View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11745_low_29 (Length: 544)

Name: NF11745_low_29
Description: NF11745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11745_low_29
NF11745_low_29
[»] chr8 (39 HSPs)
chr8 (364-523)||(21406199-21406358)
chr8 (364-523)||(21800691-21800850)
chr8 (366-521)||(38134296-38134454)
chr8 (366-523)||(21835161-21835318)
chr8 (366-523)||(38135593-38135747)
chr8 (463-523)||(44727487-44727547)
chr8 (430-505)||(38330514-38330589)
chr8 (369-505)||(28646247-28646383)
chr8 (369-505)||(28650831-28650967)
chr8 (426-505)||(22577659-22577738)
chr8 (463-505)||(25994477-25994519)
chr8 (463-505)||(36345034-36345076)
chr8 (427-505)||(41855363-41855441)
chr8 (463-505)||(43520776-43520818)
chr8 (432-505)||(18438634-18438707)
chr8 (432-505)||(42602460-42602533)
chr8 (463-503)||(3695398-3695438)
chr8 (463-498)||(31745213-31745248)
chr8 (463-505)||(914748-914790)
chr8 (463-505)||(2335148-2335190)
chr8 (463-505)||(7121786-7121828)
chr8 (435-505)||(7168091-7168161)
chr8 (435-505)||(18205789-18205859)
chr8 (463-505)||(32383205-32383247)
chr8 (463-505)||(32437160-32437202)
chr8 (463-505)||(40745284-40745326)
chr8 (463-505)||(43262452-43262494)
chr8 (463-508)||(34366942-34366987)
chr8 (463-508)||(44052223-44052268)
chr8 (463-500)||(45133278-45133315)
chr8 (424-508)||(2146954-2147037)
chr8 (465-505)||(22014279-22014319)
chr8 (463-503)||(31745991-31746031)
chr8 (461-505)||(34892809-34892853)
chr8 (461-505)||(36314318-36314362)
chr8 (424-500)||(38872935-38873011)
chr8 (461-505)||(40039684-40039728)
chr8 (461-505)||(40077250-40077294)
chr8 (425-505)||(42605234-42605314)
[»] chr1 (41 HSPs)
chr1 (366-521)||(3941134-3941289)
chr1 (380-523)||(46043454-46043597)
chr1 (369-523)||(45943708-45943862)
chr1 (368-484)||(46044747-46044864)
chr1 (396-505)||(1167526-1167635)
chr1 (367-521)||(3939889-3940043)
chr1 (396-520)||(26606763-26606886)
chr1 (381-523)||(48751392-48751534)
chr1 (432-500)||(41804038-41804106)
chr1 (463-523)||(46217300-46217360)
chr1 (464-523)||(29425318-29425377)
chr1 (9-93)||(4482979-4483060)
chr1 (385-523)||(51289942-51290080)
chr1 (463-523)||(46216429-46216489)
chr1 (432-505)||(46141782-46141855)
chr1 (398-505)||(15549826-15549933)
chr1 (457-505)||(49502822-49502870)
chr1 (433-500)||(11183187-11183254)
chr1 (463-523)||(29424411-29424473)
chr1 (425-505)||(18975120-18975200)
chr1 (426-505)||(13178132-13178211)
chr1 (425-500)||(23276113-23276188)
chr1 (465-503)||(23603552-23603590)
chr1 (432-486)||(46973204-46973258)
chr1 (463-505)||(50037270-50037312)
chr1 (432-497)||(6437547-6437612)
chr1 (404-505)||(6562161-6562262)
chr1 (465-502)||(17514728-17514765)
chr1 (432-505)||(27115823-27115896)
chr1 (461-498)||(46341677-46341714)
chr1 (456-505)||(49660847-49660896)
chr1 (432-505)||(52802130-52802203)
chr1 (434-509)||(13147497-13147573)
chr1 (425-505)||(13173829-13173908)
chr1 (465-505)||(18609895-18609935)
chr1 (465-505)||(20353935-20353975)
chr1 (425-505)||(23359349-23359429)
chr1 (461-505)||(26769192-26769236)
chr1 (425-505)||(29438020-29438100)
chr1 (425-505)||(44470011-44470091)
chr1 (461-505)||(49875339-49875383)
[»] chr4 (39 HSPs)
chr4 (380-523)||(9472806-9472949)
chr4 (369-523)||(9473643-9473797)
chr4 (366-523)||(17342075-17342233)
chr4 (365-518)||(17343389-17343541)
chr4 (396-523)||(19994276-19994398)
chr4 (431-505)||(34503708-34503782)
chr4 (408-474)||(19993018-19993084)
chr4 (433-509)||(29700298-29700374)
chr4 (463-505)||(36480540-36480582)
chr4 (432-505)||(955792-955865)
chr4 (364-505)||(11494476-11494616)
chr4 (396-505)||(15995686-15995795)
chr4 (396-505)||(19069151-19069260)
chr4 (432-505)||(21470903-21470976)
chr4 (463-509)||(4786330-4786376)
chr4 (461-503)||(21538491-21538533)
chr4 (463-505)||(40240373-40240415)
chr4 (425-510)||(9889987-9890072)
chr4 (396-505)||(15999799-15999908)
chr4 (457-518)||(20209315-20209375)
chr4 (425-505)||(37959720-37959800)
chr4 (463-523)||(48807369-48807428)
chr4 (463-505)||(1736091-1736133)
chr4 (463-505)||(12376016-12376058)
chr4 (463-505)||(23221670-23221712)
chr4 (463-505)||(38368259-38368301)
chr4 (463-505)||(40240710-40240752)
chr4 (463-505)||(40832674-40832716)
chr4 (463-505)||(43176628-43176670)
chr4 (463-505)||(55587386-55587428)
chr4 (425-474)||(4768671-4768720)
chr4 (463-500)||(6280888-6280925)
chr4 (466-503)||(21343379-21343416)
chr4 (463-508)||(39590565-39590610)
chr4 (433-505)||(958594-958665)
chr4 (461-505)||(9655909-9655953)
chr4 (457-489)||(32365957-32365989)
chr4 (463-507)||(41933620-41933664)
chr4 (468-520)||(42528904-42528956)
[»] scaffold1500 (1 HSPs)
scaffold1500 (380-523)||(741-884)
[»] chr2 (36 HSPs)
chr2 (380-523)||(42177196-42177339)
chr2 (366-442)||(42176015-42176091)
chr2 (396-505)||(14456466-14456575)
chr2 (396-479)||(40539120-40539203)
chr2 (396-500)||(30271038-30271142)
chr2 (434-505)||(24601641-24601712)
chr2 (434-505)||(24612402-24612473)
chr2 (434-505)||(34921759-34921830)
chr2 (9-93)||(25944953-25945034)
chr2 (425-505)||(45475433-45475513)
chr2 (396-450)||(958663-958717)
chr2 (461-507)||(25515806-25515852)
chr2 (463-505)||(26543989-26544031)
chr2 (432-505)||(23409501-23409574)
chr2 (456-505)||(29905482-29905531)
chr2 (425-505)||(35493341-35493421)
chr2 (463-523)||(43258715-43258775)
chr2 (436-503)||(41497476-41497543)
chr2 (432-486)||(2648798-2648852)
chr2 (463-505)||(7189951-7189993)
chr2 (396-442)||(19694202-19694248)
chr2 (404-498)||(27276381-27276475)
chr2 (463-505)||(29600791-29600833)
chr2 (435-505)||(35490683-35490753)
chr2 (463-521)||(38779601-38779659)
chr2 (427-505)||(41008928-41009005)
chr2 (463-505)||(41183224-41183266)
chr2 (463-505)||(43618604-43618646)
chr2 (467-508)||(28419442-28419483)
chr2 (463-520)||(33416906-33416963)
chr2 (466-502)||(3086069-3086105)
chr2 (396-452)||(3803596-3803652)
chr2 (461-505)||(4014293-4014337)
chr2 (425-505)||(25184830-25184909)
chr2 (425-505)||(34639314-34639394)
chr2 (465-505)||(44100798-44100838)
[»] chr7 (28 HSPs)
chr7 (380-523)||(42025067-42025210)
chr7 (396-521)||(40142645-40142770)
chr7 (405-523)||(40141387-40141505)
chr7 (380-450)||(45350855-45350925)
chr7 (366-425)||(7611792-7611851)
chr7 (425-505)||(30355239-30355319)
chr7 (425-505)||(46860504-46860584)
chr7 (425-500)||(9494811-9494886)
chr7 (407-474)||(40166791-40166857)
chr7 (425-500)||(48314666-48314741)
chr7 (463-505)||(45791336-45791378)
chr7 (432-505)||(36394938-36395011)
chr7 (381-505)||(47776281-47776405)
chr7 (471-521)||(7953718-7953768)
chr7 (433-499)||(34622500-34622566)
chr7 (366-484)||(39460487-39460605)
chr7 (463-505)||(48901442-48901484)
chr7 (456-505)||(19044317-19044366)
chr7 (456-505)||(20710270-20710319)
chr7 (463-500)||(38265476-38265513)
chr7 (461-510)||(42499438-42499487)
chr7 (461-505)||(7953760-7953804)
chr7 (433-505)||(10225843-10225915)
chr7 (465-505)||(17834520-17834560)
chr7 (461-505)||(17840890-17840934)
chr7 (465-505)||(30791008-30791048)
chr7 (433-505)||(37340303-37340375)
chr7 (425-505)||(47060920-47060999)
[»] chr6 (23 HSPs)
chr6 (364-523)||(35241845-35241999)
chr6 (463-523)||(32222560-32222620)
chr6 (463-523)||(9048106-9048166)
chr6 (366-523)||(9049067-9049222)
chr6 (463-523)||(32223495-32223555)
chr6 (396-502)||(17596905-17597011)
chr6 (424-505)||(23958882-23958963)
chr6 (425-505)||(13401479-13401559)
chr6 (463-503)||(14124720-14124760)
chr6 (425-505)||(31768746-31768826)
chr6 (445-500)||(13616253-13616308)
chr6 (463-502)||(15545758-15545797)
chr6 (462-505)||(19757302-19757345)
chr6 (463-505)||(2110455-2110497)
chr6 (463-505)||(29076323-29076365)
chr6 (463-505)||(29097828-29097870)
chr6 (463-505)||(29109856-29109898)
chr6 (463-505)||(29111296-29111338)
chr6 (463-505)||(31516890-31516932)
chr6 (463-500)||(11157741-11157778)
chr6 (456-505)||(32555588-32555637)
chr6 (457-505)||(17337673-17337721)
