||(37598839-37598950)
chr1 (177-243)||(41877464-41877530)
chr1 (120-236)||(1486641-1486762)
chr1 (184-260)||(5376501-5376577)
chr1 (124-236)||(5927281-5927393)
chr1 (145-260)||(2896083-2896198)
chr1 (137-236)||(40181877-40181976)
chr1 (184-234)||(6612172-6612222)
chr1 (184-242)||(7918212-7918270)
chr1 (155-249)||(21530682-21530776)
chr1 (173-235)||(22881606-22881668)
chr1 (190-236)||(31015049-31015095)
chr1 (123-249)||(43492434-43492560)
chr1 (190-255)||(3490397-3490462)
chr1 (125-249)||(16297223-16297349)
chr1 (187-236)||(37055860-37055909)
chr1 (123-194)||(9828103-9828174)
chr1 (185-236)||(21378584-21378635)
chr1 (184-235)||(24577187-24577238)
chr1 (167-234)||(28674808-28674875)
chr1 (191-249)||(113292-113350)
chr1 (198-260)||(398780-398842)
chr1 (185-243)||(17754310-17754368)
chr1 (155-249)||(22907311-22907405)
chr1 (128-222)||(26830608-26830701)
chr1 (183-260)||(6415001-6415078)
chr1 (123-255)||(22794018-22794150)
chr1 (122-234)||(47989505-47989628)
chr1 (185-257)||(10572591-10572663)
chr1 (177-249)||(19058850-19058922)
chr1 (123-260)||(19562556-19562698)
chr1 (178-230)||(23636044-23636096)
chr1 (184-232)||(25361896-25361944)
chr1 (125-249)||(29163323-29163447)
chr1 (184-236)||(34712384-34712436)
chr1 (184-260)||(38503302-38503378)
chr1 (184-235)||(1704993-1705044)
chr1 (123-182)||(5944354-5944413)
chr1 (123-182)||(6427535-6427594)
chr1 (200-255)||(17831548-17831603)
chr1 (200-243)||(26238129-26238172)
chr1 (177-236)||(31672889-31672948)
chr1 (189-260)||(32724104-32724175)
chr1 (198-260)||(6427332-6427394)
chr1 (199-249)||(12443476-12443526)
chr1 (125-236)||(17778555-17778670)
chr1 (200-254)||(20157367-20157421)
chr1 (191-237)||(27471574-27471620)
chr1 (184-247)||(31694711-31694776)
chr1 (190-236)||(48450594-48450640)
chr1 (207-256)||(609482-609531)
chr1 (185-234)||(1864882-1864931)
chr1 (184-249)||(9629901-9629966)
chr1 (191-244)||(11605943-11605996)
chr1 (198-255)||(16927200-16927257)
chr1 (198-247)||(19324557-19324606)
chr1 (200-237)||(21038088-21038125)
chr1 (190-235)||(22947746-22947791)
chr1 (198-243)||(25098570-25098615)
chr1 (198-235)||(34298443-34298480)
chr1 (184-237)||(44482235-44482288)
chr1 (177-237)||(9709825-9709885)
chr1 (175-235)||(14332634-14332694)
chr1 (123-242)||(27965940-27966057)
chr1 (182-234)||(33351685-33351737)
chr1 (176-236)||(35702581-35702641)
chr1 (184-235)||(6332678-6332728)
chr1 (168-255)||(13997870-13997957)
chr1 (190-249)||(14359529-14359587)
chr1 (175-222)||(17007953-17008000)
chr1 (178-236)||(25452145-25452201)
chr1 (184-235)||(28273089-28273140)
chr1 (123-182)||(40917820-40917879)
chr1 (177-260)||(52903231-52903314)
chr1 (198-260)||(1262866-1262928)
chr1 (183-249)||(3921660-3921726)
chr1 (190-236)||(8010294-8010340)
chr1 (122-160)||(9630560-9630598)
chr1 (123-255)||(9690213-9690344)
chr1 (199-249)||(9828037-9828087)
chr1 (185-235)||(10233260-10233310)
chr1 (203-249)||(10474997-10475043)
chr1 (191-260)||(13011223-13011293)
chr1 (177-255)||(13436445-13436523)
chr1 (200-254)||(21057771-21057825)
chr1 (177-215)||(24334699-24334737)
chr1 (184-230)||(25272494-25272540)
chr1 (124-178)||(26526686-26526740)
chr1 (190-236)||(29144365-29144411)
chr1 (184-222)||(30173763-30173801)
chr1 (185-235)||(32434718-32434768)
chr1 (184-242)||(34371714-34371771)
chr1 (204-237)||(2851026-2851059)
chr1 (168-235)||(14248837-14248900)
chr1 (178-247)||(18556021-18556090)
chr1 (198-243)||(23714719-23714764)
chr1 (178-243)||(39953141-39953206)
chr1 (189-234)||(40747779-40747824)
chr1 (201-234)||(42325568-42325601)
chr1 (142-182)||(6427595-6427635)
chr1 (200-260)||(6936417-6936477)
chr1 (187-255)||(23622305-23622373)
chr1 (198-234)||(24176382-24176418)
chr1 (191-235)||(32461471-32461515)
chr1 (198-234)||(39101197-39101233)
chr1 (123-171)||(46940748-46940796)
[»] scaffold0050 (1 HSPs)
scaffold0050 (126-234)||(70286-70394)
[»] chr6 (109 HSPs)
chr6 (122-260)||(28152081-28152218)
chr6 (123-235)||(34595141-34595253)
chr6 (123-236)||(28715301-28715414)
chr6 (123-236)||(4877948-4878061)
chr6 (125-255)||(7265535-7265665)
chr6 (123-249)||(7977770-7977896)
chr6 (122-255)||(24645467-24645601)
chr6 (122-259)||(13360312-13360448)
chr6 (123-235)||(6898221-6898333)
chr6 (123-235)||(10770607-10770726)
chr6 (124-260)||(17841530-17841666)
chr6 (169-259)||(19040335-19040425)
chr6 (184-260)||(12696306-12696382)
chr6 (123-235)||(16833315-16833427)
chr6 (126-249)||(32978842-32978966)
chr6 (124-260)||(9658861-9658998)
chr6 (185-260)||(17435181-17435256)
chr6 (125-193)||(5000557-5000625)
chr6 (184-260)||(9107371-9107447)
chr6 (184-260)||(15489733-15489809)
chr6 (122-242)||(32511605-32511725)
chr6 (177-260)||(13851718-13851801)
chr6 (184-255)||(16766684-16766755)
chr6 (184-235)||(31384927-31384978)
chr6 (184-258)||(7801157-7801231)
chr6 (123-260)||(8776908-8777050)
chr6 (123-232)||(13364645-13364754)
chr6 (123-243)||(7377978-7378098)
chr6 (167-234)||(31579211-31579276)
chr6 (125-237)||(32298549-32298661)
chr6 (150-233)||(7740650-7740733)
chr6 (190-249)||(25038078-25038137)
chr6 (198-260)||(15443677-15443739)
chr6 (188-254)||(17341669-17341735)
chr6 (190-260)||(31959141-31959211)
chr6 (123-249)||(33001229-33001355)
chr6 (198-256)||(1532224-1532284)
chr6 (190-255)||(1681745-1681810)
chr6 (183-256)||(4859113-4859186)
chr6 (179-236)||(20370476-20370533)
chr6 (184-237)||(21395309-21395361)
chr6 (198-234)||(7569183-7569219)
chr6 (184-236)||(9025495-9025547)
chr6 (184-260)||(9027160-9027236)
chr6 (123-257)||(10339054-10339200)
chr6 (177-260)||(426508-426591)
chr6 (136-235)||(853812-853911)
chr6 (123-194)||(3209447-3209518)
chr6 (198-241)||(34073362-34073405)
chr6 (168-234)||(403849-403915)
chr6 (177-255)||(5732504-5732582)
chr6 (195-249)||(5970120-5970174)
chr6 (185-235)||(9522898-9522948)
chr6 (123-228)||(17327590-17327700)
chr6 (198-260)||(26562671-26562733)
chr6 (132-260)||(3398601-3398733)
chr6 (178-255)||(7938103-7938180)
chr6 (184-249)||(9629376-9629441)
chr6 (191-236)||(20576641-20576686)
chr6 (198-259)||(25207747-25207808)
chr6 (169-222)||(26402666-26402719)
chr6 (194-243)||(29220247-29220296)
chr6 (160-236)||(1191677-1191753)
chr6 (143-243)||(1315936-1316031)
chr6 (190-234)||(6327525-6327569)
chr6 (185-249)||(7086788-7086852)
chr6 (184-260)||(8365520-8365596)
chr6 (190-234)||(11800896-11800939)
chr6 (143-235)||(12627537-12627629)
chr6 (176-249)||(27904029-27904104)
chr6 (124-255)||(33419160-33419292)
chr6 (198-242)||(33817949-33817993)
chr6 (191-234)||(6349745-6349788)
chr6 (198-249)||(8805587-8805638)
chr6 (184-235)||(9195755-9195806)
chr6 (123-194)||(18367895-18367966)
chr6 (198-237)||(30866159-30866198)
chr6 (183-234)||(34895034-34895085)
chr6 (199-249)||(5000642-5000692)
chr6 (198-236)||(7996393-7996431)
chr6 (198-236)||(8022370-8022408)
chr6 (184-234)||(9617442-9617492)
chr6 (201-255)||(17168881-17168935)
chr6 (209-255)||(17422281-17422327)
chr6 (178-236)||(21924930-21924988)
chr6 (200-234)||(29049893-29049927)
chr6 (200-234)||(34446573-34446607)
chr6 (179-228)||(6751878-6751927)
chr6 (184-221)||(9911529-9911566)
chr6 (200-249)||(10842525-10842574)
chr6 (177-214)||(16388211-16388248)
chr6 (184-260)||(17302538-17302615)
chr6 (124-165)||(17341622-17341663)
chr6 (184-249)||(20371111-20371176)
chr6 (127-188)||(23130405-23130466)
chr6 (165-222)||(23771598-23771655)
chr6 (196-249)||(25096416-25096469)
chr6 (191-251)||(4118341-4118401)
chr6 (198-234)||(5462694-5462730)
chr6 (184-260)||(6214542-6214618)
chr6 (123-159)||(8805524-8805560)
chr6 (198-250)||(8931617-8931669)
chr6 (184-232)||(9024177-9024225)
chr6 (123-163)||(9911482-9911522)
chr6 (191-255)||(10031557-10031621)
chr6 (198-230)||(11591885-11591917)
chr6 (209-249)||(13211307-13211347)
chr6 (183-235)||(19044471-19044523)
chr6 (184-228)||(19369831-19369875)
[»] chr2 (82 HSPs)
chr2 (122-235)||(18840952-18841065)
chr2 (125-236)||(2438661-2438772)
chr2 (123-260)||(30404790-30404927)
chr2 (123-234)||(15972881-15972992)
chr2 (126-243)||(21091722-21091839)
chr2 (122-255)||(38117098-38117231)
chr2 (123-260)||(37558959-37559096)
chr2 (189-260)||(21374705-21374776)
chr2 (189-260)||(39323246-39323317)
chr2 (120-260)||(6940237-6940377)
chr2 (145-235)||(5367199-5367289)
chr2 (146-234)||(18570980-18571068)
chr2 (124-216)||(28596495-28596587)
chr2 (184-243)||(42832277-42832336)
chr2 (145-243)||(31808076-31808174)
chr2 (123-224)||(20242667-20242768)
chr2 (184-260)||(20539675-20539751)
chr2 (198-249)||(21616755-21616806)
chr2 (198-256)||(21782833-21782891)
chr2 (198-260)||(28412332-28412394)
chr2 (190-236)||(30717537-30717583)
chr2 (137-243)||(37411198-37411304)
chr2 (183-236)||(11223863-11223916)
chr2 (184-249)||(12668424-12668489)
chr2 (123-216)||(34993922-34994015)
chr2 (123-255)||(37419730-37419873)
chr2 (131-236)||(5040738-5040845)
chr2 (128-241)||(12224222-12224337)
chr2 (198-234)||(23921261-23921297)
chr2 (190-249)||(4882703-4882762)
chr2 (190-253)||(10535766-10535829)
chr2 (177-235)||(19536391-19536450)
chr2 (177-255)||(21624253-21624332)
chr2 (184-255)||(36756345-36756416)
chr2 (122-184)||(15907850-15907912)
chr2 (181-243)||(18276520-18276582)
chr2 (198-260)||(23718008-23718070)
chr2 (198-260)||(24105680-24105742)
chr2 (146-260)||(30335399-30335512)
chr2 (124-234)||(35449521-35449627)
chr2 (123-256)||(37497106-37497240)
chr2 (168-234)||(40361739-40361805)
chr2 (180-234)||(44605136-44605190)
chr2 (184-242)||(44860320-44860378)
chr2 (165-234)||(2415325-2415394)
chr2 (198-243)||(28677908-28677953)
chr2 (191-256)||(35447895-35447960)
chr2 (123-163)||(10535685-10535725)
chr2 (184-260)||(15657846-15657922)
chr2 (184-228)||(15909633-15909677)
chr2 (127-253)||(18589187-18589309)
chr2 (177-237)||(34691799-34691859)
chr2 (177-237)||(34714211-34714271)
chr2 (176-228)||(43585998-43586050)
chr2 (184-235)||(974754-974805)
chr2 (185-228)||(14450797-14450840)
chr2 (185-236)||(18420436-18420487)
chr2 (198-249)||(19573971-19574022)
chr2 (123-182)||(26769582-26769641)
chr2 (187-242)||(31456645-31456700)
chr2 (184-227)||(32749826-32749869)
chr2 (184-235)||(33153431-33153482)
chr2 (190-260)||(12940942-12941012)
chr2 (184-234)||(18421971-18422021)
chr2 (177-255)||(31018577-31018655)
chr2 (198-260)||(31284030-31284092)
chr2 (184-226)||(33884067-33884109)
chr2 (184-234)||(40681990-40682040)
chr2 (184-249)||(13273019-13273084)
chr2 (200-237)||(18889608-18889645)
chr2 (191-260)||(24894371-24894440)
chr2 (198-255)||(25080887-25080944)
chr2 (198-235)||(25846748-25846785)
chr2 (165-234)||(29176475-29176544)
chr2 (200-249)||(30298464-30298513)
chr2 (202-234)||(2331802-2331834)
chr2 (123-194)||(22084756-22084830)
chr2 (178-234)||(23406876-23406932)
chr2 (168-228)||(24067764-24067824)
chr2 (183-243)||(27286292-27286352)
chr2 (198-230)||(41942117-41942149)
chr2 (123-191)||(42511322-42511390)
[»] chr4 (92 HSPs)
chr4 (122-249)||(23292925-23293052)
chr4 (122-242)||(28964187-28964307)
chr4 (124-236)||(3947702-3947819)
chr4 (122-243)||(8423657-8423778)
chr4 (122-235)||(12797277-12797389)
chr4 (136-236)||(21945509-21945609)
chr4 (123-234)||(16073403-16073513)
chr4 (155-236)||(29205450-29205531)
chr4 (123-234)||(12895214-12895325)
chr4 (146-236)||(38846975-38847065)
chr4 (123-236)||(2361915-2362028)
chr4 (122-235)||(35157924-35158037)
chr4 (123-235)||(34306744-34306855)
chr4 (123-235)||(7214466-7214574)
chr4 (145-228)||(8402705-8402787)
chr4 (123-235)||(36635331-36635449)
chr4 (123-249)||(49431018-49431145)
chr4 (123-222)||(715545-715646)
chr4 (123-222)||(752871-752972)
chr4 (122-260)||(40179575-40179713)
chr4 (178-243)||(11135289-11135354)
chr4 (123-224)||(35161054-35161155)
chr4 (166-235)||(54580006-54580075)
chr4 (123-222)||(42640549-42640643)
chr4 (165-235)||(4157157-4157226)
chr4 (184-237)||(847956-848009)
chr4 (184-236)||(51701264-51701316)
chr4 (123-243)||(23861369-23861491)
chr4 (123-249)||(24613630-24613767)
chr4 (123-182)||(29205528-29205587)
chr4 (123-249)||(47263979-47264116)
chr4 (136-222)||(4157456-4157542)
chr4 (150-228)||(13307891-13307969)
chr4 (124-237)||(30982808-30982932)
chr4 (191-236)||(11596360-11596405)
chr4 (123-234)||(24343515-24343632)
chr4 (184-260)||(30298928-30299005)
chr4 (184-260)||(30327796-30327873)
chr4 (184-255)||(35723385-35723457)
chr4 (198-242)||(37698712-37698756)
chr4 (184-235)||(4383375-4383425)
chr4 (190-255)||(20633472-20633534)
chr4 (123-194)||(22234819-22234890)
chr4 (122-233)||(30103296-30103406)
chr4 (198-249)||(40613443-40613494)
chr4 (189-255)||(14126117-14126183)
chr4 (200-258)||(20743295-20743353)
chr4 (198-244)||(22440615-22440661)
chr4 (178-260)||(33950118-33950200)
chr4 (185-234)||(6485613-6485662)
chr4 (123-234)||(18513175-18513292)
chr4 (191-236)||(37203270-37203315)
chr4 (199-244)||(38148741-38148786)
chr4 (198-234)||(903930-903966)
chr4 (198-254)||(1747200-1747256)
chr4 (165-233)||(9996849-9996917)
chr4 (191-255)||(11651142-11651206)
chr4 (184-236)||(12895117-12895169)
chr4 (198-234)||(32910559-32910595)
chr4 (191-235)||(40481644-40481687)
chr4 (126-233)||(46715416-46715524)
chr4 (183-234)||(5775358-5775409)
chr4 (172-227)||(10499259-10499314)
chr4 (198-237)||(16189714-16189753)
chr4 (123-182)||(19482739-19482798)
chr4 (123-234)||(21345473-21345584)
chr4 (184-255)||(27706178-27706249)
chr4 (201-260)||(34515892-34515951)
chr4 (173-228)||(44362680-44362735)
chr4 (198-244)||(999363-999409)
chr4 (202-236)||(4672104-4672138)
chr4 (203-249)||(7012059-7012105)
chr4 (178-235)||(17425386-17425441)
chr4 (198-256)||(19230324-19230382)
chr4 (201-243)||(23700466-23700508)
chr4 (128-194)||(30838269-30838335)
chr4 (200-234)||(31243565-31243599)
chr4 (185-255)||(37496691-37496761)
chr4 (200-234)||(43299988-43300022)
chr4 (200-234)||(43300624-43300658)
chr4 (198-236)||(56257939-56257977)
chr4 (177-222)||(6879459-6879504)
chr4 (207-256)||(8820394-8820443)
chr4 (124-235)||(14465006-14465127)
chr4 (196-233)||(44796975-44797012)
chr4 (200-233)||(46180953-46180986)
chr4 (160-249)||(48139257-48139346)
chr4 (191-235)||(19482675-19482719)
chr4 (123-159)||(28470448-28470484)
chr4 (201-237)||(30522933-30522969)
chr4 (168-236)||(31800463-31800531)
chr4 (198-234)||(36386226-36386262)
[»] chr5 (81 HSPs)
chr5 (123-248)||(27932229-27932354)
chr5 (125-237)||(30502330-30502442)
chr5 (125-237)||(30542673-30542785)
chr5 (125-236)||(21190998-21191109)
chr5 (123-249)||(28588614-28588740)
chr5 (123-236)||(21576685-21576798)
chr5 (123-236)||(42893366-42893479)
chr5 (178-260)||(6326292-6326374)
chr5 (123-255)||(31084310-31084447)
chr5 (125-260)||(43001782-43001922)
chr5 (123-232)||(43564891-43565000)
chr5 (184-260)||(13287400-13287476)
chr5 (184-236)||(39698547-39698599)
chr5 (177-235)||(6247629-6247687)
chr5 (173-243)||(12927653-12927723)
chr5 (127-249)||(4105250-4105374)
chr5 (184-249)||(8420020-8420085)
chr5 (122-255)||(17123035-17123167)
chr5 (123-236)||(21194063-21194176)
chr5 (165-234)||(32630717-32630786)
chr5 (199-255)||(19438330-19438386)
chr5 (184-255)||(16374343-16374414)
chr5 (190-260)||(14674251-14674321)
chr5 (166-232)||(18421824-18421890)
chr5 (190-260)||(24906308-24906378)
chr5 (167-235)||(6770550-6770616)
chr5 (173-222)||(15884008-15884057)
chr5 (136-233)||(26312778-26312875)
chr5 (184-237)||(36838548-36838601)
chr5 (207-260)||(41600880-41600933)
chr5 (178-234)||(2548395-2548451)
chr5 (172-260)||(16203784-16203872)
chr5 (184-236)||(19579707-19579759)
chr5 (184-260)||(21522732-21522808)
chr5 (184-260)||(21533298-21533374)
chr5 (184-236)||(41633741-41633793)
chr5 (184-243)||(3966502-3966561)
chr5 (190-249)||(7218274-7218333)
chr5 (136-249)||(15382470-15382591)
chr5 (190-249)||(25863197-25863256)
chr5 (198-236)||(6471904-6471942)
chr5 (125-234)||(7997108-7997217)
chr5 (183-237)||(12264829-12264883)
chr5 (154-236)||(23012379-23012461)
chr5 (122-192)||(30098387-30098457)
chr5 (167-252)||(42126304-42126387)
chr5 (200-257)||(4344727-4344784)
chr5 (198-255)||(27144450-27144507)
chr5 (178-235)||(33178032-33178089)
chr5 (123-171)||(2436982-2437030)
chr5 (184-236)||(7677711-7677763)
chr5 (200-260)||(15410465-15410525)
chr5 (183-235)||(21351905-21351957)
chr5 (198-242)||(23016004-23016048)
chr5 (190-234)||(31264446-31264490)
chr5 (123-194)||(7677764-7677835)
chr5 (184-255)||(10298556-10298627)
chr5 (173-236)||(17177013-17177076)
chr5 (198-237)||(17593737-17593776)
chr5 (172-231)||(21194194-21194253)
chr5 (184-235)||(21542037-21542088)
chr5 (200-234)||(2419865-2419899)
chr5 (198-260)||(3751945-3752006)
chr5 (200-250)||(11596472-11596522)
chr5 (208-242)||(19746717-19746751)
chr5 (198-260)||(22013396-22013458)
chr5 (198-236)||(41091272-41091310)
chr5 (184-230)||(41558655-41558701)
chr5 (200-249)||(2039866-2039915)
chr5 (198-255)||(5467993-5468050)
chr5 (198-255)||(6035470-6035526)
chr5 (184-249)||(12641667-12641732)
chr5 (190-235)||(15405062-15405107)
chr5 (198-243)||(18592072-18592117)
chr5 (198-231)||(24273045-24273078)
chr5 (198-231)||(24389136-24389169)
chr5 (198-255)||(30098313-30098370)
chr5 (122-215)||(30098977-30099070)
chr5 (198-235)||(35017044-35017081)
chr5 (186-235)||(38464367-38464416)
chr5 (123-224)||(42029770-42029871)
[»] chr3 (92 HSPs)
chr3 (123-233)||(20503474-20503584)
chr3 (123-235)||(55401082-55401194)
chr3 (123-249)||(40993275-40993402)
chr3 (138-260)||(10954934-10955056)
chr3 (125-234)||(25775516-25775624)
chr3 (125-249)||(28917994-28918120)
chr3 (123-260)||(26492145-26492282)
chr3 (125-260)||(24204983-24205118)
chr3 (130-216)||(3631710-3631796)
chr3 (123-236)||(27505252-27505370)
chr3 (123-242)||(11251978-11252095)
chr3 (124-232)||(8789489-8789599)
chr3 (190-243)||(4990974-4991027)
chr3 (178-255)||(10268481-10268558)
chr3 (177-249)||(8383250-8383322)
chr3 (125-235)||(8412889-8412997)
chr3 (191-257)||(4987299-4987365)
chr3 (165-255)||(25093489-25093579)
chr3 (186-235)||(12083910-12083959)
chr3 (123-243)||(8842329-8842448)
chr3 (184-260)||(9800022-9800098)
chr3 (177-237)||(49505148-49505208)
chr3 (184-235)||(14209120-14209171)
chr3 (165-236)||(45451559-45451630)
chr3 (177-243)||(7928449-7928515)
chr3 (124-235)||(15999951-16000068)
chr3 (190-236)||(26508116-26508162)
chr3 (178-236)||(51206348-51206406)
chr3 (184-237)||(8039836-8039889)
chr3 (190-255)||(34307787-34307852)
chr3 (184-236)||(1509545-1509597)
chr3 (123-231)||(7171513-7171620)
chr3 (184-236)||(14832105-14832157)
chr3 (178-234)||(20691327-20691383)
chr3 (184-236)||(49651787-49651839)
chr3 (172-242)||(3618881-3618949)
chr3 (198-249)||(11493376-11493427)
chr3 (191-234)||(17568691-17568734)
chr3 (184-255)||(21479105-21479176)
chr3 (184-235)||(34910324-34910375)
chr3 (177-236)||(35994733-35994790)
chr3 (190-236)||(21256993-21257039)
chr3 (122-224)||(35222956-35223058)
chr3 (198-243)||(1438803-1438848)
chr3 (191-248)||(3164033-3164090)
chr3 (167-216)||(3865700-3865749)
chr3 (179-260)||(8587017-8587098)
chr3 (198-243)||(16192765-16192810)
chr3 (191-236)||(25948895-25948940)
chr3 (123-188)||(28812580-28812645)
chr3 (184-249)||(34185124-34185189)
chr3 (198-242)||(10690277-10690321)
chr3 (184-236)||(11313801-11313853)
chr3 (189-237)||(11610526-11610574)
chr3 (184-260)||(14216874-14216950)
chr3 (184-260)||(14223003-14223079)
chr3 (198-234)||(21211296-21211332)
chr3 (122-214)||(23657767-23657859)
chr3 (177-255)||(32400702-32400777)
chr3 (166-243)||(32804527-32804600)
chr3 (123-171)||(40052383-40052431)
chr3 (124-171)||(1389909-1389956)
chr3 (198-249)||(5407262-5407313)
chr3 (184-255)||(11665931-11666002)
chr3 (198-249)||(12704000-12704051)
chr3 (173-228)||(14338473-14338528)
chr3 (184-255)||(14829677-14829747)
chr3 (198-249)||(23870574-23870625)
chr3 (200-243)||(52369774-52369817)
chr3 (198-236)||(9624647-9624685)
chr3 (168-222)||(15505775-15505829)
chr3 (184-234)||(15796295-15796345)
chr3 (185-235)||(17005621-17005671)
chr3 (200-234)||(21149075-21149109)
chr3 (183-249)||(22774070-22774136)
chr3 (198-236)||(27277853-27277891)
chr3 (181-251)||(28576707-28576777)
chr3 (198-260)||(32429395-32429457)
chr3 (184-237)||(1550145-1550198)
chr3 (125-182)||(4987222-4987279)
chr3 (199-236)||(14979187-14979224)
chr3 (198-255)||(15544680-15544737)
chr3 (201-234)||(16789668-16789701)
chr3 (199-260)||(21720746-21720807)
chr3 (200-249)||(25074782-25074831)
chr3 (190-235)||(28812522-28812567)
chr3 (198-255)||(29112295-29112352)
chr3 (122-171)||(34185051-34185100)
chr3 (184-249)||(47362555-47362620)
chr3 (184-255)||(14747548-14747620)
chr3 (198-234)||(14840306-14840342)
chr3 (190-218)||(35312078-35312106)
[»] scaffold0652 (1 HSPs)
scaffold0652 (124-261)||(403-540)
[»] chr8 (76 HSPs)
chr8 (145-234)||(31557005-31557093)
chr8 (123-260)||(36450694-36450831)
chr8 (123-249)||(14134692-14134818)
chr8 (125-236)||(3025557-3025668)
chr8 (126-233)||(40332200-40332307)
chr8 (125-255)||(20679337-20679467)
chr8 (123-236)||(18407725-18407838)
chr8 (161-260)||(20873051-20873150)
chr8 (123-234)||(33405324-33405435)
chr8 (125-235)||(926730-926840)
chr8 (127-249)||(5813585-5813707)
chr8 (123-243)||(8343315-8343446)
chr8 (123-243)||(8342971-8343086)
chr8 (176-235)||(4948659-4948718)
chr8 (184-255)||(24669420-24669491)
chr8 (198-249)||(34897078-34897129)
chr8 (166-256)||(22595980-22596070)
chr8 (159-249)||(27101508-27101597)
chr8 (182-255)||(22197741-22197814)
chr8 (123-228)||(24413499-24413604)
chr8 (168-249)||(42874515-42874596)
chr8 (191-255)||(7442832-7442896)
chr8 (184-236)||(25566847-25566899)
chr8 (198-256)||(13203627-13203685)
chr8 (183-249)||(29447110-29447176)
chr8 (198-260)||(36934652-36934714)
chr8 (122-237)||(37283754-37283864)
chr8 (184-249)||(2572057-2572122)
chr8 (198-243)||(4611533-4611578)
chr8 (122-255)||(4786277-4786410)
chr8 (198-235)||(7658470-7658507)
chr8 (177-214)||(22204669-22204706)
chr8 (184-249)||(24362203-24362268)
chr8 (181-253)||(4298884-4298956)
chr8 (184-260)||(22651958-22652034)
chr8 (184-235)||(27067301-27067350)
chr8 (184-236)||(30077388-30077440)
chr8 (178-249)||(13844591-13844662)
chr8 (177-236)||(24613527-24613585)
chr8 (185-260)||(29510306-29510381)
chr8 (184-255)||(30271292-30271363)
chr8 (198-249)||(39954294-39954345)
chr8 (131-205)||(126295-126369)
chr8 (198-248)||(14634156-14634206)
chr8 (179-236)||(12606825-12606882)
chr8 (176-249)||(31236570-31236643)
chr8 (190-255)||(44067503-44067568)
chr8 (123-187)||(11944731-11944795)
chr8 (167-234)||(25886978-25887045)
chr8 (190-234)||(41831947-41831991)
chr8 (191-255)||(41838131-41838195)
chr8 (184-255)||(4673426-4673497)
chr8 (165-216)||(9414857-9414908)
chr8 (184-255)||(13436965-13437036)
chr8 (184-235)||(15816130-15816181)
chr8 (203-242)||(18067954-18067993)
chr8 (179-230)||(18170478-18170529)
chr8 (179-230)||(18634046-18634097)
chr8 (123-194)||(29447503-29447574)
chr8 (184-234)||(11927087-11927137)
chr8 (200-234)||(14513191-14513225)
chr8 (198-236)||(14731718-14731756)
chr8 (164-214)||(15023238-15023288)
chr8 (209-255)||(34259821-34259867)
chr8 (178-254)||(1979400-1979477)
chr8 (136-213)||(8293854-8293931)
chr8 (123-188)||(12570438-12570503)
chr8 (123-188)||(12570664-12570729)
chr8 (190-255)||(25192354-25192419)
chr8 (193-234)||(28642416-28642457)
chr8 (179-260)||(31109514-31109595)
chr8 (198-234)||(11803267-11803303)
chr8 (200-236)||(12559123-12559159)
chr8 (185-241)||(26434181-26434237)
chr8 (198-234)||(34201061-34201097)
chr8 (123-234)||(39820437-39820547)
[»] scaffold0004 (2 HSPs)
scaffold0004 (124-255)||(92794-92940)
scaffold0004 (184-216)||(123654-123686)
[»] scaffold0053 (1 HSPs)
scaffold0053 (123-260)||(8780-8917)
[»] scaffold0083 (1 HSPs)
scaffold0083 (123-222)||(45470-45569)
[»] scaffold0049 (2 HSPs)
scaffold0049 (178-237)||(63778-63837)
scaffold0049 (184-232)||(56932-56980)
[»] scaffold0361 (1 HSPs)
scaffold0361 (123-235)||(14537-14646)
[»] scaffold0022 (1 HSPs)
scaffold0022 (121-234)||(90851-90964)
[»] scaffold0793 (1 HSPs)
scaffold0793 (123-222)||(4821-4922)
[»] scaffold0223 (1 HSPs)
scaffold0223 (184-249)||(20165-20230)
[»] scaffold0018 (2 HSPs)
scaffold0018 (190-255)||(192256-192321)
scaffold0018 (183-260)||(178818-178896)
[»] scaffold0122 (1 HSPs)
scaffold0122 (123-235)||(8017-8128)
[»] scaffold0008 (1 HSPs)
scaffold0008 (125-236)||(263303-263425)
[»] scaffold0103 (1 HSPs)
scaffold0103 (166-260)||(51793-51890)
[»] scaffold0697 (1 HSPs)
scaffold0697 (155-249)||(1637-1731)
[»] scaffold0722 (1 HSPs)
scaffold0722 (143-247)||(6992-7096)
[»] scaffold1528 (1 HSPs)
scaffold1528 (185-243)||(1034-1092)
[»] scaffold0512 (1 HSPs)
scaffold0512 (123-205)||(4976-5058)
[»] scaffold0306 (1 HSPs)
scaffold0306 (125-260)||(13382-13523)
[»] scaffold0152 (1 HSPs)
scaffold0152 (125-260)||(21804-21945)
[»] scaffold0136 (1 HSPs)
scaffold0136 (184-234)||(3850-3900)
[»] scaffold0475 (1 HSPs)
scaffold0475 (123-212)||(3338-3427)
[»] scaffold0110 (1 HSPs)
scaffold0110 (185-260)||(28832-28907)
[»] scaffold0044 (1 HSPs)
scaffold0044 (190-233)||(53189-53232)
[»] scaffold0011 (1 HSPs)
scaffold0011 (184-235)||(17750-17801)
[»] scaffold0066 (1 HSPs)
scaffold0066 (195-249)||(33375-33429)
[»] scaffold0027 (1 HSPs)
scaffold0027 (184-234)||(46690-46740)
[»] scaffold0003 (1 HSPs)
scaffold0003 (123-188)||(241659-241724)
[»] scaffold0246 (1 HSPs)
scaffold0246 (191-235)||(19583-19626)
[»] scaffold0123 (1 HSPs)
scaffold0123 (198-242)||(44540-44584)
[»] scaffold0021 (1 HSPs)
scaffold0021 (190-234)||(130490-130534)
[»] scaffold0020 (2 HSPs)
scaffold0020 (184-236)||(135313-135365)
scaffold0020 (122-171)||(135262-135311)
[»] scaffold0036 (1 HSPs)
scaffold0036 (184-235)||(9748-9799)
[»] scaffold0025 (1 HSPs)
scaffold0025 (184-234)||(23777-23828)
[»] scaffold0171 (1 HSPs)
scaffold0171 (184-222)||(23531-23569)
[»] scaffold0085 (1 HSPs)
scaffold0085 (207-249)||(26386-26428)
[»] scaffold0019 (1 HSPs)
scaffold0019 (184-255)||(71710-71783)
[»] scaffold0007 (1 HSPs)
scaffold0007 (190-260)||(225275-225345)
[»] scaffold0598 (1 HSPs)
scaffold0598 (201-234)||(8071-8104)
[»] scaffold0376 (1 HSPs)
scaffold0376 (184-236)||(6318-6370)
[»] scaffold0126 (1 HSPs)
scaffold0126 (184-260)||(19127-19202)
[»] scaffold0057 (1 HSPs)
scaffold0057 (123-159)||(24119-24155)
[»] scaffold0024 (1 HSPs)
scaffold0024 (191-255)||(18116-18180)