chr6 (465-505)||(26712223-26712263)
[»] chr5 (24 HSPs)
chr5 (381-523)||(17966868-17967010)
chr5 (407-505)||(29430578-29430676)
chr5 (396-505)||(39742539-39742648)
chr5 (380-450)||(25983350-25983420)
chr5 (407-505)||(42098278-42098376)
chr5 (463-523)||(25983400-25983460)
chr5 (433-500)||(8702203-8702270)
chr5 (385-523)||(17965802-17965940)
chr5 (425-505)||(18538335-18538415)
chr5 (395-450)||(13707386-13707441)
chr5 (408-505)||(27532617-27532713)
chr5 (433-505)||(3603148-3603220)
chr5 (433-505)||(34682258-34682330)
chr5 (465-520)||(35281839-35281894)
chr5 (396-505)||(13707931-13708040)
chr5 (445-501)||(24050040-24050096)
chr5 (425-505)||(25889987-25890067)
chr5 (404-441)||(13588648-13588685)
chr5 (404-441)||(13589541-13589578)
chr5 (433-498)||(20192354-20192419)
chr5 (464-505)||(20509551-20509592)
chr5 (465-501)||(20421949-20421985)
chr5 (445-505)||(25497524-25497584)
chr5 (465-505)||(42912878-42912918)
[»] chr3 (31 HSPs)
chr3 (9-93)||(26959224-26959305)
chr3 (424-505)||(52570566-52570647)
chr3 (427-505)||(19440251-19440329)
chr3 (396-505)||(2743362-2743471)
chr3 (425-505)||(41579724-41579804)
chr3 (463-520)||(6144283-6144340)
chr3 (396-505)||(9429849-9429958)
chr3 (424-505)||(19341594-19341675)
chr3 (425-505)||(28611100-28611180)
chr3 (425-500)||(7247865-7247940)
chr3 (463-505)||(21343494-21343536)
chr3 (430-500)||(49194951-49195021)
chr3 (432-505)||(41802998-41803071)
chr3 (425-498)||(46344930-46345003)
chr3 (433-505)||(9582548-9582620)
chr3 (433-505)||(29929427-29929499)
chr3 (433-505)||(29978581-29978653)
chr3 (465-521)||(40877757-40877813)
chr3 (465-505)||(41844182-41844222)
chr3 (9-93)||(10478582-10478663)
chr3 (380-522)||(33471420-33471560)
chr3 (463-505)||(7941141-7941183)
chr3 (427-505)||(13896876-13896954)
chr3 (463-505)||(19988633-19988675)
chr3 (463-505)||(27738636-27738678)
chr3 (434-500)||(30256008-30256074)
chr3 (463-505)||(32744152-32744194)
chr3 (463-505)||(43478830-43478872)
chr3 (467-505)||(48566377-48566415)
chr3 (425-505)||(4002505-4002585)
chr3 (422-474)||(45101879-45101931)
[»] scaffold0608 (1 HSPs)
scaffold0608 (29-93)||(8576-8640)
[»] scaffold0012 (2 HSPs)
scaffold0012 (381-484)||(232497-232600)
scaffold0012 (463-523)||(232814-232874)
[»] scaffold1379 (1 HSPs)
scaffold1379 (380-505)||(434-559)
[»] scaffold0618 (1 HSPs)
scaffold0618 (424-498)||(3877-3951)
[»] scaffold0016 (1 HSPs)
scaffold0016 (463-505)||(68409-68451)
[»] scaffold0794 (1 HSPs)
scaffold0794 (463-505)||(5302-5344)
[»] scaffold0169 (1 HSPs)
scaffold0169 (440-486)||(1676-1722)
[»] scaffold0341 (1 HSPs)
scaffold0341 (404-505)||(17351-17452)
[»] scaffold0388 (1 HSPs)
scaffold0388 (432-480)||(11735-11783)
[»] scaffold0360 (1 HSPs)
scaffold0360 (433-505)||(7304-7376)


Alignment Details
Target: chr8 (Bit Score: 116; Significance: 9e-59; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 364 - 523
Target Start/End: Original strand, 21406199 - 21406358
Alignment:
Q  364 aagagaattgttgaaaacacatttgataagattgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgac 463  Q
    |||||||||| |||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |    
T  21406199 aagagaattgctgaatacacatttgataagactgagaaacactagtaaaataccaaaatatcccctctgcagttaactgccgaggaattcataaaccggc 21406298  T
Q  464 tgcagttaactactgaggaaaacttcggtagttaactaccgatgatacttcaaaccttaa 523  Q
    ||||||||||||| ||||||||||||||||||||||| |||| || ||||||||||||||    
T  21406299 tgcagttaactaccgaggaaaacttcggtagttaactgccgaggaaacttcaaaccttaa 21406358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 364 - 523
Target Start/End: Original strand, 21800691 - 21800850
Alignment:
Q  364 aagagaattgttgaaaacacatttgataagattgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgac 463  Q
    |||||||||| |||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |    
T  21800691 aagagaattgctgaatacacatttgataagactgagaaacactagtaaaataccaaaatatcccctctgcagttaactgccgaggaattcataaaccggc 21800790  T
Q  464 tgcagttaactactgaggaaaacttcggtagttaactaccgatgatacttcaaaccttaa 523  Q
    ||||||||||||| ||||||||||||||||||||||| |||| || ||||||||||||||    
T  21800791 tgcagttaactaccgaggaaaacttcggtagttaactgccgaggaaacttcaaaccttaa 21800850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 366 - 521
Target Start/End: Original strand, 38134296 - 38134454
Alignment:
Q  366 gagaattgttgaaaacacatttgataagattgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactg 465  Q
    ||||||||||||| ||||||||||||||  ||||||| |||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||| |||||    
T  38134296 gagaattgttgaatacacatttgataaggctgagaaacactagtaaaataccaaaataccccctttgcagttaactgccgaggaattcataaaccgactg 38134395  T
Q  466 cagttaactact---gaggaaaacttcggtagttaactaccgatgatacttcaaacctt 521  Q
    ||||||||||||   ||||||||||||| ||||||||| |||| || | ||||||||||    
T  38134396 cagttaactactaccgaggaaaacttcgatagttaactgccgaggaaaattcaaacctt 38134454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 366 - 523
Target Start/End: Complemental strand, 21835318 - 21835161
Alignment:
Q  366 gagaattgttgaaaacacatttgataagattgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactg 465  Q
    |||||||| |||| ||||||||||||||  ||||||| |||||||||||||||||||| ||||||||||||||| ||  ||||||||||||||| | |||    
T  21835318 gagaattgctgaatacacatttgataaggctgagaaacactagtaaaataccaaaataccccctctgcagttaaatgtcgaggaattcataaaccggctg 21835219  T
Q  466 cagttaactactgaggaaaacttcggtagttaactaccgatgatacttcaaaccttaa 523  Q
    ||||||||||| |||||||||||||||| |||||| |||| || ||| ||||||||||    
T  21835218 cagttaactaccgaggaaaacttcggtatttaactgccgaggaaactacaaaccttaa 21835161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 366 - 523
Target Start/End: Complemental strand, 38135747 - 38135593
Alignment:
Q  366 gagaattgttgaaaacacatttgataagattgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactg 465  Q
    |||||| | |||| ||| |||||||||| |||||||| || ||||||||| ||||||||||||||||||||||||||| |||||||| |||||| | |||    
T  38135747 gagaatggctgaatacagatttgataag-ttgagaaacaccagtaaaatatcaaaatatcccctctgcagttaactgccgaggaatttataaaccggctg 38135649  T
Q  466 cagttaactactgaggaaaacttcggtagttaactaccgatgatacttcaaaccttaa 523  Q
    ||||||||||| |||||||| ||||||| ||||   |||| || ||||||||||||||    
T  38135648 cagttaactaccgaggaaaatttcggtaattaa--gccgaggaaacttcaaaccttaa 38135593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 463 - 523
Target Start/End: Complemental strand, 44727547 - 44727487
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccgatgatacttcaaaccttaa 523  Q
    |||||||||||||| |||||||||||||||||||||||  ||| || ||||||||||||||    
T  44727547 ctgcagttaactaccgaggaaaacttcggtagttaactttcgaggaaacttcaaaccttaa 44727487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 430 - 505
Target Start/End: Original strand, 38330514 - 38330589
Alignment:
Q  430 ctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||| | |||||| ||  |||| | |||||||||||||||||||||||| |||| |||||||||||||    
T  38330514 ctgcagttaactaccgaggaagtctaaaaccggctgcagttaactactgaggaaaacctcggcagttaactaccga 38330589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 369 - 505
Target Start/End: Complemental strand, 28646383 - 28646247
Alignment:
Q  369 aattgttgaaaacacatttgataagattgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactgcag 468  Q
    ||||||||  |||||||| ||  || |||||||| || ||||||| ||  |||| ||||  | |||||||| ||| |||||||| | |||  | ||||||    
T  28646383 aattgttgttaacacattagaggaggttgagaaacacaagtaaaagacgtaaatgtccctgcagcagttaattgccgaggaatttaaaaatcggctgcag 28646284  T
Q  469 ttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||| | |||||||||||||| |||||||||||||    
T  28646283 ttaactgccgaggaaaacttcggcagttaactaccga 28646247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 369 - 505
Target Start/End: Complemental strand, 28650967 - 28650831
Alignment:
Q  369 aattgttgaaaacacatttgataagattgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactgcag 468  Q
    ||||||||  |||||||| ||  || |||||||| || ||||||| ||  |||| ||||  | |||||||| ||| |||||||| | |||  | ||||||    
T  28650967 aattgttgttaacacattagaggaggttgagaaacacaagtaaaagacgtaaatgtccctgcagcagttaattgccgaggaatttaaaaatcggctgcag 28650868  T
Q  469 ttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||| | |||||||||||||| |||||||||||||    
T  28650867 ttaactgccgaggaaaacttcggcagttaactaccga 28650831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 426 - 505
Target Start/End: Original strand, 22577659 - 22577738
Alignment:
Q  426 ccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    ||||| |||||||| |||||||||||||| ||| ||  |||||||||||   ||||||||| ||||||||||||| ||||    
T  22577659 ccctcggcagttaattgctgaggaattcaaaaattggttgcagttaactgtcgaggaaaacctcggtagttaactgccga 22577738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 463 - 505
Target Start/End: Original strand, 25994477 - 25994519
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    ||||||||||||||||||||||||||||| ||| |||||||||    
T  25994477 ctgcagttaactactgaggaaaacttcggcagtaaactaccga 25994519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 463 - 505
Target Start/End: Original strand, 36345034 - 36345076
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    ||||||||||||||||||||||||||||| ||| |||||||||    
T  36345034 ctgcagttaactactgaggaaaacttcggcagtaaactaccga 36345076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 427 - 505
Target Start/End: Original strand, 41855363 - 41855441
Alignment:
Q  427 cctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||| |||||||||||  || ||||||| |||  | |||||||||||| | ||||||||| ||||||||||||||||||    
T  41855363 cctcggcagttaactgtcgaagaattcaaaaatcggctgcagttaactgccgaggaaaacctcggtagttaactaccga 41855441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 463 - 505
Target Start/End: Complemental strand, 43520818 - 43520776
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||| |||||||||||||||| |||||||||||||    
T  43520818 ctgcagttaactgctgaggaaaacttcggcagttaactaccga 43520776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 432 - 505
Target Start/End: Original strand, 18438634 - 18438707
Alignment:
Q  432 gcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    ||||||||||| |||||||||||  ||| | |||||||||||| | ||||||||| |||| |||||||| ||||    
T  18438634 gcagttaactgttgaggaattcaataaccggctgcagttaactgccgaggaaaacctcgggagttaactgccga 18438707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 432 - 505
Target Start/End: Original strand, 42602460 - 42602533
Alignment:
Q  432 gcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||| || ||||||| |||| |  ||||||||||| | ||||||||| ||||||||||||| ||||    
T  42602460 gcagttaactgccgaagaattcaaaaaccggatgcagttaactgccgaggaaaacctcggtagttaactgccga 42602533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 463 - 503
Target Start/End: Original strand, 3695398 - 3695438
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactacc 503  Q
    |||||||||||||| |||||||||||||||||| |||||||    
T  3695398 ctgcagttaactaccgaggaaaacttcggtagtaaactacc 3695438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 498
Target Start/End: Original strand, 31745213 - 31745248
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaa 498  Q
    ||||||||||||||||||||||||||||| ||||||    
T  31745213 ctgcagttaactactgaggaaaacttcggcagttaa 31745248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 505
Target Start/End: Original strand, 914748 - 914790
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||| | |||||||||||||||||| |||||||||    
T  914748 ctgcagttaactgccgaggaaaacttcggtagtaaactaccga 914790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 505
Target Start/End: Complemental strand, 2335190 - 2335148
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||| | |||||||||||||||||| |||||||||    
T  2335190 ctgcagttaactgccgaggaaaacttcggtagtaaactaccga 2335148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 505
Target Start/End: Complemental strand, 7121828 - 7121786
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||| |||||||||||||||| |||||||| ||||    
T  7121828 ctgcagttaactgctgaggaaaacttcggcagttaactgccga 7121786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 435 - 505
Target Start/End: Original strand, 7168091 - 7168161
Alignment:
Q  435 gttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||| |||| || ||||||| |||| | |||||||||||| | ||||||||| ||||||||| ||||||||    
T  7168091 gttagctgccgaagaattcaaaaaccggctgcagttaactgccgaggaaaacctcggtagttgactaccga 7168161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 435 - 505
Target Start/End: Original strand, 18205789 - 18205859
Alignment:
Q  435 gttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    ||||||||| || ||||||| |||| | |||||||||||| |  |||||||| ||||||||||||| ||||    
T  18205789 gttaactgccgaagaattcaaaaaccggctgcagttaactgccaaggaaaacctcggtagttaactgccga 18205859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 505
Target Start/End: Complemental strand, 32383247 - 32383205
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||||| ||||||||| ||||||||||||| ||||    
T  32383247 ctgcagttaactaccgaggaaaacctcggtagttaactgccga 32383205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 505
Target Start/End: Complemental strand, 32437202 - 32437160
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||||| ||||||||| ||||||||||||| ||||    
T  32437202 ctgcagttaactaccgaggaaaacctcggtagttaactgccga 32437160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 505
Target Start/End: Complemental strand, 40745326 - 40745284
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    ||||||||||||||  ||||||||||||||||| |||||||||    
T  40745326 ctgcagttaactaccaaggaaaacttcggtagtaaactaccga 40745284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 505
Target Start/End: Original strand, 43262452 - 43262494
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||| | ||||||||||||||||||||||| ||||    
T  43262452 ctgcagttaactgccgaggaaaacttcggtagttaactgccga 43262494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Original strand, 34366942 - 34366987
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccgatga 508  Q
    |||||||||||| | ||||||||| ||||||||||||| |||||||    
T  34366942 ctgcagttaacttccgaggaaaacctcggtagttaactgccgatga 34366987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Complemental strand, 44052268 - 44052223
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccgatga 508  Q
    ||||||||| |||| ||||||||| |||||||||||||||| ||||    
T  44052268 ctgcagttacctaccgaggaaaacctcggtagttaactaccaatga 44052223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 500
Target Start/End: Complemental strand, 45133315 - 45133278
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaact 500  Q
    |||||||||||||| ||||||||||||||| |||||||    
T  45133315 ctgcagttaactaccgaggaaaacttcggttgttaact 45133278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 424 - 508
Target Start/End: Complemental strand, 2147037 - 2146954
Alignment:
Q  424 tcccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccgatga 508  Q
    ||||||| |||||||||||| | ||||||   |||| | ||||||| |||| | ||||||||| ||||||||||||| |||||||    
T  2147037 tcccctcagcagttaactgccggggaatttg-aaaccggctgcagtaaactgccgaggaaaacctcggtagttaactgccgatga 2146954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 465 - 505
Target Start/End: Original strand, 22014279 - 22014319
Alignment:
Q  465 gcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||| | ||||||||| ||||||||||||||||||    
T  22014279 gcagttaactgccgaggaaaacctcggtagttaactaccga 22014319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 463 - 503
Target Start/End: Complemental strand, 31746031 - 31745991
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactacc 503  Q