Alignment Details
Target: chr7 (Bit Score: 173; Significance: 4e-93; HSPs: 89)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 2 - 265
Target Start/End: Complemental strand, 21880386 - 21880129
Alignment:
Q  2 ggtagggataaaaagtagggaccaaaaattgtggttcaattttttgtagtgatgaagcttgaaacatccgtaattctaaaaacatattcaaccctatttc 101  Q
    ||||||||||||| | ||||||| || |||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  21880386 ggtagggataaaatgcagggaccgaatattgtggttcaattttttatagcgacgaagcttgaaacatccgtaattctaaaaacatattcaaccctatttc 21880287  T
Q  102 tgataaaccttgactaattgactatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaat 201  Q
    |||||||||||||||      |||||||||||| |||||  ||||||||||| ||||||||| |||||||||||||||||| ||||| ||||||||||||    
T  21880286 tgataaaccttgact------ctatgaagcacggacacttctcggattaggcgtgtcctggtgtcggacatgtgtcgtgtccgacaccgacacttgtaat 21880193  T
Q  202 tacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtggtgtc 265  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||    
T  21880192 tacactgaattatgtaattttctcaaattattagcgatgtccacatgttagtgttcgtgttgtc 21880129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 123 - 260
Target Start/End: Complemental strand, 598327 - 598190
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||||||| |||||  ||||||||||| ||||| ||| ||||||| |||||||||||||||| |||||||  ||||||| | ||||| || |||||    
T  598327 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacttacaattacatttaattacgtgatttt 598228  T
Q  223 ctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    || |||||||||||| |||||| |||| ||||| ||||    
T  598227 cttaaattattagcggtgtcgatgtgtcagtgtccgtg 598190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 43027404 - 43027522
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacact-----gacacttgtaattacactgaattatgta 217  Q
    |||||||||||| |||||||||||||||||| ||||| ||| ||||||| ||||||||||||||||      |||||||||| |||||||| |||||||     
T  43027404 ctatgaagcacggacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacacgacaccgacacttgtatttacactgcattatgtg 43027503  T
Q  218 attttctcaaattattagc 236  Q
    ||||| |||||||||||||    
T  43027504 attttttcaaattattagc 43027522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 143 - 260
Target Start/End: Complemental strand, 26733403 - 26733286
Alignment:
Q  143 tcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtc 242  Q
    ||||||||||| ||| |  |||||||||||| |||||||| ||||| ||||| | |||||| |||||||||||| ||||| |||||||||||||| ||||    
T  26733403 tcggattaggcgtgttcccgtatcggacatgcgtcgtgtccgacaccgacacatttaattagactgaattatgtgattttgtcaaattattagcggtgtc 26733304  T
Q  243 gacgtgttagtgttcgtg 260  Q
    ||||||| ||||| ||||    
T  26733303 gacgtgtcagtgtccgtg 26733286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 124 - 255
Target Start/End: Complemental strand, 22484143 - 22484012
Alignment:
Q  124 tatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttc 223  Q
    ||||||||||| |||||  |||||| || ||||||  | | ||||||||||||| |||||||||| ||||| | |||||| ||||||||||| |||||||    
T  22484143 tatgaagcacggacacttctcggatcagacatgtctcgatgtcggacatgtgtcatgtctgacaccgacacatataattatactgaattatgcaattttc 22484044  T
Q  224 tcaaattattagcgatgtcgacgtgttagtgt 255  Q
    | |||||||||||| ||||| ||||| |||||    
T  22484043 taaaattattagcggtgtcggcgtgtcagtgt 22484012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 5409771 - 5409889
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtc-----tgacactgacacttgtaattacactgaattatgta 217  Q
    |||||||||||| |||||| ||||||||||| ||||| ||| ||||||| ||||||||||      ||||| ||||||||||||| |||||||||||||     
T  5409771 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttgtaattgcactgaattatgtg 5409870  T
Q  218 attttctcaaattattagc 236  Q
    ||||| |||||||||||||    
T  5409871 attttttcaaattattagc 5409889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 123 - 260
Target Start/End: Complemental strand, 24105797 - 24105660
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    ||||||||||| ||||||| |||| |||||| ||||| ||| |||||||  ||| ||| | ||| | |||||||||||||||||||||| ||| ||||||    
T  24105797 ctatgaagcacaaacactcctcgggttaggcgtgtcccggtgtcggacacatgttgtgcccgactccgacacttgtaattacactgaatcatgcaatttt 24105698  T
Q  223 ctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
     |||||||||||||  ||||| ||||| ||||| ||||    
T  24105697 ttcaaattattagctgtgtcggcgtgtcagtgtccgtg 24105660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 123 - 216
Target Start/End: Complemental strand, 33994331 - 33994238
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgt 216  Q
    ||||||| ||||||||||| | ||||||||| ||||  ||| | |||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  33994331 ctatgaaacacgaacactccttggattaggcgtgtctcggtgttggacatgtgtcgtgtctgacaccgacacttgtaattgcactgaattatgt 33994238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 255
Target Start/End: Complemental strand, 15680928 - 15680796
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||||||| |||||| ||| ||||| | ||||  ||| ||||||| |||||||||| ||||| ||||||| |||||||||| |||||||| |||||    
T  15680928 ctatgaagcacggacactcctcgaattagacgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttataattacactaaattatgtgatttt 15680829  T
Q  223 ctcaaattattagcgatgtcgacgtgttagtgt 255  Q
     |  |||||||||| |||||| ||||| |||||    
T  15680828 ttttaattattagctatgtcggcgtgtcagtgt 15680796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 27945099 - 27945023
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||| ||||| ||||    
T  27945099 gacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtg 27945023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 250
Target Start/End: Complemental strand, 28155634 - 28155562
Alignment:
Q  178 gtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgtt 250  Q
    ||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||    
T  28155634 gtgtccgacaccgacacttgtaattacaccgaattatgtaattttctcaaattattagcggtgtcggcgtgtt 28155562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 124 - 243
Target Start/End: Complemental strand, 20549909 - 20549790
Alignment:
Q  124 tatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttc 223  Q
    |||||||||||  ||||| ||||||||||| ||||    | |||||||||||| ||||| ||||| ||||| | |||||||||||||||| || ||||||    
T  20549909 tatgaagcacgggcactcctcggattaggcgtgtctcattgtcggacatgtgttgtgtccgacaccgacacatataattacactgaattacgtgattttc 20549810  T
Q  224 tcaaattattagcgatgtcg 243  Q
    |||||||||||||| |||||    
T  20549809 tcaaattattagcggtgtcg 20549790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 145 - 235
Target Start/End: Complemental strand, 8234243 - 8234153
Alignment:
Q  145 ggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    ||||||||| ||||  ||| |||||||||||||||||| ||||| | ||||||||| ||||||||||||||| ||||| ||||||||||||    
T  8234243 ggattaggcgtgtctcggtgtcggacatgtgtcgtgtccgacaccggcacttgtaactacactgaattatgttattttttcaaattattag 8234153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 124 - 245
Target Start/End: Original strand, 32287404 - 32287525
Alignment:
Q  124 tatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttc 223  Q
    ||||||||||| |||||| ||||||||||  ||||| ||| |||||||  |||| |||| ||||| ||||| | || || ||||||||||||| ||||||    
T  32287404 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacttgtcatgtccgacaccgacacatatacttgcactgaattatgtgattttc 32287503  T
Q  224 tcaaattattagcgatgtcgac 245  Q
    ||| |||||||||| |||||||    
T  32287504 tcagattattagcggtgtcgac 32287525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 243
Target Start/End: Original strand, 27093366 - 27093473
Alignment:
Q  136 acactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    |||||||||||||||||  |||||| || |||||||  |||||||||| |||| ||| | | |||||||||| |||||||| ||||||| ||||||||||    
T  27093366 acactcatcggattaggtgtgtcctagtgtcggacacatgtcgtgtctaacaccgacgcatataattacactaaattatgtgattttcttaaattattag 27093465  T
Q  236 cgatgtcg 243  Q
    || |||||    
T  27093466 cggtgtcg 27093473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 243
Target Start/End: Complemental strand, 27184935 - 27184828
Alignment:
Q  136 acactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    |||||||||||||||||  |||||| || |||||||  |||||||||| |||| ||| | | |||||||||| |||||||| ||||||| ||||||||||    
T  27184935 acactcatcggattaggtgtgtcctagtgtcggacacatgtcgtgtctaacaccgacgcatataattacactaaattatgtgattttcttaaattattag 27184836  T
Q  236 cgatgtcg 243  Q
    || |||||    
T  27184835 cggtgtcg 27184828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 123 - 260
Target Start/End: Complemental strand, 1401142 - 1401007
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||||| | |||||| || |||||||  ||||| | | ||||||||||  |||||| ||||| || |||| ||||||||||||||||||| | |||    
T  1401142 ctatgaagcatggacactcctcagattaggtgtgtcccgatgtcggacatgt--cgtgtcggacaccgatacttataattacactgaattatgtgagttt 1401045  T
Q  223 ctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||||||||||||||| ||  ||||| ||||| ||||    
T  1401044 ctcaaattattagcgatatcagcgtgtcagtgtccgtg 1401007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 23191961 - 23191895
Alignment:
Q  177 cgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcg 243  Q
    ||||||||||||||| || ||||||||||||||| ||||| |||||||||||||||||||| |||||    
T  23191961 cgtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcggtgtcg 23191895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 5835367 - 5835254
Alignment:
Q  122 actatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattt 221  Q
    ||||| |||||  ||||||  |||||||| || ||||| |||||| ||||  |||| |||||||||| ||||| | ||||||||||||||||||| ||||    
T  5835367 actataaagcaaaaacacttctcggattaagcgtgtcccggtatcagacacatgtcatgtctgacaccgacacatataattacactgaattatgttattt 5835268  T
Q  222 tctcaaattattag 235  Q
    ||||||| ||||||    
T  5835267 tctcaaactattag 5835254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 128 - 236
Target Start/End: Complemental strand, 13770810 - 13770697
Alignment:
Q  128 aagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacact-----gacacttgtaattacactgaattatgtaatttt 222  Q
    ||||||| |||||| ||||||||||| ||| | ||| ||||||| |||| ||||| |||||      |||||||||||||||||||||||||||||||||    
T  13770810 aagcacggacactcttcggattaggcgtgttccggtgtcggacacgtgttgtgtccgacacgacaacgacacttgtaattacactgaattatgtaatttt 13770711  T
Q  223 ctcaaattattagc 236  Q
     | |||||||||||    
T  13770710 tttaaattattagc 13770697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 30813863 - 30813811
Alignment:
Q  191 acacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcg 243  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  30813863 acacctgtaattacactgaattatgtaattttctcaaattattagcaatgtcg 30813811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 32093953 - 32094073
Alignment:
Q  122 actatgaagcacgaacactcatcggattaggcatgt-cctggtatcggacatgtgtcgtgtc-----tgacactgacacttgtaattacactgaattatg 215  Q
    |||||||||||||||||||| ||||||||||| ||| || ||| ||||||| ||||||||||      ||||| |||| |||||||||||||||||||||    
T  32093953 actatgaagcacgaacactcctcggattaggcgtgtccccggtgtcggacacgtgtcgtgtccgacacgacaccgacatttgtaattacactgaattatg 32094052  T
Q  216 t-aattttctcaaattattag 235  Q
    | | |||| ||||||||||||    
T  32094053 tgatttttttcaaattattag 32094073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 32308178 - 32308107
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    ||||||||||| |  |||||||||||||||||| |||||||||||||||||||| ||||| ||||| |||||    
T  32308178 gacactgacacatacaattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgt 32308107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 232
Target Start/End: Complemental strand, 9778624 - 9778510
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacact-----gacacttgtaattacactgaattatgta 217  Q
    |||||||||||| |||||| | ||||||||| ||||| ||| ||||||| |||| ||||| |||||      |||||||||||||| ||||||||||||     
T  9778624 ctatgaagcacggacactccttggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacacgacaccgacacttgtaattatactgaattatgtg 9778525  T
Q  218 attttctcaaattat 232  Q
    ||||| |||||||||    
T  9778524 attttttcaaattat 9778510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 260
Target Start/End: Original strand, 29787384 - 29787446
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||| ||||||| ||| ||||    
T  29787384 taattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgttaatgtccgtg 29787446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 24339700 - 24339635
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    ||||| ||||||||||||||||||||||||||| ||||| |||||||||||||  ||||| |||||    
T  24339700 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgt 24339635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 249
Target Start/End: Complemental strand, 25481968 - 25481895
Alignment:
Q  176 tcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    ||||||| |||||  |||||||||||||||||||||||||| ||||| |||||||||||||  ||||| |||||    
T  25481968 tcgtgtccgacaccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgt 25481895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 128 - 249
Target Start/End: Original strand, 27732189 - 27732305
Alignment:
Q  128 aagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaa 227  Q
    ||||||| |||||  ||| ||||||  ||||||||| |||||||| ||||||||     || ||||| | ||||||||||||||||||||||||||| ||    
T  27732189 aagcacggacacttttcgaattaggtgtgtcctggtgtcggacatatgtcgtgt-----accgacacatataattacactgaattatgtaattttcttaa 27732283  T
Q  228 attattagcgatgtcgacgtgt 249  Q
    ||||||| || |||| ||||||    
T  27732284 attattaacgttgtcaacgtgt 27732305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 236
Target Start/End: Complemental strand, 21864927 - 21864812
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaa--tt 220  Q
    |||||||||||  |||||| ||| ||||| | ||||| ||| ||||||| |||||||||| ||||  |||||||||||||||||| |||||| | |  ||    
T  21864927 ctatgaagcacagacactcctcgaattagacgtgtcccggtgtcggacacgtgtcgtgtccgacagcgacacttgtaattacactaaattatatgatttt 21864828  T
Q  221 ttctcaaattattagc 236  Q
    || |||||||||||||    
T  21864827 ttttcaaattattagc 21864812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 255
Target Start/End: Original strand, 42720830 - 42720962
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    ||||||||||| |||||| |||| ||||| | ||| | ||| | | |||  ||| ||||| ||||||||||| | |||||||| | |||||||| |||||    
T  42720830 ctatgaagcacaaacacttatcgaattagacgtgttccggtgttgtacacatgttgtgtcagacactgacacatataattacatttaattatgtgatttt 42720929  T
Q  223 ctcaaattattagcgatgtcgacgtgttagtgt 255  Q
     |||||||||||||| |||| |||||| |||||    
T  42720930 ttcaaattattagcggtgtcaacgtgtcagtgt 42720962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 11061070 - 11061129
Alignment:
Q  177 cgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    |||||||||||| |||||||||||||| ||| |||||||| ||||| |||||||||||||    
T  11061070 cgtgtctgacaccgacacttgtaattatactaaattatgtgattttttcaaattattagc 11061129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 124 - 243
Target Start/End: Original strand, 18035806 - 18035924
Alignment:
Q  124 tatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttc 223  Q
    ||||||||||| |||||| ||||||||| | ||| | | | || |||||||||| | ||| |||||||||| ||||||||| ||||||||||| |||| |    
T  18035806 tatgaagcacggacactcctcggattagacgtgttccg-tgtcagacatgtgtcctatctcacactgacacatgtaattacgctgaattatgtgatttcc 18035904  T
Q  224 tcaaattattagcgatgtcg 243  Q
    | ||||||| |||| |||||    
T  18035905 taaaattatcagcggtgtcg 18035924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 255
Target Start/End: Complemental strand, 22868112 - 22868029
Alignment:
Q  172 tgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    ||||| |||| ||| |||||||| | ||||||||||||||||||| ||||||||| |||||||| | ||||| ||||| |||||    
T  22868112 tgtgttgtgtttgatactgacacatataattacactgaattatgtgattttctcatattattagtggtgtcggcgtgtcagtgt 22868029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 233
Target Start/End: Original strand, 40287301 - 40287406
Alignment:
Q  122 actatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattt 221  Q
    |||| |||||||| |||||| ||||||||||||||||| ||| |||||||||||||      || || ||||||||||||||||||||| ||| | ||||    
T  40287301 actacgaagcacggacactcctcggattaggcatgtcccggtgtcggacatgtgtcc-----gataccgacacttgtaattacactgaa-tatatgattt 40287394  T
Q  222 tctcaaattatt 233  Q
    | ||||||||||    
T  40287395 tttcaaattatt 40287406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 9483003 - 9482933
Alignment:
Q  173 gtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcg 243  Q
    |||||| ||| ||||| ||||| | ||||||||||||||| ||| ||||||||||||||| ||||||||||    
T  9483003 gtgtcgcgtccgacaccgacacatataattacactgaattgtgtgattttctcaaattatcagcgatgtcg 9482933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 26033468 - 26033514
Alignment:
Q  190 gacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||    
T  26033468 gacacttgtaattacactgaattatgtgattttttcaaattattagc 26033514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 5236030 - 5235973
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    |||||||||| |||||| ||||||||| |||||||||||| ||||||||||| |||||    
T  5236030 taattacactaaattatataattttcttaaattattagcggtgtcgacgtgtcagtgt 5235973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 233
Target Start/End: Original strand, 12843176 - 12843225
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattatt 233  Q
    ||||||||||| |||||||||| |||||||||||||||| ||||||||||    
T  12843176 gacactgacacatgtaattacattgaattatgtaattttatcaaattatt 12843225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 4909215 - 4909159
Alignment:
Q  178 gtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattatta 234  Q
    ||||| ||||||||||| | | |||||| ||||||||||||||||||||||||||||    
T  4909215 gtgtccgacactgacacatatgattacaatgaattatgtaattttctcaaattatta 4909159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 165 - 249
Target Start/End: Original strand, 7197279 - 7197363
Alignment:
Q  165 tcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    |||||||||||| ||||| ||||| |||||||||||||||| |||||||  | ||||| | |||||||||||  ||||| |||||    
T  7197279 tcggacatgtgttgtgtccgacaccgacacttgtaattacattgaattaaatgatttttttaaattattagctgtgtcggcgtgt 7197363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 260
Target Start/End: Original strand, 18215187 - 18215263
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||| ||||||||||| ||||||| ||||||| ||||| |||||||||||||   |||| ||||||||||| ||||    
T  18215187 gacaccgacacttgtaactacactgcattatgtgattttttcaaattattagctgcgtcggcgtgttagtgtccgtg 18215263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 19206108 - 19206032
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||| ||||| | |||||| | |||||||||| |||||||||||||||||||| ||||| |||||| |||| ||||    
T  19206108 gacaccgacacatataattataatgaattatgtgattttctcaaattattagcggtgtcggcgtgttggtgtccgtg 19206032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 19992059 - 19992007
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    ||||| ||||||| ||||||||||||| ||||| |||||||||||||||||||    
T  19992059 gacaccgacacttataattacactgaaatatgtgattttctcaaattattagc 19992007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 249
Target Start/End: Complemental strand, 1433578 - 1433447
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtc-----tgacactgacacttgtaattacactgaattatgta 217  Q
    |||||||||||| |||||| ||||||||| | ||||||||| |||||||  |||| ||||      ||||| ||||| | |||||||||  ||| ||||     
T  1433578 ctatgaagcacggacactcctcggattagacgtgtcctggtgtcggacacatgtcttgtccgacacgacaccgacacatataattacaccaaatgatgtg 1433479  T
Q  218 attttctcaaattattagcgatgtcgacgtgt 249  Q
    ||||||||||||||||| || ||||| |||||    
T  1433478 attttctcaaattattaacggtgtcggcgtgt 1433447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 237
Target Start/End: Complemental strand, 2424658 - 2424619
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcg 237  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  2424658 taattacactgaattatgtgattttctcaaattattagcg 2424619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 3991382 - 3991331
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    ||||| |||||||||||||| |||||||||||| ||||| ||||||||||||    
T  3991382 gacaccgacacttgtaattatactgaattatgtgattttttcaaattattag 3991331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 243
Target Start/End: Complemental strand, 5548734 - 5548675
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcg 243  Q
    ||||||||||| | ||||||||||||||||| | ||||||||||||||| |||| |||||    
T  5548734 gacactgacacatataattacactgaattatttgattttctcaaattatcagcggtgtcg 5548675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 7328692 - 7328759
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgtta 251  Q
    ||||| ||||| | |||||||||| |||||||| |||||||||||||||||||  | |||||||||||    
T  7328692 gacaccgacacatataattacactaaattatgttattttctcaaattattagcagtatcgacgtgtta 7328759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 7438765 - 7438714
Alignment:
Q  183 tgacactgacacttgtaattacactgaattatgtaattttctcaaattatta 234  Q
    |||||| |||||||||||||||| |||||||||| ||||| |||||||||||    
T  7438765 tgacaccgacacttgtaattacattgaattatgtgattttttcaaattatta 7438714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 18013075 - 18013126
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    ||||||||||| | ||||||||||||||||||||||||| | ||||||||||    
T  18013075 gacactgacacatataattacactgaattatgtaatttttttaaattattag 18013126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 9408335 - 9408385
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattatta 234  Q
    ||||| |||||||||||||||||| |||||||| ||||| |||||||||||    
T  9408335 gacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 9408385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 203 - 249
Target Start/End: Complemental strand, 24289859 - 24289813
Alignment:
Q  203 acactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    ||||||||||||||||||||||||||||||| ||| ||||| |||||    
T  24289859 acactgaattatgtaattttctcaaattattggcggtgtcggcgtgt 24289813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 123 - 181
Target Start/End: Original strand, 29763129 - 29763187
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgt 181  Q
    |||||||||||| |||||| ||||||||||| ||||||| | ||||||| |||||||||    
T  29763129 ctatgaagcacggacactcctcggattaggcgtgtcctgatgtcggacacgtgtcgtgt 29763187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 260
Target Start/End: Complemental strand, 43250045 - 43249975
Alignment:
Q  190 gacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||||| ||||||||||| ||||||| ||||||||||||||||| |  ||||| ||||| ||||| ||||    
T  43250045 gacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtg 43249975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 249
Target Start/End: Complemental strand, 5307375 - 5307253
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||||||| |||||| | ||||||||| |||||| || ||| |||| | || ||| |||||||||||| | |||| ||    |||||||| |||||    
T  5307375 ctatgaagcacgtacactccttggattaggcgtgtcctagtgtcgcacatctatcttgtatgacactgacacatataatcac----aattatgtgatttt 5307280  T
Q  223 ctcaaattattagcgatgtcgacgtgt 249  Q
    |||||||||| || | ||||| |||||    
T  5307279 ctcaaattataagtggtgtcggcgtgt 5307253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 228
Target Start/End: Original strand, 5937397 - 5937466
Alignment:
Q  159 ctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaa 228  Q
    ||||| || ||||||| ||||| | ||||| ||||||||| |||||| |||||||||| |||||||||||    
T  5937397 ctggtgtccgacatgtatcgtgaccgacacagacacttgtgattacattgaattatgtcattttctcaaa 5937466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 19213870 - 19213809
Alignment:
Q  175 gtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    |||||||| ||||| |||||||||| |||||||| ||||||| ||||| | |||||||||||    
T  19213870 gtcgtgtccgacaccgacacttgtatttacactgcattatgtgattttttaaaattattagc 19213809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 255
Target Start/End: Original strand, 26329397 - 26329454
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    ||||||||||||||| |||  |||||||||||||||| |||||||| ||||| |||||    
T  26329397 taattacactgaattgtgtgtttttctcaaattattaacgatgtcggcgtgtcagtgt 26329454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 248
Target Start/End: Complemental strand, 30731080 - 30731031
Alignment:
Q  199 aattacactgaattatgtaattttctcaaattattagcgatgtcgacgtg 248  Q
    |||||||||||||||||| |||||||||||||||| ||| ||||| ||||    
T  30731080 aattacactgaattatgtgattttctcaaattattcgcggtgtcggcgtg 30731031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 159
Target Start/End: Original strand, 7328639 - 7328675
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcc 159  Q
    ||||||||||||||||||||||||||||||| |||||    
T  7328639 ctatgaagcacgaacactcatcggattaggcgtgtcc 7328675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 8160460 - 8160416
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtc 242  Q
    |||||||||| |||||||||||||||| |||||||||||| ||||    
T  8160460 taattacactaaattatgtaattttcttaaattattagcggtgtc 8160416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 10042995 - 10042919
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||||||||||| ||||||| || |||||||| | ||| |||||||||||| | ||||| ||||| ||||| ||||    
T  10042995 gacactgacacttataattacgctaaattatgtgaatttatcaaattattagtggtgtcggcgtgtaagtgtccgtg 10042919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 17851488 - 17851436
Alignment:
Q  185 acactgacacttgtaattacactgaattatgtaattttctcaaattattagcg 237  Q
    |||| ||||| | ||||||||||||||||||| ||||||| ||||||||||||    
T  17851488 acacagacacatataattacactgaattatgtgattttctaaaattattagcg 17851436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 256
Target Start/End: Complemental strand, 35862022 - 35861950
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgtt 256  Q
    ||||| |||||||  ||||||| |||||||||| ||||| ||||||||||||   ||||| ||||||||||||    
T  35862022 gacacagacacttacaattacattgaattatgtgattttttcaaattattagttgtgtcggcgtgttagtgtt 35861950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 3721158 - 3721099
Alignment:
Q  177 cgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    |||||| ||||| ||||| | |||||| ||| |||||||| |||||||||||||||||||    
T  3721158 cgtgtccgacaccgacacatataattatactaaattatgtgattttctcaaattattagc 3721099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 253
Target Start/End: Original strand, 4880929 - 4880980
Alignment:
Q  202 tacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagt 253  Q
    ||||||| ||||||||||||| | ||||||||||| |||||| |||||||||    
T  4880929 tacactgtattatgtaatttttttaaattattagcaatgtcggcgtgttagt 4880980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 237
Target Start/End: Complemental strand, 14729745 - 14729706
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcg 237  Q
    |||||||||||||||| || ||||||||||||||||||||    
T  14729745 taattacactgaattacgtgattttctcaaattattagcg 14729706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 18039057 - 18039006
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgt-aattttctcaaattatta 234  Q
    ||||| ||||||||||||||||||||||||||| | |||| |||||||||||    
T  18039057 gacaccgacacttgtaattacactgaattatgtgatttttttcaaattatta 18039006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 260
Target Start/End: Original strand, 11722121 - 11722175
Alignment:
Q  206 ctgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||||||||| ||||||||||||| |||||| ||||| ||||| ||||| ||||    
T  11722121 ctgaattatgtgattttctcaaattgttagcggtgtcggcgtgtcagtgtccgtg 11722175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 236
Target Start/End: Complemental strand, 12289158 - 12289120
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagc 236  Q
    ||||| ||||||||||||| |||||||||||||||||||    
T  12289158 taattccactgaattatgtgattttctcaaattattagc 12289120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 21560561 - 21560523
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaatttt 222  Q
    ||||| ||||||||||||||||||||||||||| |||||    
T  21560561 gacaccgacacttgtaattacactgaattatgtgatttt 21560523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 254
Target Start/End: Original strand, 22602711 - 22602781
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtg 254  Q
    ||||| ||||| | ||||||||||||||||||| |||||||||||| |||  || ||||| ||||| ||||    
T  22602711 gacaccgacacatataattacactgaattatgtgattttctcaaataatttacggtgtcggcgtgtcagtg 22602781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 37776047 - 37775993
Alignment:
Q  177 cgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaatta 231  Q
    ||||||| |||||||||| ||| |||||| | |||||||| ||||||||||||||    
T  37776047 cgtgtcttacactgacacatgtgattacatttaattatgtcattttctcaaatta 37775993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 640183 - 640134
Alignment:
Q  172 tgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattt 221  Q
    |||||||| |||||||| ||||| | ||||||||||||||||||| ||||    
T  640183 tgtgtcgtatctgacaccgacacatataattacactgaattatgtgattt 640134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 232
Target Start/End: Original strand, 3554494 - 3554555
Alignment:
Q  171 atgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattat 232  Q
    |||||||||||| ||||| ||||  | |||||||| | |||||||||||||||| |||||||    
T  3554494 atgtgtcgtgtccgacaccgacatctataattacattaaattatgtaattttcttaaattat 3554555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 255
Target Start/End: Original strand, 6630927 - 6630984
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    |||||||||||||||| || | |||||||||||||||| | ||||| ||||| |||||    
T  6630927 taattacactgaattaagtgactttctcaaattattagtggtgtcggcgtgtcagtgt 6630984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 222
Target Start/End: Original strand, 7973105 - 7973162
Alignment:
Q  165 tcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    ||||||||||||||||||| ||||  ||| ||||||||||| | |||||||| |||||    
T  7973105 tcggacatgtgtcgtgtctcacaccaacatttgtaattacattaaattatgtgatttt 7973162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 10547176 - 10547213
Alignment:
Q  190 gacacttgtaattacactgaattatgtaattttctcaa 227  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  10547176 gacacatgtaattacattgaattatgtaattttctcaa 10547213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 11665447 - 11665492
Alignment:
Q  190 gacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    ||||||| |||||| |||||||||||| ||||| ||||||||||||    
T  11665447 gacacttataattagactgaattatgtgattttttcaaattattag 11665492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 17307937 - 17307904
Alignment:
Q  198 taattacactgaattatgtaattttctcaaatta 231  Q
    ||||||||||||||||||| ||||||||||||||    
T  17307937 taattacactgaattatgttattttctcaaatta 17307904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 224
Target Start/End: Original strand, 18212973 - 18213074
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||||||  |||||| |||||| |||| |||||  || || || | | |||||||| ||||| ||||| | |||||||||| |||||||| |||||    
T  18212973 ctatgaagcacagacactcctcggataaggcgtgtccccgtgtcagaaaggggtcgtgtccgacaccgacacatataattacactaaattatgtgatttt 18213072  T
Q  223 ct 224  Q
    ||    
T  18213073 ct 18213074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 18233613 - 18233646
Alignment:
Q  198 taattacactgaattatgtaattttctcaaatta 231  Q
    ||||||||||||||||||| ||||||||||||||    
T  18233613 taattacactgaattatgtcattttctcaaatta 18233646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 5954294 - 5954254
Alignment:
Q  195 ttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    |||||||||||||  ||||||||||||| ||||||||||||    
T  5954294 ttgtaattacactagattatgtaattttttcaaattattag 5954254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 7058477 - 7058433
Alignment:
Q  191 acacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    |||||||||||||||||||||||  | ||||| ||||||||||||    
T  7058477 acacttgtaattacactgaattacatgattttttcaaattattag 7058433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 232
Target Start/End: Original strand, 7133295 - 7133327
Alignment:
Q  200 attacactgaattatgtaattttctcaaattat 232  Q
    ||||||||||||||||| |||||||||||||||    
T  7133295 attacactgaattatgtcattttctcaaattat 7133327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 234
Target Start/End: Complemental strand, 12278879 - 12278843
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattatta 234  Q
    ||||||||||||||||||| ||||||| |||||||||    
T  12278879 taattacactgaattatgtcattttcttaaattatta 12278843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 13300469 - 13300417
Alignment:
Q  183 tgacactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    |||||| || ||| |||||||||||||||||| | ||||| ||||||||||||    
T  13300469 tgacaccgagactggtaattacactgaattatatgattttttcaaattattag 13300417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 234
Target Start/End: Complemental strand, 16341540 - 16341504
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattatta 234  Q
    |||||||||| |||||||| |||||||||||||||||    
T  16341540 taattacacttaattatgtgattttctcaaattatta 16341504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 224
Target Start/End: Complemental strand, 39138518 - 39138462
Alignment:
Q  168 gacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttct 224  Q
    ||||||| ||||||| ||||| ||||  | ||||||||||||||||||| |||||||    
T  39138518 gacatgtatcgtgtccgacaccgacatatataattacactgaattatgtgattttct 39138462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 8e-39; HSPs: 117)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 123 - 260
Target Start/End: Original strand, 38078601 - 38078738
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||||||||| |||| ||||||||||| ||||||||| | | |||||||||||||| ||||| |||||||||||||||| |||||||||| |||||    
T  38078601 ctatgaagcacgaatactcctcggattaggcgtgtcctggtgttgaacatgtgtcgtgtccgacaccgacacttgtaattacattgaattatgtgatttt 38078700  T
Q  223 ctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
     |||||||||||||  ||||||||||| ||||||||||    
T  38078701 ttcaaattattagctgtgtcgacgtgtcagtgttcgtg 38078738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 124 - 234
Target Start/End: Original strand, 40258874 - 40258984
Alignment:
Q  124 tatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttc 223  Q
    ||||||||| | |||||| ||||||||||| ||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||     
T  40258874 tatgaagcatggacactcctcggattaggcgtgtcctggtgtcggacaggtgtcgtgtctgacaccgacacttgtaattacactgaattatgtgattttt 40258973  T
Q  224 tcaaattatta 234  Q
    |||||||||||    
T  40258974 tcaaattatta 40258984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 122 - 236
Target Start/End: Original strand, 22515826 - 22515940
Alignment:
Q  122 actatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattt 221  Q
    ||||||||||||| |||||| ||||||||||| ||||  ||| ||||| |||||||||||| ||||| |||||||||||||||||| |||||||| ||||    
T  22515826 actatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatatgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattt 22515925  T
Q  222 tctcaaattattagc 236  Q
    | |||||||||||||    
T  22515926 tttcaaattattagc 22515940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 123 - 233
Target Start/End: Complemental strand, 18337448 - 18337338
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||||||| |||||| |||||| ||||||||||  || ||||||| |||| ||||| ||||| ||||||||||||||||||||||||||| |||||    
T  18337448 ctatgaagcacggacactcctcggatcaggcatgtcccagtgtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 18337349  T
Q  223 ctcaaattatt 233  Q
     ||||||||||    
T  18337348 ttcaaattatt 18337338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 18190047 - 18190160
Alignment:
Q  122 actatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattt 221  Q
    |||||||||| |  |||||| ||||||||||  ||||| ||| ||||||| |||| ||||||||||  ||||||||||||||||||||||||||||||||    
T  18190047 actatgaagcgcatacactcctcggattaggtgtgtcccggtgtcggacacgtgttgtgtctgacatcgacacttgtaattacactgaattatgtaattt 18190146  T
Q  222 tctcaaattattag 235  Q
    | ||||||||||||    
T  18190147 tttcaaattattag 18190160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 122 - 260
Target Start/End: Original strand, 46348322 - 46348460
Alignment:
Q  122 actatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattt 221  Q
    ||||||||||||| |||| | |||||| |||| ||||  ||| ||||||| |||||||||| ||||| |||||||||||||||||| |||||| | ||||    
T  46348322 actatgaagcacggacacacctcggatcaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatatgattt 46348421  T
Q  222 tctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    | |||||||||||||  ||||| ||||| ||||| ||||    
T  46348422 tttcaaattattagctgtgtcggcgtgtcagtgtccgtg 46348460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 123 - 255
Target Start/End: Complemental strand, 36878585 - 36878448
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcc-----tggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgta 217  Q
    |||||||||||| |||||| | ||||||||| |||||     | || |||||||||| ||||||| ||||| ||||| | |||||||||||||||||||     
T  36878585 ctatgaagcacggacactcctgggattaggcgtgtccccgtgtcgtgtcggacatgtttcgtgtcagacaccgacacctataattacactgaattatgtg 36878486  T
Q  218 attttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    |||||||||||||||||||| ||||| ||||| |||||    
T  36878485 attttctcaaattattagcggtgtcggcgtgtcagtgt 36878448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 123 - 222
Target Start/End: Complemental strand, 1815376 - 1815277
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    ||||||| ||||  ||||| || |||||||| ||||| ||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||    
T  1815376 ctatgaatcacggtcactcctcagattaggcgtgtcccggtgtcggacatgtgtcgtgtcggacaccgacacttgtaattacactgaattatgtgatttt 1815277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 125 - 235
Target Start/End: Original strand, 42359391 - 42359501
Alignment:
Q  125 atgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttct 224  Q
    |||||||||| |||||| ||||||||||| ||||| ||| |||||||   ||| |||| ||||| ||||||||||||||||||||||| ||| ||||| |    
T  42359391 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacacgtcttgtccgacaccgacacttgtaattacactgaattttgtgatttttt 42359490  T
Q  225 caaattattag 235  Q
    |||||||||||    
T  42359491 caaattattag 42359501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 123 - 235
Target Start/End: Complemental strand, 51410144 - 51410031
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgt-aattt 221  Q
    |||||||||||||| |||| | ||||||||| ||||  ||| ||||| | |||||||||| ||||| ||||||||||||||||||||||||||| | |||    
T  51410144 ctatgaagcacgaatactccttggattaggcgtgtctcggtgtcggatacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 51410045  T
Q  222 tctcaaattattag 235  Q
    | ||||||||||||    
T  51410044 tttcaaattattag 51410031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 243
Target Start/End: Original strand, 5898206 - 5898326
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||| ||||||| |||||| ||||||||| | ||||| ||| | ||||| |||||||||||||||| ||| | | ||||||||||||||||||| |||||    
T  5898206 ctataaagcacggacactcctcggattagacgtgtcccggtgttggacacgtgtcgtgtctgacaccgacgcatataattacactgaattatgtgatttt 5898305  T
Q  223 ctcaaattattagcgatgtcg 243  Q
     ||| |||||||||| |||||    
T  5898306 ttcagattattagcggtgtcg 5898326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 235
Target Start/End: Complemental strand, 37598950 - 37598839
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||||||| |||||| ||||||||||| |||||   | ||||||| |||||||||| ||||| ||||||| ||||||||||||||| ||| |||||    
T  37598950 ctatgaagcacggacactcctcggattaggcgtgtcccattgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaatt-tgtgatttt 37598852  T
Q  223 ctcaaattattag 235  Q
     ||||||||||||    
T  37598851 ttcaaattattag 37598839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 41877464 - 41877530
Alignment:
Q  177 cgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcg 243  Q
    |||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  41877464 cgtgtccgacaccgacacttgtaattacactaaattatgtaattttctcaaattattagcggtgtcg 41877530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 120 - 236
Target Start/End: Original strand, 1486641 - 1486762
Alignment:
Q  120 tgactatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacact-----gacacttgtaattacactgaattat 214  Q
    |||| |||||||||  |||||| ||||||||||| ||||| ||| ||||||| |||||||||| |||||      ||||||| |||||||||||||||||    
T  1486641 tgaccatgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttataattacactgaattat 1486740  T
Q  215 gtaattttctcaaattattagc 236  Q
    || ||||| |||||||||||||    
T  1486741 gtgattttttcaaattattagc 1486762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 184 - 260
Target Start/End: Original strand, 5376501 - 5376577
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||| ||||||| ||||||||||||||||||| ||||||| |||||||||||| ||||| ||||||||||| ||||    
T  5376501 gacaccgacacttttaattacactgaattatgttattttcttaaattattagcggtgtcggcgtgttagtgtccgtg 5376577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 236
Target Start/End: Original strand, 5927281 - 5927393
Alignment:
Q  124 tatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttc 223  Q
    ||||||||||| |||||| || ||||||||||||   | | |||||||| |||| |||| |||||||||||||||||||||| | |||||| | |||||     
T  5927281 tatgaagcacggacactcctcagattaggcatgtttcgatgtcggacatttgtcatgtccgacactgacacttgtaattacattaaattatatgattttt 5927380  T
Q  224 tcaaattattagc 236  Q
    |||||||||||||    
T  5927381 tcaaattattagc 5927393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 260
Target Start/End: Original strand, 2896083 - 2896198
Alignment:
Q  145 ggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcga 244  Q
    ||||||||  ||||| ||| |||||||  ||||||||||||||| ||||  | ||  ||||||||||||||| |||||||||||||||||||| |||||     
T  2896083 ggattaggtgtgtcccggtctcggacacatgtcgtgtctgacaccgacatatatagctacactgaattatgtgattttctcaaattattagcggtgtcgg 2896182  T
Q  245 cgtgttagtgttcgtg 260  Q
    ||||| ||||| ||||    
T  2896183 cgtgtcagtgtccgtg 2896198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 137 - 236
Target Start/End: Complemental strand, 40181976 - 40181877
Alignment:
Q  137 cactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    ||||| ||||||||||| ||||| ||| | ||||| |||| ||||| ||||| || || | ||||||||||||||||||| |||||||||||||||||||    
T  40181976 cactcctcggattaggcgtgtcccggtgtaggacacgtgttgtgtccgacaccgatacatataattacactgaattatgtgattttctcaaattattagc 40181877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 6612172 - 6612222
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattatta 234  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  6612172 gacaccgacacttgtaattacactgaattatgtaattttttcaaattatta 6612222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 7918212 - 7918270
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtc 242  Q
    ||||||||||| | ||||||||||||||||||| |||||||||||||||||| ||||||    
T  7918212 gacactgacacatataattacactgaattatgtgattttctcaaattattagtgatgtc 7918270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 21530776 - 21530682
Alignment:
Q  155 tgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    |||||| || |||||||||||||||||| ||||| ||||||| |||||| ||  |||||| | ||||||||||||||||| || ||||| |||||    
T  21530776 tgtcctagtgtcggacatgtgtcgtgtccgacaccgacacttataattataccaaattatatgattttctcaaattattaacggtgtcggcgtgt 21530682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 235
Target Start/End: Original strand, 22881606 - 22881668
Alignment:
Q  173 gtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    |||||||||| ||||| |||||||||||||||||| |||||||| ||||| ||||||||||||    
T  22881606 gtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 22881668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 31015095 - 31015049
Alignment:
Q  190 gacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  31015095 gacacttgtaattacactgaattatgtgattttctcaaattattagc 31015049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 249
Target Start/End: Original strand, 43492434 - 43492560
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||||||  |  ||| ||||||||||| ||| | ||| |||||||||||| ||||||||||| |||||   ||||||||| |||||| || |||||    
T  43492434 ctatgaagcacatatgctcttcggattaggcgtgtgccggtgtcggacatgtgttgtgtctgacaccgacacacataattacaccgaattacgtgatttt 43492533  T
Q  223 ctcaaattattagcgatgtcgacgtgt 249  Q
    ||||||||| ||| | ||||| |||||    
T  43492534 ctcaaattactagtggtgtcggcgtgt 43492560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 255
Target Start/End: Original strand, 3490397 - 3490462
Alignment:
Q  190 gacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||  ||||| ||||| |||||    
T  3490397 gacacttgtaattacactgaataatgtagttttctcaaattattagcagtgtcggcgtgtcagtgt 3490462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 125 - 249
Target Start/End: Original strand, 16297223 - 16297349
Alignment:
Q  125 atgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgaca---ctgacacttgtaattacactgaattatgtaattt 221  Q
    |||||||||| |||||| ||||||||||| ||||||||| |||||||   |||||||| ||||   | |||| |||||||||||||||||| ||| ||||    
T  16297223 atgaagcacggacactcctcggattaggcgtgtcctggtgtcggacacacgtcgtgtccgacaccccggaca-ttgtaattacactgaattttgtgattt 16297321  T
Q  222 tctcaaattattagcgatgtcgacgtgt 249  Q
    | ||| |||||| ||  |||||||||||    
T  16297322 tttcatattatttgctgtgtcgacgtgt 16297349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 187 - 236
Target Start/End: Original strand, 37055860 - 37055909
Alignment:
Q  187 actgacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  37055860 actgatacttgtaattacactaaattatgtaattttctcaaattattagc 37055909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 194
Target Start/End: Complemental strand, 9828174 - 9828103
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacac 194  Q
    |||||||||||| |||||| ||||||||| | ||||| ||| ||||||| |||||||||||||||| |||||    
T  9828174 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacgtgtcgtgtctgacacggacac 9828103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 236
Target Start/End: Complemental strand, 21378635 - 21378584
Alignment:
Q  185 acactgacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    |||| ||||||||||||||||||||||||||||||||| |||| ||||||||    
T  21378635 acaccgacacttgtaattacactgaattatgtaattttttcaatttattagc 21378584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 24577187 - 24577238
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    ||||| ||||||||||||||||||||||||||| ||||| ||||||||||||    
T  24577187 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 24577238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 28674875 - 28674808
Alignment:
Q  167 ggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattatta 234  Q
    ||||| ||||||||||||||||  |||  | |||||| ||||||||||||||||||||||||||||||    
T  28674875 ggacaagtgtcgtgtctgacaccaacatatataattatactgaattatgtaattttctcaaattatta 28674808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 249
Target Start/End: Complemental strand, 113350 - 113292
Alignment:
Q  191 acacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||  ||||| |||||    
T  113350 acacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgt 113292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 260
Target Start/End: Original strand, 398780 - 398842
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||| ||||| ||||| ||||    
T  398780 taattacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgtg 398842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 243
Target Start/End: Complemental strand, 17754368 - 17754310
Alignment:
Q  185 acactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcg 243  Q
    |||||||||| | || |||||||||||||||||||||| |||||||||||||| |||||    
T  17754368 acactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgtcg 17754310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 249
Target Start/End: Original strand, 22907311 - 22907405
Alignment:
Q  155 tgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    |||||| || |||||||||||| |||||  |||| ||||||| |||||| ||  |||||| ||||||||||||||||||| ||  ||||||||||    
T  22907311 tgtcctagtgtcggacatgtgttgtgtcccacaccgacacttataattataccaaattatataattttctcaaattattaacggcgtcgacgtgt 22907405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 222
Target Start/End: Complemental strand, 26830701 - 26830608
Alignment:
Q  128 aagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    ||||||| |||||| || |||||||| ||||| ||||||| ||| |||| ||||||||||| ||||||| |||||||| | |||||||| |||||    
T  26830701 aagcacggacactcctctgattaggcgtgtcccggtatcgaacacgtgtagtgtctgacac-gacacttataattacatttaattatgtgatttt 26830608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 260
Target Start/End: Original strand, 6415001 - 6415078
Alignment:
Q  183 tgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    |||||| ||||| | |||||| |||| ||||||| |||||||||||| ||||||||||||| ||||| ||||| ||||    
T  6415001 tgacaccgacacatctaattaaactgtattatgtgattttctcaaataattagcgatgtcggcgtgtcagtgtccgtg 6415078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 255
Target Start/End: Original strand, 22794018 - 22794150
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtc-gtgtctgacactgacacttgtaattacactgaattatgtaattt 221  Q
    |||||||||||| |||||| ||| ||||||  ||||| ||  ||||||||| ||| ||||| ||||| ||||| | ||||||||||| ||||||| ||||    
T  22794018 ctatgaagcacgtacactcctcgaattaggtgtgtcccggagtcggacatgcgtcagtgtcggacac-gacacctataattacactgtattatgtcattt 22794116  T
Q  222 tctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    | ||||||||||| |  ||| ||||||| |||||    
T  22794117 tttcaaattattatccgtgttgacgtgtcagtgt 22794150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 234
Target Start/End: Complemental strand, 47989628 - 47989505
Alignment:
Q  122 actatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtc-----------tgacactgacacttgtaattacactgaa 210  Q
    ||||||||||||| |||||| ||||||||||| ||||| | | || |||||||||||||||            ||||| |||||||||||||||||||||    
T  47989628 actatgaagcacggacactcctcggattaggcgtgtcccgatgtcagacatgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaa 47989529  T
Q  211 ttatgtaattttctcaaattatta 234  Q
    |||||| ||||| | |||||||||    
T  47989528 ttatgtgatttttttaaattatta 47989505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 185 - 257
Target Start/End: Original strand, 10572591 - 10572663
Alignment:
Q  185 acactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttc 257  Q
    |||| ||||| | ||||||||| ||||||||| |||||||||||||||||| | ||||| ||||| |||||||    
T  10572591 acaccgacacatttaattacaccgaattatgtgattttctcaaattattagtggtgtcggcgtgtcagtgttc 10572663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 249
Target Start/End: Original strand, 19058850 - 19058922
Alignment:
Q  177 cgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    |||||| ||||| ||||||||||||||||||||||||||| || || | |||||||||||  ||||| |||||    
T  19058850 cgtgtccgacaccgacacttgtaattacactgaattatgttatctttttaaattattagctgtgtcggcgtgt 19058922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 123 - 260
Target Start/End: Original strand, 19562556 - 19562698
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttg------taattacactgaattatgt 216  Q
    ||||||||||||| ||||| ||||||||||  |||||  || ||||||| |||| || || ||||||||||| |       ||||||||||||| ||||     
T  19562556 ctatgaagcacga-cactcctcggattaggtgtgtccctgtgtcggacacgtgttgtatccgacactgacacctacacatataattacactgaactatga 19562654  T
Q  217 aattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
     |||||||||||||||||||  ||||| ||||| ||||||||||    
T  19562655 gattttctcaaattattagcagtgtcggcgtgtcagtgttcgtg 19562698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 23636044 - 23636096
Alignment:
Q  178 gtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaatt 230  Q
    ||||||||||| ||||| |  ||||||||||||||||||||||||||||||||    
T  23636044 gtgtctgacaccgacacatacaattacactgaattatgtaattttctcaaatt 23636096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 232
Target Start/End: Complemental strand, 25361944 - 25361896
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattat 232  Q
    ||||||||||| | ||||||||||||||||||| |||||||||||||||    
T  25361944 gacactgacacatataattacactgaattatgtgattttctcaaattat 25361896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 249
Target Start/End: Original strand, 29163323 - 29163447
Alignment:
Q  125 atgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttct 224  Q
    ||||||||||||||||  || |||||| | ||||| ||| || | || |||||||||| ||||| ||||| | |||||| | |||||||||| ||||||     
T  29163323 atgaagcacgaacacttctctgattagccgtgtcccggtgtcaggcacgtgtcgtgtccgacaccgacacatataattaaattgaattatgtgattttcc 29163422  T
Q  225 caaattattagcgatgtcgacgtgt 249  Q
     ||||| |||||| ||||| |||||    
T  29163423 taaatttttagcggtgtcggcgtgt 29163447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 34712384 - 34712436
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    ||||||||||| | |||||||||| |||||||| |||||||||||||||||||    
T  34712384 gacactgacacatataattacactaaattatgttattttctcaaattattagc 34712436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 38503378 - 38503302
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||| ||||| | ||||||||||||| ||| | |||||||||||||||||||| |||||  |||||||||| ||||    
T  38503378 gacaccgacacatataattacactgaaatatatgattttctcaaattattagcggtgtcggtgtgttagtgtccgtg 38503302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 1704993 - 1705044
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    ||||| ||||||||||||||| ||||||||||| ||||| ||||||||||||    
T  1704993 gacaccgacacttgtaattaccctgaattatgtgattttttcaaattattag 1705044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 182
Target Start/End: Complemental strand, 5944413 - 5944354
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtc 182  Q
    ||||||||||||||||||| ||||||||||| | ||| ||| |||||||||||| |||||    
T  5944413 ctatgaagcacgaacactcctcggattaggcgtatcccggtgtcggacatgtgttgtgtc 5944354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 182
Target Start/End: Complemental strand, 6427594 - 6427535
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtc 182  Q
    |||||||||||| ||||||||| |||||||| ||||| ||| ||||||| ||||||||||    
T  6427594 ctatgaagcacggacactcatcagattaggcgtgtcccggtgtcggacacgtgtcgtgtc 6427535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 255
Target Start/End: Original strand, 17831548 - 17831603
Alignment:
Q  200 attacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    |||||||||||| |||| |||||||||||||||||||| ||||| ||||| |||||    
T  17831548 attacactgaataatgtgattttctcaaattattagcggtgtcggcgtgtcagtgt 17831603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 243
Target Start/End: Original strand, 26238129 - 26238172
Alignment:
Q  200 attacactgaattatgtaattttctcaaattattagcgatgtcg 243  Q
    ||||||||||||||||| |||||||||||||||||||| |||||    
T  26238129 attacactgaattatgttattttctcaaattattagcggtgtcg 26238172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 31672889 - 31672948
Alignment:
Q  177 cgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    |||||| ||||| || ||||||||||||||||||||| || ||||| |||||||||||||    
T  31672889 cgtgtccgacaccgagacttgtaattacactgaattaagtgattttttcaaattattagc 31672948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 260
Target Start/End: Original strand, 32724104 - 32724175
Alignment:
Q  189 tgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    |||||| | |||||||| | |||||||||| ||||||||||||||| |||||||| ||| | ||||||||||    
T  32724104 tgacacatataattacattaaattatgtaaatttctcaaattattaacgatgtcggcgtatcagtgttcgtg 32724175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 198 - 260
Target Start/End: Complemental strand, 6427394 - 6427332
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    |||||||| |||||||||| |||||||||||||||||||| ||| | ||||| ||||| ||||    
T  6427394 taattacattgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccgtg 6427332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 199 - 249
Target Start/End: Original strand, 12443476 - 12443526
Alignment:
Q  199 aattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    |||||||||||||||||| |||||||||||||||||||  ||||| |||||    
T  12443476 aattacactgaattatgtgattttctcaaattattagctgtgtcggcgtgt 12443526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 125 - 236
Target Start/End: Complemental strand, 17778670 - 17778555
Alignment:
Q  125 atgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtc-------tgacactgacacttgtaattacactgaattatgta 217  Q
    ||||||||||||||||  ||||||||||||||||| ||| ||||||| |||||| | |        ||||| |||||||||||||||||||   |||||     
T  17778670 atgaagcacgaacacttctcggattaggcatgtcccggtgtcggacacgtgtcgcgacaccgacacgacaccgacacttgtaattacactg---tatgtg 17778574  T
Q  218 attttctcaaattattagc 236  Q
    ||||| |||||||||||||    
T  17778573 attttttcaaattattagc 17778555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 200 - 254
Target Start/End: Original strand, 20157367 - 20157421
Alignment:
Q  200 attacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtg 254  Q
    ||||||||||||||||| ||||||||| |||||||||| |||||| |||| ||||    
T  20157367 attacactgaattatgtgattttctcacattattagcggtgtcgatgtgtcagtg 20157421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 27471574 - 27471620
Alignment:
Q  191 acacttgtaattacactgaattatgtaattttctcaaattattagcg 237  Q
    |||| |||||||||||||||||||||  |||||||||||||||||||    
T  27471574 acacatgtaattacactgaattatgtgcttttctcaaattattagcg 27471620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 31694711 - 31694776
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaa--ttttctcaaattattagcgatgtcgacgt 247  Q
    ||||| |||||||||||||| |||||||||||| |  |||| ||||||||||||| ||||||||||    
T  31694711 gacaccgacacttgtaattatactgaattatgtgattttttttcaaattattagctatgtcgacgt 31694776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 48450594 - 48450640
Alignment:
Q  190 gacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    |||||||||||||||||| |||||||| ||||| |||||||||||||    
T  48450594 gacacttgtaattacactaaattatgttattttttcaaattattagc 48450640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 256
Target Start/End: Original strand, 609482 - 609531
Alignment:
Q  207 tgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgtt 256  Q
    ||||||||||||||||||||||||||||| | ||||| ||||| ||||||    
T  609482 tgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtt 609531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 1864882 - 1864931
Alignment:
Q  185 acactgacacttgtaattacactgaattatgtaattttctcaaattatta 234  Q
    |||| ||||| | ||||||||||||||||||| |||||||||||||||||    
T  1864882 acaccgacacatataattacactgaattatgtgattttctcaaattatta 1864931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 9629901 - 9629966
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    ||||| ||||||| |||| |||||||||||| | ||||| |||||||||||||| |||||| ||||    
T  9629901 gacaccgacacttataatcacactgaattatatgattttatcaaattattagcggtgtcgatgtgt 9629966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 11605943 - 11605996
Alignment:
Q  191 acacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcga 244  Q
    |||| ||||||| ||||||||||| | ||||| |||||||||||||||||||||    
T  11605943 acacatgtaatttcactgaattatatgattttttcaaattattagcgatgtcga 11605996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 255
Target Start/End: Original strand, 16927200 - 16927257
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    ||||||||||||||||| | ||||| ||||||||||||| ||| |||||||| |||||    
T  16927200 taattacactgaattatatgattttttcaaattattagctatgccgacgtgtcagtgt 16927257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 247
Target Start/End: Complemental strand, 19324606 - 19324557
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcgacgt 247  Q
    ||||||||||||||||||| ||||||||||||||| |||  |||||||||    
T  19324606 taattacactgaattatgtgattttctcaaattatcagcagtgtcgacgt 19324557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 237
Target Start/End: Complemental strand, 21038125 - 21038088
Alignment:
Q  200 attacactgaattatgtaattttctcaaattattagcg 237  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  21038125 attacactgaattatgtaattttcttaaattattagcg 21038088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 22947791 - 22947746
Alignment:
Q  190 gacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    |||||||||||| ||  |||||||||||||||||||||||||||||    
T  22947791 gacacttgtaataactttgaattatgtaattttctcaaattattag 22947746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 25098570 - 25098615
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcg 243  Q
    ||||||||||||||||||| ||||||||||||||| |||| |||||    
T  25098570 taattacactgaattatgtgattttctcaaattatcagcggtgtcg 25098615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 235
Target Start/End: Complemental strand, 34298480 - 34298443
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattag 235  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  34298480 taattacactgaattatgtgattttctcaaattattag 34298443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 237
Target Start/End: Complemental strand, 44482288 - 44482235
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcg 237  Q
    ||||| ||||| | ||||||||||||||||||| ||||||||||||||| ||||    
T  44482288 gacaccgacacatataattacactgaattatgtgattttctcaaattataagcg 44482235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 9709885 - 9709825
Alignment:
Q  177 cgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcg 237  Q
    |||||| ||||| ||||| | ||||||||  ||||||||| ||||||||||||||||||||    
T  9709885 cgtgtccgacaccgacacatataattacaacgaattatgtgattttctcaaattattagcg 9709825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 235
Target Start/End: Original strand, 14332634 - 14332694
Alignment:
Q  175 gtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    |||||||| ||||| || || | |||||||||| |||||||| ||||||||||||||||||    
T  14332634 gtcgtgtccgacaccgagacatataattacactaaattatgtgattttctcaaattattag 14332694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 242
Target Start/End: Original strand, 27965940 - 27966057
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||||| | |||||| ||||||||||| ||||| ||| || | || | | |||||||||||| ||||  | |||||||||||||||   | |||||    
T  27965940 ctatgaagcatggacactcctcggattaggcgtgtcccggtgtcaggcacgaggcgtgtctgacacggaca--tataattacactgaatttaatgatttt 27966037  T
Q  223 ctcaaattattagcgatgtc 242  Q
    |||||||| ||||| |||||    
T  27966038 ctcaaattgttagcaatgtc 27966057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 234
Target Start/End: Complemental strand, 33351737 - 33351685
Alignment:
Q  182 ctgacactgacacttgtaattacactgaattatgtaattttctcaaattatta 234  Q
    ||||||||||||| ||||||||||| ||| ||| | |||||||||||||||||    
T  33351737 ctgacactgacacatgtaattacaccgaagtattttattttctcaaattatta 33351685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 35702581 - 35702641
Alignment:
Q  176 tcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    ||||||| |||||||||||||||||||||||| |||||| | |  || |||||||||||||    
T  35702581 tcgtgtccgacactgacacttgtaattacacttaattatttgaagttttcaaattattagc 35702641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 6332728 - 6332678
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    ||||| || |||||||||||||||||||||||| ||||| ||||||||||||    
T  6332728 gacaccgatacttgtaattacactgaattatgtgatttt-tcaaattattag 6332678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 255
Target Start/End: Complemental strand, 13997957 - 13997870
Alignment:
Q  168 gacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    |||||||||||| ||  |||| ||||| | ||||||||||||||||||| ||||| | |||| |||| || ||||| ||||| |||||    
T  13997957 gacatgtgtcgtctccaacaccgacacatataattacactgaattatgtgatttttttaaataattaacggtgtcggcgtgtcagtgt 13997870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 14359529 - 14359587
Alignment:
Q  190 gacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    |||||||||||||||||| |||||||| ||||| |||||||||||||  ||||| |||||    
T  14359529 gacacttgtaattacactaaattatgtgatttt-tcaaattattagctgtgtcggcgtgt 14359587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 17007953 - 17008000
Alignment:
Q  175 gtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||| ||||||||||||||| |||| | ||||||||||||||||    
T  17007953 gtcgtgtccgacactgacacttgtgattatattgaattatgtaatttt 17008000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 236
Target Start/End: Original strand, 25452145 - 25452201
Alignment:
Q  178 gtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    ||||||||||| ||||| |  |||||||||||||||||  |||||||||||||||||||    
T  25452145 gtgtctgacaccgacacat--aattacactgaattatgagattttctcaaattattagc 25452201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 28273089 - 28273140
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    ||||| ||||||||||||||||||||||||| | ||||| |||||| |||||    
T  28273089 gacaccgacacttgtaattacactgaattatatgattttttcaaatgattag 28273140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 182
Target Start/End: Complemental strand, 40917879 - 40917820
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtc 182  Q
    |||||||||||| ||| || ||||||||||| ||||| ||| ||||||| ||||||||||    
T  40917879 ctatgaagcacggacagtcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtc 40917820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 260
Target Start/End: Complemental strand, 52903314 - 52903231
Alignment:
Q  177 cgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    |||||| ||||| ||||| | ||||||||||||||||| | ||||| | ||||||||| || | ||| ||||||||||| ||||    
T  52903314 cgtgtccgacaccgacacatataattacactgaattatatgattttattaaattattaacggtatcggcgtgttagtgtccgtg 52903231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 260
Target Start/End: Complemental strand, 1262928 - 1262866
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    |||||| | |||||||||| |||||||||||||||||||  ||||| |||||  |||||||||    
T  1262928 taattatattgaattatgtgattttctcaaattattagctgtgtcggcgtgtccgtgttcgtg 1262866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 249
Target Start/End: Complemental strand, 3921726 - 3921660
Alignment:
Q  183 tgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    ||||||||||||   | |||||| |||||||||| |||||||||||||||||  ||||| |||||||    
T  3921726 tgacactgacacgcatgattacattgaattatgtcattttctcaaattattattgatgttgacgtgt 3921660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 8010294 - 8010340
Alignment:
Q  190 gacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    ||||||| |||||| |||||||||| ||||||| |||||||||||||    
T  8010294 gacacttataattatactgaattatataattttttcaaattattagc 8010340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 160
Target Start/End: Original strand, 9630560 - 9630598
Alignment:
Q  122 actatgaagcacgaacactcatcggattaggcatgtcct 160  Q
    |||||||||||||||||||| ||||||||||| ||||||    
T  9630560 actatgaagcacgaacactcctcggattaggcgtgtcct 9630598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 255
Target Start/End: Original strand, 9690213 - 9690344
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtc-gtgtctgacactgacacttgtaattacactgaattatgtaattt 221  Q
    ||||||||||| |||||||  |||||||||| ||||| ||| ||||||| ||||| ||| | ||| | ||||| | | ||||||||||||  ||| ||||    
T  9690213 ctatgaagcacaaacactctccggattaggcgtgtcccggtgtcggacacgtgtcagtggccgacgccgacacatatgattacactgaat--tgtgattt 9690310  T
Q  222 tctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    |||||  ||||||||| ||||  ||||| |||||    
T  9690311 tctcagtttattagcggtgtcagcgtgtcagtgt 9690344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 249
Target Start/End: Complemental strand, 9828087 - 9828037
Alignment:
Q  199 aattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    |||||||||||||||||| ||||| |||||||||||| | ||||| |||||    
T  9828087 aattacactgaattatgtgattttatcaaattattagtggtgtcggcgtgt 9828037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 10233310 - 10233260
Alignment:
Q  185 acactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    |||| ||||| | ||||||||||||||||||| |||||||||| |||||||    
T  10233310 acacagacacatataattacactgaattatgtgattttctcaatttattag 10233260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 249
Target Start/End: Original strand, 10474997 - 10475043
Alignment:
Q  203 acactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    |||||||||||||| |||||||||| ||||||||| ||||| |||||    
T  10474997 acactgaattatgtgattttctcaagttattagcggtgtcggcgtgt 10475043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 260
Target Start/End: Original strand, 13011223 - 13011293
Alignment:
Q  191 acacttgtaattacactgaattatgt-aattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||||||||||||||| |||||||| | |||| |||||||||||||  ||||| | ||| ||||||||||    
T  13011223 acacttgtaattacacttaattatgtgatttttttcaaattattagctgtgtcggcatgtcagtgttcgtg 13011293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 255
Target Start/End: Complemental strand, 13436523 - 13436445
Alignment:
Q  177 cgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    |||||| |||||  |||| | ||||||||||||||||||| |||| || |||||||||||  ||||| |||||| ||||    
T  13436523 cgtgtccgacaccaacacatataattacactgaattatgtgatttccttaaattattagcagtgtcggcgtgttcgtgt 13436445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 254
Target Start/End: Complemental strand, 21057825 - 21057771
Alignment:
Q  200 attacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtg 254  Q
    |||||| | |||||||| ||||||| |||||||||||| ||||||||||| ||||    
T  21057825 attacattcaattatgttattttctaaaattattagcggtgtcgacgtgtcagtg 21057771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 215
Target Start/End: Original strand, 24334699 - 24334737
Alignment:
Q  177 cgtgtctgacactgacacttgtaattacactgaattatg 215  Q
    |||||| ||||| ||||||||||||||||||||||||||    
T  24334699 cgtgtccgacaccgacacttgtaattacactgaattatg 24334737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 230
Target Start/End: Complemental strand, 25272540 - 25272494
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaatt 230  Q
    ||||| ||||||| |||||||||| |||||||| |||||||||||||    
T  25272540 gacaccgacacttataattacactaaattatgtgattttctcaaatt 25272494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 26526686 - 26526740
Alignment:
Q  124 tatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcg 178  Q
    |||||||||||||||||||||| || || | ||||||| ||||||||||| ||||    
T  26526686 tatgaagcacgaacactcatcgaatcagacgtgtcctgatatcggacatgagtcg 26526740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 29144365 - 29144411
Alignment:
Q  190 gacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    ||||||||||||||||||| ||||| || |||| |||||||||||||    
T  29144365 gacacttgtaattacactgcattatctatttttttcaaattattagc 29144411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Original strand, 30173763 - 30173801
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaatttt 222  Q
    ||||| |||||||||||||||||||| ||||||||||||    
T  30173763 gacaccgacacttgtaattacactgagttatgtaatttt 30173801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 32434718 - 32434768
Alignment:
Q  185 acactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    |||| |||||||||||||||| |||||||||| | ||| ||||||||||||    
T  32434718 acacagacacttgtaattacaatgaattatgtgactttttcaaattattag 32434768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 242
Target Start/End: Complemental strand, 34371771 - 34371714
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtc 242  Q
    ||||| ||||| | ||||||||||||||||||| |||||||| ||||||||||| ||||    
T  34371771 gacaccgacacatataattacactgaattatgtgattttctc-aattattagcggtgtc 34371714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #104
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 2851059 - 2851026
Alignment:
Q  204 cactgaattatgtaattttctcaaattattagcg 237  Q
    ||||||||||||||||||| ||||||||||||||    
T  2851059 cactgaattatgtaattttatcaaattattagcg 2851026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #105
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 14248900 - 14248837
Alignment:
Q  168 gacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    ||||||| ||||||| |||||||||||   ||||||||||||||||||  ||||| ||||||||||||    
T  14248900 gacatgtatcgtgtccgacactgacac--ataattacactgaattatg--attttttcaaattattag 14248837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #106
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 247
Target Start/End: Original strand, 18556021 - 18556090
Alignment:
Q  178 gtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgt 247  Q
    ||||||||||||||||| ||| |||||| | |||||||| ||||| | ||||||||| || ||| |||||    
T  18556021 gtgtctgacactgacacatgtgattacagtcaattatgtcattttattaaattattaccggtgttgacgt 18556090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #107
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 23714719 - 23714764
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcg 243  Q
    |||||||||| ||||||||||||||||| |||| |||||| |||||    
T  23714719 taattacacttaattatgtaattttctctaatttttagcggtgtcg 23714764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #108
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 243
Target Start/End: Original strand, 39953141 - 39953206
Alignment:
Q  178 gtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcg 243  Q
    ||||| ||||| ||||| |  ||||||||| |||||||| ||||||| |||||||||||| |||||    
T  39953141 gtgtccgacaccgacacatacaattacactaaattatgtgattttctaaaattattagcggtgtcg 39953206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #109
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 40747779 - 40747824
Alignment:
Q  189 tgacacttgtaattacactgaattatgtaattttctcaaattatta 234  Q
    |||||| | |||||||| |||||||||| |||||||||||||||||    
T  40747779 tgacacctataattacattgaattatgtcattttctcaaattatta 40747824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #110
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 234
Target Start/End: Complemental strand, 42325601 - 42325568
Alignment:
Q  201 ttacactgaattatgtaattttctcaaattatta 234  Q
    |||||||||||||||| |||||||||||||||||    
T  42325601 ttacactgaattatgtcattttctcaaattatta 42325568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #111
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 182
Target Start/End: Complemental strand, 6427635 - 6427595
Alignment:
Q  142 atcggattaggcatgtcctggtatcggacatgtgtcgtgtc 182  Q
    |||||||||||| ||||| ||||||||||| ||||||||||    
T  6427635 atcggattaggcgtgtcccggtatcggacacgtgtcgtgtc 6427595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #112
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 260
Target Start/End: Original strand, 6936417 - 6936477
Alignment:
Q  200 attacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    |||||||| |||||||| ||||||||| ||||||| |  ||| || |||||||||||||||    
T  6936417 attacacttaattatgtcattttctcagattattatccgtgttgatgtgttagtgttcgtg 6936477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #113
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 255
Target Start/End: Complemental strand, 23622373 - 23622305
Alignment:
Q  187 actgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    |||||||| | |||||||||||| |||||| ||||| | ||| |||||| | ||||| |||||||||||    
T  23622373 actgacacatttaattacactgagttatgtgatttttttaaactattagtggtgtcggcgtgttagtgt 23622305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #114
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 234
Target Start/End: Original strand, 24176382 - 24176418
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattatta 234  Q
    |||||||||||||| |||| |||||||||||||||||    
T  24176382 taattacactgaatgatgttattttctcaaattatta 24176418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #115
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 32461471 - 32461515
Alignment:
Q  191 acacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    ||||||||||||||| | |||||||| ||||| ||||||||||||    
T  32461471 acacttgtaattacattaaattatgtgattttttcaaattattag 32461515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #116
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 234
Target Start/End: Original strand, 39101197 - 39101233
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattatta 234  Q
    |||||||||| |||||||| |||||||||||||||||    
T  39101197 taattacacttaattatgttattttctcaaattatta 39101233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #117
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 171
Target Start/End: Original strand, 46940748 - 46940796
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggaca 171  Q
    ||||||||||||||||||| ||||||||||| ||| | ||| |||||||    
T  46940748 ctatgaagcacgaacactcctcggattaggcgtgttccggtgtcggaca 46940796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 126 - 234
Target Start/End: Complemental strand, 70394 - 70286
Alignment:
Q  126 tgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctc 225  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||| ||||||| ||||||||||||||||||| ||||| ||    
T  70394 tgaagcacgaacactcatcggattaggcatgtcctggtgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaattatgttattttttc 70295  T
Q  226 aaattatta 234  Q
    |||||||||    
T  70294 aaattatta 70286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 5e-37; HSPs: 109)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 122 - 260
Target Start/End: Complemental strand, 28152218 - 28152081
Alignment:
Q  122 actatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattt 221  Q
    |||||||||||||||||||| ||||||||||| ||||| ||| ||||||| |||||||||| ||||| ||||||||||||||||||||||||||| ||||    
T  28152218 actatgaagcacgaacactcctcggattaggcctgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattt 28152119  T
Q  222 tctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    | |||||||||||||  ||||| ||||| ||||| ||||    
T  28152118 t-tcaaattattagctttgtcggcgtgtcagtgtccgtg 28152081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 123 - 235
Target Start/End: Complemental strand, 34595253 - 34595141
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||||||| |||||| ||||||||||  ||||| ||| || |||| |||||||||| ||||| ||||||||||||||||||||||||||| |||||    
T  34595253 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 34595154  T
Q  223 ctcaaattattag 235  Q
     ||||||||||||    
T  34595153 ttcaaattattag 34595141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 123 - 236
Target Start/End: Complemental strand, 28715414 - 28715301
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||||||| |||||  ||| ||||||| ||||| ||| ||| ||| |||||||||| ||||| ||||||||||||||||||||||||||| |||||    
T  28715414 ctatgaagcacgtacacttctcgaattaggcgtgtcccggtgtcgaacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtcatttt 28715315  T
Q  223 ctcaaattattagc 236  Q
     |||||||||||||    
T  28715314 ttcaaattattagc 28715301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 123 - 236
Target Start/End: Complemental strand, 4878061 - 4877948
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgt-aattt 221  Q
    |||||||||||| |||||| ||||||||||| ||||||| | |||||||||||||||||| ||||| |||||||||||||| ||| |||||||| | |||    
T  4878061 ctatgaagcacggacactcctcggattaggcgtgtcctg-tgtcggacatgtgtcgtgtccgacaccgacacttgtaattatacttaattatgtgacttt 4877963  T
Q  222 tctcaaattattagc 236  Q
    | |||||||||||||    
T  4877962 tttcaaattattagc 4877948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 125 - 255
Target Start/End: Original strand, 7265535 - 7265665
Alignment:
Q  125 atgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttct 224  Q
    |||||||||| || ||| ||||||||||||| | | ||| |||||||||| | ||||| ||||| ||||| | ||||||||||||||||||| |||||||    
T  7265535 atgaagcacggacgctcctcggattaggcatattccggtgtcggacatgtattgtgtccgacaccgacacatataattacactgaattatgtgattttct 7265634  T
Q  225 caaattattagcgatgtcgacgtgttagtgt 255  Q
    ||||||||||||| ||| | ||||| |||||    
T  7265635 caaattattagcggtgttggcgtgtcagtgt 7265665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 123 - 249
Target Start/End: Original strand, 7977770 - 7977896
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    ||||||||||||||||||| |  |||||||| |||   | | |||||||| ||| ||||| ||||| |||||||||||||||||||||||||||||||||    
T  7977770 ctatgaagcacgaacactccttagattaggcgtgtttcgttgtcggacatatgttgtgtccgacaccgacacttgtaattacactgaattatgtaatttt 7977869  T
Q  223 ctcaaattattagcgatgtcgacgtgt 249  Q
     |||||||||||||  ||||| |||||    
T  7977870 ttcaaattattagctgtgtcggcgtgt 7977896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 122 - 255
Target Start/End: Complemental strand, 24645601 - 24645467
Alignment:
Q  122 actatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgt-aatt 220  Q
    ||||||||||||  |||||| ||||||||| | |||| |||| ||||||| |||||||||||||||| ||||||||||| || |||||||||||| | ||    
T  24645601 actatgaagcacagacactcttcggattagacgtgtcttggtgtcggacacgtgtcgtgtctgacaccgacacttgtaactatactgaattatgtgattt 24645502  T
Q  221 ttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    || |||||||||||||  ||||||| ||| |||||    
T  24645501 ttttcaaattattagctgtgtcgacatgtcagtgt 24645467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 259
Target Start/End: Original strand, 13360312 - 13360448
Alignment:
Q  122 actatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattt 221  Q
    ||||||||||||| |||||| ||||||||||| ||||   || |||||||| ||| ||||||||||| || || | ||||||||||||||||||| ||||    
T  13360312 actatgaagcacggacactcttcggattaggcgtgtctcagtgtcggacat-tgttgtgtctgacaccgaaacatataattacactgaattatgtgattt 13360410  T
Q  222 tctcaaattattagcgatgtcgacgtgttagtgttcgt 259  Q
    |||||||||| ||| | |||||||||||  ||||||||    
T  13360411 tctcaaattactagtggtgtcgacgtgtctgtgttcgt 13360448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 123 - 235
Target Start/End: Original strand, 6898221 - 6898333
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    ||||||||||||||||||||||||||||||| |||   ||| | ||||| |  ||||||| ||||| |||||||||||||||||| |||||||||||||     
T  6898221 ctatgaagcacgaacactcatcggattaggcgtgtttcggtgttggacacgcttcgtgtccgacaccgacacttgtaattacacttaattatgtaatttg 6898320  T
Q  223 ctcaaattattag 235  Q
     ||||||||||||    
T  6898321 ttcaaattattag 6898333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 123 - 235
Target Start/End: Original strand, 10770607 - 10770726
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggaca--tgtgtcgtgtctgacact-----gacacttgtaattacactgaattatg 215  Q
    |||||||||||| |||||| || |||||||||||||| || ||||||||  |||||||||||||||||      ||||||||||||||||||||||||||    
T  10770607 ctatgaagcacggacactcctcagattaggcatgtcccggcatcggacacgtgtgtcgtgtctgacacgacaccgacacttgtaattacactgaattatg 10770706  T
Q  216 taattttctcaaattattag 235  Q
    | ||||| ||||||||||||    
T  10770707 tgattttttcaaattattag 10770726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 124 - 260
Target Start/End: Original strand, 17841530 - 17841666
Alignment:
Q  124 tatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttc 223  Q
    ||||||||||| |||||| ||||||||||| ||||   || |||||||  ||||||||| ||||| | |||||||||||||||| |||||||| |||||     
T  17841530 tatgaagcacggacactcctcggattaggcgtgtctcagtgtcggacacatgtcgtgtccgacaccgtcacttgtaattacactaaattatgtgattttt 17841629  T
Q  224 tcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    |||||||||||||  ||||| ||||| ||||| ||||    
T  17841630 tcaaattattagctgtgtcggcgtgtcagtgtccgtg 17841666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 169 - 259
Target Start/End: Complemental strand, 19040425 - 19040335
Alignment:
Q  169 acatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgt 259  Q
    |||||||||||||| ||||| ||||| | ||||||||||||||||||| |||||||||||||||||||| ||||| ||||| ||| |||||    
T  19040425 acatgtgtcgtgtccgacacagacacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtattcgt 19040335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 12696382 - 12696306
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||| ||||| ||||| ||||    
T  12696382 gacactgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 12696306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 235
Target Start/End: Complemental strand, 16833427 - 16833315
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||| ||  |||||| ||||||| ||  ||||||||| ||||||  ||||||||||| |||| ||||||||||||||||||||| ||||| |||||    
T  16833427 ctatgaagtacagacactcctcggattcggtgtgtcctggtgtcggacgcgtgtcgtgtctaacaccgacacttgtaattacactgaagtatgtgatttt 16833328  T
Q  223 ctcaaattattag 235  Q
     ||||||||||||    
T  16833327 ttcaaattattag 16833315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 249
Target Start/End: Original strand, 32978842 - 32978966
Alignment:
Q  126 tgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgt-aattttct 224  Q
    ||||||||| |||||| | ||||||| | ||||| ||| |||||||||||||||||| ||||| |||||||||||||||||| ||||||||   |||| |    
T  32978842 tgaagcacggacactccttggattagacgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacacttaattatgtgtttttttt 32978941  T
Q  225 caaattattagcgatgtcgacgtgt 249  Q
    ||||||||||||  ||||| |||||    
T  32978942 caaattattagctgtgtcggcgtgt 32978966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 124 - 260
Target Start/End: Complemental strand, 9658998 - 9658861
Alignment:
Q  124 tatgaagcacgaacactcatcgga-ttaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    ||||||||||| |||||| | ||| |||||| ||| | ||| || |||| ||||||||||| |||| ||||  | ||||||||||||||||||| |||||    
T  9658998 tatgaagcacggacactccttggaattaggcgtgttccggtgtcagacacgtgtcgtgtctaacaccgacaaatataattacactgaattatgtgatttt 9658899  T
Q  223 ctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    || |||||||||||| ||||| ||||| ||||| ||||    
T  9658898 cttaaattattagcggtgtcggcgtgtcagtgtccgtg 9658861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 260
Target Start/End: Complemental strand, 17435256 - 17435181
Alignment:
Q  185 acactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||| |||||||||||||||||||||||||||||||| | ||||||||||| |||||||||| | ||||| ||||    
T  17435256 acactaacacttgtaattacactgaattatgtaattttttaaaattattagctatgtcgacgtatcagtgtccgtg 17435181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 125 - 193
Target Start/End: Original strand, 5000557 - 5000625
Alignment:
Q  125 atgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgaca 193  Q
    ||||||||||||||||| ||||||||| | ||||||||| ||||| |||||||||||||||||| ||||    
T  5000557 atgaagcacgaacactcttcggattagacgtgtcctggtgtcggatatgtgtcgtgtctgacaccgaca 5000625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 260
Target Start/End: Original strand, 9107371 - 9107447
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||| ||||||||||||||||||||||| ||| ||||| |||||||||||||  ||||| ||||||||||| ||||    
T  9107371 gacaccgacacttgtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtg 9107447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 260
Target Start/End: Original strand, 15489733 - 15489809
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||| |||||||||||||||| |||||| ||||||||| ||||||||||||   ||||||||||||||||| ||||    
T  15489733 gacaccgacacttgtaattacattgaattgtgtaattttttcaaattattagttgtgtcgacgtgttagtgtccgtg 15489809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 242
Target Start/End: Original strand, 32511605 - 32511725
Alignment:
Q  122 actatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattt 221  Q
    ||||||||||||| |||||| || |||||||| ||  | | | || ||||| |||||| || |||||  |||||| ||||||||||||||||||| ||||    
T  32511605 actatgaagcacggacactcctccgattaggcgtgctccgatgtcagacatatgtcgtatccgacaccaacacttataattacactgaattatgtgattt 32511704  T
Q  222 tctcaaattattagcgatgtc 242  Q
    ||| |||||||||||| ||||    
T  32511705 tcttaaattattagcggtgtc 32511725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 260
Target Start/End: Complemental strand, 13851801 - 13851718
Alignment:
Q  177 cgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    |||||| ||||  ||||| | |||||||||||||||| || |||||||||||||||||||| ||||||||||| ||||| ||||    
T  13851801 cgtgtcagacatcgacacatataattacactgaattacgttattttctcaaattattagcggtgtcgacgtgtcagtgtccgtg 13851718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 16766755 - 16766684
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    ||||| ||||||||||||||||||||||||||| ||||| |||||||||||||  ||||| ||||| |||||    
T  16766755 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 16766684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 31384978 - 31384927
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  31384978 gacactgacacttgtaattacactgaattatgtgattttttcaaattattag 31384927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 258
Target Start/End: Original strand, 7801157 - 7801231
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcg 258  Q
    ||||| ||||||||||||||| ||||||||||| ||||| ||||||||||||   ||||| ||||||||||||||    
T  7801157 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggcgtgttagtgttcg 7801231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 260
Target Start/End: Original strand, 8776908 - 8777050
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtct-----gacactgacacttgtaattacactgaattatgta 217  Q
    |||||||||||| |||||| ||||||||||  ||||  ||| ||||||| ||||||||||      |||||  |||||||||||||||||||||| |||     
T  8776908 ctatgaagcacggacactcctcggattaggtgtgtctcggtgtcggacacgtgtcgtgtcgtgtccgacaccaacacttgtaattacactgaattttgtg 8777007  T
Q  218 attttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||| ||||||||||||   ||||| ||||| ||||| ||||    
T  8777008 attttttcaaattattagttgtgtcggcgtgtcagtgtccgtg 8777050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 123 - 232
Target Start/End: Original strand, 13364645 - 13364754
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||||||  |||||| ||||| ||| | ||||||||| || ||||||| |||||||  |||| ||||| | | ||||||||||||||| | |||||    
T  13364645 ctatgaagcacagacactcgtcggaatagacgtgtcctggtgtcagacatgtatcgtgtccaacaccgacacatatgattacactgaattatatgatttt 13364744  T
Q  223 ctcaaattat 232  Q
    ||||||||||    
T  13364745 ctcaaattat 13364754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 243
Target Start/End: Complemental strand, 7378098 - 7377978
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||||||| |||||  || |||||| | ||||| ||| |||||    ||||||||| ||||| ||||| | |||||||| |||||||||| |||||    
T  7378098 ctatgaagcacggacacttctcagattagccgtgtcccggtgtcggatgcatgtcgtgtccgacaccgacacatataattacattgaattatgtgatttt 7377999  T
Q  223 ctcaaattattagcgatgtcg 243  Q
    |||||||| |||||| |||||    
T  7377998 ctcaaatttttagcggtgtcg 7377978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 234
Target Start/End: Original strand, 31579211 - 31579276
Alignment:
Q  167 ggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattatta 234  Q
    |||||||||||||||| ||||| ||||| |  |||||||||||||||||| |||||||||||||||||    
T  31579211 ggacatgtgtcgtgtccgacaccgacacat--aattacactgaattatgtgattttctcaaattatta 31579276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 32298549 - 32298661
Alignment:
Q  125 atgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttct 224  Q
    |||||||| |||||||||||  ||||||| ||| ||||| | |||||| |||| ||||||||||  |||| | |||||||||| |||||||| ||  |||    
T  32298549 atgaagcatgaacactcatcaaattaggcgtgttctggtgttggacatatgtcatgtctgacaccaacacatataattacactaaattatgtgatgatct 32298648  T
Q  225 caaattattagcg 237  Q
     ||||||||||||    
T  32298649 taaattattagcg 32298661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 233
Target Start/End: Complemental strand, 7740733 - 7740650
Alignment:
Q  150 aggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattatt 233  Q
    |||| ||||||||||||||  | |||||||||| ||||||||||| | |||||||||| |||| ||| |||||| |||||||||    
T  7740733 aggcgtgtcctggtatcgggtacgtgtcgtgtccgacactgacacatataattacactcaattttgtgattttcacaaattatt 7740650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 25038078 - 25038137
Alignment:
Q  190 gacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    |||| ||||||||||||| |||||||||||||||||||||||||| || |||| ||||||    
T  25038078 gacatttgtaattacactaaattatgtaattttctcaaattattaacggtgtcaacgtgt 25038137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 260
Target Start/End: Complemental strand, 15443739 - 15443677
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    |||||| | |||||||||| |||||||||||||||||  ||||||||||||| ||||||||||    
T  15443739 taattatattgaattatgttattttctcaaattattattgatgtcgacgtgtcagtgttcgtg 15443677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 17341669 - 17341735
Alignment:
Q  188 ctgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtg 254  Q
    ||||||||| ||||||||||||||||||| ||||| ||||||||||| || ||||| ||||| ||||    
T  17341669 ctgacacttataattacactgaattatgtgattttatcaaattattaacggtgtcggcgtgtcagtg 17341735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 260
Target Start/End: Complemental strand, 31959211 - 31959141
Alignment:
Q  190 gacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||||||||||||||||| ||||||| ||||| |||||||||||||  || || ||||| ||||||||||    
T  31959211 gacacttgtaattacactgcattatgtgattttttcaaattattagctgtgacggcgtgtcagtgttcgtg 31959141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 249
Target Start/End: Original strand, 33001229 - 33001355
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    ||||||||||| ||||||| | ||||||||| | |   ||| || |||| |||||||||| ||||| ||||| | |||||||| | |||||||| |||||    
T  33001229 ctatgaagcacaaacactctttggattaggcgtatttcggtgtcagacacgtgtcgtgtccgacaccgacacatataattacatttaattatgtgatttt 33001328  T
Q  223 ctcaaattattagcgatgtcgacgtgt 249  Q
     |||||||||||||  ||||| |||||    
T  33001329 ttcaaattattagcagtgtcggcgtgt 33001355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 256
Target Start/End: Complemental strand, 1532284 - 1532224
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcg--atgtcgacgtgttagtgtt 256  Q
    ||||||||||||||||||||||||| ||||||||||||||   ||||||||||| ||||||    
T  1532284 taattacactgaattatgtaattttatcaaattattagcggtgtgtcgacgtgtcagtgtt 1532224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 255
Target Start/End: Complemental strand, 1681810 - 1681745
Alignment:
Q  190 gacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    |||||||||||||||||||||||| || ||||| ||||||||||||   ||||| |||||||||||    
T  1681810 gacacttgtaattacactgaattacgtgattttttcaaattattagttgtgtcggcgtgttagtgt 1681745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 256
Target Start/End: Original strand, 4859113 - 4859186
Alignment:
Q  183 tgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgtt 256  Q
    |||||||||||| ||| |||||| || ||||||| |||||||||||||||||  | ||||||| ||||||||||    
T  4859113 tgacactgacacgtgtgattacattggattatgtcattttctcaaattattattggtgtcgacatgttagtgtt 4859186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 20370476 - 20370533
Alignment:
Q  179 tgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    |||||||||||||||||| ||  |||| |||| |||||||||||||||||||||||||    
T  20370476 tgtctgacactgacacttatacctacattgaaatatgtaattttctcaaattattagc 20370533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 237
Target Start/End: Original strand, 21395309 - 21395361
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcg 237  Q
    ||||| |||||||||||||||||| |||||||| ||||||||||||||||||||    
T  21395309 gacaccgacacttgtaattacactaaattatgt-attttctcaaattattagcg 21395361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 198 - 234
Target Start/End: Original strand, 7569183 - 7569219
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattatta 234  Q
    |||||||||||||||||||||||||||||||||||||    
T  7569183 taattacactgaattatgtaattttctcaaattatta 7569219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 9025495 - 9025547
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    ||||| ||||| | ||||||||||||||||||| |||||||||||||||||||    
T  9025495 gacaccgacacatataattacactgaattatgtgattttctcaaattattagc 9025547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 9027236 - 9027160
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||| ||||| | ||||||||| ||||||||| ||| |||||||||||||||| ||||| ||||| ||||| ||||    
T  9027236 gacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtcggcgtgtcagtgtccgtg 9027160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 123 - 257
Target Start/End: Original strand, 10339054 - 10339200
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctga-----------cactgacacttgtaatt-acactgaa 210  Q
    |||||||||||| |||||| || |||||||| |||||  || |||||||||||||||||| ||           ||||||||| | ||||| ||||||||    
T  10339054 ctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaccgacacggcactgacacatataattaacactgaa 10339153  T
Q  211 ttatgtaattttctcaaattattagcgatgtcgacgtgttagtgttc 257  Q
    |||||| |||||||||||||| | ||| ||||| ||||| |||||||    
T  10339154 ttatgtgattttctcaaattaatcgcggtgtcggcgtgtcagtgttc 10339200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 260
Target Start/End: Original strand, 426508 - 426591
Alignment:
Q  177 cgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    |||||| ||||| |||||||||||||||| | |||||||| ||||| ||||||||||| |  ||||| ||||| ||||| ||||    
T  426508 cgtgtccgacaccgacacttgtaattacatttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtg 426591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 853812 - 853911
Alignment:
Q  136 acactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    |||||||| ||||||||| ||||    | |||||||  |||||| || ||||| ||||||||||||| |||| |||||||| ||||| ||||||||||||    
T  853812 acactcattggattaggcgtgtctctatgtcggacacatgtcgtatccgacaccgacacttgtaattgcacttaattatgtgattttttcaaattattag 853911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 194
Target Start/End: Complemental strand, 3209518 - 3209447
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacac 194  Q
    ||||||||||| ||||||| ||||||||||| ||||| ||| ||||||  |||||||||  |||||||||||    
T  3209518 ctatgaagcacaaacactcctcggattaggcgtgtccgggtgtcggacgcgtgtcgtgttcgacactgacac 3209447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 241
Target Start/End: Original strand, 34073362 - 34073405
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgt 241  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  34073362 taattacactgaattatgagattttctcaaattattagcgatgt 34073405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 234
Target Start/End: Original strand, 403849 - 403915
Alignment:
Q  168 gacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattatta 234  Q
    |||| ||| |||||| ||||| |||||||||| ||||||| |||||||| ||||| |||||||||||    
T  403849 gacaggtgacgtgtccgacaccgacacttgtagttacactaaattatgtgattttttcaaattatta 403915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 255
Target Start/End: Original strand, 5732504 - 5732582
Alignment:
Q  177 cgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    |||||| ||||| ||||| | |||||||||| || ||||| ||||||||||||||||| || ||||| ||||| |||||    
T  5732504 cgtgtccgacaccgacacatataattacactaaaatatgtgattttctcaaattattaacggtgtcggcgtgtcagtgt 5732582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 5970120 - 5970174
Alignment:
Q  195 ttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    |||||||||||||||||||||| ||||| ||||||||||| |  |||||||||||    
T  5970120 ttgtaattacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 5970174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 9522948 - 9522898
Alignment:
Q  185 acactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    |||| ||||||||||||||||||||||||||| ||||| | ||||||||||    
T  9522948 acaccgacacttgtaattacactgaattatgtgatttttttaaattattag 9522898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 123 - 228
Target Start/End: Original strand, 17327590 - 17327700
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtc-----tgacactgacacttgtaattacactgaattatgta 217  Q
    |||||||||||| |||||| ||||||||||| |||||  || || |||| ||||||||||      ||||||||||| | || ||||||| ||||||||     
T  17327590 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcagacacgtgtcgtgtccgacacgacactgacacatatagttacactaaattatgtg 17327689  T
Q  218 attttctcaaa 228  Q
    |||||||||||    
T  17327690 attttctcaaa 17327700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 198 - 260
Target Start/End: Complemental strand, 26562733 - 26562671
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||||||||||||||||| ||||||||||||| |||||  ||||| |||||  |||||||||    
T  26562733 taattacactgaattatgtgattttctcaaatttttagcagtgtcggcgtgtccgtgttcgtg 26562671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 260
Target Start/End: Complemental strand, 3398733 - 3398601
Alignment:
Q  132 acgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtct-----gacactgacacttgtaattacactgaattatgtaattttctca 226  Q
    |||||||||| || |||||| | ||| | ||| ||||||||||||||||||      ||||| || |||| ||||||||||||||||| | ||||| |||    
T  3398733 acgaacactcctctgattagacgtgttccggtgtcggacatgtgtcgtgtccaacacgacaccgatacttataattacactgaattatatgatttt-tca 3398635  T
Q  227 aattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||||||||  ||||| ||||| ||||| ||||    
T  3398634 aattattagctgtgtcggcgtgtcagtgtccgtg 3398601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 255
Target Start/End: Complemental strand, 7938180 - 7938103
Alignment:
Q  178 gtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    ||||| ||||| ||||||| |||||||||| |||||| | ||||| |||||||||||||  ||||| ||||| |||||    
T  7938180 gtgtcggacaccgacacttataattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgt 7938103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 9629441 - 9629376
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    ||||| ||||| | |||||||| |||||||||| |||||||||||||||| ||| ||||| |||||    
T  9629441 gacaccgacacatataattacattgaattatgtgattttctcaaattattggcggtgtcggcgtgt 9629376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 236
Target Start/End: Original strand, 20576641 - 20576686
Alignment:
Q  191 acacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    |||||| |||||||||||||||||| ||||||||| ||||||||||    
T  20576641 acacttataattacactgaattatgcaattttctcgaattattagc 20576686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 259
Target Start/End: Complemental strand, 25207808 - 25207747
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgt 259  Q
    |||||| ||||||||| |||| |||||||||||||||||| ||||| ||| || ||||||||    
T  25207808 taattatactgaattacgtaactttctcaaattattagcggtgtcggcgtattggtgttcgt 25207747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 222
Target Start/End: Original strand, 26402666 - 26402719
Alignment:
Q  169 acatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||| ||||||| ||||| ||||||||| ||||||||||||||||| |||||    
T  26402666 acatgtatcgtgtccgacaccgacacttgtgattacactgaattatgtcatttt 26402719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 243
Target Start/End: Complemental strand, 29220296 - 29220247
Alignment:
Q  194 cttgtaattacactgaattatgtaattttctcaaattattagcgatgtcg 243  Q
    ||||||||||||||| ||||  |||||||||||||||||||||| |||||    
T  29220296 cttgtaattacactgtattacataattttctcaaattattagcgttgtcg 29220247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 236
Target Start/End: Original strand, 1191677 - 1191753
Alignment:
Q  160 tggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    |||| ||||||| | ||||||||  |||  ||||||||||||||||||||||| ||| | ||| |||||||||||||    
T  1191677 tggtgtcggacacgcgtcgtgtccaacatcgacacttgtaattacactgaattttgtgaatttttcaaattattagc 1191753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 243
Target Start/End: Complemental strand, 1316031 - 1315936
Alignment:
Q  143 tcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtc 242  Q
    |||| |||||| ||| ||||| |||||||  || |||| | ||||| ||||||||||||||||     |||||||||||||||||| |||||||| ||||    
T  1316031 tcgggttaggcgtgttctggtgtcggacacatgacgtgcccgacaccgacacttgtaattaca-----ttatgtaattttctcaaactattagcggtgtc 1315937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 6327525 - 6327569
Alignment:
Q  190 gacacttgtaattacactgaattatgtaattttctcaaattatta 234  Q
    |||||||||||||||||| |||||| ||||||| |||||||||||    
T  6327525 gacacttgtaattacacttaattatataattttttcaaattatta 6327569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 249
Target Start/End: Complemental strand, 7086852 - 7086788
Alignment:
Q  185 acactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    |||| ||||| | |||||||||| |||||||| |||||||||||||||||||  || ||||||||    
T  7086852 acaccgacacatataattacactaaattatgtgattttctcaaattattagcagtgccgacgtgt 7086788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 260
Target Start/End: Original strand, 8365520 - 8365596
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||| ||||||||||||||||| ||||||||| || || ||||||||||||   ||||| ||||| ||||| ||||    
T  8365520 gacaccgacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtccgtg 8365596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 11800939 - 11800896
Alignment:
Q  190 gacacttgtaattacactgaattatgtaattttctcaaattatta 234  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||    
T  11800939 gacactggtaattacact-aattatgtaattttctcaaattatta 11800896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 12627537 - 12627629
Alignment:
Q  143 tcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    ||||||||||  ||||  ||| |||||||||||| ||||| ||||  ||||| | | ||||||||||||||||| ||||| ||| ||||||||    
T  12627537 tcggattaggagtgtctcggtgtcggacatgtgtggtgtccgacatcgacacatattattacactgaattatgtgattttttcacattattag 12627629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 27904029 - 27904104
Alignment:
Q  176 tcgtgtctgacactgacacttgtaattacactgaattatgtaattttctc--aaattattagcgatgtcgacgtgt 249  Q
    ||||||||||||| |||| ||||||||||||||||||||||  |||| |   ||||||||||| |||||| |||||    
T  27904029 tcgtgtctgacaccgacatttgtaattacactgaattatgtgttttttttttaaattattagctatgtcggcgtgt 27904104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 255
Target Start/End: Complemental strand, 33419292 - 33419160
Alignment:
Q  124 tatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcg-tgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||||| || |||  | ||||||||||||||||||| | ||||| | || | ||||||||||  |||| | |||||||| |||||||| | | |||    
T  33419292 tatgaagcacaaatacttcttggattaggcatgtcctggtgttggacacgcgttggtgtctgacaccaacacatataattacattgaattatatcaattt 33419193  T
Q  223 ctcaaattattagcgatgtcgacgtgttagtgt 255  Q
     |||||||||||| | | ||||| |||||||||    
T  33419192 ttcaaattattagtggtttcgacatgttagtgt 33419160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 33817993 - 33817949
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtc 242  Q
    |||||||||||||||||| ||||||||| ||||||||||| ||||    
T  33817993 taattacactgaattatgaaattttctccaattattagcggtgtc 33817949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 234
Target Start/End: Original strand, 6349745 - 6349788
Alignment:
Q  191 acacttgtaattacactgaattatgtaattttctcaaattatta 234  Q
    |||| |||||||||| |||||||||||||||| |||||||||||    
T  6349745 acacatgtaattacaatgaattatgtaattttttcaaattatta 6349788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 249
Target Start/End: Original strand, 8805587 - 8805638
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    |||||||||| |||||||| |||||||||||||||||||  || ||||||||    
T  8805587 taattacactaaattatgtgattttctcaaattattagcagtgccgacgtgt 8805638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 9195755 - 9195806
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    ||||| ||||| | |||||||||| |||||||| ||||||||||||||||||    
T  9195755 gacaccgacacatataattacactaaattatgtcattttctcaaattattag 9195806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 194
Target Start/End: Complemental strand, 18367966 - 18367895
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacac 194  Q
    |||||||||||| |||||| | |||| |||| |||||  || || ||||||||||||||||||||| |||||    
T  18367966 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacatgtgtcgtgtctgacaccgacac 18367895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 237
Target Start/End: Original strand, 30866159 - 30866198
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcg 237  Q
    |||||||| |||||||||| ||||||||||||||||||||    
T  30866159 taattacattgaattatgtgattttctcaaattattagcg 30866198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 34895034 - 34895085
Alignment:
Q  183 tgacactgacacttgtaattacactgaattatgtaattttctcaaattatta 234  Q
    |||||||||||| | | ||||||||||||| | |||||||||||||||||||    
T  34895034 tgacactgacacctatgattacactgaattgtataattttctcaaattatta 34895085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 249
Target Start/End: Original strand, 5000642 - 5000692
Alignment:
Q  199 aattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    ||||| ||||||| |||| |||||||| ||||||||||| |||||||||||    
T  5000642 aattatactgaatcatgtgattttctcgaattattagcggtgtcgacgtgt 5000692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 236
Target Start/End: Original strand, 7996393 - 7996431
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagc 236  Q
    ||||||||||||||||| | |||||||||||||||||||    
T  7996393 taattacactgaattatatgattttctcaaattattagc 7996431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 236
Target Start/End: Complemental strand, 8022408 - 8022370
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagc 236  Q
    ||||||||||||||||| | |||||||||||||||||||    
T  8022408 taattacactgaattatatgattttctcaaattattagc 8022370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 9617492 - 9617442
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattatta 234  Q
    ||||| ||||| | |||||||| |||||||||| |||||||||||||||||    
T  9617492 gacaccgacacatataattacattgaattatgtgattttctcaaattatta 9617442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 255
Target Start/End: Complemental strand, 17168935 - 17168881
Alignment:
Q  201 ttacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    ||||| |||||||||| ||||| ||||||||||| | ||||||||||||| ||||    
T  17168935 ttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgtttgtgt 17168881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #84