    |||||||||||||| |||||||||||||| ||| |||||||    
T  31746031 ctgcagttaactaccgaggaaaacttcggcagtaaactacc 31745991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 461 - 505
Target Start/End: Complemental strand, 34892853 - 34892809
Alignment:
Q  461 gactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||||| | |||||||||||||| |||||||| ||||    
T  34892853 gactgcagttaactgccgaggaaaacttcggcagttaactgccga 34892809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 461 - 505
Target Start/End: Complemental strand, 36314362 - 36314318
Alignment:
Q  461 gactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||||||| ||||||||||| |||||  |||||||||    
T  36314362 gactgcagttaactaccgaggaaaactttggtagaaaactaccga 36314318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 424 - 500
Target Start/End: Complemental strand, 38873011 - 38872935
Alignment:
Q  424 tcccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaact 500  Q
    |||||||  ||||||||| | |||||||| | |||| | |||||||||||| | ||||||||| |||||| ||||||    
T  38873011 tcccctcgtcagttaactaccgaggaatttaaaaaccggctgcagttaactgccgaggaaaacctcggtaattaact 38872935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 461 - 505
Target Start/End: Complemental strand, 40039728 - 40039684
Alignment:
Q  461 gactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||||||| ||||||||| ||| ||||||||| ||||    
T  40039728 gactgcagttaactaccgaggaaaacctcgatagttaactgccga 40039684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 461 - 505
Target Start/End: Complemental strand, 40077294 - 40077250
Alignment:
Q  461 gactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||||| | ||||||||| ||||||||||||| ||||    
T  40077294 gactgcagttaactgccgaggaaaacctcggtagttaactgccga 40077250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 425 - 505
Target Start/End: Complemental strand, 42605314 - 42605234
Alignment:
Q  425 cccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||| |||||||||||  || ||||||| |||  | |||||||||||| | || |||||| ||||||||||||| ||||    
T  42605314 cccctcggcagttaactgtcgaagaattcaaaaatcggctgcagttaactgccgatgaaaacatcggtagttaactgccga 42605234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 3e-49; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 366 - 521
Target Start/End: Complemental strand, 3941289 - 3941134
Alignment:
Q  366 gagaattgttgaaaacacatttgataagattgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactg 465  Q
    |||||||| |||| ||||||||||||||  ||||||| | |||||||||||||||||| | ||||||||||||||||| ||||||||||||||||| |||    
T  3941289 gagaattgctgaagacacatttgataaggctgagaaacagtagtaaaataccaaaatacctcctctgcagttaactgccgaggaattcataaactggctg 3941190  T
Q  466 cagttaactactgaggaaaacttcggtagttaactaccgatgatacttcaaacctt 521  Q
    ||||||||||| ||||||||||||||||||||||| |||| || ||||||||||||    
T  3941189 cagttaactaccgaggaaaacttcggtagttaactgccgaggaaacttcaaacctt 3941134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 380 - 523
Target Start/End: Original strand, 46043454 - 46043597
Alignment:
Q  380 acacatttgataagattgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactgcagttaactactga 479  Q
    ||||||||||||||  ||||||| || ||||||||||||||||||| ||||||||||||||| | |||||||||||||| || ||||| |||||||| ||    
T  46043454 acacatttgataaggctgagaaacacgagtaaaataccaaaatatctcctctgcagttaactaccgaggaattcataaattggctgcaattaactaccga 46043553  T
Q  480 ggaaaacttcggtagttaactaccgatgatacttcaaaccttaa 523  Q
    ||||||||||||||||||||| |||| || ||||||||||||||    
T  46043554 ggaaaacttcggtagttaactgccgaggaaacttcaaaccttaa 46043597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 369 - 523
Target Start/End: Complemental strand, 45943862 - 45943708
Alignment:
Q  369 aattgttgaaaacacatttgataagattgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactgcag 468  Q
    |||||||||  ||||||||||||||  ||||||| ||||||||||||  ||||||||   | ||||||||| ||  ||||||||||||||| | ||| ||    
T  45943862 aattgttgatgacacatttgataaggctgagaaacactagtaaaatattaaaatatcttttttgcagttaattgtcgaggaattcataaaccggctgtag 45943763  T
Q  469 ttaactactgaggaaaacttcggtagttaactaccgatgatacttcaaaccttaa 523  Q
    |||||||| ||||||||||||||||||||||| |||| || ||||||||||||||    
T  45943762 ttaactaccgaggaaaacttcggtagttaactgccgaggaaacttcaaaccttaa 45943708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 368 - 484
Target Start/End: Complemental strand, 46044864 - 46044747
Alignment:
Q  368 gaattgttgaaaacacatttgataagattgagaaaaactagtaaaa-taccaaaatatcccctctgcagttaactgctgaggaattcataaactgactgc 466  Q
    |||||| |||| ||||||||||||||  ||||||| |||||||||| ||| ||||||  |||||||||||||||||| || |||||||||||| | ||||    
T  46044864 gaattgctgaatacacatttgataaggctgagaaacactagtaaaaatactaaaatactccctctgcagttaactgccgaagaattcataaaccggctgc 46044765  T
Q  467 agttaactactgaggaaa 484  Q
    |||||||||| |||||||    
T  46044764 agttaactaccgaggaaa 46044747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 396 - 505
Target Start/End: Original strand, 1167526 - 1167635
Alignment:
Q  396 tgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagt 495  Q
    ||||||| || ||||||||||||||||| ||||||||||||||||||| ||||||     |||| |||||||||||||||  ||||||||| |||| |||    
T  1167526 tgagaaacacaagtaaaataccaaaataccccctctgcagttaactgccgaggaaaagtaaaaccgactgcagttaactatcgaggaaaacctcggcagt 1167625  T
Q  496 taactaccga 505  Q
    ||||||||||    
T  1167626 taactaccga 1167635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 367 - 521
Target Start/End: Original strand, 3939889 - 3940043
Alignment:
Q  367 agaattgttgaaaacacatttgataagattgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactgc 466  Q
    ||||||| |||| | ||||||||||||  ||| ||| |||| |||||||||||||||   |||||||| |||| ||  || |||||||||||  | ||||    
T  3939889 agaattgctgaatatacatttgataaggctgataaacactaataaaataccaaaatacttcctctgcaattaattgtcgaagaattcataaatcggctgc 3939988  T
Q  467 agttaactactgaggaaaacttcggtagttaactaccgatgatacttcaaacctt 521  Q
    |||||| ||| ||  ||||||||||||||||||| |||| || ||||||||||||    
T  3939989 agttaattaccgataaaaacttcggtagttaactgccgaggaaacttcaaacctt 3940043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 396 - 520
Target Start/End: Original strand, 26606763 - 26606886
Alignment:
Q  396 tgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagt 495  Q
    ||||||| || ||||||||||||||||| |||||| | | |||||||| |||||| |   ||||||||| ||||||||||| |||||||||||||| |||    
T  26606763 tgagaaacacgagtaaaataccaaaata-cccctcggtaattaactgccgaggaaatacgaaactgactacagttaactaccgaggaaaacttcggcagt 26606861  T
Q  496 taactaccgatgatacttcaaacct 520  Q
    ||||| |||| || || ||||||||    
T  26606862 taactgccgaggaaacctcaaacct 26606886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 381 - 523
Target Start/End: Complemental strand, 48751534 - 48751392
Alignment:
Q  381 cacatttgataagattgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgag 480  Q
    |||||||||||||  ||||||| ||||||||||||| |   || |||||| ||| | |||||| |||||||| | || | | |||||||||| | | |||    
T  48751534 cacatttgataaggctgagaaacactagtaaaatacgattttaccccctcggcactgaactgccgaggaattaaaaatccggctgcagttaattgccgag 48751435  T
Q  481 gaaaacttcggtagttaactaccgatgatacttcaaaccttaa 523  Q
    |||||| ||||||||||||| |||| || ||||||||||||||    
T  48751434 gaaaacctcggtagttaactgccgaggaaacttcaaaccttaa 48751392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 432 - 500
Target Start/End: Complemental strand, 41804106 - 41804038
Alignment:
Q  432 gcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaact 500  Q
    |||||||||||| |||||||||| |||| |||||||||||||| | ||||||||| |||||||||||||    
T  41804106 gcagttaactgccgaggaattcaaaaaccgactgcagttaactgccgaggaaaacctcggtagttaact 41804038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 463 - 523
Target Start/End: Complemental strand, 46217360 - 46217300
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccgatgatacttcaaaccttaa 523  Q
    |||||||||||||| ||||||||||||||||||||||| |||| || ||||||||||||||    
T  46217360 ctgcagttaactaccgaggaaaacttcggtagttaactgccgaggaaacttcaaaccttaa 46217300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 464 - 523
Target Start/End: Complemental strand, 29425377 - 29425318
Alignment:
Q  464 tgcagttaactactgaggaaaacttcggtagttaactaccgatgatacttcaaaccttaa 523  Q
    ||||||||||||| ||||||||||||||||||||||| |||| || ||||||||||||||    
T  29425377 tgcagttaactaccgaggaaaacttcggtagttaactgccgaggaaacttcaaaccttaa 29425318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 4482979 - 4483060
Alignment:
Q  9 aggaggtaaaaaagtaataaataaataattcttataataatttcatgcacaatatattactttgctctaatccataaaatatatc 93  Q
    ||||||||||||||||    |||||||||||||||||||||||||||| || |||||||||||||  | |||||||||| |||||    
T  4482979 aggaggtaaaaaagtat---ataaataattcttataataatttcatgcccattatattactttgcaattatccataaaacatatc 4483060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 385 - 523
Target Start/End: Complemental strand, 51290080 - 51289942
Alignment:
Q  385 tttgataagattgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaa 484  Q
    |||||||||  ||||||| ||||||||||||  |   || |||||| |||||||||| |||||||||| | || | |  ||||||||||| | |||||||    
T  51290080 tttgataaggctgagaaacactagtaaaataagattttaccccctcggcagttaactactgaggaattaaaaatccggttgcagttaactgccgaggaaa 51289981  T
Q  485 acttcggtagttaactaccgatgatacttcaaaccttaa 523  Q
    || |||||||||| || ||||||| |||| |||||||||    
T  51289980 acctcggtagttagctgccgatgaaactttaaaccttaa 51289942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 463 - 523
Target Start/End: Original strand, 46216429 - 46216489
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccgatgatacttcaaaccttaa 523  Q
    |||||||||||||  ||||||||||||||||||||||| |||| || ||||||||||||||    
T  46216429 ctgcagttaactatcgaggaaaacttcggtagttaactgccgaggaaacttcaaaccttaa 46216489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 432 - 505
Target Start/End: Original strand, 46141782 - 46141855
Alignment:
Q  432 gcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||| ||||||||||  ||| | |||||||||||| | ||||||||| ||||||||||||| ||||    
T  46141782 gcagttaactgccgaggaattcaataaccggctgcagttaactgccgaggaaaacatcggtagttaactgccga 46141855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 398 - 505
Target Start/End: Original strand, 15549826 - 15549933
Alignment:
Q  398 agaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaact-gactgcagttaactactgaggaaaacttcggtagtt 496  Q
    ||||| |||||||||||||||||||| || |||||||||||||||| || |||   ||||| | | |||||||||||| | ||||||||| ||||  |||    
T  15549826 agaaacactagtaaaataccaaaatacccactctgcagttaactgccgaagaa-agataaaataggctgcagttaactgcagaggaaaacctcggctgtt 15549924  T
Q  497 aactaccga 505  Q
    |||||||||    
T  15549925 aactaccga 15549933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 457 - 505
Target Start/End: Complemental strand, 49502870 - 49502822
Alignment:
Q  457 aactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    ||||| |||||||||||||| |||||||||||||| |||||||||||||    
T  49502870 aactggctgcagttaactaccgaggaaaacttcggcagttaactaccga 49502822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 433 - 500
Target Start/End: Original strand, 11183187 - 11183254
Alignment:
Q  433 cagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaact 500  Q
    |||||||||||||||||||| | || | | |||||||||||| | ||||||||| |||||||||||||    
T  11183187 cagttaactgctgaggaattaaaaatccggctgcagttaactgccgaggaaaacctcggtagttaact 11183254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 463 - 523
Target Start/End: Original strand, 29424411 - 29424473
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccgatg--atacttcaaaccttaa 523  Q
    |||||||||||||| ||||||||||||||||||||||| |||| |  | ||||||||||||||    
T  29424411 ctgcagttaactaccgaggaaaacttcggtagttaactgccgaggaaacacttcaaaccttaa 29424473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 425 - 505
Target Start/End: Complemental strand, 18975200 - 18975120
Alignment:
Q  425 cccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||| || ||||||||  |||||||| |  |||||  ||||||||||| | ||||||||||||||||||||||| ||||    
T  18975200 cccctcggcggttaactgtcgaggaatttaataactggttgcagttaactgcagaggaaaacttcggtagttaactgccga 18975120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 505
Target Start/End: Complemental strand, 13178211 - 13178132
Alignment:
Q  426 ccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    ||||| |||||||||||||||| |||| | ||||   |||||||||||| ||||||||||| |||  |||||||| ||||    
T  13178211 ccctcggcagttaactgctgagaaatttaaaaaccagctgcagttaactgctgaggaaaacctcgagagttaactgccga 13178132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 425 - 500
Target Start/End: Complemental strand, 23276188 - 23276113
Alignment:
Q  425 cccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaact 500  Q
    |||||| ||||||||||||||||||||| | || | | || ||||||||| | ||||||||| ||| |||||||||    
T  23276188 cccctcggcagttaactgctgaggaattaaaaatccggctacagttaactgccgaggaaaacctcgatagttaact 23276113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 503
Target Start/End: Original strand, 23603552 - 23603590
Alignment:
Q  465 gcagttaactactgaggaaaacttcggtagttaactacc 503  Q
    |||||||||||||||||||||| |||| |||||||||||    
T  23603552 gcagttaactactgaggaaaacctcggcagttaactacc 23603590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 432 - 486
Target Start/End: Original strand, 46973204 - 46973258
Alignment:
Q  432 gcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaac 486  Q
    |||||||||||| |||||||||| |||| | |||||||||||| | |||||||||    
T  46973204 gcagttaactgccgaggaattcaaaaaccggctgcagttaactgccgaggaaaac 46973258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 505
Target Start/End: Complemental strand, 50037312 - 50037270
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||||| ||||||||| |||| |||||||||||||    
T  50037312 ctgcagttaactaccgaggaaaacctcggcagttaactaccga 50037270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 497
Target Start/End: Complemental strand, 6437612 - 6437547
Alignment:
Q  432 gcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagtta 497  Q
    |||||||||||| |||||| |||  ||  ||||||||||||||||  |||||||| ||||||||||    
T  6437612 gcagttaactgccgaggaagtcaataatcgactgcagttaactaccaaggaaaacctcggtagtta 6437547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 505
Target Start/End: Complemental strand, 6562262 - 6562161
Alignment:
Q  404 actagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactacc 503  Q
    ||||||||||||| |   || |||||| |||||||||||| ||||||||   || | | |||||||||||| | ||||||| | ||||||||||||| ||    
T  6562262 actagtaaaatacgattttaccccctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaatcctcggtagttaactgcc 6562163  T
Q  504 ga 505  Q
    ||    
T  6562162 ga 6562161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 502
Target Start/End: Complemental strand, 17514765 - 17514728
Alignment:
Q  465 gcagttaactactgaggaaaacttcggtagttaactac 502  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  17514765 gcagttaactattgaggaaaacttcggcagttaactac 17514728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 505
Target Start/End: Complemental strand, 27115896 - 27115823
Alignment:
Q  432 gcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||| ||| |||||||| | |||| | |||||||||||| | || ||||||||||  |||||||||||||    
T  27115896 gcagttaattgccgaggaatttaaaaaccggctgcagttaactgccgaagaaaacttcgtcagttaactaccga 27115823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 461 - 498
Target Start/End: Original strand, 46341677 - 46341714
Alignment:
Q  461 gactgcagttaactactgaggaaaacttcggtagttaa 498  Q
    |||||||||||||||| |||||||||||||| ||||||    