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 255
Target Start/End: Original strand, 17422281 - 17422327
Alignment:
Q  209 aattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    |||||| | ||||||||||||||||| || |||||||||||||||||    
T  17422281 aattatatcattttctcaaattattatcggtgtcgacgtgttagtgt 17422327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #85
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 236
Target Start/End: Original strand, 21924930 - 21924988
Alignment:
Q  178 gtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    ||||| ||||| ||||| | ||||||||||||||||| | || ||||||||||||||||    
T  21924930 gtgtccgacaccgacacatataattacactgaattatttgatattctcaaattattagc 21924988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #86
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 234
Target Start/End: Complemental strand, 29049927 - 29049893
Alignment:
Q  200 attacactgaattatgtaattttctcaaattatta 234  Q
    |||||| ||||||||||||||||||||||||||||    
T  29049927 attacattgaattatgtaattttctcaaattatta 29049893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #87
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 234
Target Start/End: Complemental strand, 34446607 - 34446573
Alignment:
Q  200 attacactgaattatgtaattttctcaaattatta 234  Q
    ||||||||||||||||| |||||||||||||||||    
T  34446607 attacactgaattatgtcattttctcaaattatta 34446573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #88
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 6751878 - 6751927
Alignment:
Q  179 tgtctgacactgacacttgtaattacactgaattatgtaattttctcaaa 228  Q
    |||| ||||| ||||||||| |||||| |||||||||| |||||||||||    
T  6751878 tgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 6751927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #89
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 221
Target Start/End: Original strand, 9911529 - 9911566
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattt 221  Q
    ||||| ||||||||||||||||||||||||||| ||||    
T  9911529 gacaccgacacttgtaattacactgaattatgtgattt 9911566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #90
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 249
Target Start/End: Complemental strand, 10842574 - 10842525
Alignment:
Q  200 attacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    |||||||| |||||||| ||||| |||||||||||||| ||||| |||||    
T  10842574 attacactaaattatgtgattttttcaaattattagcggtgtcggcgtgt 10842525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #91
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 16388211 - 16388248
Alignment:
Q  177 cgtgtctgacactgacacttgtaattacactgaattat 214  Q
    |||||| ||||| |||||||||||||||||||||||||    
T  16388211 cgtgtccgacaccgacacttgtaattacactgaattat 16388248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #92
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 17302615 - 17302538
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgt-aattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    |||| ||||||||||||||||| |||||||||| | |||| ||||||||||||   ||||  ||||| ||||||||||    
T  17302615 gacaatgacacttgtaattacattgaattatgtgatttttttcaaattattagttgtgtcagcgtgtcagtgttcgtg 17302538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #93
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 165
Target Start/End: Original strand, 17341622 - 17341663
Alignment:
Q  124 tatgaagcacgaacactcatcggattaggcatgtcctggtat 165  Q
    |||||||||| ||||||| ||||||||||| |||||||||||    
T  17341622 tatgaagcacaaacactcctcggattaggcgtgtcctggtat 17341663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #94
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 20371111 - 20371176
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    ||||| ||||| | |||| ||| ||| |||||| |||||||||||||||||||| ||||| |||||    
T  20371111 gacaccgacacatataatcacattgagttatgtgattttctcaaattattagcggtgtcggcgtgt 20371176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #95
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 188
Target Start/End: Original strand, 23130405 - 23130466
Alignment:
Q  127 gaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacac 188  Q
    |||||||  |||||| || |||||||||||||| | |||| |||| ||||||||||||||||    
T  23130405 gaagcacatacactcctcagattaggcatgtcccgatatcagacacgtgtcgtgtctgacac 23130466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #96
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 222
Target Start/End: Complemental strand, 23771655 - 23771598
Alignment:
Q  165 tcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||  ||||||||| ||||| |||| |||||||||||||||| ||| |||||||    
T  23771655 tcggacacatgtcgtgtccgacaccgacatttgtaattacactgaagtatataatttt 23771598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #97
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 25096469 - 25096416
Alignment:
Q  196 tgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    ||||||||||||  ||||||| |||||||||||||||||| | ||||| |||||    
T  25096469 tgtaattacactagattatgtgattttctcaaattattagtggtgtcgtcgtgt 25096416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #98
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 4118341 - 4118401
Alignment:
Q  191 acacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgtta 251  Q
    ||||||||||||||| | |||||||| ||||| ||||||||||| | || ||| |||||||    
T  4118341 acacttgtaattacatttaattatgtgattttttcaaattattaactatatcgtcgtgtta 4118401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #99
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 234
Target Start/End: Complemental strand, 5462730 - 5462694
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattatta 234  Q
    |||||||| |||||||||| |||||||||||||||||    
T  5462730 taattacaatgaattatgtgattttctcaaattatta 5462694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #100
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 6214618 - 6214542
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||| ||||| | |||||||||| ||||||||  |||| | |||||| ||||| | ||| ||||||||||||||||    
T  6214618 gacaccgacacatctaattacacttaattatgtgtttttttaaaattactagcggtatcggcgtgttagtgttcgtg 6214542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #101
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 159
Target Start/End: Original strand, 8805524 - 8805560
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcc 159  Q
    |||||||||||| |||||| |||||||||||||||||    
T  8805524 ctatgaagcacggacactcctcggattaggcatgtcc 8805560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #102
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 250
Target Start/End: Original strand, 8931617 - 8931669
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgtt 250  Q
    |||||| |||||||||||| ||||||||||||| |||||  ||||| ||||||    
T  8931617 taattatactgaattatgttattttctcaaatttttagctgtgtcggcgtgtt 8931669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #103
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 232
Target Start/End: Original strand, 9024177 - 9024225
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattat 232  Q
    ||||||||||| | | |||||| |||||||||| |||||||||||||||    
T  9024177 gacactgacacatatgattacattgaattatgtcattttctcaaattat 9024225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #104
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 9911482 - 9911522
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggt 163  Q
    |||||||||| |||||||| ||||||||||| |||||||||    
T  9911482 ctatgaagcatgaacactcctcggattaggcgtgtcctggt 9911522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #105
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 10031621 - 10031557
Alignment:
Q  191 acacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    |||||||| |||||| |||||||||| ||||||||||| | ||| || |||| ||||||| ||||    
T  10031621 acacttgtgattacattgaattatgtcattttctcaaaattttatcggtgtcaacgtgtttgtgt 10031557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #106
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 230
Target Start/End: Original strand, 11591885 - 11591917
Alignment:
Q  198 taattacactgaattatgtaattttctcaaatt 230  Q
    ||||||||||||||||||| |||||||||||||    
T  11591885 taattacactgaattatgtgattttctcaaatt 11591917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #107
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 13211307 - 13211347
Alignment:
Q  209 aattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    |||||||| ||||||||||||||||| | ||||||||||||    
T  13211307 aattatgtcattttctcaaattattatcaatgtcgacgtgt 13211347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #108
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 19044523 - 19044471
Alignment:
Q  183 tgacactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    |||||| ||||| | |||| |||||||||||||| || |||||||||||||||    
T  19044523 tgacaccgacacatataataacactgaattatgtgatattctcaaattattag 19044471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #109
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 19369875 - 19369831
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaa 228  Q
    ||||| ||||||||| |||||| |||||||||| |||||||||||    
T  19369875 gacaccgacacttgtgattacattgaattatgtcattttctcaaa 19369831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 2e-36; HSPs: 82)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 18840952 - 18841065
Alignment:
Q  122 actatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattt 221  Q
    ||||||||||||| |||||| ||||||||||  ||||| ||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  18840952 actatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacacttgtaattacacttaattatgtaattt 18841051  T
Q  222 tctcaaattattag 235  Q
    | ||||||||||||    
T  18841052 tttcaaattattag 18841065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 125 - 236
Target Start/End: Original strand, 2438661 - 2438772
Alignment:
Q  125 atgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttct 224  Q
    |||||||||| |||||| ||||||||||| ||||| ||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||| |    
T  2438661 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttttt 2438760  T
Q  225 caaattattagc 236  Q
     |||||||||||    
T  2438761 gaaattattagc 2438772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 123 - 260
Target Start/End: Original strand, 30404790 - 30404927
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    ||||||||||| ||| ||  || |||||||||||||||||| |||||||||||||||||| ||| | ||||||||||||||||||||||||||| |||||    
T  30404790 ctatgaagcacaaacgcttctcagattaggcatgtcctggtgtcggacatgtgtcgtgtccgacgccgacacttgtaattacactgaattatgtgatttt 30404889  T
Q  223 ctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
     ||||||||||| |  ||||| ||||| ||||| ||||    
T  30404890 ttcaaattattaaccgtgtcggcgtgtcagtgtccgtg 30404927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 123 - 234
Target Start/End: Complemental strand, 15972992 - 15972881
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||||||| ||| || ||||||||||  ||||| ||  ||||||| |||||||||| ||||| ||||||||||||||||||||||| |||||||||    
T  15972992 ctatgaagcacggacattcttcggattaggtgtgtcccggcgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattgtgtaatttt 15972893  T
Q  223 ctcaaattatta 234  Q
     |||||||||||    
T  15972892 ttcaaattatta 15972881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 126 - 243
Target Start/End: Complemental strand, 21091839 - 21091722
Alignment:
Q  126 tgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctc 225  Q
    ||||||||| |||||| ||||| ||||  ||||| ||| || |||| ||| | |||||||||||||||||||||||||||||||| ||||| |||||||     
T  21091839 tgaagcacggacactcttcggaataggtgtgtcccggtgtccgacaggtggcttgtctgacactgacacttgtaattacactgaagtatgttattttctt 21091740  T
Q  226 aaattattagcgatgtcg 243  Q
    |||||||||||| |||||    
T  21091739 aaattattagcggtgtcg 21091722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 255
Target Start/End: Original strand, 38117098 - 38117231
Alignment:
Q  122 actatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattt 221  Q
    ||||||||||||| |||| | ||||||||||| ||||| ||| ||||||| |||| ||||| |||||  |||||||||||||||| ||| ||||| ||||    
T  38117098 actatgaagcacggacacccctcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccaacacttgtaattacaccgaagtatgtgattt 38117197  T
Q  222 tctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    | |||||||||||||  ||||| ||||| |||||    
T  38117198 tttcaaattattagctgtgtcggcgtgtcagtgt 38117231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 123 - 260
Target Start/End: Complemental strand, 37559096 - 37558959
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||||||| |||||| |||||||| || ||| | ||| ||||||| |||||  ||| ||||| |||||||||||||||| |||||||||| |||||    
T  37559096 ctatgaagcacggacactcctcggattaagcgtgtaccggtgtcggacacgtgtcaagtccgacaccgacacttgtaattacattgaattatgtgatttt 37558997  T
Q  223 ctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
      ||||||||||||  ||||| ||||| ||||| ||||    
T  37558996 tacaaattattagctgtgtcggcgtgtcagtgtccgtg 37558959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 189 - 260
Target Start/End: Original strand, 21374705 - 21374776
Alignment:
Q  189 tgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||  ||||| ||||||||||| ||||    
T  21374705 tgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgttagtgtccgtg 21374776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 189 - 260
Target Start/End: Complemental strand, 39323317 - 39323246
Alignment:
Q  189 tgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| | ||||| ||||    
T  39323317 tgacacttgtaattacactgaattatgtaattttgtcaaattattagcggtgtcgacgtttcagtgtccgtg 39323246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 260
Target Start/End: Complemental strand, 6940377 - 6940237
Alignment:
Q  120 tgactatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaat 219  Q
    |||||| |||||||| ||| ||||  |||||||  |||| |||| | ||||| |||||||||| || || |||||||||||||||||| ||||||||||     
T  6940377 tgactacgaagcacggacaatcatttgattaggtgtgtcttggtgttggacacgtgtcgtgtcggataccgacacttgtaattacacttaattatgtaac 6940278  T
Q  220 tttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||| | |||||||||||  ||||| ||||| ||||| ||||    
T  6940277 tttttaaaattattagctgtgtcggcgtgtcagtgtccgtg 6940237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 145 - 235
Target Start/End: Complemental strand, 5367289 - 5367199
Alignment:
Q  145 ggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    ||||||||| ||||| ||  ||||| |||||||||||| ||||| ||||| | ||||||||||||||||||| |||| |||||||||||||    
T  5367289 ggattaggcgtgtcccggagtcggatatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgatttcctcaaattattag 5367199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 234
Target Start/End: Complemental strand, 18571068 - 18570980
Alignment:
Q  146 gattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattatta 234  Q
    |||||||| ||||||||| ||||| |||| ||||||  ||||||||||| | | |||||| |||||||||| |||||||||||||||||    
T  18571068 gattaggcgtgtcctggtgtcggatatgtatcgtgttcgacactgacacatatgattacattgaattatgtcattttctcaaattatta 18570980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 124 - 216
Target Start/End: Complemental strand, 28596587 - 28596495
Alignment:
Q  124 tatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgt 216  Q
    ||||||||||| |||||| ||||||||||  |||||  || ||||||| |||||||||| ||||| ||||||| |||||||||||| ||||||    
T  28596587 tatgaagcacggacactcctcggattaggagtgtccgagtgtcggacacgtgtcgtgtccgacaccgacacttataattacactgacttatgt 28596495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 243
Target Start/End: Original strand, 42832277 - 42832336
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcg 243  Q
    ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||| |||||    
T  42832277 gacaccgacacttataattacactgaaatatgtaattttctcaaattattagcggtgtcg 42832336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 243
Target Start/End: Complemental strand, 31808174 - 31808076
Alignment:
Q  145 ggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcg 243  Q
    ||||||||  ||||| ||| ||| |||||||||||||   |||||||||| | ||||||||||||||||||| ||||| | |||||||||||| |||||    
T  31808174 ggattaggtgtgtccaggtgtcgaacatgtgtcgtgttcaacactgacacatataattacactgaattatgtgattttgttaaattattagcggtgtcg 31808076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 123 - 224
Target Start/End: Original strand, 20242667 - 20242768
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||||||  |||||| |||||| |||| |||||| || || |||| |||| ||||| ||||| ||||| | ||||||||||||||||||| |||||    
T  20242667 ctatgaagcacagacactcttcggataaggcgtgtcctcgtgtcagacacgtgttgtgtccgacaccgacacatataattacactgaattatgtgatttt 20242766  T
Q  223 ct 224  Q
    ||    
T  20242767 ct 20242768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 260
Target Start/End: Original strand, 20539675 - 20539751
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||| |||||||||||||||||| |||||| | ||||| |||||||||||||  ||||||||||| ||||| ||||    
T  20539675 gacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcgacgtgtcagtgtccgtg 20539751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 249
Target Start/End: Complemental strand, 21616806 - 21616755
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||| |||||    
T  21616806 taattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgt 21616755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 256
Target Start/End: Original strand, 21782833 - 21782891
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgtt 256  Q
    ||||||||||||||||||| |||||||||||||||||||  ||||| ||||| ||||||    
T  21782833 taattacactgaattatgtgattttctcaaattattagcagtgtcggcgtgtcagtgtt 21782891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 260
Target Start/End: Complemental strand, 28412394 - 28412332
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||||||||||||||||| ||||| ||||||||||| || ||| ||||||||||||| ||||    
T  28412394 taattacactgaattatgtgattttatcaaattattaacggtgttgacgtgttagtgtccgtg 28412332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 30717537 - 30717583
Alignment:
Q  190 gacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||    
T  30717537 gacacttgtaattacactgaattatgtgattttttcaaattattagc 30717583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 243
Target Start/End: Original strand, 37411198 - 37411304
Alignment:
Q  137 cactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    ||||| ||||| ||||| |||||  || ||||||| | |||||||  ||||  ||||| | |||| |||||||||||||| |||||||||||||||||||    
T  37411198 cactcctcggactaggcgtgtcccagtgtcggacacgcgtcgtgttcgacatcgacacatataatcacactgaattatgtgattttctcaaattattagc 37411297  T
Q  237 gatgtcg 243  Q
    | |||||    
T  37411298 ggtgtcg 37411304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 11223863 - 11223916
Alignment:
Q  183 tgacactgacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    |||||| ||||||||||||||||||||||||||| ||||| ||||| |||||||    
T  11223863 tgacaccgacacttgtaattacactgaattatgttattttttcaaaatattagc 11223916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 12668424 - 12668489
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    ||||| ||||||| ||||||||||||||||||| ||||| ||||||||||||  |||||| |||||    
T  12668424 gacaccgacacttataattacactgaattatgtcattttttcaaattattagttatgtcggcgtgt 12668489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 216
Target Start/End: Original strand, 34993922 - 34994015
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgt 216  Q
    ||||||||||||||||||| | | ||||||| |||||  || |||||||  ||||||||  ||||||||||| | |||||||| ||||||||||    
T  34993922 ctatgaagcacgaacactccttgaattaggcgtgtcccagtgtcggacacatgtcgtgttcgacactgacacatataattacattgaattatgt 34994015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 255
Target Start/End: Complemental strand, 37419873 - 37419730
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacac-----------ttgtaattacactgaat 211  Q
    |||||||||||| |||||| ||||||||||| ||||| ||| ||||||| |  ||||||| ||||| |||||           |||||||||||||||||    
T  37419873 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgcatcgtgtccgacaccgacacgacaccggcacttgtaattacactgaat 37419774  T
Q  212 tatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    | ||| ||||| |||||||||| || |||||| ||||| |||||    
T  37419773 tttgtgattttttcaaattatttgccatgtcggcgtgtcagtgt 37419730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 5040845 - 5040738
Alignment:
Q  131 cacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaa--ttttctcaaa 228  Q
    |||| |||||| | ||| ||||| ||||| ||  |||||||  ||||||||| ||||| |||||||||||||||| |||||||||| |  |||| |||||    
T  5040845 cacggacactccttggactaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacacttgtaattacattgaattatgtgattttttttcaaa 5040746  T
Q  229 ttattagc 236  Q
    ||||||||    
T  5040745 ttattagc 5040738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 241
Target Start/End: Complemental strand, 12224337 - 12224222
Alignment:
Q  128 aagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaa--ttttctc 225  Q
    |||||| ||||||| | ||||||||| |||||  || ||||||| || ||||||| ||||| |||||||||||||||| || ||||||  |  |||| ||    
T  12224337 aagcacaaacactccttggattaggcgtgtcccagtgtcggacacgtatcgtgtccgacaccgacacttgtaattacattggattatgggattttttttc 12224238  T
Q  226 aaattattagcgatgt 241  Q
    ||||||||||| ||||    
T  12224237 aaattattagctatgt 12224222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 198 - 234
Target Start/End: Complemental strand, 23921297 - 23921261
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattatta 234  Q
    |||||||||||||||||||||||||||||||||||||    
T  23921297 taattacactgaattatgtaattttctcaaattatta 23921261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 4882703 - 4882762
Alignment:
Q  190 gacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    ||||||||||||||||||||||||| | ||||| |||||| ||||||| | |||||||||    
T  4882703 gacacttgtaattacactgaattatatcattttttcaaataattagcggtatcgacgtgt 4882762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 10535766 - 10535829
Alignment:
Q  190 gacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagt 253  Q
    ||||||| | ||||||||||||||||| ||||||||||||||||| || ||||| ||| |||||    
T  10535766 gacacttatgattacactgaattatgtcattttctcaaattattatcggtgtcggcgtattagt 10535829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 235
Target Start/End: Original strand, 19536391 - 19536450
Alignment:
Q  177 cgtgtctgacactgacacttgtaattacactgaattatgt-aattttctcaaattattag 235  Q
    |||||| ||||| ||||||||||||||||||||||||||| | |||| ||||||||||||    
T  19536391 cgtgtccgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattag 19536450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 255
Target Start/End: Complemental strand, 21624332 - 21624253
Alignment:
Q  177 cgtgtctgacactgacacttgtaattacactgaattatg-taattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    |||||| ||||| |||||||||||||||||||||||||| || |||| | |||||||||||  ||||| ||||| |||||    
T  21624332 cgtgtccgacaccgacacttgtaattacactgaattatgctatttttttaaaattattagctgtgtcggcgtgtcagtgt 21624253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 36756345 - 36756416
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    ||||| ||||||| ||||||||||||||||||| ||||  ||||||||||||   ||||||||||| |||||    
T  36756345 gacaccgacacttataattacactgaattatgttatttcttcaaattattagttgtgtcgacgtgtcagtgt 36756416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 15907850 - 15907912
Alignment:
Q  122 actatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctg 184  Q
    ||||||||||||| ||||||||| |||| ||| ||||| ||| ||||| ||||||||||||||    
T  15907850 actatgaagcacggacactcatcagattgggcgtgtcccggtgtcggatatgtgtcgtgtctg 15907912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 243
Target Start/End: Complemental strand, 18276582 - 18276520
Alignment:
Q  181 tctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcg 243  Q
    |||||||| |||||   |||||||||||||||| || |||||||||||||||||||| |||||    
T  18276582 tctgacaccgacacacataattacactgaattaagtgattttctcaaattattagcggtgtcg 18276520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 198 - 260
Target Start/End: Complemental strand, 23718070 - 23718008
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||||||||||||||||| | |||||||||||||||||| |||||  |||| ||||| ||||    
T  23718070 taattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtg 23718008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 198 - 260
Target Start/End: Complemental strand, 24105742 - 24105680
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||||||||||||||||| | |||||||||||||||||| |||||  |||| ||||| ||||    
T  24105742 taattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtg 24105680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 260
Target Start/End: Complemental strand, 30335512 - 30335399
Alignment:
Q  146 gattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgac 245  Q
    |||||||||| |||  || ||| ||||||||  |||| ||||| |||| ||||||||||||| |||||||| ||||| ||||||||||||   ||||| |    
T  30335512 gattaggcatatcccagtgtcgaacatgtgttatgtc-gacaccgacatttgtaattacactaaattatgtcattttttcaaattattagttgtgtcggc 30335414  T
Q  246 gtgttagtgttcgtg 260  Q
    ||| |||||| ||||    
T  30335413 gtgctagtgtccgtg 30335399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 234
Target Start/End: Complemental strand, 35449627 - 35449521
Alignment:
Q  124 tatgaagcacgaacactcatcggattaggca--tgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattt 221  Q
    ||||||||||  |||||| |||||||||  |  ||| ||||| ||||||||||||||||||||||||  |      ||||||||||||||| ||| ||||    
T  35449627 tatgaagcacagacactcctcggattagagacgtgttctggtgtcggacatgtgtcgtgtctgacacata------taattacactgaattctgtgattt 35449534  T
Q  222 tctcaaattatta 234  Q
    |||||||||||||    
T  35449533 tctcaaattatta 35449521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 123 - 256
Target Start/End: Complemental strand, 37497240 - 37497106
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcg-tgtctgacactgacacttgtaattacactgaattatgtaattt 221  Q
    |||||||||||| |||||  | ||||||| ||||||| |||  || |||||||||| |||||||||| ||||  | | |||||| |||||| ||  ||||    
T  37497240 ctatgaagcacggacacttctgggattagccatgtcccggtgccgaacatgtgtcggtgtctgacaccgacagatattattacattgaattgtggcattt 37497141  T
Q  222 tctcaaattattagcgatgtcgacgtgttagtgtt 256  Q
    ||||||||||||| |  |||||| |||| ||||||    
T  37497140 tctcaaattattatcagtgtcgatgtgtcagtgtt 37497106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 234
Target Start/End: Original strand, 40361739 - 40361805
Alignment:
Q  168 gacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattatta 234  Q
    |||| ||||||||||||||||  |||  | |||||||||| |||||||||||||| |||||||||||    
T  40361739 gacacgtgtcgtgtctgacaccaacagatataattacactaaattatgtaattttttcaaattatta 40361805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 44605136 - 44605190
Alignment:
Q  180 gtctgacactgacacttgtaattacactgaattatgtaattttctcaaattatta 234  Q
    |||| |||| ||||| |||||||||| |||||||||| |||||||||||||||||    
T  44605136 gtctaacaccgacacatgtaattacattgaattatgttattttctcaaattatta 44605190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 242
Target Start/End: Complemental strand, 44860378 - 44860320
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtc 242  Q
    ||||| ||||| | ||||||||||||||||||  |||||||||||||||||||| ||||    
T  44860378 gacaccgacacatataattacactgaattatgcgattttctcaaattattagcggtgtc 44860320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 234
Target Start/End: Complemental strand, 2415394 - 2415325
Alignment:
Q  165 tcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattatta 234  Q
    ||||||||| ||||||||| ||||  |||| | || ||||||| |||||| |||||||||||||||||||    
T  2415394 tcggacatgagtcgtgtctcacaccaacacatatagttacacttaattatataattttctcaaattatta 2415325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 28677953 - 28677908
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcg 243  Q
    ||||||||||||||||||| ||||| |||||||||||||| |||||    
T  28677953 taattacactgaattatgtgattttttcaaattattagcggtgtcg 28677908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 256
Target Start/End: Original strand, 35447895 - 35447960
Alignment:
Q  191 acacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgtt 256  Q
    |||||| || ||| ||||||||||||||||||||  ||||||||||||||||  ||||| ||||||    
T  35447895 acacttatagttatactgaattatgtaattttctttaattattagcgatgtcagcgtgtaagtgtt 35447960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 10535685 - 10535725
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggt 163  Q
    ||||||||||||||||||| ||||||||||| |||||||||    
T  10535685 ctatgaagcacgaacactcctcggattaggcgtgtcctggt 10535725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 15657922 - 15657846
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||| |||| |||||||||||||||||||||| |||||  |||||||||||    |||| ||||||||||| ||||    
T  15657922 gacaccgacatttgtaattacactgaattatgtgatttttacaaattattagttgagtcggcgtgttagtgtccgtg 15657846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 228
Target Start/End: Original strand, 15909633 - 15909677
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaa 228  Q
    ||||||| ||| | |||||||||||||||||||||||||||||||    
T  15909633 gacactgtcacatataattacactgaattatgtaattttctcaaa 15909677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 253
Target Start/End: Complemental strand, 18589309 - 18589187
Alignment:
Q  127 gaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctca 226  Q
    |||||||| ||| |||||||||||||||||| | |||  | || |  | ||||||| ||||||||||| | || ||| |||||||| |||||||||||      
T  18589309 gaagcacggacattcatcggattaggcatgtaccggt--cagatacatctcgtgtccgacactgacacatatagttagactgaattgtgtaattttct-- 18589214  T
Q  227 aattattagcgatgtcgacgtgttagt 253  Q
    ||||||||||  ||||| |||||||||    
T  18589213 aattattagcagtgtcggcgtgttagt 18589187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 237
Target Start/End: Original strand, 34691799 - 34691859
Alignment:
Q  177 cgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcg 237  Q
    |||||| ||||| ||||| | ||||||||||||||||| | ||||| ||||||||||||||    
T  34691799 cgtgtccgacaccgacacatataattacactgaattatatgattttatcaaattattagcg 34691859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 237
Target Start/End: Original strand, 34714211 - 34714271
Alignment:
Q  177 cgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcg 237  Q
    |||||| ||||| ||||| | ||||||||||||||||| | ||||| ||||||||||||||    
T  34714211 cgtgtccgacaccgacacatataattacactgaattatatgattttatcaaattattagcg 34714271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 43585998 - 43586050
Alignment:
Q  176 tcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaa 228  Q
    ||||||| ||||| ||||||||| |||||| |||||||||| |||||||||||    
T  43585998 tcgtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 43586050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 974805 - 974754
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    ||||| |||||||||||||||||||||| |||| || || ||||||||||||    
T  974805 gacaccgacacttgtaattacactgaataatgtgatcttttcaaattattag 974754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 228
Target Start/End: Original strand, 14450797 - 14450840
Alignment:
Q  185 acactgacacttgtaattacactgaattatgtaattttctcaaa 228  Q
    |||||||||||||| |||||| |||||||||| |||||||||||    
T  14450797 acactgacacttgtgattacattgaattatgtgattttctcaaa 14450840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 236
Target Start/End: Original strand, 18420436 - 18420487
Alignment:
Q  185 acactgacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    |||| ||||||| ||||| || |||||||||| |||||||||||||||||||    
T  18420436 acaccgacacttataattgcattgaattatgtgattttctcaaattattagc 18420487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 249
Target Start/End: Complemental strand, 19574022 - 19573971
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    ||||||||||||||||||| ||||||| ||||||||| || ||||| |||||    
T  19574022 taattacactgaattatgttattttcttaaattattatcggtgtcggcgtgt 19573971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 182
Target Start/End: Complemental strand, 26769641 - 26769582
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtc 182  Q
    |||||||||||| |||||| ||||||||||| |||||  || ||||||| ||||||||||    
T  26769641 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtc 26769582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 242
Target Start/End: Original strand, 31456645 - 31456700
Alignment:
Q  187 actgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtc 242  Q
    ||||| |||| ||||||||||||||||  ||||||||| |||||||||||| ||||    
T  31456645 actgatacttataattacactgaattacataattttcttaaattattagcggtgtc 31456700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 32749826 - 32749869
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaa 227  Q
    ||||||||||||| | ||||||||||||||||| ||||||||||    
T  32749826 gacactgacacttattattacactgaattatgtgattttctcaa 32749869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 33153482 - 33153431
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    ||||| ||||||||||||||||||||||||||| ||||| | |||| |||||    
T  33153482 gacacggacacttgtaattacactgaattatgtgatttttttaaatcattag 33153431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 260
Target Start/End: Original strand, 12940942 - 12941012
Alignment:
Q  190 gacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    |||| |||||||||||||||||||| | ||||| ||||||||||||   |||| |||||| ||||| ||||    
T  12940942 gacatttgtaattacactgaattatatgattttttcaaattattagttgtgtcaacgtgtcagtgtccgtg 12941012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 18422021 - 18421971
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattatta 234  Q
    ||||| ||||||||||||||||||||||||||| || || | |||||||||    
T  18422021 gacaccgacacttgtaattacactgaattatgtgatatttttaaattatta 18421971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 255
Target Start/End: Complemental strand, 31018655 - 31018577
Alignment:
Q  177 cgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    |||||| ||||| ||||| | |||||||||| ||| |||| ||||||| |||||||||||| ||| | ||||| |||||    
T  31018655 cgtgtccgacaccgacacctataattacactaaatcatgtgattttctgaaattattagcggtgttggcgtgtcagtgt 31018577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 260
Target Start/End: Complemental strand, 31284092 - 31284030
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    |||||||| || ||||||| |||||||||||||||||||  ||||| ||||| ||||| ||||    
T  31284092 taattacaatggattatgtgattttctcaaattattagcagtgtcggcgtgtaagtgtacgtg 31284030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 226
Target Start/End: Complemental strand, 33884109 - 33884067
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctca 226  Q
    ||||| |||||||||||||||||||||| |||| |||||||||    
T  33884109 gacaccgacacttgtaattacactgaatcatgtcattttctca 33884067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 40682040 - 40681990
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattatta 234  Q
    |||| |||||| || ||||||| |||||||||| |||||||||||||||||    
T  40682040 gacattgacacgtgcaattacattgaattatgtcattttctcaaattatta 40681990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 13273019 - 13273084
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    |||||||||| || |||||| | |||||||| |||||||||||||| ||||  | |||||||||||    
T  13273019 gacactgacatttataattagattgaattatataattttctcaaatgattatgggtgtcgacgtgt 13273084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 237
Target Start/End: Original strand, 18889608 - 18889645
Alignment:
Q  200 attacactgaattatgtaattttctcaaattattagcg 237  Q
    ||||||||||||||||| |||||||||| |||||||||    
T  18889608 attacactgaattatgtgattttctcaatttattagcg 18889645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 260
Target Start/End: Complemental strand, 24894440 - 24894371
Alignment:
Q  191 acacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    |||||| ||||| ||||||||||||| ||||| | |||||||||||  ||||| ||||| ||||| ||||    
T  24894440 acacttttaattgcactgaattatgtgatttttttaaattattagctgtgtcggcgtgtcagtgtccgtg 24894371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 25080944 - 25080887
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    |||||||||||| |||||| || || |||||||||||||| || || |||||||||||    
T  25080944 taattacactgacttatgtgatcttatcaaattattagcggtgccggcgtgttagtgt 25080887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 235
Target Start/End: Complemental strand, 25846785 - 25846748
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattag 235  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  25846785 taattacactgaatcatgtgattttctcaaattattag 25846748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 234
Target Start/End: Original strand, 29176475 - 29176544
Alignment:
Q  165 tcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattatta 234  Q
    ||||||||||| ||||||  ||||  |||||| ||||||||||||||||||| |  || |||||||||||    
T  29176475 tcggacatgtgccgtgtccaacaccaacacttataattacactgaattatgtgaccttttcaaattatta 29176544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 249
Target Start/End: Original strand, 30298464 - 30298513
Alignment:
Q  200 attacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    ||||||||||||||||| ||||| | ||||||||| || |||||||||||    
T  30298464 attacactgaattatgtcattttattaaattattatcggtgtcgacgtgt 30298513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 2331834 - 2331802
Alignment:
Q  202 tacactgaattatgtaattttctcaaattatta 234  Q
    ||||||||||||||| |||||||||||||||||    
T  2331834 tacactgaattatgtgattttctcaaattatta 2331802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 194
Target Start/End: Original strand, 22084756 - 22084830
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcc---tggtatcggacatgtgtcgtgtctgacactgacac 194  Q
    |||||||||||  |||||||||||||||||| |||||   |||| || |||| |||| ||||| |||||||||||    
T  22084756 ctatgaagcacagacactcatcggattaggcgtgtcccggtggtgtcagacacgtgttgtgtccgacactgacac 22084830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 23406932 - 23406876
Alignment:
Q  178 gtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattatta 234  Q
    ||||| ||||||||||| | | ||||  ||||||||||||||||||| |||||||||    
T  23406932 gtgtccgacactgacacctatgattattctgaattatgtaattttcttaaattatta 23406876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 24067824 - 24067764
Alignment:
Q  168 gacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaa 228  Q
    |||| |||||||||||||||| ||||||||| ||| || | |||||||  |||||||||||    
T  24067824 gacacgtgtcgtgtctgacaccgacacttgtgatttcatttaattatgacattttctcaaa 24067764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 27286292 - 27286352
Alignment:
Q  183 tgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcg 243  Q
    ||||| |||||| | |||||||||| |||||||| || || |||||||||||||| |||||    
T  27286292 tgacattgacacctataattacacttaattatgtgatcttatcaaattattagcgttgtcg 27286352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 230
Target Start/End: Complemental strand, 41942149 - 41942117
Alignment:
Q  198 taattacactgaattatgtaattttctcaaatt 230  Q
    |||||| ||||||||||||||||||||||||||    
T  41942149 taattatactgaattatgtaattttctcaaatt 41942117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 191
Target Start/End: Original strand, 42511322 - 42511390
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactga 191  Q
    |||||||||||| |||||| ||||||||| | |||||  || ||||||| |||| ||||| ||||||||    
T  42511322 ctatgaagcacggacactcctcggattagccgtgtccctgtgtcggacacgtgttgtgtccgacactga 42511390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 8e-33; HSPs: 92)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 122 - 249
Target Start/End: Original strand, 23292925 - 23293052
Alignment:
Q  122 actatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattt 221  Q
    ||||||||||||| |||||| ||||||||||| ||||| ||| ||||||| |||||||||| ||||| |||||||||||||| |||||||||||| ||||    
T  23292925 actatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattatactgaattatgtgattt 23293024  T
Q  222 tctcaaattattagcgatgtcgacgtgt 249  Q
    | |||||||||||||  ||||| |||||    
T  23293025 tttcaaattattagctgtgtcggcgtgt 23293052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 122 - 242
Target Start/End: Original strand, 28964187 - 28964307
Alignment:
Q  122 actatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattt 221  Q
    ||||||||||| | |||||| ||||||||||| |||||  || ||||| |||||||||||| ||||| ||||||||||||||||||||||||||| ||||    
T  28964187 actatgaagcatggacactcctcggattaggcgtgtcccagtgtcggatatgtgtcgtgtccgacacagacacttgtaattacactgaattatgtgattt 28964286  T
Q  222 tctcaaattattagcgatgtc 242  Q
    | ||||||||||||| |||||    
T  28964287 tttcaaattattagctatgtc 28964307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 124 - 236
Target Start/End: Original strand, 3947702 - 3947819
Alignment:
Q  124 tatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtc-----tgacactgacacttgtaattacactgaattatgtaa 218  Q
    ||||||||||| |||||| ||||||||||  ||||||||| ||||||| ||||||||||      ||||||||||||||||||||||||||||||||  |    
T  3947702 tatgaagcacggacactcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgtccgacacgacactgacacttgtaattacactgaattatgcga 3947801  T
Q  219 ttttctcaaattattagc 236  Q
    |||| |||||||||||||    
T  3947802 ttttttcaaattattagc 3947819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 243
Target Start/End: Original strand, 8423657 - 8423778
Alignment:
Q  122 actatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattt 221  Q
    ||||||| ||||| |||||  || |||||||| ||||| ||| |||||||  ||||||||| ||||| |||| || ||||||||||||||||||| ||||    
T  8423657 actatgacgcacggacacttctccgattaggcgtgtcccggtgtcggacagctgtcgtgtccgacaccgacatttataattacactgaattatgtgattt 8423756  T
Q  222 tctcaaattattagcgatgtcg 243  Q
    |||||||||||||||| |||||    
T  8423757 tctcaaattattagcggtgtcg 8423778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 12797277 - 12797389
Alignment:
Q  122 actatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattt 221  Q
    |||| |||||||||||| || ||||||||| | ||||| ||| || ||||||| ||||||| ||||| ||||||||||||||||||||||||||| ||||    
T  12797277 actacgaagcacgaacattcctcggattagacttgtcccggtgtcagacatgtatcgtgtccgacaccgacacttgtaattacactgaattatgtgattt 12797376  T
Q  222 tctcaaattattag 235  Q
    | ||||||||||||    
T  12797377 t-tcaaattattag 12797389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 136 - 236
Target Start/End: Complemental strand, 21945609 - 21945509
Alignment:
Q  136 acactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    |||||| ||||||||||| |||   ||| ||||||||||||| |||| ||||| ||||||||||||||||||||||||||| ||||| ||||||||||||    
T  21945609 acactcctcggattaggcgtgttgcggtgtcggacatgtgtcatgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaattattag 21945510  T
Q  236 c 236  Q
    |    
T  21945509 c 21945509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 123 - 234
Target Start/End: Complemental strand, 16073513 - 16073403
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||||| | |||||| ||||||||||| |||| | || |||||||||| ||||||| ||||| ||||||||||||||||||||||||||  |||||    
T  16073513 ctatgaagcatggacactcctcggattaggcgtgtcttagtgtcggacatgtatcgtgtccgacaccgacacttgtaattacactgaattatgcgatttt 16073414  T
Q  223 ctcaaattatta 234  Q
     |||||||||||    
T  16073413 -tcaaattatta 16073403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 29205531 - 29205450
Alignment:
Q  155 tgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    ||||| ||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||| ||||| |||||||||||||    
T  29205531 tgtcccggtgtcggacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 29205450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 12895214 - 12895325
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    ||||||||||||||||||| ||||||||||| ||||| | | ||||| |  ||||||||| ||||| ||||||| |||||||||  |||||||| |||||    
T  12895214 ctatgaagcacgaacactcctcggattaggcgtgtcccgatgtcggatacatgtcgtgtccgacaccgacacttataattacacaaaattatgtgatttt 12895313  T
Q  223 ctcaaattatta 234  Q
     |||||||||||    
T  12895314 ttcaaattatta 12895325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 146 - 236
Target Start/End: Original strand, 38846975 - 38847065
Alignment:
Q  146 gattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    ||||||| |||| ||||| ||||||| ||||||| || |||||||||||||||||||||||||||| || | ||||| |||||||||||||    
T  38846975 gattaggtatgttctggtgtcggacacgtgtcgtatccgacactgacacttgtaattacactgaataatatgattttttcaaattattagc 38847065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 2361915 - 2362028
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||||||| |||||| || |||||||  ||||  ||| || |||| | |||||||| ||||| ||||||| |||||||||| ||||||||||||||    
T  2361915 ctatgaagcacggacactcgtcagattaggtgtgtctcggtgtcagacacgagtcgtgtccgacaccgacacttttaattacactaaattatgtaatttt 2362014  T
Q  223 ctcaaattattagc 236  Q
     |||||||||||||    
T  2362015 ttcaaattattagc 2362028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 35157924 - 35158037
Alignment:
Q  122 actatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattt 221  Q
    ||||||||||||| |||||  |||||||| || ||| | ||| | |||||||||||||||| ||||| ||||||| |||||||||| |||||||| ||||    
T  35157924 actatgaagcacggacacttctcggattaagcgtgttccggtgttggacatgtgtcgtgtcagacaccgacacttataattacactaaattatgtgattt 35158023  T
Q  222 tctcaaattattag 235  Q
    |  |||||||||||    
T  35158024 ttccaaattattag 35158037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 235
Target Start/End: Original strand, 34306744 - 34306855
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||||||||||| || || |||||||| ||||  ||| ||||||| |||||||||| ||||| ||||||||||||||||||  ||||| | |||||    
T  34306744 ctatgaagcacgaacattcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactacattatctgatttt 34306843  T
Q  223 ctcaaattattag 235  Q
     ||||||||||||    
T  34306844 -tcaaattattag 34306855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 123 - 235
Target Start/End: Original strand, 7214466 - 7214574
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    ||||||||||| |||| |||||||||||||||| ||| ||| ||||||||||||||||    |||| ||| | | |||||||| | |||||||| |||||    
T  7214466 ctatgaagcacaaacaatcatcggattaggcatttcccggtgtcggacatgtgtcgtg----acaccgacgcatataattacattaaattatgtgatttt 7214561  T
Q  223 ctcaaattattag 235  Q
    |||||||||||||    
T  7214562 ctcaaattattag 7214574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 228
Target Start/End: Original strand, 8402705 - 8402787
Alignment:
Q  145 ggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaa 228  Q
    ||||||||||||||||| | ||||||| ||||||||||||||||||| || | ||||||||||||||||| | |||||||||||    
T  8402705 ggattaggcatgtcctg-tgtcggacaagtgtcgtgtctgacactgagacatataattacactgaattatatgattttctcaaa 8402787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 123 - 235
Target Start/End: Complemental strand, 36635449 - 36635331
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacact------gacacttgtaattacactgaattatgt 216  Q
    |||||||||||| |||||| ||||||||||| ||||| ||| || |||  |||||||||||||||||       |||| | |||||||||||||||||||    
T  36635449 ctatgaagcacggacactcttcggattaggcgtgtcccggtgtctgacgcgtgtcgtgtctgacactcacacgaacacatataattacactgaattatgt 36635350  T
Q  217 aattttctcaaattattag 235  Q
     ||||||||||||||||||    
T  36635349 gattttctcaaattattag 36635331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 123 - 249
Target Start/End: Complemental strand, 49431145 - 49431018
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgt-aattt 221  Q
    |||| ||||| | |||||| |||||| |||| ||||| ||| | ||||| |||||||||| ||||| ||||||| ||||||||||||||||||| | |||    
T  49431145 ctataaagcatggacactcctcggataaggcgtgtcccggtgttggacacgtgtcgtgtccgacaccgacacttttaattacactgaattatgtgatttt 49431046  T
Q  222 tctcaaattattagcgatgtcgacgtgt 249  Q
    | |||||||||||||  ||||| |||||    
T  49431045 tttcaaattattagctgtgtcggcgtgt 49431018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 123 - 222
Target Start/End: Original strand, 715545 - 715646
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgt--ctgacactgacacttgtaattacactgaattatgtaatt 220  Q
    |||||||||||| |||||| ||||||||||| |||||  || |||||||||||||||||    |||||  |||||||||||||||||||||||||| |||    
T  715545 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatgtgatt 715644  T
Q  221 tt 222  Q
    ||    
T  715645 tt 715646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 123 - 222
Target Start/End: Original strand, 752871 - 752972
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgt--ctgacactgacacttgtaattacactgaattatgtaatt 220  Q
    |||||||||||| |||||| ||||||||||| |||||  || |||||||||||||||||    |||||  |||||||||||||||||||||||||| |||    
T  752871 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatgtgatt 752970  T
Q  221 tt 222  Q
    ||    
T  752971 tt 752972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 260
Target Start/End: Original strand, 40179575 - 40179713
Alignment:
Q  122 actatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattt 221  Q
    ||||| ||||||||| | |  ||||||||||| |||| |||| ||| |||||||||||||| ||||| ||| | | ||||||||||||||||||| ||||    
T  40179575 actatcaagcacgaataattctcggattaggcgtgtcatggtgtcgaacatgtgtcgtgtccgacaccgacgcatataattacactgaattatgtgattt 40179674  T
Q  222 tctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    | ||||| |||||  | |||| |||||| ||||| ||||    
T  40179675 tttcaaactattaatggtgtcaacgtgtcagtgtccgtg 40179713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 243
Target Start/End: Original strand, 11135289 - 11135354
Alignment:
Q  178 gtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcg 243  Q
    |||||||||| |||||| |||||||| | |||||||||||||||||||||| ||||||||||||||    
T  11135289 gtgtctgacagtgacacatgtaattatattgaattatgtaattttctcaaactattagcgatgtcg 11135354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 123 - 224
Target Start/End: Complemental strand, 35161155 - 35161054
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||||||| |||||  ||||||||||  ||| | ||| ||||||| |||||||||| ||| |||| |||| ||||||||||||||||||| |||||    
T  35161155 ctatgaagcacggacacttttcggattaggtgtgttccggtgtcggacacgtgtcgtgtccgactctgatacttataattacactgaattatgtgatttt 35161056  T
Q  223 ct 224  Q
    ||    
T  35161055 ct 35161054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 54580006 - 54580075
Alignment:
Q  166 cggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    |||||| |||||||||| ||||| ||||||| ||||||||||||||||||| ||||| ||||||||||||    
T  54580006 cggacacgtgtcgtgtccgacaccgacacttataattacactgaattatgtgattttttcaaattattag 54580075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 123 - 222
Target Start/End: Complemental strand, 42640643 - 42640549
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||||||| | |||| ||||||||||| |||||||||  ||||||     |||||| ||||| ||||||||||||||||||||||||||| |||||    
T  42640643 ctatgaagcacggaaactcctcggattaggcgtgtcctggtgccggaca-----cgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 42640549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 4157226 - 4157157
Alignment:
Q  165 tcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    |||||||||||||||||| ||||| ||||||||||||| |||| |||||||| ||||| ||||||||||||    
T  4157226 tcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatgtgatttt-tcaaattattag 4157157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 184 - 237
Target Start/End: Complemental strand, 848009 - 847956
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcg 237  Q
    ||||| |||||||||||||| | |||||||||||||||||||||||||||||||    
T  848009 gacaccgacacttgtaattatagtgaattatgtaattttctcaaattattagcg 847956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 51701316 - 51701264
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    |||||| ||||||||||||||||| |||||||||||||| |||||||||||||    
T  51701316 gacactaacacttgtaattacactcaattatgtaattttttcaaattattagc 51701264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 243
Target Start/End: Original strand, 23861369 - 23861491
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacac--ttgtaattacactgaattatgtaatt 220  Q
    ||||||||||||||||||| | | ||||||| |||| ||||  | |||||||||||| |||||||| |||||   | |||||||| ||||| |||| |||    
T  23861369 ctatgaagcacgaacactctttgaattaggcgtgtcttggtgacagacatgtgtcgtatctgacaccgacacatatataattacattgaatcatgtgatt 23861468  T
Q  221 ttctcaaattattagcgatgtcg 243  Q
    || |||| ||||||||| |||||    
T  23861469 ttatcaatttattagcggtgtcg 23861491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 249
Target Start/End: Original strand, 24613630 - 24613767
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgaca-----------cttgtaattacactgaat 211  Q
    |||||||||||| |||||| | ||||||| | ||||||||| || |||| |||||||||||||||| ||||           |||||| ||||| |||||    
T  24613630 ctatgaagcacggacactcctaggattagacgtgtcctggtgtcagacacgtgtcgtgtctgacaccgacatgacaccgacacttgtacttacattgaat 24613729  T
Q  212 tatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    ||||| ||||||||||||||||||   |||||||||||    
T  24613730 tatgtgattttctcaaattattagttgtgtcgacgtgt 24613767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 182
Target Start/End: Complemental strand, 29205587 - 29205528
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtc 182  Q
    ||||||||||||||||||| ||||||||||| |||||  || ||||||||||||||||||    
T  29205587 ctatgaagcacgaacactcctcggattaggcgtgtcccagtgtcggacatgtgtcgtgtc 29205528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 249
Target Start/End: Complemental strand, 47264116 - 47263979
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacact-----------gacacttgtaattacactgaat 211  Q
    |||||||||||  || ||| ||||||||||| ||||||||| || |||||||||||| ||||||||            |||| |||||||||||| ||||    
T  47264116 ctatgaagcacagacgctcttcggattaggcgtgtcctggtgtcagacatgtgtcgtatctgacaccaacatgacatcgacatttgtaattacacagaat 47264017  T
Q  212 tatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    ||||| |||||  |||||||||||| ||||||||||||    
T  47264016 tatgtgatttttacaaattattagctatgtcgacgtgt 47263979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 222
Target Start/End: Complemental strand, 4157542 - 4157456
Alignment:
Q  136 acactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||| ||| ||||||| | ||  ||| |||||||||||||||||| ||||| ||||||||||||| |||| |||||||| |||||    
T  4157542 acactcctcgaattaggcgtttctcggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatgtgatttt 4157456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 150 - 228
Target Start/End: Complemental strand, 13307969 - 13307891
Alignment:
Q  150 aggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaa 228  Q
    ||||||||| |||| || |||| |||||||||| |||||  |||||||| |||||| |||||||||| |||||||||||    
T  13307969 aggcatgtcatggtgtctgacacgtgtcgtgtccgacaccaacacttgtgattacattgaattatgtcattttctcaaa 13307891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 237
Target Start/End: Original strand, 30982808 - 30982932
Alignment:
Q  124 tatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacac-----------ttgtaattacactgaatt 212  Q