T  46341677 gactgcagttaactaccgaggaaaacttcggcagttaa 46341714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 505
Target Start/End: Original strand, 49660847 - 49660896
Alignment:
Q  456 aaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||| |||||||||||| | |||||||||||||| ||| |||||||||    
T  49660847 aaactggctgcagttaactgccgaggaaaacttcggcagtaaactaccga 49660896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 505
Target Start/End: Original strand, 52802130 - 52802203
Alignment:
Q  432 gcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||| ||||||||   || | | |||||||||||| | ||||||||| ||||||||||||| ||||    
T  52802130 gcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccga 52802203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 434 - 509
Target Start/End: Original strand, 13147497 - 13147573
Alignment:
Q  434 agttaactgctgaggaattcata-aactgactgcagttaactactgaggaaaacttcggtagttaactaccgatgat 509  Q
    |||||||||||||||||   ||| ||| |||||||||||||||| ||||||||| |||  ||||||||  |||||||    
T  13147497 agttaactgctgaggaaaaaatagaaccgactgcagttaactaccgaggaaaacctcgacagttaactgtcgatgat 13147573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 425 - 505
Target Start/End: Original strand, 13173829 - 13173908
Alignment:
Q  425 cccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||| |||||||||||||| |||||||| |||| | |||||||||||  | ||||||||| | || |||||||| ||||    
T  13173829 cccctcggcagttaactgctg-ggaattcaaaaaccggctgcagttaacagccgaggaaaaccttggcagttaactgccga 13173908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 465 - 505
Target Start/End: Complemental strand, 18609935 - 18609895
Alignment:
Q  465 gcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||| |||||||||||||| |||||||| ||||    
T  18609935 gcagttaactaccgaggaaaacttcggcagttaactgccga 18609895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 465 - 505
Target Start/End: Complemental strand, 20353975 - 20353935
Alignment:
Q  465 gcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||| | ||||||||||||||||||||||| ||||    
T  20353975 gcagttaactgccgaggaaaacttcggtagttaactgccga 20353935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 425 - 505
Target Start/End: Complemental strand, 23359429 - 23359349
Alignment:
Q  425 cccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||| |||||||| ||| ||||||||   || | | |||||||||||||| ||||||||| |||||||| |||| ||||    
T  23359429 cccctcggcagttaattgccgaggaatttgaaatccggctgcagttaactaccgaggaaaacctcggtagtaaactgccga 23359349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 461 - 505
Target Start/End: Original strand, 26769192 - 26769236
Alignment:
Q  461 gactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    ||||||||||||||||  ||||||||||||| ||| |||||||||    
T  26769192 gactgcagttaactacccaggaaaacttcggcagtaaactaccga 26769236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 425 - 505
Target Start/End: Complemental strand, 29438100 - 29438020
Alignment:
Q  425 cccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||| |||||||||||| ||   ||| | |||| | |||||||||||||| ||||||||| |||||| |||||| ||||    
T  29438100 cccctcggcagttaactgcagaaatattaaaaaaccggctgcagttaactaccgaggaaaacctcggtaattaactgccga 29438020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 425 - 505
Target Start/End: Complemental strand, 44470091 - 44470011
Alignment:
Q  425 cccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||| |||||||||||| ||||||||   || | | |||||||||||| | ||||||||| |||| |||||||| ||||    
T  44470091 cccctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcgggagttaactgccga 44470011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 461 - 505
Target Start/End: Complemental strand, 49875383 - 49875339
Alignment:
Q  461 gactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||||||  |||||||||||||| ||| |||||||||    
T  49875383 gactgcagttaactatcgaggaaaacttcggcagtaaactaccga 49875339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 2e-44; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 380 - 523
Target Start/End: Original strand, 9472806 - 9472949
Alignment:
Q  380 acacatttgataagattgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactgcagttaactactga 479  Q
    ||||||||||||||  ||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  9472806 acacatttgataaggctgagaaacactagtaaaatactaaaataccccctctgcagttaactgctgaggaattcataaactggctgcagttaactaccga 9472905  T
Q  480 ggaaaacttcggtagttaactaccgatgatacttcaaaccttaa 523  Q
    ||||| |||||||| ||||||  ||| || ||||||||||||||    
T  9472906 ggaaatcttcggtaattaactgtcgaggaaacttcaaaccttaa 9472949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 369 - 523
Target Start/End: Complemental strand, 9473797 - 9473643
Alignment:
Q  369 aattgttgaaaacacatttgataagattgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactgcag 468  Q
    |||||||||  ||||||||||||||  | ||||| ||| |||||||| ||||||| | ||||||||||||| ||  ||||||||||||||  | ||||||    
T  9473797 aattgttgatgacacatttgataaggctaagaaacactggtaaaatatcaaaataccacctctgcagttaattgtcgaggaattcataaatcggctgcag 9473698  T
Q  469 ttaactactgaggaaaacttcggtagttaactaccgatgatacttcaaaccttaa 523  Q
    |||||||| |||||||| |||||||||||||| || | || ||||||||||||||    
T  9473697 ttaactaccgaggaaaatttcggtagttaactgccaaggaaacttcaaaccttaa 9473643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 366 - 523
Target Start/End: Original strand, 17342075 - 17342233
Alignment:
Q  366 gagaattgttgaaaacacatttgataa-gattgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgact 464  Q
    ||||||||||||| ||||||||||||| |  | ||||| | |||||||||| | ||||| | | ||||||||||||||| ||||||||||||||  | ||    
T  17342075 gagaattgttgaagacacatttgataaaggctcagaaacattagtaaaatatccaaatacctcatctgcagttaactgccgaggaattcataaatcggct 17342174  T
Q  465 gcagttaactactgaggaaaacttcggtagttaactaccgatgatacttcaaaccttaa 523  Q
    |||||||||||| ||| ||||||||||||||||||| ||||  | ||||||||||||||    
T  17342175 gcagttaactaccgagaaaaacttcggtagttaactgccgagaaaacttcaaaccttaa 17342233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 365 - 518
Target Start/End: Complemental strand, 17343541 - 17343389
Alignment:
Q  365 agagaattgttgaaaacacatttgataagattgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgact 464  Q
    ||||||||| |||| |||||||||||| | | |||||| |||||||||||| ||||||||||| ||||||||||||||  ||||||||||||||| |  |    
T  17343541 agagaattgctgaagacacatttgataggct-gagaaacactagtaaaatatcaaaatatcccatctgcagttaactgtcgaggaattcataaaccggtt 17343443  T
Q  465 gcagttaactactgaggaaaacttcggtagttaactaccgatgatacttcaaac 518  Q
    |||||||| ||| || ||||||||| |||||||||| ||||  | |||||||||    
T  17343442 gcagttaattaccgaagaaaacttctgtagttaactgccgagaaaacttcaaac 17343389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 396 - 523
Target Start/End: Complemental strand, 19994398 - 19994276
Alignment:
Q  396 tgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagt 495  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||  |||||||||||||| | |||| |||||    ||||    
T  19994398 tgagaaacactagtaaaataccaaaataccccttctgcagttaactgccgaggaattcataaaacgactgcagttaactcccgagg-aaact----tagt 19994304  T
Q  496 taactaccgatgatacttcaaaccttaa 523  Q
    ||||| |||| || ||||||||||||||    
T  19994303 taactgccgaggaaacttcaaaccttaa 19994276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 431 - 505
Target Start/End: Original strand, 34503708 - 34503782
Alignment:
Q  431 tgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    ||||||||||||| |||||||||||||||   |||||||||||||| ||| ||||||||||||||||||| ||||    
T  34503708 tgcagttaactgccgaggaattcataaaccagctgcagttaactaccgagaaaaacttcggtagttaactgccga 34503782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 408 - 474
Target Start/End: Original strand, 19993018 - 19993084
Alignment:
Q  408 gtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactgcagttaact 474  Q
    |||||||||||||||||||||||| ||||||||||| ||| ||||||||||| | || |||||||||    