    ||||||||||| |||||| | ||||||||| ||||| ||| ||||||| |||||||||||||||| |||||           || ||||||||||||| |    
T  30982808 tatgaagcacggacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacgacaccgacacttataattacactgaaat 30982907  T
Q  213 atgtaattttctcaaattattagcg 237  Q
    |||| |||||||||||| |||||||    
T  30982908 atgtgattttctcaaatcattagcg 30982932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 236
Target Start/End: Original strand, 11596360 - 11596405
Alignment:
Q  191 acacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||    
T  11596360 acacttgtaattacactgaattatgtgattttttcaaattattagc 11596405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 234
Target Start/End: Complemental strand, 24343632 - 24343515
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcg-tgtctgacactgacact-----tgtaattacactgaattatgt 216  Q
    |||||||||||| |||||| || || ||||| ||||| ||| ||||||| | |||| |||| ||||| |||||      | |||||||||||||||||||    
T  24343632 ctatgaagcacggacactcctcagaataggcgtgtcccggtgtcggacacgcgtcggtgtcggacaccgacacgacacctataattacactgaattatgt 24343533  T
Q  217 aattttctcaaattatta 234  Q
    ||||||||||||||||||    
T  24343532 aattttctcaaattatta 24343515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 30299005 - 30298928
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgt-aattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||| ||||||||||||||||||||||||||| | |||| |||||||||||||  ||||| ||||| ||||| ||||    
T  30299005 gacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 30298928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 30327873 - 30327796
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgt-aattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||| ||||||||||||||||||||||||||| | |||| |||||||||||||  ||||| ||||| ||||| ||||    
T  30327873 gacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 30327796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 35723385 - 35723457
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgta-attttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    ||||||||||| | |||||||| ||||||||||  |||||||||||||||||||| ||||| ||||| |||||    
T  35723385 gacactgacacatataattacattgaattatgtgtattttctcaaattattagcggtgtcggcgtgtcagtgt 35723457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 37698756 - 37698712
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtc 242  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||    
T  37698756 taattacactgaattatataattttctcaaattattagagatgtc 37698712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 4383425 - 4383375
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    |||||||||| |||||||||||||||||||||| ||||| ||||||||||||    
T  4383425 gacactgacatttgtaattacactgaattatgtgatttt-tcaaattattag 4383375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 255
Target Start/End: Complemental strand, 20633534 - 20633472
Alignment:
Q  190 gacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    |||||||||||||||| ||||||||||   ||| |||||||||||||| ||||||||||| |||||    
T  20633534 gacacttgtaattacattgaattatgt---tttttcaaattattagcggtgtcgacgtgtcagtgt 20633472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 194
Target Start/End: Original strand, 22234819 - 22234890
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacac 194  Q
    ||||||||||||||||||  |||||||||   ||||||||| ||||||| |||||||||| ||||| |||||    
T  22234819 ctatgaagcacgaacacttctcggattagctgtgtcctggtgtcggacacgtgtcgtgtcagacaccgacac 22234890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 233
Target Start/End: Original strand, 30103296 - 30103406
Alignment:
Q  122 actatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattt 221  Q
    |||||||||||   |||||| |||||||||   ||||||| | || ||||| |||||||| |||||| ||||| | | |||||||| |||||||| ||||    
T  30103296 actatgaagcagagacactcctcggattagatgtgtcctgatgtcagacatatgtcgtgtttgacaccgacacatatgattacact-aattatgtgattt 30103394  T
Q  222 tctcaaattatt 233  Q
    ||||||||||||    
T  30103395 tctcaaattatt 30103406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 249
Target Start/End: Complemental strand, 40613494 - 40613443
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    ||||||||||||||||||| ||||||||||| |||||||| ||||| |||||    
T  40613494 taattacactgaattatgtgattttctcaaaatattagcggtgtcggcgtgt 40613443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 14126117 - 14126183
Alignment:
Q  189 tgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    |||||||| ||||||||||||||||||| | ||| ||||||||||| |  ||||| |||||||||||    
T  14126117 tgacacttataattacactgaattatgtgactttatcaaattattaacagtgtcggcgtgttagtgt 14126183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 200 - 258
Target Start/End: Original strand, 20743295 - 20743353
Alignment:
Q  200 attacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcg 258  Q
    ||||||||||||||||| ||||||||||||||||| |  ||||| ||||| ||||||||    
T  20743295 attacactgaattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgttcg 20743353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 198 - 244
Target Start/End: Original strand, 22440615 - 22440661
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcga 244  Q
    ||||||||||||||||||| ||||||||||||||||| || ||||||    
T  22440615 taattacactgaattatgtgattttctcaaattattaacggtgtcga 22440661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 260
Target Start/End: Complemental strand, 33950200 - 33950118
Alignment:
Q  178 gtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||||||||| ||||| | | |||||| | |||||||| ||||||||||||||||||||  || || |||| ||||||||||    
T  33950200 gtgtctgacaccgacacatatgattacattaaattatgtgattttctcaaattattagcggcgttgaagtgtcagtgttcgtg 33950118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 6485613 - 6485662
Alignment:
Q  185 acactgacacttgtaattacactgaattatgtaattttctcaaattatta 234  Q
    |||| |||||||||||||||||| |||||||| ||||| |||||||||||    
T  6485613 acaccgacacttgtaattacactaaattatgtgattttttcaaattatta 6485662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 18513175 - 18513292
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcg-tgtctgacac-----tgacacttgtaattacactgaattatgt 216  Q
    |||||||||||| |||||| || |||||||| ||||||||| |||||||   |||| |||| |||||     |||||| | | |||||| ||||||||||    
T  18513175 ctatgaagcacggacactcctcagattaggcgtgtcctggtgtcggacacacgtcggtgtccgacacaacactgacacatatgattacattgaattatgt 18513274  T
Q  217 aattttctcaaattatta 234  Q
     |||||||||||||||||    
T  18513275 cattttctcaaattatta 18513292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 236
Target Start/End: Complemental strand, 37203315 - 37203270
Alignment:
Q  191 acacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    ||||||||||||||||| |||||||| ||||| |||||||||||||    
T  37203315 acacttgtaattacactaaattatgtcattttttcaaattattagc 37203270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 244
Target Start/End: Original strand, 38148741 - 38148786
Alignment:
Q  199 aattacactgaattatgtaattttctcaaattattagcgatgtcga 244  Q
    |||||||||||||||||| ||||||||||| |||||||| ||||||    
T  38148741 aattacactgaattatgtgattttctcaaactattagcggtgtcga 38148786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 234
Target Start/End: Complemental strand, 903966 - 903930
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattatta 234  Q
    ||||||||||||||||||| |||||||||||||||||    
T  903966 taattacactgaattatgtgattttctcaaattatta 903930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 254
Target Start/End: Complemental strand, 1747256 - 1747200
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtg 254  Q
    |||||| |||||||||||| |||||||||| ||||||||| ||||| ||||| ||||    
T  1747256 taattaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtg 1747200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 233
Target Start/End: Complemental strand, 9996917 - 9996849
Alignment:
Q  165 tcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattatt 233  Q
    ||||||| ||||  |||||||||| || || | |||||| |||||||||||| ||||||||||||||||    
T  9996917 tcggacacgtgttatgtctgacaccgagacatataattatactgaattatgtgattttctcaaattatt 9996849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 11651142 - 11651206
Alignment:
Q  191 acacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    ||||||||| || ||||||||||||| ||||| | |||||||||||  ||||||||||| |||||    
T  11651142 acacttgtagttgcactgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgt 11651206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 12895117 - 12895169
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    ||||| |||||||||||||||  |||||||||| ||||| |||||||||||||    
T  12895117 gacaccgacacttgtaattactttgaattatgtgattttttcaaattattagc 12895169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 234
Target Start/End: Complemental strand, 32910595 - 32910559
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattatta 234  Q
    ||||||||||||||||||| |||||||||||||||||    
T  32910595 taattacactgaattatgtcattttctcaaattatta 32910559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 40481687 - 40481644
Alignment:
Q  191 acacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||    
T  40481687 acacttgtaattacactgaattatgtgatttt-tcaaattattag 40481644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 233
Target Start/End: Original strand, 46715416 - 46715524
Alignment:
Q  126 tgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtc-gtgtctgacactgacacttgtaattacactgaattatgtaattttct 224  Q
    |||||||||||||||| ||||||||| ||||| | ||| ||||||| | | | ||||| ||||| ||||  | ||| |||| |||||||||| ||| |||    
T  46715416 tgaagcacgaacactcctcggattagacatgtgccggtgtcggacacgcggcagtgtccgacacagacaaatataactacattgaattatgtgattgtct 46715515  T
Q  225 caaattatt 233  Q
    |||||||||    
T  46715516 caaattatt 46715524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 5775358 - 5775409
Alignment:
Q  183 tgacactgacacttgtaattacactgaattatgtaattttctcaaattatta 234  Q
    |||||| ||||| | |||||||||| |||||||| |||||||||||||||||    
T  5775358 tgacaccgacacatataattacacttaattatgtgattttctcaaattatta 5775409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 10499259 - 10499314
Alignment:
Q  172 tgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaa 227  Q
    ||||||| ||| ||||||||||| | |||||||||| |||||||| ||||||||||    
T  10499259 tgtgtcgggtccgacactgacacatataattacactaaattatgtgattttctcaa 10499314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 237
Target Start/End: Complemental strand, 16189753 - 16189714
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcg 237  Q
    ||||||||||||||||||| ||||||||||||| ||||||    
T  16189753 taattacactgaattatgtgattttctcaaatttttagcg 16189714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 182
Target Start/End: Complemental strand, 19482798 - 19482739
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtc 182  Q
    ||||||||||||||||||| ||||||||||  |||||  || ||||||| ||||||||||    
T  19482798 ctatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacgtgtcgtgtc 19482739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 21345473 - 21345584
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||||||  | |||| ||||||||||||||| | ||| | ||| |||| ||||||||||||| ||||    | |||||| ||| |||||| |||||    
T  21345473 ctatgaagcacacatactcctcggattaggcatgtaccggtgttggatatgtatcgtgtctgacaccgacataaatgattacattgagttatgttatttt 21345572  T
Q  223 ctcaaattatta 234  Q
     |||||||||||    
T  21345573 ttcaaattatta 21345584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 27706178 - 27706249
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    |||||| ||||||||||||||||| |||||||| ||||| | |||||||||    ||||||||||| |||||    
T  27706178 gacactcacacttgtaattacactaaattatgtgatttttttaaattattaattgtgtcgacgtgtcagtgt 27706249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 34515892 - 34515951
Alignment:
Q  201 ttacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    |||||||||||||||| |||||||  |||||||| |  ||||||||||| ||||||||||    
T  34515892 ttacactgaattatgtcattttcttgaattattatccgtgtcgacgtgtcagtgttcgtg 34515951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 44362735 - 44362680
Alignment:
Q  173 gtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaa 228  Q
    ||||||||||||||||  |||||||| |||||| | |||||||| |||||||||||    
T  44362735 gtgtcgtgtctgacaccaacacttgtgattacattaaattatgtcattttctcaaa 44362680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 244
Target Start/End: Original strand, 999363 - 999409
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcga 244  Q
    |||||||||| |||||| | |||| ||||||||||||||||||||||    
T  999363 taattacactaaattatatgatttactcaaattattagcgatgtcga 999409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 236
Target Start/End: Original strand, 4672104 - 4672138
Alignment:
Q  202 tacactgaattatgtaattttctcaaattattagc 236  Q
    |||||||||||||||||||||| ||||||||||||    
T  4672104 tacactgaattatgtaattttcccaaattattagc 4672138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 249
Target Start/End: Complemental strand, 7012105 - 7012059
Alignment:
Q  203 acactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    |||||||||||||| ||||||||||||||||| || ||||| |||||    
T  7012105 acactgaattatgtcattttctcaaattattatcggtgtcggcgtgt 7012059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 17425386 - 17425441
Alignment:
Q  178 gtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    ||||||||||| ||||| |  |||||||||||||||||  ||||||||||||||||||    
T  17425386 gtgtctgacacagacacat--aattacactgaattatgcgattttctcaaattattag 17425441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 256
Target Start/End: Original strand, 19230324 - 19230382
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgtt 256  Q
    |||||||| |||||||||| ||||||||||||||||| | ||||| | |||| ||||||    
T  19230324 taattacattgaattatgttattttctcaaattattatctatgtccatgtgtcagtgtt 19230382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 243
Target Start/End: Complemental strand, 23700508 - 23700466
Alignment:
Q  201 ttacactgaattatgtaattttctcaaattattagcgatgtcg 243  Q
    ||||||||||||||||||||||||||| ||| ||||| |||||    
T  23700508 ttacactgaattatgtaattttctcaatttactagcgttgtcg 23700466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 194
Target Start/End: Complemental strand, 30838335 - 30838269
Alignment:
Q  128 aagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacac 194  Q
    ||||||| |||||| |||| |||||| |||| |||| ||||||| |||||| ||| |||||||||||    
T  30838335 aagcacggacactcctcgggttaggcgtgtcttggtgtcggacacgtgtcgcgtccgacactgacac 30838269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 234
Target Start/End: Original strand, 31243565 - 31243599
Alignment:
Q  200 attacactgaattatgtaattttctcaaattatta 234  Q
    ||||||||||||||||| |||||||||||||||||    
T  31243565 attacactgaattatgtcattttctcaaattatta 31243599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 37496761 - 37496691
Alignment:
Q  185 acactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    |||| ||||||||| |||||| |||||||||| |||||||||||  |||| || |||| |||||| |||||    
T  37496761 acaccgacacttgtgattacattgaattatgtcattttctcaaaaaattatcggtgtcaacgtgtcagtgt 37496691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 234
Target Start/End: Original strand, 43299988 - 43300022
Alignment:
Q  200 attacactgaattatgtaattttctcaaattatta 234  Q
    |||||| ||||||||||||||||||||||||||||    
T  43299988 attacattgaattatgtaattttctcaaattatta 43300022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 234
Target Start/End: Complemental strand, 43300658 - 43300624
Alignment:
Q  200 attacactgaattatgtaattttctcaaattatta 234  Q
    |||||| ||||||||||||||||||||||||||||    
T  43300658 attacattgaattatgtaattttctcaaattatta 43300624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 236
Target Start/End: Complemental strand, 56257977 - 56257939
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagc 236  Q
    ||||||||||||||||| | |||||||||||||||||||    
T  56257977 taattacactgaattatatgattttctcaaattattagc 56257939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 222
Target Start/End: Original strand, 6879459 - 6879504
Alignment:
Q  177 cgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||| ||||| |||||||||||||||||| |||||||| |||||    
T  6879459 cgtgtccgacaccgacacttgtaattacacttaattatgtgatttt 6879504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 8820443 - 8820394
Alignment:
Q  207 tgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgtt 256  Q
    |||||||||| ||||| ||||||||||| |||||| ||||||| ||||||    
T  8820443 tgaattatgtgattttatcaaattattatcgatgttgacgtgtcagtgtt 8820394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 124 - 235
Target Start/End: Original strand, 14465006 - 14465127
Alignment:
Q  124 tatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacac-----tgacact-----tgtaattacactgaatta 213  Q
    ||||||||||| |||||| || |||||| | |||||  || ||| ||| ||||||||||||||||     |||||||     |||||||||| |||||||    
T  14465006 tatgaagcacggacactcctcagattagacgtgtcccagtgtcgaacacgtgtcgtgtctgacacggcactgacacttgtaatgtaattacattgaatta 14465105  T
Q  214 tgtaattttctcaaattattag 235  Q
    ||| ||||| ||||||||||||    
T  14465106 tgtgattttttcaaattattag 14465127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 44796975 - 44797012
Alignment:
Q  196 tgtaattacactgaattatgtaattttctcaaattatt 233  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  44796975 tgtaattacattgaattatgttattttctcaaattatt 44797012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 46180953 - 46180986
Alignment:
Q  200 attacactgaattatgtaattttctcaaattatt 233  Q
    ||||||||||||||||| ||||||||||||||||    
T  46180953 attacactgaattatgttattttctcaaattatt 46180986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 249
Target Start/End: Complemental strand, 48139346 - 48139257
Alignment:
Q  160 tggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    |||| ||| |||||||||||||||||||   |||| | |||||||| | |||||||  ||| ||||||||||||| |  |||||||||||    
T  48139346 tggtgtcgaacatgtgtcgtgtctgacatcaacacatataattacattaaattatgagattatctcaaattattaacagtgtcgacgtgt 48139257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 19482719 - 19482675
Alignment:
Q  191 acacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    |||||||||||||||| ||||||||| || || ||||||||||||    
T  19482719 acacttgtaattacaccgaattatgtgatattttcaaattattag 19482675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 159
Target Start/End: Complemental strand, 28470484 - 28470448
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcc 159  Q
    |||||||||||| |||||| |||||||||||||||||    
T  28470484 ctatgaagcacggacactcctcggattaggcatgtcc 28470448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 237
Target Start/End: Original strand, 30522933 - 30522969
Alignment:
Q  201 ttacactgaattatgtaattttctcaaattattagcg 237  Q
    |||||||||||||||| |||||||||||| |||||||    
T  30522933 ttacactgaattatgtgattttctcaaataattagcg 30522969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 31800463 - 31800531
Alignment:
Q  168 gacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    ||||| ||||||||  || || |||||||||||||||| | |||||| ||||||| | |||||||||||    
T  31800463 gacatctgtcgtgtacgataccgacacttgtaattacattaaattatttaattttttaaaattattagc 31800531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 234
Target Start/End: Original strand, 36386226 - 36386262
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattatta 234  Q
    |||||||||||||||||||  ||||||||||||||||    
T  36386226 taattacactgaattatgtccttttctcaaattatta 36386262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 1e-31; HSPs: 81)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 123 - 248
Target Start/End: Complemental strand, 27932354 - 27932229
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    ||||||||||| ||||||| ||| ||||||| ||||||||| || |||| |||||||||| |||||  | | ||||||||||||||||||||||||||||    
T  27932354 ctatgaagcacaaacactcctcgaattaggcgtgtcctggtgtccgacacgtgtcgtgtccgacaccaagatttgtaattacactgaattatgtaatttt 27932255  T
Q  223 ctcaaattattagcgatgtcgacgtg 248  Q
    ||||||||||||||| ||||| ||||    
T  27932254 ctcaaattattagcggtgtcggcgtg 27932229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 30502330 - 30502442
Alignment:
Q  125 atgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttct 224  Q
    |||||||||||||| || | |||||||||||||||  || |||||||||||||||||| ||||| ||||| | |||||||||||||||| || |||||||    
T  30502330 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttct 30502429  T
Q  225 caaattattagcg 237  Q
    |||||||||||||    
T  30502430 caaattattagcg 30502442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 30542673 - 30542785
Alignment:
Q  125 atgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttct 224  Q
    |||||||||||||| || | |||||||||||||||  || |||||||||||||||||| ||||| ||||| | |||||||||||||||| || |||||||    
T  30542673 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttct 30542772  T
Q  225 caaattattagcg 237  Q
    |||||||||||||    
T  30542773 caaattattagcg 30542785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 125 - 236
Target Start/End: Original strand, 21190998 - 21191109
Alignment:
Q  125 atgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttct 224  Q
    |||||||||| |||||| ||||||||||| ||||| ||  ||||||| |||| ||||| ||||| ||||||||||||||||||||||||||| ||||| |    
T  21190998 atgaagcacggacactcctcggattaggcgtgtcccggagtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgatttttt 21191097  T
Q  225 caaattattagc 236  Q
    ||||||||||||    
T  21191098 caaattattagc 21191109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 123 - 249
Target Start/End: Original strand, 28588614 - 28588740
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||||| | |||||| |||||||| || ||||||||| || || |||||||||||| ||||| ||||| | ||||||||||||||||||| |||||    
T  28588614 ctatgaagcatggacactcttcggattaagcgtgtcctggtgtcagatatgtgtcgtgtccgacaccgacacctataattacactgaattatgtgatttt 28588713  T
Q  223 ctcaaattattagcgatgtcgacgtgt 249  Q
    |||||||||||| || ||||| |||||    
T  28588714 ctcaaattattaccggtgtcggcgtgt 28588740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 21576685 - 21576798
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||||||| |||||| ||||||||||| |||||  || || |||| |||||||||| ||||  ||||||||||||||||||||||||||| |||||    
T  21576685 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacatcgacacttgtaattacactgaattatgtgatttt 21576784  T
Q  223 ctcaaattattagc 236  Q
     |||||||||||||    
T  21576785 ttcaaattattagc 21576798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 123 - 236
Target Start/End: Complemental strand, 42893479 - 42893366
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||||| | |||||| ||  ||||||| ||||||||| ||||||| |||| ||||||||||| ||||||||||||||||||| ||||||| |||||    
T  42893479 ctatgaagcatggacactcctcatattaggcgtgtcctggtgtcggacacgtgttgtgtctgacaccgacacttgtaattacactggattatgtgatttt 42893380  T
Q  223 ctcaaattattagc 236  Q
     |||||||||||||    
T  42893379 ttcaaattattagc 42893366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 178 - 260
Target Start/End: Original strand, 6326292 - 6326374
Alignment:
Q  178 gtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| ||||    
T  6326292 gtgtccgacgctgacacttgtaattacactgaattatgtaattttctcaaattactagcgatgtcggcgtgtcagtgtccgtg 6326374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 123 - 255
Target Start/End: Complemental strand, 31084447 - 31084310
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacact-----gacacttgtaattacactgaattatgta 217  Q
    ||||||| |||| |||||| |||||||||||||||||  || ||||||| |||||||||| |||||      |||||||||||||||| ||||||||||     
T  31084447 ctatgaaccacggacactcctcggattaggcatgtcccagtgtcggacacgtgtcgtgtccgacacgacatcgacacttgtaattacattgaattatgtg 31084348  T
Q  218 attttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    ||||| |||||||||||||  ||||| ||||| |||||    
T  31084347 attttttcaaattattagctgtgtcggcgtgtcagtgt 31084310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 125 - 260
Target Start/End: Complemental strand, 43001922 - 43001782
Alignment:
Q  125 atgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactg-----acacttgtaattacactgaattatgtaat 219  Q
    |||||||||| |||||| ||||||||||| ||||| ||| |  |||| |||||||||| |||||       |||||||||||||||||||||||||||||    
T  43001922 atgaagcacggacactcctcggattaggcgtgtccaggtgtttgacacgtgtcgtgtccgacacatcaccaacacttgtaattacactgaattatgtaat 43001823  T
Q  220 tttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||| |||||||||||||  ||||||| ||| ||||| ||||    
T  43001822 tttttcaaattattagcagtgtcgacatgtcagtgtccgtg 43001782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 123 - 232
Target Start/End: Complemental strand, 43565000 - 43564891
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||||||| |||||  ||||||||||| ||||| ||  |||||||  ||||||||| ||||| ||||||| |||||||||| |||||||| |||||    
T  43565000 ctatgaagcacggacacttctcggattaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacacttataattacactaaattatgtgatttt 43564901  T
Q  223 ctcaaattat 232  Q
      ||||||||    
T  43564900 tccaaattat 43564891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 260
Target Start/End: Original strand, 13287400 - 13287476
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||| |||||||||| |||||||||||||||| ||||| ||||||||||| |  ||||||||||||||||| ||||    
T  13287400 gacaccgacacttgtagttacactgaattatgtgattttttcaaattattatctgtgtcgacgtgttagtgtccgtg 13287476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 39698599 - 39698547
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  39698599 gacactgacacttgtaattacactgaattatgtgattttttcaaattattagc 39698547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 6247687 - 6247629
Alignment:
Q  177 cgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    |||||| ||||| ||||||||||||||||||||||||||| ||||| ||||||||||||    
T  6247687 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 6247629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 243
Target Start/End: Complemental strand, 12927723 - 12927653
Alignment:
Q  173 gtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcg 243  Q
    ||||| |||||||||||||||  | |||||||||| |||||| | ||||||||||||||||||||||||||    
T  12927723 gtgtcatgtctgacactgacatatataattacactaaattatatgattttctcaaattattagcgatgtcg 12927653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 249
Target Start/End: Complemental strand, 4105374 - 4105250
Alignment:
Q  127 gaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaa--ttttct 224  Q
    |||||||| |||||| ||||||||||| |||||  ||||| ||||  | ||| |||||| ||  |||||||||||||||||||||||||| |  |||| |    
T  4105374 gaagcacggacactcctcggattaggcgtgtcccagtatcagacacatatcgagtctgatacctacacttgtaattacactgaattatgtgatctttttt 4105275  T
Q  225 caaattattagcgatgtcgacgtgt 249  Q
    |||||||||||  |||||| |||||    
T  4105274 caaattattagttatgtcggcgtgt 4105250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 8420085 - 8420020
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    ||||| |||||||||||||||| |||||||||| ||||| ||||||||||||| |||||| |||||    
T  8420085 gacaccgacacttgtaattacattgaattatgttattttttcaaattattagctatgtcggcgtgt 8420020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 255
Target Start/End: Complemental strand, 17123167 - 17123035
Alignment:
Q  122 actatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattt 221  Q
    ||||||||||||| |||||| ||||||||||| ||||| | | |||||||||| |||||||  |||| ||||  | |||||  |||  ||||||| ||||    
T  17123167 actatgaagcacggacactcctcggattaggcgtgtcccg-tgtcggacatgtttcgtgtccaacaccgacatatataattgtacttgattatgtgattt 17123069  T
Q  222 tctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    |||||||||||||||| ||| | ||||| |||||    
T  17123068 tctcaaattattagcggtgttggcgtgtcagtgt 17123035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 21194063 - 21194176
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||| ||||||| |||||| ||||||||||| || || ||| || |||||||||||||||  ||||  | || | |||||||||||||| |||| |||||    
T  21194063 ctataaagcacggacactcctcggattaggcgtgccccggtgtctgacatgtgtcgtgtccaacaccaatacctataattacactgaatgatgtgatttt 21194162  T
Q  223 ctcaaattattagc 236  Q
    ||||||||| ||||    
T  21194163 ctcaaattactagc 21194176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 165 - 234
Target Start/End: Original strand, 32630717 - 32630786
Alignment:
Q  165 tcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattatta 234  Q
    ||||||| ||||||| || ||||||||||| | |||||||| |||||||| |||||||||||||||||||    
T  32630717 tcggacacgtgtcgtatccgacactgacacatataattacattgaattatataattttctcaaattatta 32630786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 199 - 255
Target Start/End: Complemental strand, 19438386 - 19438330
Alignment:
Q  199 aattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||| |||| |||||    
T  19438386 aattacactgaattatgtgattttctcaaattatcagcgatgtcgatgtgtcagtgt 19438330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 16374343 - 16374414
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    ||||| ||||| |||||||||||||| |||||| ||||| |  |||||||| ||||||||||||||||||||    
T  16374343 gacaccgacacatgtaattacactgatttatgttatttttttcaattattaacgatgtcgacgtgttagtgt 16374414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 260
Target Start/End: Complemental strand, 14674321 - 14674251
Alignment:
Q  190 gacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    |||||||||||||||||| |||||||| ||||| |||||||||||||  ||||| ||||| ||||| ||||    
T  14674321 gacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 14674251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 232
Target Start/End: Original strand, 18421824 - 18421890
Alignment:
Q  166 cggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattat 232  Q
    ||||||||||||||||| ||| | ||||| | ||||||||||| ||||||| |||||||||||||||    
T  18421824 cggacatgtgtcgtgtccgacgccgacacatataattacactggattatgtgattttctcaaattat 18421890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 260
Target Start/End: Original strand, 24906308 - 24906378
Alignment:
Q  190 gacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||| |  ||| | ||||| ||||||||||    
T  24906308 gacacttgtaattacactgaattatgtcattttttcaaattattatctgtgttggcgtgtcagtgttcgtg 24906378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 235
Target Start/End: Complemental strand, 6770616 - 6770550
Alignment:
Q  167 ggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    |||||||||||||||| ||||||||||| |  || ||||||||||||||| ||||||| ||||||||||    
T  6770616 ggacatgtgtcgtgtccgacactgacacat--aagtacactgaattatgtgattttcttaaattattag 6770550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 222
Target Start/End: Complemental strand, 15884057 - 15884008
Alignment:
Q  173 gtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||||| ||||| ||||||||||||||||||||||||||| |||||    
T  15884057 gtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 15884008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 233
Target Start/End: Complemental strand, 26312875 - 26312778
Alignment:
Q  136 acactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattatt 233  Q
    |||||| ||||||||||  ||||||||| || |||| || ||||||| ||||| || || | ||||||||||||||||  | ||||||||||||||||    
T  26312875 acactcctcggattaggtgtgtcctggtgtcagacacgtatcgtgtccgacaccgatacatataattacactgaattaattgattttctcaaattatt 26312778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 237
Target Start/End: Complemental strand, 36838601 - 36838548
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcg 237  Q
    ||||| ||||| | |||||||||| |||||||||||||||||||||||||||||    
T  36838601 gacaccgacacatataattacactaaattatgtaattttctcaaattattagcg 36838548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 260
Target Start/End: Complemental strand, 41600933 - 41600880
Alignment:
Q  207 tgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    |||||| ||||||||||||||||||||| | |||| ||||||||||||||||||    
T  41600933 tgaattgtgtaattttctcaaattattatcaatgttgacgtgttagtgttcgtg 41600880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 2548451 - 2548395
Alignment:
Q  178 gtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattatta 234  Q
    ||||| ||||| ||||||| | |||||||||||||||||||||||||| ||||||||    
T  2548451 gtgtccgacaccgacacttatgattacactgaattatgtaattttctctaattatta 2548395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 260
Target Start/End: Original strand, 16203784 - 16203872
Alignment:
Q  172 tgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    |||||| |||| ||||| ||||| | |||||||||| |||||||  |||||||||||||||||||  ||||| | ||||||||| ||||    
T  16203784 tgtgtcttgtccgacaccgacacatataattacactaaattatgagattttctcaaattattagcagtgtcggcatgttagtgtccgtg 16203872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 19579759 - 19579707
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    ||||| ||||||||||||| |||| |||||||| |||||||||||||||||||    
T  19579759 gacaccgacacttgtaattgcactaaattatgtgattttctcaaattattagc 19579707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 21522808 - 21522732
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||| |||| |||||||||||||||||||||| ||||| | |||||||||||  ||||| ||||| ||||| ||||    
T  21522808 gacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtg 21522732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 21533374 - 21533298
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||| |||| |||||||||||||||||||||| ||||| | |||||||||||  ||||| ||||| ||||| ||||    
T  21533374 gacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtg 21533298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 41633793 - 41633741
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    ||||| |||| |||||||||||||||||||||||| ||| |||||||||||||    
T  41633793 gacaccgacatttgtaattacactgaattatgtaaatttttcaaattattagc 41633741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 243
Target Start/End: Complemental strand, 3966561 - 3966502
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcg 243  Q
    ||||| ||||| | ||||||||||||||| ||| |||||||||||||||||||| |||||    
T  3966561 gacaccgacacatataattacactgaattgtgtgattttctcaaattattagcggtgtcg 3966502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 7218274 - 7218333
Alignment:
Q  190 gacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    ||||||||||||||||||||||||||| ||||  | |||||||||||  |||||||||||    
T  7218274 gacacttgtaattacactgaattatgtgatttatttaaattattagctctgtcgacgtgt 7218333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 249
Target Start/End: Complemental strand, 15382591 - 15382470
Alignment:
Q  136 acactcatcggattaggcatgtcctggtatcggacatgtgtcgtgt------ctgacactgacacttgtaattacactgaattatgtaa--ttttctcaa 227  Q
    |||||| ||||||||||| ||||| ||| |||||||||||||||||      | ||||| |||||||||||||| |||||||||| | |  |||| ||||    
T  15382591 acactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccaacaccgacaccgacacttgtaattatactgaattatatgattttttttcaa 15382492  T
Q  228 attattagcgatgtcgacgtgt 249  Q
    |||||||||  ||||| |||||    
T  15382491 attattagctgtgtcggcgtgt 15382470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 25863256 - 25863197
Alignment:
Q  190 gacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    ||||||| ||||||||||||||||| | |||||||||||||||||   ||||||||||||    
T  25863256 gacacttataattacactgaattatatcattttctcaaattattatacatgtcgacgtgt 25863197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 198 - 236
Target Start/End: Original strand, 6471904 - 6471942
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagc 236  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  6471904 taattacactgaattatgtgattttctcaaattattagc 6471942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 125 - 234
Target Start/End: Original strand, 7997108 - 7997217
Alignment:
Q  125 atgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtc-gtgtctgacactgacacttgtaattacactgaattatgtaattttc 223  Q
    ||||||||| ||||||  ||| ||||||  ||||||| | ||||||| | ||| ||||| ||||| ||||||| ||||||||||| ||||| | ||||||    
T  7997108 atgaagcacaaacacttctcgaattaggtgtgtcctgatgtcggacacgcgtcagtgtccgacac-gacacttataattacactgtattatatcattttc 7997206  T
Q  224 tcaaattatta 234  Q
    |||||||||||    
T  7997207 tcaaattatta 7997217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 183 - 237
Target Start/End: Original strand, 12264829 - 12264883
Alignment:
Q  183 tgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcg 237  Q
    ||||| |||||| | |||||||||||||| ||||||||||||||||| |||||||    
T  12264829 tgacattgacacatataattacactgaatcatgtaattttctcaaataattagcg 12264883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 236
Target Start/End: Original strand, 23012379 - 23012461
Alignment:
Q  154 atgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    |||||| ||| || |||||||||||||||  |||| ||||| | |||||||| | |||||| | |||||||||||||||||||    
T  23012379 atgtcccggtgtcagacatgtgtcgtgtccaacaccgacacatataattacattaaattatatgattttctcaaattattagc 23012461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 122 - 192
Target Start/End: Complemental strand, 30098457 - 30098387
Alignment:
Q  122 actatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgac 192  Q
    ||||||||||||| ||| || ||||||||||  ||||||||| || |||| |||||||||| |||||||||    
T  30098457 actatgaagcacggacattcctcggattaggtgtgtcctggtgtctgacacgtgtcgtgtccgacactgac 30098387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 42126304 - 42126387
Alignment:
Q  167 ggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttag 252  Q
    |||||| |||||||| ||||||| |||  | ||||||||||||||||  |||||||  ||||||||||||||||| || |||||||    
T  42126304 ggacatatgtcgtgtttgacactaacatatataattacactgaatta--taatttttgcaaattattagcgatgttgatgtgttag 42126387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 257
Target Start/End: Complemental strand, 4344784 - 4344727
Alignment:
Q  200 attacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttc 257  Q
    ||||||||||||||||| ||||| ||||||||||| || ||||  |||||||||||||    
T  4344784 attacactgaattatgtcattttttcaaattattatcggtgtcagcgtgttagtgttc 4344727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 27144507 - 27144450
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    |||||||||| |||||||| |||| ||||||||||||||| ||||| ||||| |||||    
T  27144507 taattacactaaattatgtgatttcctcaaattattagcggtgtcggcgtgtcagtgt 27144450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 33178089 - 33178032
Alignment:
Q  178 gtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    ||||| ||||| |||||||||||||||||| |||||||| ||||| | ||||||||||    
T  33178089 gtgtccgacaccgacacttgtaattacactaaattatgtgatttttttaaattattag 33178032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 171
Target Start/End: Complemental strand, 2437030 - 2436982
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggaca 171  Q
    ||||||||||||||||||| ||||||||||| |||| |||| |||||||    
T  2437030 ctatgaagcacgaacactcctcggattaggcgtgtcttggtgtcggaca 2436982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 7677763 - 7677711
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    ||||| ||||||| ||||| ||||||||||||| ||||| |||||||||||||    
T  7677763 gacaccgacacttctaattgcactgaattatgtgattttttcaaattattagc 7677711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 260
Target Start/End: Original strand, 15410465 - 15410525
Alignment:
Q  200 attacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    |||||||||||| || ||||||||| |||||||||||| ||||| ||||| ||||| ||||    
T  15410465 attacactgaatcatataattttcttaaattattagcggtgtcggcgtgtcagtgtccgtg 15410525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 21351905 - 21351957
Alignment:
Q  183 tgacactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    |||||| ||||||||||||||||||||||||||| | ||| || |||||||||    
T  21351905 tgacaccgacacttgtaattacactgaattatgtgactttttccaattattag 21351957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 23016004 - 23016048
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtc 242  Q
    ||||||||||||||||||| |||||||||||| |||| |||||||    
T  23016004 taattacactgaattatgtgattttctcaaatgattaacgatgtc 23016048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 31264490 - 31264446
Alignment:
Q  190 gacacttgtaattacactgaattatgtaattttctcaaattatta 234  Q
    ||||||| | ||||||||||||||||| |||||||||||||||||    
T  31264490 gacacttatgattacactgaattatgtcattttctcaaattatta 31264446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 194
Target Start/End: Complemental strand, 7677835 - 7677764
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacac 194  Q
    |||||||||||  || ||| ||||||||||| ||||| ||| ||||||||||| |||||| ||||| |||||    
T  7677835 ctatgaagcaccgactctcctcggattaggcgtgtcccggtgtcggacatgtgacgtgtcagacaccgacac 7677764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 10298627 - 10298556
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    ||||| |||||||||||||||| || ||||||| | ||| ||||||||||||   ||||| |||||||||||    
T  10298627 gacaccgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggcgtgttagtgt 10298556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 236
Target Start/End: Original strand, 17177013 - 17177076
Alignment:
Q  173 gtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    |||| |||||| |||| |||||||||||||||| |||||| | | ||||| |||||||||||||    
T  17177013 gtgttgtgtctaacaccgacacttgtaattacaatgaattttttgattttttcaaattattagc 17177076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 237
Target Start/End: Original strand, 17593737 - 17593776
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcg 237  Q
    |||||||||||||||| || ||||||||||||||||||||    
T  17593737 taattacactgaattacgtgattttctcaaattattagcg 17593776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 231
Target Start/End: Original strand, 21194194 - 21194253
Alignment:
Q  172 tgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaatta 231  Q
    ||||||||||| |||||| ||||   | ||||||||||||||||| ||||||||||||||    
T  21194194 tgtgtcgtgtccgacactaacaccaatgattacactgaattatgtgattttctcaaatta 21194253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 21542088 - 21542037
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    ||||| ||||||||||||||||||||||||||| || || | ||||||||||    
T  21542088 gacaccgacacttgtaattacactgaattatgttatctttttaaattattag 21542037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 234
Target Start/End: Complemental strand, 2419899 - 2419865
Alignment:
Q  200 attacactgaattatgtaattttctcaaattatta 234  Q
    ||||||||||||| |||||||||||||||||||||    
T  2419899 attacactgaattgtgtaattttctcaaattatta 2419865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 260
Target Start/End: Original strand, 3751945 - 3752006
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    |||||| ||| | |||||| |||||||||||||||||| | ||||||| ||||||||||||||    
T  3751945 taattatacttagttatgtgattttctcaaattattagtg-tgtcgacttgttagtgttcgtg 3752006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 250
Target Start/End: Original strand, 11596472 - 11596522
Alignment:
Q  200 attacactgaattatgtaattttctcaaattattagcgatgtcgacgtgtt 250  Q
    |||||| |||||||||| ||||||||||||||||| || | ||||||||||    
T  11596472 attacattgaattatgtcattttctcaaattattatcggtatcgacgtgtt 11596522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 242
Target Start/End: Original strand, 19746717 - 19746751
Alignment:
Q  208 gaattatgtaattttctcaaattattagcgatgtc 242  Q
    |||||||||||||||||||||||||||||| ||||    
T  19746717 gaattatgtaattttctcaaattattagcggtgtc 19746751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 260
Target Start/End: Complemental strand, 22013458 - 22013396
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    |||||||||| ||||||||||||||  ||||||||||||  ||||| ||||| ||||| ||||    
T  22013458 taattacactaaattatgtaatttttccaaattattagctgtgtcggcgtgtcagtgtccgtg 22013396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 236
Target Start/End: Original strand, 41091272 - 41091310
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagc 236  Q
    ||||||||||||||||||| |||||||||||| ||||||    
T  41091272 taattacactgaattatgtgattttctcaaatcattagc 41091310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 230
Target Start/End: Original strand, 41558655 - 41558701
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaatt 230  Q
    ||||||||||| | |||||||| |||||||||| |||||||||||||    
T  41558655 gacactgacacatttaattacattgaattatgtcattttctcaaatt 41558701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 249
Target Start/End: Original strand, 2039866 - 2039915
Alignment:
Q  200 attacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    |||||| ||||| |||| ||||||||||||||||| || |||||||||||    
T  2039866 attacattgaatcatgtcattttctcaaattattaccggtgtcgacgtgt 2039915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 255
Target Start/End: Original strand, 5467993 - 5468050
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    ||||||||||||||||||| ||||| ||||||||||| || | | ||||||| |||||    
T  5467993 taattacactgaattatgtgattttatcaaattattatcggtattgacgtgtcagtgt 5468050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 6035526 - 6035470
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    ||||||||||||||||| | |||| ||||||||||||||| ||||| ||||| |||||    
T  6035526 taattacactgaattatattattt-ctcaaattattagcggtgtcggcgtgtcagtgt 6035470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 12641732 - 12641667
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    ||||||||||| || ||||| ||| |||||||| ||||| | ||||||||| | ||||||||||||    
T  12641732 gacactgacacgtgcaattatactaaattatgtgatttttttaaattattaactatgtcgacgtgt 12641667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 15405062 - 15405107
Alignment:
Q  190 gacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    |||||||||||||||| |||||||| | ||||| ||||||||||||    
T  15405062 gacacttgtaattacattgaattatatgattttttcaaattattag 15405107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 18592117 - 18592072
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcg 243  Q
    |||||||| |||||||||||||||||| ||| |||||||| |||||    
T  18592117 taattacattgaattatgtaattttcttaaaatattagcggtgtcg 18592072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 231
Target Start/End: Original strand, 24273045 - 24273078
Alignment:
Q  198 taattacactgaattatgtaattttctcaaatta 231  Q
    ||||||||||||||||||| ||||||||||||||    
T  24273045 taattacactgaattatgtgattttctcaaatta 24273078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 24389169 - 24389136
Alignment:
Q  198 taattacactgaattatgtaattttctcaaatta 231  Q
    ||||||||||||||||||| ||||||||||||||    
T  24389169 taattacactgaattatgtgattttctcaaatta 24389136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 30098370 - 30098313
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    |||||||| |||||||||| ||||||||||||||||| || | ||| ||||| |||||    
T  30098370 taattacattgaattatgtgattttctcaaattattaacggtttcgtcgtgtcagtgt 30098313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 215
Target Start/End: Original strand, 30098977 - 30099070
Alignment:
Q  122 actatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatg 215  Q
    |||| ||||||||||||||| | |||| |||| |||||  || || |||| ||||||| || ||||| ||||| | ||||||||| ||||||||    
T  30098977 actacgaagcacgaacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtatccgacaccgacacatataattacacagaattatg 30099070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 235
Target Start/End: Complemental strand, 35017081 - 35017044
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattag 235  Q
    |||||||||| |||||||| ||||||||||||||||||    
T  35017081 taattacactaaattatgtgattttctcaaattattag 35017044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 38464367 - 38464416
Alignment:
Q  186 cactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    ||||||||||| ||||| || ||||| |||| ||||||||||||||||||    
T  38464367 cactgacacttataatttcaatgaataatgtgattttctcaaattattag 38464416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 224
Target Start/End: Complemental strand, 42029871 - 42029770
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||| ||||| |||||| |||||| |||| ||||   ||  | ||||||||||||||| ||||| || || | |||||||| |||||||||| |||||    
T  42029871 ctatgatgcacggacactcctcggataaggcgtgtctacgtgacagacatgtgtcgtgtccgacaccgatacatataattacattgaattatgtgatttt 42029772  T
Q  223 ct 224  Q
    ||    
T  42029771 ct 42029770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 8e-30; HSPs: 92)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 123 - 233
Target Start/End: Complemental strand, 20503584 - 20503474
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||||||| |||||| ||||||||||| ||||| ||| || |||||||||||||||  |||| ||||||||||||||||||||||||||| |||||    
T  20503584 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcagacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtcatttt 20503485  T
Q  223 ctcaaattatt 233  Q
     ||||||||||    
T  20503484 ttcaaattatt 20503474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 123 - 235
Target Start/End: Complemental strand, 55401194 - 55401082
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||||||| |||||| ||||||||||| ||||  ||| ||||||| |||||||||| ||||| |||||||||||||||||| |||||||| |||||    
T  55401194 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgatttt 55401095  T
Q  223 ctcaaattattag 235  Q
     ||||||||||||    
T  55401094 ttcaaattattag 55401082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 123 - 249
Target Start/End: Original strand, 40993275 - 40993402
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgt-aattt 221  Q
    |||||||||| | |||||| ||||||||||| ||||| ||| |||||||||||||||||| ||||| ||||| | ||||||||||||||||||| | |||    
T  40993275 ctatgaagcatggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgatttt 40993374  T
Q  222 tctcaaattattagcgatgtcgacgtgt 249  Q
    | | |||||||||||| |||||| ||||    
T  40993375 ttttaaattattagcggtgtcgaggtgt 40993402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 138 - 260
Target Start/End: Complemental strand, 10955056 - 10954934
Alignment:
Q  138 actcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcg 237  Q
    |||| ||||||||||| |||||  || ||||||| |||||||||| ||||| ||||||||| ||||||||||||||||| ||||| ||||||||||||      
T  10955056 actcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgacaccgacacttgtgattacactgaattatgtgattttttcaaattattagtt 10954957  T
Q  238 atgtcgacgtgttagtgttcgtg 260  Q
     ||||| ||||| ||||||||||    
T  10954956 gtgtcggcgtgtcagtgttcgtg 10954934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 125 - 234
Target Start/End: Complemental strand, 25775624 - 25775516
Alignment:
Q  125 atgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatt-ttc 223  Q
    ||||||||||||||||| ||||||||||| ||||||||| |||||||   | |||||| ||||| ||||||||||||||||||||||||||| ||| ||     
T  25775624 atgaagcacgaacactcctcggattaggcgtgtcctggtgtcggaca--cgacgtgtccgacaccgacacttgtaattacactgaattatgtgattattt 25775527  T
Q  224 tcaaattatta 234  Q
    |||||||||||    
T  25775526 tcaaattatta 25775516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 125 - 249
Target Start/End: Complemental strand, 28918120 - 28917994
Alignment:
Q  125 atgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtct--gacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||| | |||||| | ||||||||| |||||  || ||||||| ||||||||||   ||||| ||||||||||||||||||||||||||| |||||    
T  28918120 atgaagcagggacactccttggattaggcgtgtcccagtgtcggacacgtgtcgtgtccacgacaccgacacttgtaattacactgaattatgtgatttt 28918021  T
Q  223 ctcaaattattagcgatgtcgacgtgt 249  Q
     ||||||||||||| |||||| |||||    
T  28918020 ttcaaattattagctatgtcggcgtgt 28917994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 123 - 260
Target Start/End: Original strand, 26492145 - 26492282
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    ||||||||| || ||| || ||||||||| | |||| |||| || ||||||||||||||| ||||| || |||||||||||||||||||| | | |||||    
T  26492145 ctatgaagcgcggacattcctcggattagacgtgtcttggtgtcagacatgtgtcgtgtccgacaccgatacttgtaattacactgaattgtatgatttt 26492244  T
Q  223 ctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
     |||||||||||||  ||||| ||||| ||||| ||||    
T  26492245 ttcaaattattagctctgtcggcgtgtcagtgtccgtg 26492282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 125 - 260
Target Start/End: Original strand, 24204983 - 24205118
Alignment:
Q  125 atgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtc-gtgtctgacactgacacttgtaattacactgaattatgtaattttc 223  Q
    |||||||||| |||||| ||| ||||||| ||||||||| ||||||| | ||| ||||| ||||| ||||||| ||||||||||| ||||||| ||||||    
T  24204983 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcggacacgcgtcagtgtccgacac-gacacttataattacactgtattatgtcattttc 24205081  T
Q  224 tcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||||||||| |  ||||| ||||| ||||| ||||    
T  24205082 tcaaattattatccgtgtcggcgtgtcagtgtccgtg 24205118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 130 - 216
Target Start/End: Complemental strand, 3631796 - 3631710
Alignment:
Q  130 gcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgt 216  Q
    ||||| |||||| ||||| ||||| ||||||||| |||||||||||||||||| ||||||| ||| | |||||||||||||||||||    
T  3631796 gcacggacactcctcggactaggcgtgtcctggtgtcggacatgtgtcgtgtccgacactggcacatataattacactgaattatgt 3631710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 123 - 236
Target Start/End: Complemental strand, 27505370 - 27505252
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtc-----tgacactgacacttgtaattacactgaattatgta 217  Q
    |||||||||||| |||||| ||||||||||||||||| ||| ||||||| ||||||||||      ||||| |||||||||||||||||| ||||||||     
T  27505370 ctatgaagcacggacactcctcggattaggcatgtcccggtgtcggacacgtgtcgtgtcagacacgacaccgacacttgtaattacacttaattatgtg 27505271  T
Q  218 attttctcaaattattagc 236  Q
    |||||   |||||||||||    
T  27505270 atttttaaaaattattagc 27505252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 123 - 242
Target Start/End: Complemental strand, 11252095 - 11251978
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||||||  |||||| ||||||||||| ||| | | |  |||||| |||| ||||||||||| ||||| |  |||||||||||||||||| |||||    
T  11252095 ctatgaagcacagacactcctcggattaggcgtgttccgatgccggacacgtgttgtgtctgacaccgacacat--aattacactgaattatgtgatttt 11251998  T
Q  223 ctcaaattattagcgatgtc 242  Q
    |||||||||||||| |||||    
T  11251997 ctcaaattattagcaatgtc 11251978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 232
Target Start/End: Original strand, 8789489 - 8789599
Alignment:
Q  124 tatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtg--tcgtgtctgacactgacacttgtaattacactgaattatgtaattt 221  Q
    ||||||||||| |||||| ||||||||||| ||||  ||| || ||||||||  ||||||| ||||| ||||| | ||||||||| ||||||||| ||||    
T  8789489 tatgaagcacggacactcctcggattaggcgtgtctcggtgtccgacatgtgtgtcgtgtccgacaccgacacatataattacacggaattatgtgattt 8789588  T
Q  222 tctcaaattat 232  Q
    |||||||||||    
T  8789589 tctcaaattat 8789599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 4990974 - 4991027
Alignment:
Q  190 gacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcg 243  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  4990974 gacacttgtaattacactgaattatgtaattttctcaaactattagcggtgtcg 4991027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 255
Target Start/End: Original strand, 10268481 - 10268558
Alignment:
Q  178 gtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    |||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |  ||||| ||||| |||||    
T  10268481 gtgtctgacactgacacttgtaattacactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgt 10268558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 177 - 249
Target Start/End: Complemental strand, 8383322 - 8383250
Alignment:
Q  177 cgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    |||||| ||||| ||||||| ||||||||||||||||| | |||||||||||||||||||| ||||| |||||    
T  8383322 cgtgtccgacaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgt 8383250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 235
Target Start/End: Original strand, 8412889 - 8412997
Alignment:
Q  125 atgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttct 224  Q
    ||||||||| |||| || | |||||||||||||| |||| |||||||| ||||||| | ||||| |||||   |||||| ||||||||||||  ||||||    
T  8412889 atgaagcacaaacattccttggattaggcatgtcttggtgtcggacatttgtcgtggccgacacggacac--ataattaaactgaattatgtgtttttct 8412986  T
Q  225 caaattattag 235  Q
    |||||||||||    
T  8412987 caaattattag 8412997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 257
Target Start/End: Original strand, 4987299 - 4987365
Alignment:
Q  191 acacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttc 257  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||  ||||| ||||| |||||||    
T  4987299 acacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgttc 4987365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 255
Target Start/End: Complemental strand, 25093579 - 25093489
Alignment:
Q  165 tcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    |||||||||||| ||||| ||||| ||||| | ||||||||||||||| ||| |||||||||||| |||| |  ||||| |||||||||||    
T  25093579 tcggacatgtgttgtgtccgacaccgacacatataattacactgaattgtgtgattttctcaaatcattaacagtgtcggcgtgttagtgt 25093489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 12083959 - 12083910
Alignment:
Q  186 cactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  12083959 cactgacacttgtaattacactgaattatgtagttttctcaatttattag 12083910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 123 - 243
Target Start/End: Complemental strand, 8842448 - 8842329
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||||||| |||||| ||||||||||| ||||    ||||  |||||||||||||||||||| ||||  | |||||||||  |||||||| |||||    
T  8842448 ctatgaagcacggacactcctcggattaggcgtgtctcaatatctaacatgtgtcgtgtctgacaccgacatatataattacaccaaattatgtgatttt 8842349  T
Q  223 ctcaaattattagcgatgtcg 243  Q
    |  |||||||||||| |||||    
T  8842348 c-aaaattattagcggtgtcg 8842329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 9800098 - 9800022
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||| |||||||  |||||||| |||||||||||||||||||||||||||| | ||||| ||||| ||||| ||||    
T  9800098 gacaccgacacttacaattacacggaattatgtaattttctcaaattattagaggtgtcggcgtgtcagtgtacgtg 9800022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 237
Target Start/End: Original strand, 49505148 - 49505208
Alignment:
Q  177 cgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcg 237  Q
    |||||| ||||||||||| | |||||||||| |||||||| ||||||||||||||||||||    
T  49505148 cgtgtccgacactgacacatataattacactaaattatgtgattttctcaaattattagcg 49505208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 14209171 - 14209120
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    ||||||||||||||||||||||||||||||||| ||||| | ||||||||||    
T  14209171 gacactgacacttgtaattacactgaattatgtgattttttaaaattattag 14209120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 236
Target Start/End: Complemental strand, 45451630 - 45451559
Alignment:
Q  165 tcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    |||||||||||||||||| ||||| ||||| | | |||| |||||| ||||| |||||||||||||||||||    
T  45451630 tcggacatgtgtcgtgtccgacaccgacacatattattatactgaagtatgtgattttctcaaattattagc 45451559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 7928515 - 7928449
Alignment:
Q  177 cgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcg 243  Q
    |||||| ||||| ||||| | ||||||||||||||||||| ||||| |||||||||||||| |||||    
T  7928515 cgtgtccgacaccgacacatataattacactgaattatgtgattttttcaaattattagcggtgtcg 7928449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 235
Target Start/End: Original strand, 15999951 - 16000068
Alignment:
Q  124 tatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgt------ctgacactgacacttgtaattacactgaattatgta 217  Q
    ||||| ||||| |||||| | ||||||||| ||||| ||| ||||||| |||||||||      | ||||| |||||||||| ||||||||||||||||     
T  15999951 tatgatgcacggacactccttggattaggcgtgtcccggtgtcggacacgtgtcgtgtacgtgtccgacaccgacacttgtagttacactgaattatgtt 16000050  T
Q  218 attttctcaaattattag 235  Q
    ||||| | ||||||||||    
T  16000051 atttttttaaattattag 16000068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 26508162 - 26508116
Alignment:
Q  190 gacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||    
T  26508162 gacacttgtaattacactgaattatgtgattttttcaaattattagc 26508116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 236
Target Start/End: Original strand, 51206348 - 51206406
Alignment:
Q  178 gtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    ||||| ||||| |||||||||| |||||||||||||||| ||||| |||||||||||||    
T  51206348 gtgtccgacaccgacacttgtatttacactgaattatgtgattttttcaaattattagc 51206406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 237
Target Start/End: Original strand, 8039836 - 8039889
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcg 237  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||||||||||||||    
T  8039836 gacaccgacacatataattacactgaattatataattttctcaaattattagcg 8039889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 255
Target Start/End: Original strand, 34307787 - 34307852
Alignment:
Q  190 gacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    ||||||| ||||||||||||| ||||| |||||||||||||||||||| ||||  |||||| ||||    
T  34307787 gacacttataattacactgaaatatgtgattttctcaaattattagcggtgtcagcgtgttcgtgt 34307852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 1509597 - 1509545
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    ||||| |||||||||||||||||| |||||||| ||||| |||||||||||||    
T  1509597 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagc 1509545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 123 - 231
Target Start/End: Complemental strand, 7171620 - 7171513
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    ||||||||||   |||||| | ||||||||| ||||  ||| ||||||| |||||||||| |||||  |||||||||||||||| ||||||| | |||||    
T  7171620 ctatgaagcatatacactccttggattaggcgtgtcgcggtgtcggacacgtgtcgtgtccgacaccaacacttgtaattacaccgaattatatgatttt 7171521  T
Q  223 ctcaaatta 231  Q
     ||||||||    
T  7171520 -tcaaatta 7171513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 14832157 - 14832105
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    |||||||||||||||||||||| ||| |||||| ||||| |||||||||||||    
T  14832157 gacactgacacttgtaattacattgagttatgtgattttttcaaattattagc 14832105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 20691383 - 20691327
Alignment:
Q  178 gtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattatta 234  Q
    ||||||||||| ||||| | | ||||||||||||||||| |||||||||||||||||    
T  20691383 gtgtctgacaccgacacatatgattacactgaattatgtcattttctcaaattatta 20691327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 49651787 - 49651839
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    ||||| |||||||||||||||| |||||||||| ||||| |||||||||||||    
T  49651787 gacaccgacacttgtaattacagtgaattatgtgattttttcaaattattagc 49651839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 242
Target Start/End: Complemental strand, 3618949 - 3618881
Alignment:
Q  172 tgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtc 242  Q
    ||||| ||||||||||| ||||| |  |||||| |||||||||| ||||||||||||||||||||| ||||    
T  3618949 tgtgttgtgtctgacaccgacacat--aattacgctgaattatggaattttctcaaattattagcggtgtc 3618881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 249
Target Start/End: Original strand, 11493376 - 11493427
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    ||||||||||||||||||| ||||||||| |||||||| | |||||||||||    
T  11493376 taattacactgaattatgtgattttctcacattattagtggtgtcgacgtgt 11493427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 234
Target Start/End: Original strand, 17568691 - 17568734
Alignment:
Q  191 acacttgtaattacactgaattatgtaattttctcaaattatta 234  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
T  17568691 acacttgtaattacattaaattatgtaattttctcaaattatta 17568734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 21479176 - 21479105
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    ||||| |||||| |||||||||||||||| ||| ||||| |||||||||||||  ||||| ||||| |||||    
T  21479176 gacaccgacactagtaattacactgaattgtgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 21479105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 34910375 - 34910324
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    ||||| ||| ||||||||||||||||||||||| ||||| ||||||||||||    
T  34910375 gacaccgactcttgtaattacactgaattatgtgattttttcaaattattag 34910324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 35994733 - 35994790
Alignment:
Q  177 cgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    |||||| ||||| ||||||||||||||||||||||||||| ||||| |||||||||||||    
T  35994733 cgtgtccgacac-gacacttgtaattacactgaattatgtgatttt-tcaaattattagc 35994790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 190 - 236
Target Start/End: Original strand, 21256993 - 21257039
Alignment:
Q  190 gacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    |||||||||||||| |||||||||||| ||||| |||||||||||||    
T  21256993 gacacttgtaattatactgaattatgtgattttttcaaattattagc 21257039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 122 - 224
Target Start/End: Complemental strand, 35223058 - 35222956
Alignment:
Q  122 actatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattt 221  Q
    ||||||||||||| |||||| |||||| | || |||||  || || |||| ||||| |||| ||||| ||||| | |||||||| |||||||||| ||||    
T  35223058 actatgaagcacggacactcctcggataaagcgtgtccccgtgtcagacacgtgtcatgtccgacaccgacacatataattacattgaattatgtgattt 35222959  T
Q  222 tct 224  Q
    |||    
T  35222958 tct 35222956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 1438848 - 1438803
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcg 243  Q
    |||||| |||||||||||| ||||||||||||| ||||||||||||    
T  1438848 taattatactgaattatgtgattttctcaaattgttagcgatgtcg 1438803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 248
Target Start/End: Original strand, 3164033 - 3164090
Alignment:
Q  191 acacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtg 248  Q
    ||||||||  |||||||||||||||| ||||| |||||||||||||  ||||||||||    
T  3164033 acacttgttcttacactgaattatgtgattttttcaaattattagctgtgtcgacgtg 3164090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 3865749 - 3865700
Alignment:
Q  167 ggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgt 216  Q
    ||||| |||||||||| ||||| |||||||||||||| ||||||||||||    
T  3865749 ggacacgtgtcgtgtcagacaccgacacttgtaattatactgaattatgt 3865700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 260
Target Start/End: Original strand, 8587017 - 8587098
Alignment:
Q  179 tgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    |||| ||||| |||||||||||||||||| |||||||| ||||| |||||||| |||   ||||| ||||| ||||| ||||    
T  8587017 tgtccgacaccgacacttgtaattacacttaattatgtgattttttcaaattactagatgtgtcggcgtgtcagtgtccgtg 8587098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 16192765 - 16192810
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcg 243  Q
    ||||||||||||||||||| ||||||||||||||||| || |||||    
T  16192765 taattacactgaattatgttattttctcaaattattaacggtgtcg 16192810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 236
Target Start/End: Original strand, 25948895 - 25948940
Alignment:
Q  191 acacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    |||||| ||||||||||||||||||| ||||| |||||||||||||    
T  25948895 acacttataattacactgaattatgtgattttttcaaattattagc 25948940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 28812645 - 28812580
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacac 188  Q
    |||||| ||||  |||||| ||||||||||| ||||||| | |||||||||| |||||||||||||    
T  28812645 ctatgaggcacagacactcctcggattaggcgtgtcctgctgtcggacatgtatcgtgtctgacac 28812580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 34185124 - 34185189
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    ||||| ||||||||||||||||||||||| ||| ||||| | |||||||||||  ||||| |||||    
T  34185124 gacaccgacacttgtaattacactgaattgtgtgattttttgaaattattagccgtgtcggcgtgt 34185189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 10690277 - 10690321
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtc 242  Q
    ||||||||||||||||||| ||||||||| |||||||||| ||||    
T  10690277 taattacactgaattatgtgattttctcagattattagcggtgtc 10690321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 11313801 - 11313853
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    |||||| |||| | |||||||||| |||||||| |||||||||||||||||||    
T  11313801 gacactaacacatataattacactaaattatgtgattttctcaaattattagc 11313853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 237
Target Start/End: Complemental strand, 11610574 - 11610526
Alignment:
Q  189 tgacacttgtaattacactgaattatgtaattttctcaaattattagcg 237  Q
    |||||||||||| ||||||||||||||| ||||| | ||||||||||||    
T  11610574 tgacacttgtaactacactgaattatgtgatttttttaaattattagcg 11610526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 14216950 - 14216874
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||| ||||||||||||||||||||||||| | || || | ||||||||||   ||||||||||| ||||| ||||    
T  14216950 gacacggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgtg 14216874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 14223079 - 14223003
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||| ||||||||||||||||||||||||| | || || | ||||||||||   ||||||||||| ||||| ||||    
T  14223079 gacacggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgtg 14223003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 234
Target Start/End: Complemental strand, 21211332 - 21211296
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattatta 234  Q
    ||||||||||||| |||||||||||||||||||||||    
T  21211332 taattacactgaactatgtaattttctcaaattatta 21211296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 214
Target Start/End: Complemental strand, 23657859 - 23657767
Alignment:
Q  122 actatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattat 214  Q
    ||||||||| ||| |||||  ||||||||||  ||||| |||||||||||  |||| |||| ||||| || | || |||||||||||||||||    
T  23657859 actatgaagtacggacacttttcggattaggtgtgtcccggtatcggacaaatgtcatgtccgacaccgatatttataattacactgaattat 23657767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 255
Target Start/End: Original strand, 32400702 - 32400777
Alignment:
Q  177 cgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    |||||| ||||| ||||||||||||||||   ||||||||||| || |||||||||||||  ||||| ||||| |||||    
T  32400702 cgtgtccgacacggacacttgtaattaca---aattatgtaatcttttcaaattattagctgtgtcgccgtgtcagtgt 32400777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 243
Target Start/End: Original strand, 32804527 - 32804600
Alignment:
Q  166 cggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcg 243  Q
    ||||||||||||||||| ||    ||||| | |||||||||| |||||||| ||||||||||||||||| || |||||    
T  32804527 cggacatgtgtcgtgtccga----gacacatataattacactaaattatgtgattttctcaaattattaacggtgtcg 32804600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 171
Target Start/End: Complemental strand, 40052431 - 40052383
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggaca 171  Q
    ||||||||||||||||||| ||||||||||| ||||| ||| |||||||    
T  40052431 ctatgaagcacgaacactcctcggattaggcgtgtcccggtgtcggaca 40052383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 124 - 171
Target Start/End: Complemental strand, 1389956 - 1389909
Alignment:
Q  124 tatgaagcacgaacactcatcggattaggcatgtcctggtatcggaca 171  Q
    ||||||||||| |||||| | ||||||||||||||||||| |||||||    
T  1389956 tatgaagcacggacactccttggattaggcatgtcctggtgtcggaca 1389909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 249
Target Start/End: Original strand, 5407262 - 5407313
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    |||||||| |||||||||| ||||||||||||| |||||| ||||| |||||    
T  5407262 taattacaatgaattatgtgattttctcaaatttttagcggtgtcggcgtgt 5407313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 11666002 - 11665931
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    ||||| ||||| | |||||||||| |||| ||| ||||| |||||||||||||| |||||  ||||||||||    
T  11666002 gacaccgacacatataattacactaaattgtgtgattttatcaaattattagcgttgtcggtgtgttagtgt 11665931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 249
Target Start/End: Complemental strand, 12704051 - 12704000
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    |||||||||||||||||||  ||||||||||||||||| | ||||| |||||    
T  12704051 taattacactgaattatgtgcttttctcaaattattagtggtgtcggcgtgt 12704000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 14338473 - 14338528
Alignment:
Q  173 gtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaa 228  Q
    |||||||||||||||| |||| |||| |||||| |||||||||| ||||| |||||    
T  14338473 gtgtcgtgtctgacaccgacatttgtgattacattgaattatgtcattttttcaaa 14338528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 14829747 - 14829677
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    ||||| |||||||||||||||  |||||||||| ||||| |||||||||||||  ||||| ||||| |||||    
T  14829747 gacaccgacacttgtaattaccatgaattatgtgatttt-tcaaattattagctgtgtcggcgtgtcagtgt 14829677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 249
Target Start/End: Original strand, 23870574 - 23870625
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    |||| |||||||||||| | ||||| |||||||||||||| |||||||||||    
T  23870574 taatcacactgaattatatgattttttcaaattattagcggtgtcgacgtgt 23870625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 243
Target Start/End: Complemental strand, 52369817 - 52369774
Alignment:
Q  200 attacactgaattatgtaattttctcaaattattagcgatgtcg 243  Q
    |||||| |||||||||||||||||||||||||||| | ||||||    
T  52369817 attacattgaattatgtaattttctcaaattattatccatgtcg 52369774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 236
Target Start/End: Complemental strand, 9624685 - 9624647
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagc 236  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  9624685 taattacattgaattatgtgattttctcaaattattagc 9624647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 222
Target Start/End: Original strand, 15505775 - 15505829
Alignment:
Q  168 gacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    ||||||||| ||||| |||||  |||||| ||||||||||||||||| |||||||    
T  15505775 gacatgtgttgtgtccgacaccaacacttataattacactgaattatataatttt 15505829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 15796295 - 15796345
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattatta 234  Q
    ||||| |||| |||||||||||||||||||| | ||||| |||||||||||    
T  15796295 gacaccgacaattgtaattacactgaattatatgattttttcaaattatta 15796345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 17005621 - 17005671
Alignment:
Q  185 acactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    |||| ||||||| ||||||||||||||||| | ||||| ||||||||||||    
T  17005621 acaccgacacttataattacactgaattatatgattttatcaaattattag 17005671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 234
Target Start/End: Complemental strand, 21149109 - 21149075
Alignment:
Q  200 attacactgaattatgtaattttctcaaattatta 234  Q
    ||||||||||||||||| |||||||||||||||||    
T  21149109 attacactgaattatgtcattttctcaaattatta 21149075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 249
Target Start/End: Original strand, 22774070 - 22774136
Alignment:
Q  183 tgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    |||||| ||||||| ||||||||||||| ||||| | ||| || ||||||||| | |||||||||||    
T  22774070 tgacaccgacacttataattacactgaaatatgtgactttgtctaattattagtggtgtcgacgtgt 22774136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 236
Target Start/End: Original strand, 27277853 - 27277891
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagc 236  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  27277853 taattacactaaattatgtgattttctcaaattattagc 27277891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 251
Target Start/End: Complemental strand, 28576777 - 28576707
Alignment:
Q  181 tctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgtta 251  Q
    ||||| || ||||| |||||||||| | |||| ||| ||||||||||||||||| || |||| ||||||||    
T  28576777 tctgataccgacacatgtaattacattcaattttgtcattttctcaaattattaccggtgtccacgtgtta 28576707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 260
Target Start/End: Original strand, 32429395 - 32429457
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||| ||||||||||||| ||||||| |||||||||||| |||||  |||| | ||||||||    
T  32429395 taattgcactgaattatgtgattttcttaaattattagcgttgtcggagtgtcaatgttcgtg 32429457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 237
Target Start/End: Complemental strand, 1550198 - 1550145
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcg 237  Q
    ||||||||||| | ||||||||||||||  ||| ||||| ||||||||||||||    
T  1550198 gacactgacacctataattacactgaatagtgtgattttttcaaattattagcg 1550145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 4987222 - 4987279
Alignment:
Q  125 atgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtc 182  Q
    |||||| ||| |||||| ||||||||||| ||||| ||| ||||||| ||||||||||    
T  4987222 atgaagtacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtc 4987279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 199 - 236
Target Start/End: Complemental strand, 14979224 - 14979187
Alignment:
Q  199 aattacactgaattatgtaattttctcaaattattagc 236  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  14979224 aattacactgaattatgtgattttttcaaattattagc 14979187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 15544737 - 15544680
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    |||||| || ||||||||| ||||| |||||||||||||| |||| |||||| |||||    
T  15544737 taattatacagaattatgtgattttatcaaattattagcggtgtcaacgtgtcagtgt 15544680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 234
Target Start/End: Original strand, 16789668 - 16789701
Alignment:
Q  201 ttacactgaattatgtaattttctcaaattatta 234  Q
    |||||||||||||||| |||||||||||||||||    
T  16789668 ttacactgaattatgtcattttctcaaattatta 16789701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 21720807 - 21720746
Alignment:
Q  199 aattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    |||||||||||||||||  || |||||||||||||| || ||||| ||||| ||||| ||||    
T  21720807 aattacactgaattatgagatattctcaaattattatcggtgtcggcgtgtcagtgtccgtg 21720746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 249
Target Start/End: Complemental strand, 25074831 - 25074782
Alignment:
Q  200 attacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    |||||||| |||||||| ||||||||||||||||| || ||||| |||||    
T  25074831 attacactcaattatgtcattttctcaaattattatcggtgtcggcgtgt 25074782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 28812567 - 28812522
Alignment:
Q  190 gacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    ||||||||||| ||||||||||||||| ||||  ||||||||||||    
T  28812567 gacacttgtaactacactgaattatgtgatttcttcaaattattag 28812522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 255
Target Start/End: Original strand, 29112295 - 29112352
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    ||||||||||||||||| | |||||||||||| ||||| | |||| |||||| |||||    
T  29112295 taattacactgaattatatgattttctcaaataattagtggtgtcaacgtgtcagtgt 29112352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 34185051 - 34185100
Alignment:
Q  122 actatgaagcacgaacactcatcggattaggcatgtcctggtatcggaca 171  Q
    ||||||||||||| |||||| ||||||||||| ||||| ||| |||||||    
T  34185051 actatgaagcacggacactcctcggattaggcgtgtcccggtgtcggaca 34185100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 47362620 - 47362555
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    ||||||||||  | |||||||| | |||||||||||||||| |||||||||  ||||| |||||||    
T  47362620 gacactgacatgtataattacattcaattatgtaattttcttaaattattactgatgttgacgtgt 47362555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 14747620 - 14747548
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgt-aattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    ||||| ||| |||||||||||||| |||||||| | |||| |||||||||||||  ||||| ||||| |||||    
T  14747620 gacacggacccttgtaattacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgtcagtgt 14747548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 234
Target Start/End: Original strand, 14840306 - 14840342
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattatta 234  Q
    ||||||||||||||||||| ||||||| |||||||||    
T  14840306 taattacactgaattatgtgattttctgaaattatta 14840342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 218
Target Start/End: Complemental strand, 35312106 - 35312078
Alignment:
Q  190 gacacttgtaattacactgaattatgtaa 218  Q
    |||||||||||||||||||||||||||||    
T  35312106 gacacttgtaattacactgaattatgtaa 35312078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 124 - 261
Target Start/End: Original strand, 403 - 540
Alignment:
Q  124 tatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttc 223  Q
    ||||||||||| |||||| ||||||||||  ||||| ||| ||||||| | |||||||| ||||| ||||||||||||||||||||||| ||| |||||     
T  403 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacttgtaattacactgaattttgtgattttt 502  T
Q  224 tcaaattattagcgatgtcgacgtgttagtgttcgtgg 261  Q
    |||||||||||||  ||||| ||| | ||||| |||||    
T  503 tcaaattattagcagtgtcggcgtatcagtgtccgtgg 540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 7e-27; HSPs: 76)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 31557093 - 31557005
Alignment:
Q  145 ggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattatta 234  Q
    ||||||||| ||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||| ||||| |||||||||||    
T  31557093 ggattaggcgtgtcctggtgtcggacatgtgtcgtgtctgacaccgaaacttgtaattacactgaattatgtgatttt-tcaaattatta 31557005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 123 - 260
Target Start/End: Original strand, 36450694 - 36450831
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||||||  |||||| ||||||||||| ||||||||| ||||||| | |||||||| |||||  |||||||||||||||||||||| ||| |||||    
T  36450694 ctatgaagcacagacactcctcggattaggcgtgtcctggtgtcggacacgcgtcgtgtccgacacctacacttgtaattacactgaattctgtgatttt 36450793  T
Q  223 ctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
     ||||||||||||   ||||| ||||| ||||| ||||    
T  36450794 ttcaaattattagttgtgtcggcgtgtcagtgtccgtg 36450831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 123 - 249
Target Start/End: Complemental strand, 14134818 - 14134692
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    ||||||| |||| |||||| ||| ||||||| |||||||||  |||||| ||||||||| |||||| ||||  | ||||||||||||||||||| |||||    
T  14134818 ctatgaaacacggacactcctcgaattaggcgtgtcctggtgacggacacgtgtcgtgtttgacaccgacatatataattacactgaattatgtgatttt 14134719  T
Q  223 ctcaaattattagcgatgtcgacgtgt 249  Q
    |||||||||||||   |||||||||||    
T  14134718 ctcaaattattagtattgtcgacgtgt 14134692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 125 - 236
Target Start/End: Complemental strand, 3025668 - 3025557
Alignment:
Q  125 atgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttct 224  Q
    |||||||||| |||||| ||||||||| | ||||   || || |||| |||||||||| ||||||||||| | ||||||||||||||||||| |||||||    
T  3025668 atgaagcacggacactcctcggattagccgtgtcacagtgtcagacacgtgtcgtgtccgacactgacacctataattacactgaattatgtgattttct 3025569  T
Q  225 caaattattagc 236  Q
    ||||||||||||    
T  3025568 caaattattagc 3025557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 126 - 233
Target Start/End: Complemental strand, 40332307 - 40332200
Alignment:
Q  126 tgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctc 225  Q
    |||| |||| |||||| |||||||||||  |||| ||| | ||||| ||||||||||  |||| ||||||||||||||||||||||||||| ||||||||    
T  40332307 tgaaacacggacactcctcggattaggcgcgtcccggtgtgggacacgtgtcgtgtcccacaccgacacttgtaattacactgaattatgtgattttctc 40332208  T
Q  226 aaattatt 233  Q
    ||||||||    
T  40332207 aaattatt 40332200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 125 - 255
Target Start/End: Original strand, 20679337 - 20679467
Alignment:
Q  125 atgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttct 224  Q
    |||||||| | |||||| |||| | |||| ||||| ||| ||||||| |||| | ||||||||| ||||||| ||||||||||||| ||||| |||||||    
T  20679337 atgaagcatggacactcctcggttaaggcgtgtcccggtgtcggacacgtgttgcgtctgacaccgacacttataattacactgaactatgtgattttct 20679436  T
Q  225 caaattattagcgatgtcgacgtgttagtgt 255  Q
    ||||||||||| | ||||||| ||| |||||    
T  20679437 caaattattaggggtgtcgacatgtcagtgt 20679467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 123 - 236
Target Start/End: Complemental strand, 18407838 - 18407725
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||||||| |||||| ||  ||||||| |||||| || |||||||||||||||||| | ||  ||||||||||||||||||||||||||| |||||    
T  18407838 ctatgaagcacggacactcctccaattaggcgtgtcctagtgtcggacatgtgtcgtgtccggcagcgacacttgtaattacactgaattatgtgatttt 18407739  T
Q  223 ctcaaattattagc 236  Q
     |  ||||||||||    
T  18407738 tttgaattattagc 18407725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 161 - 260
Target Start/End: Complemental strand, 20873150 - 20873051
Alignment:
Q  161 ggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||||||||| || ||||||| ||||| |||||||||||||||||| |||||||| ||||| ||||||||||| | |||||| ||||| ||||| ||||    
T  20873150 ggtatcggacacgtatcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattatctatgtcggcgtgtcagtgtccgtg 20873051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 33405324 - 33405435
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    ||||| |||||| |||||||| ||||||| | ||||| ||| || ||||||||||||||| ||||| ||||| | |||||||||| ||||||||  ||||    
T  33405324 ctatggagcacggacactcattggattagccgtgtccaggtgtcagacatgtgtcgtgtccgacaccgacacatataattacactaaattatgtgttttt 33405423  T
Q  223 ctcaaattatta 234  Q
    ||||||||||||    
T  33405424 ctcaaattatta 33405435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 125 - 235
Target Start/End: Original strand, 926730 - 926840
Alignment:
Q  125 atgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttct 224  Q
    |||||||||| |||||| |||||| | |||||||| ||| ||||||| |||||| ||| ||||| ||||||| |||||||||||||  |||  |||||||    
T  926730 atgaagcacggacactcctcggataaagcatgtcccggtgtcggacacgtgtcgcgtccgacaccgacacttataattacactgaacaatgagattttct 926829  T
Q  225 caaattattag 235  Q
    |||||||||||    
T  926830 caaattattag 926840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 127 - 249
Target Start/End: Complemental strand, 5813707 - 5813585
Alignment:
Q  127 gaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctca 226  Q
    |||||||| |||||| ||  ||||||| ||||| ||| ||||||| |||||||||| ||||| |||||||||| ||||||| || ||||| | ||| |||    
T  5813707 gaagcacggacactcctccaattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtatttacactaaaatatgtgactttttca 5813608  T
Q  227 aattattagcgatgtcgacgtgt 249  Q
    ||||||||||  ||||| |||||    
T  5813607 aattattagctgtgtcggcgtgt 5813585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 123 - 243
Target Start/End: Complemental strand, 8343446 - 8343315
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacac-----------tgacacttgtaattacactgaat 211  Q
    |||||||||||  |||||| ||||||||||| ||||| ||| ||||||| |||||||||| |||||           ||||||||||||||||||| |||    
T  8343446 ctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcggacacgtgtacgacactgacacttgtaattacactaaat 8343347  T
Q  212 tatgtaattttctcaaattattagcgatgtcg 243  Q
    ||||| ||||| ||||||||||||| ||||||    
T  8343346 tatgtgattttttcaaattattagctatgtcg 8343315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 243
Target Start/End: Complemental strand, 8343086 - 8342971
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||||||  |||||| ||||||||||| ||||| ||| |||||||     | |||  ||||| |||||||||||||||||| |||||||| |||||    
T  8343086 ctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggaca-----catgtacgacaccgacacttgtaattacactaaattatgtgatttt 8342992  T
Q  223 ctcaaattattagcgatgtcg 243  Q
     ||||||||||||| ||||||    
T  8342991 ttcaaattattagctatgtcg 8342971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 4948718 - 4948659
Alignment:
Q  176 tcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    ||||||| ||||| ||||||||||||||||||||||||||| ||||| ||||||||||||    
T  4948718 tcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 4948659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 24669491 - 24669420
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||| || ||||  ||||| |||||    
T  24669491 gacaccgacacttgtaattacactgaattatgtaatttcctcaaattattaacggtgtcagcgtgtcagtgt 24669420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 198 - 249
Target Start/End: Complemental strand, 34897129 - 34897078
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  34897129 taattacactgaattatgtgattttctcaaattattagcggtgtcgacgtgt 34897078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 256
Target Start/End: Complemental strand, 22596070 - 22595980
Alignment:
Q  166 cggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgtt 256  Q
    |||||| |||||| ||| |||||  |||||||||||||||||||||||||| ||||| | |||||||||||  ||||| ||||| ||||||    
T  22596070 cggacacgtgtcgcgtccgacaccaacacttgtaattacactgaattatgttatttttttaaattattagctgtgtcggcgtgtcagtgtt 22595980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 27101597 - 27101508
Alignment:
Q  159 ctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    ||||| ||||||||||||| |||| ||||||||||| | ||||| |||| |||||||| ||||| |||||||||||||| ||||| |||||    
T  27101597 ctggtttcggacatgtgtcatgtccgacactgacacctataatt-cactaaattatgtgattttttcaaattattagcggtgtcggcgtgt 27101508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 255
Target Start/End: Original strand, 22197741 - 22197814
Alignment:
Q  182 ctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    |||||||||||||||||||||||||| |||||||| | ||| |||||||||||||  ||| | |||||||||||    
T  22197741 ctgacactgacacttgtaattacactaaattatgtgaatttttcaaattattagctgtgttggcgtgttagtgt 22197814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 123 - 228
Target Start/End: Original strand, 24413499 - 24413604
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||||||| |||||  ||||||||| | ||||| | | | ||||| |  ||||||| ||||||||||||| ||||||| |||||||||||| ||||    
T  24413499 ctatgaagcacggacacttctcggattagacgtgtcccgctgttggacacgcatcgtgtccgacactgacacttataattaccctgaattatgtattttt 24413598  T
Q  223 ctcaaa 228  Q
    ||||||    
T  24413599 ctcaaa 24413604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 168 - 249
Target Start/End: Complemental strand, 42874596 - 42874515
Alignment:
Q  168 gacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    ||||||||| |||||  |||||||||||||| |||||| |||||||||| ||||||||||| | ||| || |||||||||||    
T  42874596 gacatgtgttgtgtccaacactgacacttgtgattacattgaattatgtcattttctcaaaatgttaacggtgtcgacgtgt 42874515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 7442896 - 7442832
Alignment:
Q  191 acacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    |||||||||||||||||||||||||||||||| | |||||||||||| ||| | | |||||||||    
T  7442896 acacttgtaattacactgaattatgtaattttatgaaattattagcggtgttggcatgttagtgt 7442832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 25566899 - 25566847
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    ||||| ||||||||||||||||||||||||||| ||||| |||||||||||||    
T  25566899 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 25566847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 256
Target Start/End: Complemental strand, 13203685 - 13203627
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgtt 256  Q
    |||||||||||||||||||||||||||||||||||||| | ||| ||||| | ||||||    
T  13203685 taattacactgaattatgtaattttctcaaattattagtgttgttgacgtatcagtgtt 13203627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 249
Target Start/End: Original strand, 29447110 - 29447176
Alignment:
Q  183 tgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    |||||| |||||||||| ||||| |||||||||| ||||||||||||||||||   |||||||||||    
T  29447110 tgacaccgacacttgtagttacattgaattatgtgattttctcaaattattagttgtgtcgacgtgt 29447176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 260
Target Start/End: Complemental strand, 36934714 - 36934652
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    |||||||| |||||||||| ||||| || ||||||||||| ||||||||||||||||| ||||    
T  36934714 taattacaatgaattatgtgattttttcgaattattagcggtgtcgacgtgttagtgtccgtg 36934652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 237
Target Start/End: Original strand, 37283754 - 37283864
Alignment:
Q  122 actatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattt 221  Q
    |||||||||||||  ||||| ||||||||| | ||||| ||||   |||| ||||||||||  |||| ||||| |  |||||||||||||||||| ||||    
T  37283754 actatgaagcacgggcactcctcggattagacgtgtcccggta---gacacgtgtcgtgtcccacaccgacacat--aattacactgaattatgtgattt 37283848  T
Q  222 tctcaaattattagcg 237  Q
    ||||| ||||||||||    
T  37283849 tctcagattattagcg 37283864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 2572057 - 2572122
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    ||||| |||||||||||||||||| |||||||| ||||| ||||||||||||   |||||||||||    
T  2572057 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattaggtgtgtcgacgtgt 2572122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 243
Target Start/End: Complemental strand, 4611578 - 4611533
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcg 243  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||    
T  4611578 taattacactgaattatgttattttctcaaattattagcggtgtcg 4611533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 255
Target Start/End: Original strand, 4786277 - 4786410
Alignment:
Q  122 actatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattt 221  Q
    ||||||||||||| |||||| | | || || ||||||  | ||||| |||  |||||| || ||||| ||||| | ||||||||||||||||||| ||||    
T  4786277 actatgaagcacggacactctttgaataagccatgtctcgttatcgaacacatgtcgtatccgacaccgacacatataattacactgaattatgtgattt 4786376  T
Q  222 tctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    ||| |||||||||  | ||||| ||||| |||||    
T  4786377 tcttaaattattaatggtgtcggcgtgtcagtgt 4786410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 235
Target Start/End: Complemental strand, 7658507 - 7658470
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattag 235  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7658507 taattacactgaattatgtaattttctcaaattattag 7658470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 22204706 - 22204669
Alignment:
Q  177 cgtgtctgacactgacacttgtaattacactgaattat 214  Q
    ||||||||||||||||||||||||||||||||||||||    
T  22204706 cgtgtctgacactgacacttgtaattacactgaattat 22204669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 24362203 - 24362268
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    |||| |||||| | ||||||||||||||||||| ||| |||||||||||||||| ||||| |||||    
T  24362203 gacattgacacatataattacactgaattatgtgattctctcaaattattagcggtgtcggcgtgt 24362268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 253
Target Start/End: Original strand, 4298884 - 4298956
Alignment:
Q  181 tctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagt 253  Q
    |||||||| |||||||||||||||| | |||||||| ||||| ||||||||||| |  ||||| |||||||||    
T  4298884 tctgacaccgacacttgtaattacattaaattatgtgattttttcaaattattaactgtgtcggcgtgttagt 4298956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 22652034 - 22651958
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||| |||||||||||||| | |||||||||| ||||| |||||||||||||  ||||| ||||| ||||| ||||    
T  22652034 gacaccgacacttgtaattatattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 22651958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 27067301 - 27067350
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    ||||||||||||||||||||||  |||||||||||||||||||||| |||||    
T  27067301 gacactgacacttgtaattaca--gaattatgtaattttctcaaatcattag 27067350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 30077388 - 30077440
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    ||||| ||||||||||||||||||||||||||| || || |||||||||||||    
T  30077388 gacacggacacttgtaattacactgaattatgtgatgttttcaaattattagc 30077440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 249
Target Start/End: Original strand, 13844591 - 13844662
Alignment:
Q  178 gtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    ||||| ||||| ||||| | |||||||||| |||||||| |||||||||||||||||||  ||||| |||||    
T  13844591 gtgtccgacaccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtcggcgtgt 13844662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 24613585 - 24613527
Alignment:
Q  177 cgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    |||||| ||||| |||||||||||||||||| |||||||| ||||| |||||||||||||    
T  24613585 cgtgtccgacaccgacacttgtaattacacttaattatgtgatttt-tcaaattattagc 24613527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 260
Target Start/End: Original strand, 29510306 - 29510381
Alignment:
Q  185 acactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    |||| |||||||||||||| |||||||| ||| ||||| |||||||||||||  ||||| ||||| ||||| ||||    
T  29510306 acaccgacacttgtaattatactgaattttgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 29510381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 30271292 - 30271363
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    ||||||| ||||||||||||||||| ||||||| ||||| |||||| ||||||  ||||| ||||| |||||    
T  30271292 gacactggcacttgtaattacactgcattatgtgattttttcaaatgattagctgtgtcggcgtgtcagtgt 30271363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 249
Target Start/End: Original strand, 39954294 - 39954345
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    |||||||||| |||||||| |||||||||||||||||||| ||||| |||||    
T  39954294 taattacactaaattatgtgattttctcaaattattagcggtgtcggcgtgt 39954345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 205
Target Start/End: Original strand, 126295 - 126369
Alignment:
Q  131 cacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattaca 205  Q
    |||| |||||| ||||||||| | ||||| ||||| ||||| |||||||||| ||||||||||| | ||||||||    
T  126295 cacggacactcctcggattagccgtgtcccggtattggacacgtgtcgtgtccgacactgacacatataattaca 126369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 198 - 248
Target Start/End: Original strand, 14634156 - 14634206
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtcgacgtg 248  Q
    ||||||||||||||||| ||||||||| ||||| |||||| ||||||||||    
T  14634156 taattacactgaattatataattttcttaaattgttagcggtgtcgacgtg 14634206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 12606825 - 12606882
Alignment:
Q  179 tgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    |||||||||| ||||| | |||||||| |||||||| | |||||||||||||||||||    
T  12606825 tgtctgacaccgacacatataattacattgaattatatgattttctcaaattattagc 12606882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 31236570 - 31236643
Alignment:
Q  176 tcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    ||||||| | ||| ||||| | |||||||| |||||||||| |||||||||||||||||||  ||||| |||||    
T  31236570 tcgtgtccgtcaccgacacatataattacattgaattatgtgattttctcaaattattagcagtgtcggcgtgt 31236643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 255
Target Start/End: Complemental strand, 44067568 - 44067503
Alignment:
Q  190 gacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    ||||||| ||||||||||| ||||||| ||||||||||||||||| |  ||||| ||||| |||||    
T  44067568 gacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgt 44067503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 11944795 - 11944731
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgaca 187  Q
    ||||||||||||||||||||||||||||||| ||||  ||| ||||| |  |||||||| |||||    
T  11944795 ctatgaagcacgaacactcatcggattaggcgtgtctcggtgtcggatacatgtcgtgtatgaca 11944731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 234
Target Start/End: Original strand, 25886978 - 25887045
Alignment:
Q  167 ggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaa-ttttctcaaattatta 234  Q
    |||||||||||||||| ||||| ||||||| |||||||| | |||||||||| |||| |||||||||||    
T  25886978 ggacatgtgtcgtgtccgacac-gacacttataattacattaaattatgtaatttttttcaaattatta 25887045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 41831947 - 41831991
Alignment:
Q  190 gacacttgtaattacactgaattatgtaattttctcaaattatta 234  Q
    |||||||||| |||||||||||||||| ||||| |||||||||||    
T  41831947 gacacttgtagttacactgaattatgtgattttttcaaattatta 41831991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 41838131 - 41838195
Alignment:
Q  191 acacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    ||||||||| || ||||||||||||| ||||| | |||||||||||  ||||||||||| |||||    
T  41838131 acacttgtagttgcactgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgt 41838195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 4673426 - 4673497
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    |||||||| |||||||||||||||||||| | | ||||| ||||||||||| |  ||||| ||||| |||||    
T  4673426 gacactgatacttgtaattacactgaattttatgattttttcaaattattatctgtgtcggcgtgtcagtgt 4673497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 9414857 - 9414908
Alignment:
Q  165 tcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgt 216  Q
    ||||||| ||||||||||||||||  |||||| ||||| |||||||||||||    
T  9414857 tcggacacgtgtcgtgtctgacaccaacacttataattgcactgaattatgt 9414908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 13436965 - 13437036
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    ||||| ||||||||| |||||  |||||||||| ||||| |||||||||||||  ||||| ||||| |||||    
T  13436965 gacaccgacacttgttattaccatgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 13437036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 15816130 - 15816181
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    ||||| ||||||| |||||||||| |||||||| ||||| ||||||||||||    
T  15816130 gacaccgacacttataattacactaaattatgtgattttttcaaattattag 15816181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 203 - 242
Target Start/End: Original strand, 18067954 - 18067993
Alignment:
Q  203 acactgaattatgtaattttctcaaattattagcgatgtc 242  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  18067954 acactgaattatgtgattttctcaaattattagcggtgtc 18067993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 230
Target Start/End: Original strand, 18170478 - 18170529
Alignment:
Q  179 tgtctgacactgacacttgtaattacactgaattatgtaattttctcaaatt 230  Q
    |||| ||||| |||| ||||||||||| |||||||||||||||| |||||||    
T  18170478 tgtccgacaccgacatttgtaattacattgaattatgtaattttttcaaatt 18170529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 230
Target Start/End: Original strand, 18634046 - 18634097
Alignment:
Q  179 tgtctgacactgacacttgtaattacactgaattatgtaattttctcaaatt 230  Q
    |||| ||||| |||| ||||||||||| |||||||||||||||| |||||||    
T  18634046 tgtccgacaccgacatttgtaattacattgaattatgtaattttttcaaatt 18634097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 123 - 194
Target Start/End: Complemental strand, 29447574 - 29447503
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacac 194  Q
    |||||||||||| |||||| || |||||| | ||||| ||| |||||||  ||||||||||||||| |||||    
T  29447574 ctatgaagcacggacactcctccgattagacctgtcccggtgtcggacacatgtcgtgtctgacaccgacac 29447503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 11927087 - 11927137
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattatta 234  Q
    ||||| ||||| | ||||||||||||||||||| ||||| |||||||||||    
T  11927087 gacaccgacacatataattacactgaattatgtgattttatcaaattatta 11927137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 234
Target Start/End: Original strand, 14513191 - 14513225
Alignment:
Q  200 attacactgaattatgtaattttctcaaattatta 234  Q
    ||||| |||||||||||||||||||||||||||||    
T  14513191 attacgctgaattatgtaattttctcaaattatta 14513225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 236
Target Start/End: Complemental strand, 14731756 - 14731718
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagc 236  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  14731756 taattacactaaattatgtgattttctcaaattattagc 14731718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 214
Target Start/End: Original strand, 15023238 - 15023288
Alignment:
Q  164 atcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattat 214  Q
    |||||||| ||||||| || ||||  |||||||||||||||||||||||||    
T  15023238 atcggacacgtgtcgtatccgacatcgacacttgtaattacactgaattat 15023288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 255
Target Start/End: Original strand, 34259821 - 34259867
Alignment:
Q  209 aattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    |||||| | ||||||||||||||||| ||||||| ||||||||||||    
T  34259821 aattatttcattttctcaaattattaccgatgtctacgtgttagtgt 34259867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 254
Target Start/End: Complemental strand, 1979477 - 1979400
Alignment:
Q  178 gtgtctgacactgacact-tgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtg 254  Q
    |||||||||| ||||||| ||| |||||| | |||||  ||||||||||||||||||| || ||| ||| ||||||||    
T  1979477 gtgtctgacattgacactatgtgattacatttaattaattaattttctcaaattattaccggtgttgacttgttagtg 1979400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 8293931 - 8293854
Alignment:
Q  136 acactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaatta 213  Q
    |||||| ||||||||||  ||||| ||| || || ||||||| ||| |||||| ||||| | ||||||||||||||||    
T  8293931 acactcctcggattaggtgtgtccaggtgtcagatatgtgtcatgtttgacaccgacacatataattacactgaatta 8293854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 12570438 - 12570503
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacac 188  Q
    |||| ||||||| ||| || || |||||||| ||||||||| ||||||| |||| |||||||||||    
T  12570438 ctataaagcacggacaatcttcagattaggcgtgtcctggtgtcggacacgtgtagtgtctgacac 12570503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 12570664 - 12570729
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacac 188  Q
    |||| ||||||| ||| || || |||||||| ||||||||| ||||||| |||| |||||||||||    
T  12570664 ctataaagcacggacaatcttcagattaggcgtgtcctggtgtcggacacgtgtagtgtctgacac 12570729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 255
Target Start/End: Original strand, 25192354 - 25192419
Alignment:
Q  190 gacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    ||||||| |||||| |||||||||||| | ||| |||||||||||||  ||||| ||||| |||||    
T  25192354 gacacttataattatactgaattatgtcactttttcaaattattagctgtgtcggcgtgtcagtgt 25192419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 28642457 - 28642416
Alignment:
Q  193 acttgtaattacactgaattatgtaattttctcaaattatta 234  Q
    ||||||| |||||||||||||||||| ||| |||||||||||    
T  28642457 acttgtagttacactgaattatgtaaatttttcaaattatta 28642416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 260
Target Start/End: Original strand, 31109514 - 31109595
Alignment:
Q  179 tgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    |||| ||||||||||| | || ||| |||||||| | | ||||||||||||||||| || ||||| ||||| ||||| ||||    
T  31109514 tgtccgacactgacacatatagttagactgaattgtttgattttctcaaattattaacggtgtcggcgtgtcagtgtccgtg 31109595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 234
Target Start/End: Complemental strand, 11803303 - 11803267
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattatta 234  Q
    ||||||||||||||||||| ||||||| |||||||||    
T  11803303 taattacactgaattatgtgattttcttaaattatta 11803267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 12559123 - 12559159
Alignment:
Q  200 attacactgaattatgtaattttctcaaattattagc 236  Q
    ||||||||||||||| | |||||||||||||||||||    
T  12559123 attacactgaattatatcattttctcaaattattagc 12559159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 26434237 - 26434181
Alignment:
Q  185 acactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgt 241  Q
    |||| ||||||| |||||| | |||||||||| ||||||||||| |||||| |||||    
T  26434237 acaccgacacttttaattatattgaattatgtgattttctcaaactattagtgatgt 26434181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 234
Target Start/End: Original strand, 34201061 - 34201097
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattatta 234  Q
    |||||||| |||||||||| |||||||||||||||||    
T  34201061 taattacattgaattatgtcattttctcaaattatta 34201097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 234
Target Start/End: Complemental strand, 39820547 - 39820437
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcg-tgtctgacactgacacttgtaattacactgaattatgtaattt 221  Q
    |||||||||||| |||||  ||||||||||| ||||| | | ||||||| | |||| |||| ||||| ||||| | | |||||||| |||||| | ||||    
T  39820547 ctatgaagcacggacacttctcggattaggcgtgtcccg-tgtcggacacgcgtcggtgtccgacac-gacacctatgattacactaaattatatcattt 39820450  T
Q  222 tctcaaattatta 234  Q
    |||||||||||||    
T  39820449 tctcaaattatta 39820437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 124 - 255
Target Start/End: Complemental strand, 92940 - 92794
Alignment:
Q  124 tatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgac---------------actgacacttgtaattacactg 208  Q
    ||||||||||| |||||| ||||||||||| ||||| ||| || ||||||||||||||| |||               ||||||||||||||||||||||    
T  92940 tatgaagcacggacactcctcggattaggcgtgtccaggtgtccgacatgtgtcgtgtccgacacccaccaacacaaaactgacacttgtaattacactg 92841  T
Q  209 aattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    ||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  92840 aattatgtaattttctcaaattattagcggtgtcggcgtgtcagtgt 92794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 216
Target Start/End: Complemental strand, 123686 - 123654
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgt 216  Q
    ||||| |||||||||||||||||||||||||||    
T  123686 gacaccgacacttgtaattacactgaattatgt 123654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 123 - 260
Target Start/End: Complemental strand, 8917 - 8780
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||||||| | |||| || |||||||| ||||  ||| ||||||| |||||||||| ||||| |||||||||||||||||| ||| || | |||||    
T  8917 ctatgaagcacggagactcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaataatatgatttt 8818  T
Q  223 ctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
     |||||||||||||  ||||| ||||| ||||| ||||    
T  8817 ttcaaattattagctgtgtcggcgtgtcagtgtccgtg 8780  T