T  19993018 gtaaaataccaaaatatcccctctacagttaactgccgagaaattcataaaccggctacagttaact 19993084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 433 - 509
Target Start/End: Complemental strand, 29700374 - 29700298
Alignment:
Q  433 cagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccgatgat 509  Q
    ||||||||||||||||||||||  ||| | |||||||||||| | ||||||||| ||||||||||| | ||||||||    
T  29700374 cagttaactgctgaggaattcaataaccggctgcagttaactgccgaggaaaacctcggtagttaattgccgatgat 29700298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 463 - 505
Target Start/End: Complemental strand, 36480582 - 36480540
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  36480582 ctgcagttaactaccgaggaaaacttcggtagttaactaccga 36480540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 432 - 505
Target Start/End: Original strand, 955792 - 955865
Alignment:
Q  432 gcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    ||||||||||||||||||||||| |||  | |||||||||||| | ||| ||||| ||||||||||||| ||||    
T  955792 gcagttaactgctgaggaattcaaaaatcggctgcagttaactgccgagaaaaacctcggtagttaactgccga 955865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 364 - 505
Target Start/End: Original strand, 11494476 - 11494616
Alignment:
Q  364 aagagaattgttgaaaacacatttgataagattgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgac 463  Q
    |||||||||||||   |||||||||| |||  ||||||| || ||||||||||     | ||||||| ||| |||||||  |||||||||| |||| | |    
T  11494476 aagagaattgttgtcgacacatttgaaaagggtgagaaacacgagtaaaatacgtttttgtcccctcggcaattaactgtcgaggaattca-aaaccggc 11494574  T
Q  464 tgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    ||||||||||| | ||||||||| ||||||||||||| ||||    
T  11494575 tgcagttaactgccgaggaaaacctcggtagttaactgccga 11494616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 396 - 505
Target Start/End: Original strand, 15995686 - 15995795
Alignment:
Q  396 tgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagt 495  Q
    ||||||| || |||||| |||| ||||| |||||| |||||||| ||| ||||||||   || | | |||||||||||| | ||||||||| ||||||||    
T  15995686 tgagaaacacaagtaaattacccaaataccccctcggcagttaaatgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcggtagt 15995785  T
Q  496 taactaccga 505  Q
    ||||| ||||    
T  15995786 taactgccga 15995795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 396 - 505
Target Start/End: Original strand, 19069151 - 19069260
Alignment:
Q  396 tgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagt 495  Q
    ||||||| || |||||| |||| ||||| |||||| |||||||| ||| ||||||||   || | | |||||||||||| | ||||||||| ||||||||    
T  19069151 tgagaaacacaagtaaattacccaaataccccctcggcagttaaatgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcggtagt 19069250  T
Q  496 taactaccga 505  Q
    ||||| ||||    
T  19069251 taactgccga 19069260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 432 - 505
Target Start/End: Original strand, 21470903 - 21470976
Alignment:
Q  432 gcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||  |||| ||||| ||||||||||||||||||  | ||||||||| ||||||||||||| ||||    
T  21470903 gcagttaactgtcgaggtattcaaaaactgactgcagttaaccgcagaggaaaacctcggtagttaactgccga 21470976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 463 - 509
Target Start/End: Complemental strand, 4786376 - 4786330
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccgatgat 509  Q
    |||||||||||||||||||||||| ||||| ||||||| ||||||||    
T  4786376 ctgcagttaactactgaggaaaacctcggttgttaactgccgatgat 4786330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 461 - 503
Target Start/End: Complemental strand, 21538533 - 21538491
Alignment:
Q  461 gactgcagttaactactgaggaaaacttcggtagttaactacc 503  Q
    ||||||||||||||||||||||||||||| | |||||||||||    
T  21538533 gactgcagttaactactgaggaaaacttcagcagttaactacc 21538491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 463 - 505
Target Start/End: Complemental strand, 40240415 - 40240373
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    ||||||||||||||||||||||||||||| ||| |||||||||    
T  40240415 ctgcagttaactactgaggaaaacttcggcagtaaactaccga 40240373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 425 - 510
Target Start/End: Original strand, 9889987 - 9890072
Alignment:
Q  425 cccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccgatgata 510  Q
    |||||| |||||||||||| ||||||||   || | | |||||||||||| | ||||||||| ||||||||||||| |||| ||||    
T  9889987 cccctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggata 9890072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 396 - 505
Target Start/End: Complemental strand, 15999908 - 15999799
Alignment:
Q  396 tgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagt 495  Q
    ||||||| || |||||| |||| ||||| |||||| |||||||||||| ||| ||||   || | | ||||| |||||| | ||||||||| ||||||||    
T  15999908 tgagaaacacaagtaaattacccaaataccccctcggcagttaactgccgagaaatttgaaatccggctgcaattaactgccgaggaaaacctcggtagt 15999809  T
Q  496 taactaccga 505  Q
    ||||| ||||    
T  15999808 taactgccga 15999799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 457 - 518
Target Start/End: Complemental strand, 20209375 - 20209315
Alignment:
Q  457 aactgactgcagttaactactgaggaaaacttcggtagttaactaccgatgatacttcaaac 518  Q
    ||||| |||||||||||| ||||| ||||||||||||||||||| |||| || |||||||||    
T  20209375 aactggctgcagttaactgctgagtaaaacttcggtagttaactgccga-gaaacttcaaac 20209315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 425 - 505
Target Start/End: Complemental strand, 37959800 - 37959720
Alignment:
Q  425 cccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||| ||||||||||| ||||||||| |  |||   |||||||||||| | ||||||||| ||||||||||||| ||||    
T  37959800 cccctcggcagttaactgttgaggaatttaataaccagctgcagttaactgccgaggaaaacatcggtagttaactgccga 37959720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 463 - 523
Target Start/End: Complemental strand, 48807428 - 48807369
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccgatgatacttcaaaccttaa 523  Q
    |||||||||||| |||||||||||||||| |||||||| | ||||| | ||||||||||||    
T  48807428 ctgcagttaactgctgaggaaaacttcggcagttaactgctgatga-atttcaaaccttaa 48807369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 505
Target Start/End: Complemental strand, 1736133 - 1736091
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||||| |||||||||||||| ||| |||||||||    
T  1736133 ctgcagttaactaccgaggaaaacttcggcagtaaactaccga 1736091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 505
Target Start/End: Original strand, 12376016 - 12376058
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||||| |||||||||||||| ||| |||||||||    
T  12376016 ctgcagttaactaccgaggaaaacttcggcagtaaactaccga 12376058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 505
Target Start/End: Complemental strand, 23221712 - 23221670
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||| | |||||||||||||||||| |||||||||    
T  23221712 ctgcagttaactgccgaggaaaacttcggtagtaaactaccga 23221670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 505
Target Start/End: Original strand, 38368259 - 38368301
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||| | |||||||||||||||||| |||||||||    
T  38368259 ctgcagttaactgccgaggaaaacttcggtagtaaactaccga 38368301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 505
Target Start/End: Complemental strand, 40240752 - 40240710
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    ||||||||||||||||||||||||||||  ||| |||||||||    
T  40240752 ctgcagttaactactgaggaaaacttcgacagtaaactaccga 40240710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 505
Target Start/End: Original strand, 40832674 - 40832716
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||| |||||||||||||||| ||| |||||||||    