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Target: scaffold0083 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 123 - 222
Target Start/End: Original strand, 45470 - 45569
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||||||| ||| || | ||||||||||||||  ||| || |||| |||||||||| ||||| |||||||||||||||||||||||||||| ||||    
T  45470 ctatgaagcacgtacaatctttggattaggcatgtcgcggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtattttt 45569  T

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Target: scaffold0049 (Bit Score: 52; Significance: 7e-21; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 178 - 237
Target Start/End: Complemental strand, 63837 - 63778
Alignment:
Q  178 gtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcg 237  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  63837 gtgtctgacaccgacacttgtaattgcactgaattatgtaattttctcaaattattagcg 63778  T

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Target: scaffold0049; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 232
Target Start/End: Complemental strand, 56980 - 56932
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattat 232  Q
    ||||||||||||| | ||||||||||||||| | |||||||||||||||    
T  56980 gacactgacacttatgattacactgaattatatcattttctcaaattat 56932  T

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Target: scaffold0361 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 123 - 235
Target Start/End: Complemental strand, 14646 - 14537
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||||||||||| |||||| |  |||||||| ||||  ||| ||||||| |||||||||| |||||   ||||||||||||||||||||||||| |||||    
T  14646 ctatgaagcacgtacactccttcgattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacac---cacttgtaattacactgaattatgtgatttt 14550  T
Q  223 ctcaaattattag 235  Q
     ||||||||||||    
T  14549 ttcaaattattag 14537  T

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Target: scaffold0022 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 121 - 234
Target Start/End: Complemental strand, 90964 - 90851
Alignment:
Q  121 gactatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatt 220  Q
    |||||||||||||  |||||||| ||||||||| |||  |||| ||||||| |||| ||||||||||  ||||  | ||||||||||||||||| | |||    
T  90964 gactatgaagcacatacactcattggattaggcgtgttttggtgtcggacacgtgttgtgtctgacatcgacatatataattacactgaattatatgatt 90865  T
Q  221 ttctcaaattatta 234  Q
    ||||||||||||||    
T  90864 ttctcaaattatta 90851  T

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Target: scaffold0793 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 123 - 222
Target Start/End: Original strand, 4821 - 4922
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgt--ctgacactgacacttgtaattacactgaattatgtaatt 220  Q
    |||||||||||| |||||| ||||||||||| |||||  || |||||||||||||||||    |||||  |||||||||||||||||||||||||| |||    
T  4821 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatgtgatt 4920  T
Q  221 tt 222  Q
    ||    
T  4921 tt 4922  T

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Target: scaffold0223 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 20230 - 20165
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||  ||||| |||||    
T  20230 gacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgt 20165  T

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Target: scaffold0018 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 255
Target Start/End: Original strand, 192256 - 192321
Alignment:
Q  190 gacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| || ||||| ||||| |||||    
T  192256 gacacttgtaattacaccgaattatgtaattttctcaaattattaacggtgtcggcgtgtcagtgt 192321  T

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Target: scaffold0018; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 260
Target Start/End: Original strand, 178818 - 178896
Alignment:
Q  183 tgacactgacacttgtaattacactgaattatg-taattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||||||||||||||||||||||||||||||| | ||||| ||||||||||||   ||||| ||||| ||||| ||||    
T  178818 tgacactgacacttgtaattacactgaattatgatgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtg 178896  T

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Target: scaffold0122 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 235
Target Start/End: Complemental strand, 8128 - 8017
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaatttt 222  Q
    |||| |||||||||||| | ||||||||||  ||| ||| ||||| |||| ||||||||| ||||| ||||||| ||||||||||| ||||| | |||||    
T  8128 ctattaagcacgaacacccttcggattaggtgtgttctgatatcgaacatatgtcgtgtccgacaccgacactt-taattacactgtattatatgatttt 8030  T
Q  223 ctcaaattattag 235  Q
     ||||||||||||    
T  8029 ttcaaattattag 8017  T

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Target: scaffold0008 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 125 - 236
Target Start/End: Original strand, 263303 - 263425
Alignment:
Q  125 atgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgaca-----------ctgacacttgtaattacactgaatta 213  Q
    ||||| |||| |||||| ||||||||||| |||| |||||||| ||| |||||||||||||||           ||||||||| ||||||||||||||||    
T  263303 atgaaccacggacactcctcggattaggcgtgtcttggtatcgaacacgtgtcgtgtctgacaccgacacgacactgacacttataattacactgaatta 263402  T
Q  214 tgtaattttctcaaattattagc 236  Q
    |||  ||||||||||||||||||    
T  263403 tgtggttttctcaaattattagc 263425  T

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Target: scaffold0103 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 260
Target Start/End: Complemental strand, 51890 - 51793
Alignment:
Q  166 cggacatgtgtcgtgtctgacactgaca---cttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    |||||| || ||||||||||||| ||||   ||||||||||||||||||||||| ||||| |||||||||||||  ||||| ||||| ||||| ||||    
T  51890 cggacacgtatcgtgtctgacaccgacaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 51793  T

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Target: scaffold0697 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 1731 - 1637
Alignment:
Q  155 tgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    |||||| || |||||||||||||||||| ||||| ||||||| |||||| ||  |||||| | ||||||||||||||||| || ||||| |||||    
T  1731 tgtcctagtgtcggacatgtgtcgtgtccgacaccgacacttataattataccaaattatatgattttctcaaattattaacggtgtcggcgtgt 1637  T

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Target: scaffold0722 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 247
Target Start/End: Original strand, 6992 - 7096
Alignment:
Q  143 tcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtc 242  Q
    ||||||||||| | ||| | |||| || | |||| ||||| |||||  ||||||||||||| ||| |||||||||||||| |||||||||||||  ||||    
T  6992 tcggattaggcgtatcccgatatcagatacgtgttgtgtccgacacctacacttgtaattatactaaattatgtaattttttcaaattattagctgtgtc 7091  T
Q  243 gacgt 247  Q
    |||||    
T  7092 gacgt 7096  T

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Target: scaffold1528 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 243
Target Start/End: Complemental strand, 1092 - 1034
Alignment:
Q  185 acactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcg 243  Q
    |||||||||| | || |||||||||||||||||||||| |||||||||||||| |||||    
T  1092 acactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgtcg 1034  T

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Target: scaffold0512 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 4976 - 5058
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattaca 205  Q
    |||||||||||  |||||| ||||||||||||||||    | ||||||| |||||||||| ||||| ||||||||||||||||    
T  4976 ctatgaagcacagacactcctcggattaggcatgtctcaatgtcggacacgtgtcgtgtccgacaccgacacttgtaattaca 5058  T

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Target: scaffold0306 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 260
Target Start/End: Complemental strand, 13523 - 13382
Alignment:
Q  125 atgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacac------ttgtaattacactgaattatgtaa 218  Q
    |||||||||| |||||| | ||||||||  |||||| || || |||  |||||||||| ||||| |||||      |||||||| ||||||||||||| |    
T  13523 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacaccgacccttgtaattgcactgaattatgtga 13424  T
Q  219 ttttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    |||||||||||||||||   ||||| ||||| ||||| ||||    
T  13423 ttttctcaaattattagttgtgtcggcgtgtcagtgtccgtg 13382  T

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Target: scaffold0152 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 260
Target Start/End: Original strand, 21804 - 21945
Alignment:
Q  125 atgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacac------ttgtaattacactgaattatgtaa 218  Q
    |||||||||| |||||| | ||||||||  |||||| || || |||  |||||||||| ||||| |||||      |||||||| ||||||||||||| |    
T  21804 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacaccgacccttgtaattgcactgaattatgtga 21903  T
Q  219 ttttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    |||||||||||||||||   ||||| ||||| ||||| ||||    
T  21904 ttttctcaaattattagttgtgtcggcgtgtcagtgtccgtg 21945  T

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Target: scaffold0136 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 3850 - 3900
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattatta 234  Q
    ||||||||||||||||||||||||||||||||| ||||| | |||||||||    
T  3850 gacactgacacttgtaattacactgaattatgtgatttttttaaattatta 3900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 212
Target Start/End: Complemental strand, 3427 - 3338
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacactgacacttgtaattacactgaatt 212  Q
    |||||||||||| |||||| ||||||||||| |||||  || ||   || ||||| |||| |||||||||||||||||||||||| ||||    
T  3427 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtccaccacgtgtcttgtccgacactgacacttgtaattacacttaatt 3338  T

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Target: scaffold0110 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 260
Target Start/End: Complemental strand, 28907 - 28832
Alignment:
Q  185 acactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    |||| ||||| | |||||||| |||||||||  ||||||| ||||||||| || ||||| ||||||||||||||||    
T  28907 acaccgacacatataattacattgaattatgcgattttcttaaattattaacggtgtcggcgtgttagtgttcgtg 28832  T

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Target: scaffold0044 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 53232 - 53189
Alignment:
Q  190 gacacttgtaattacactgaattatgtaattttctcaaattatt 233  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||    
T  53232 gacacttataattacactgaattatgtgattttctcaaattatt 53189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 17750 - 17801
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    ||||| |||||||||||||||||| |||||||| ||||| ||||||||||||    
T  17750 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 17801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 33375 - 33429
Alignment:
Q  195 ttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    |||||||||||||||||||||| ||||| |||||||||||||  ||||| |||||    
T  33375 ttgtaattacactgaattatgttattttttcaaattattagctgtgtcggcgtgt 33429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 46740 - 46690
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattatta 234  Q
    ||||| |||| |||||||||||||||||||||| ||||| |||||||||||    
T  46740 gacaccgacatttgtaattacactgaattatgtgattttttcaaattatta 46690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 241724 - 241659
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcctggtatcggacatgtgtcgtgtctgacac 188  Q
    |||||||||||| |||||  ||||||||||| ||||| ||| ||||||| |||||||||| |||||    
T  241724 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacac 241659  T

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Target: scaffold0246 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 19626 - 19583
Alignment:
Q  191 acacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||    
T  19626 acacttgtaattacactgaattatgtgatttt-tcaaattattag 19583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 44540 - 44584
Alignment:
Q  198 taattacactgaattatgtaattttctcaaattattagcgatgtc 242  Q
    ||||||||||||||||||| ||||||||||||| |||||| ||||    
T  44540 taattacactgaattatgtgattttctcaaatttttagcggtgtc 44584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 130534 - 130490
Alignment:
Q  190 gacacttgtaattacactgaattatgtaattttctcaaattatta 234  Q
    ||||||||||||||||||||||||||| ||||| ||||| |||||    
T  130534 gacacttgtaattacactgaattatgtgattttttcaaactatta 130490  T

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Target: scaffold0020 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 135313 - 135365
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    ||||| ||||| | ||||||||| ||||||||| |||||||||||||||||||    
T  135313 gacaccgacacatataattacacagaattatgtgattttctcaaattattagc 135365  T

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Target: scaffold0020; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 135262 - 135311
Alignment:
Q  122 actatgaagcacgaacactcatcggattaggcatgtcctggtatcggaca 171  Q
    |||||||||||||||||| | || |||||||| ||||||||| |||||||    
T  135262 actatgaagcacgaacacgcctcagattaggcgtgtcctggtgtcggaca 135311  T

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Target: scaffold0036 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 9748 - 9799
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattag 235  Q
    ||||| ||||| | |||||||||||||||| || ||||||||||||||||||    
T  9748 gacaccgacacatataattacactgaattaagtgattttctcaaattattag 9799  T

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Target: scaffold0025 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 23828 - 23777
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgt-aattttctcaaattatta 234  Q
    ||||| ||||||||||||||||||||||||||| | |||| |||||||||||    
T  23828 gacaccgacacttgtaattacactgaattatgtgatttttttcaaattatta 23777  T

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Target: scaffold0171 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 23569 - 23531
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaatttt 222  Q
    ||||||||||||| ||||||||||||||||||| |||||    
T  23569 gacactgacacttataattacactgaattatgtgatttt 23531  T

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Target: scaffold0085 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 249
Target Start/End: Complemental strand, 26428 - 26386
Alignment:
Q  207 tgaattatgtaattttctcaaattattagcgatgtcgacgtgt 249  Q
    |||||||||| |||||||||||||||||| | |||||||||||    
T  26428 tgaattatgtgattttctcaaattattagtggtgtcgacgtgt 26386  T

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Target: scaffold0019 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 71783 - 71710
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaa--ttttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    |||||||||||| |||||||||||||||| ||| |  |||| |||||||||||||  ||||| ||||| |||||    
T  71783 gacactgacactagtaattacactgaattgtgtgattttttttcaaattattagctgtgtcggcgtgtcagtgt 71710  T

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Target: scaffold0007 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 260
Target Start/End: Original strand, 225275 - 225345
Alignment:
Q  190 gacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||||| |||||||| || ||||||| ||||||||||||||||| |  ||||| ||||| ||||| ||||    
T  225275 gacacttataattacattgtattatgtcattttctcaaattattatctgtgtcggcgtgtcagtgtccgtg 225345  T

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Target: scaffold0598 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 234
Target Start/End: Original strand, 8071 - 8104
Alignment:
Q  201 ttacactgaattatgtaattttctcaaattatta 234  Q
    |||||||||||||||| |||||||||||||||||    
T  8071 ttacactgaattatgtcattttctcaaattatta 8104  T

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Target: scaffold0376 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 6370 - 6318
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagc 236  Q
    ||||| ||||| | |||||||| ||||||||| |||||| |||||||||||||    
T  6370 gacaccgacacatataattacattgaattatgcaattttgtcaaattattagc 6318  T

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Target: scaffold0126 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 260
Target Start/End: Complemental strand, 19202 - 19127
Alignment:
Q  184 gacactgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgttcgtg 260  Q
    ||||| |||| || |||| |||||||||||||| ||||| | ||||||||| | |||||| ||||||||||| ||||    
T  19202 gacaccgacatttttaatcacactgaattatgtcatttttt-aaattattaaccatgtcggcgtgttagtgtccgtg 19127  T

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Target: scaffold0057 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 159
Target Start/End: Complemental strand, 24155 - 24119
Alignment:
Q  123 ctatgaagcacgaacactcatcggattaggcatgtcc 159  Q
    |||||||||||| |||||||||||||||||| |||||    
T  24155 ctatgaagcacggacactcatcggattaggcgtgtcc 24119  T

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Target: scaffold0024 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 18116 - 18180
Alignment:
Q  191 acacttgtaattacactgaattatgtaattttctcaaattattagcgatgtcgacgtgttagtgt 255  Q
    |||||||  |||||| |||||||||| ||||||||||| | ||| || ||||||||||| |||||    
T  18116 acacttgcgattacattgaattatgttattttctcaaaattttatcggtgtcgacgtgtcagtgt 18180  T

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