T  40832674 ctgcagttaactgctgaggaaaacttcggcagtaaactaccga 40832716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 505
Target Start/End: Complemental strand, 43176670 - 43176628
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||| | |||||||||||||| |||||||||||||    
T  43176670 ctgcagttaactgccgaggaaaacttcggcagttaactaccga 43176628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 505
Target Start/End: Original strand, 55587386 - 55587428
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||| | |||||||||||||||||| |||||||||    
T  55587386 ctgcagttaactgccgaggaaaacttcggtagtaaactaccga 55587428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 474
Target Start/End: Original strand, 4768671 - 4768720
Alignment:
Q  425 cccctctgcagttaactgctgaggaattcataaactgactgcagttaact 474  Q
    |||||| |||||||||||| |||||||||| || ||| ||||||||||||    
T  4768671 cccctcggcagttaactgccgaggaattcaaaatctggctgcagttaact 4768720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 500
Target Start/End: Original strand, 6280888 - 6280925
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaact 500  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  6280888 ctgcagttaaatactgaggaaaacatcggtagttaact 6280925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 466 - 503
Target Start/End: Complemental strand, 21343416 - 21343379
Alignment:
Q  466 cagttaactactgaggaaaacttcggtagttaactacc 503  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  21343416 cagttaactaccgaggaaaacttcggtagtaaactacc 21343379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Complemental strand, 39590610 - 39590565
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccgatga 508  Q
    |||||||||||| | ||||||||| ||||||||||||| |||||||    
T  39590610 ctgcagttaactgccgaggaaaacctcggtagttaactgccgatga 39590565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 433 - 505
Target Start/End: Complemental strand, 958665 - 958594
Alignment:
Q  433 cagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    ||||||||||| || ||||||| |||| |  ||||||||||| | ||||||||| ||||||||||||| ||||    
T  958665 cagttaactgc-gatgaattcaaaaaccggttgcagttaactgccgaggaaaacctcggtagttaactgccga 958594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 461 - 505
Target Start/End: Complemental strand, 9655953 - 9655909
Alignment:
Q  461 gactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||||||| |||||||||||||| ||| |||| ||||    
T  9655953 gactgcagttaactaccgaggaaaacttcggcagtaaactgccga 9655909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 457 - 489
Target Start/End: Complemental strand, 32365989 - 32365957
Alignment:
Q  457 aactgactgcagttaactactgaggaaaacttc 489  Q
    |||||||||||||||||||| ||||||||||||    
T  32365989 aactgactgcagttaactaccgaggaaaacttc 32365957  T

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Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 463 - 507
Target Start/End: Complemental strand, 41933664 - 41933620
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccgatg 507  Q
    |||||||||||||| ||| ||||| ||||||||||||| ||||||    
T  41933664 ctgcagttaactaccgagaaaaacctcggtagttaactgccgatg 41933620  T

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Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 468 - 520
Target Start/End: Original strand, 42528904 - 42528956
Alignment:
Q  468 gttaactactgaggaaaacttcggtagttaactaccgatgatacttcaaacct 520  Q
    ||||||||| |||||||||||||| |||||||| |||| || || ||||||||    
T  42528904 gttaactaccgaggaaaacttcggcagttaactgccgaagaaacctcaaacct 42528956  T

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Target: scaffold1500 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 380 - 523
Target Start/End: Complemental strand, 884 - 741
Alignment:
Q  380 acacatttgataagattgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactgcagttaactactga 479  Q
    ||||||||||||||  ||||||| |||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||| | |||| |||||||||  |    
T  884 acacatttgataaggctgagaaacactattaaaataccaaaataccccctctgcagttaactgccgaggaattcataaaccggctgctgttaactaccta 785  T
Q  480 ggaaaacttcggtagttaactaccgatgatacttcaaaccttaa 523  Q
    ||||||||||||||||||||| |||| || || |||||||||||    
T  784 ggaaaacttcggtagttaactgccgaggaaacgtcaaaccttaa 741  T

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Target: chr2 (Bit Score: 84; Significance: 1e-39; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 380 - 523
Target Start/End: Complemental strand, 42177339 - 42177196
Alignment:
Q  380 acacatttgataagattgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactgcagttaactactga 479  Q
    ||||||||||||||  ||||||| |||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||| | |||| |||||||||  |    
T  42177339 acacatttgataaggctgagaaacactattaaaataccaaaataccccctctgcagttaactgccgaggaattcataaaccggctgctgttaactaccta 42177240  T
Q  480 ggaaaacttcggtagttaactaccgatgatacttcaaaccttaa 523  Q
    ||||||||||||||||||||| |||| || || |||||||||||    
T  42177239 ggaaaacttcggtagttaactgccgaggaaacgtcaaaccttaa 42177196  T

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Target: chr2; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 366 - 442
Target Start/End: Original strand, 42176015 - 42176091
Alignment:
Q  366 gagaattgttgaaaacacatttgataagattgagaaaaactagtaaaataccaaaatatcccctctgcagttaactg 442  Q
    |||||||| |||| ||||||||||||||  ||| ||| |||||||||||||||||||| ||||||||||||||||||    
T  42176015 gagaattgctgaatacacatttgataaggctgaaaaacactagtaaaataccaaaataccccctctgcagttaactg 42176091  T

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Target: chr2; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 396 - 505
Target Start/End: Original strand, 14456466 - 14456575
Alignment:
Q  396 tgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagt 495  Q
    ||||||| || ||||||||||||||||| ||||||||||||||||||| ||| ||     |||| | |||||||||||| | ||||||||| |||| |||    
T  14456466 tgagaaacaccagtaaaataccaaaataccccctctgcagttaactgccgagcaaaaataaaaccggctgcagttaactgccgaggaaaacctcggcagt 14456565  T
Q  496 taactaccga 505  Q
    ||||||||||    
T  14456566 taactaccga 14456575  T

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Target: chr2; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 396 - 479
Target Start/End: Complemental strand, 40539203 - 40539120
Alignment:
Q  396 tgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactgcagttaactactga 479  Q
    ||||||| || ||||||||||||||||||||||||   |||||||||| |||||| |   ||||||||||||||||||||||||    
T  40539203 tgagaaacacgagtaaaataccaaaatatcccctcgatagttaactgccgaggaaatatgaaactgactgcagttaactactga 40539120  T

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Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 396 - 500
Target Start/End: Original strand, 30271038 - 30271142
Alignment:
Q  396 tgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagt 495  Q
    ||||||| |||||||||| ||| ||||| ||| || | ||||||  | ||||||||| | || | | |||||||||||| ||||||||||||||||||||    
T  30271038 tgagaaacactagtaaaagaccgaaataccccttcggtagttaaaggttgaggaattaaaaatccggctgcagttaactgctgaggaaaacttcggtagt 30271137  T
Q  496 taact 500  Q
    |||||    
T  30271138 taact 30271142  T

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Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 434 - 505
Target Start/End: Original strand, 24601641 - 24601712
Alignment:
Q  434 agttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||  |||||||| | |||||| |||||||||||||| ||||||| ||||||||||||||| ||||    
T  24601641 agttaactgtcgaggaatttaaaaactggctgcagttaactaccgaggaaatcttcggtagttaactgccga 24601712  T

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Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 434 - 505
Target Start/End: Complemental strand, 24612473 - 24612402
Alignment:
Q  434 agttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||  |||||||| | |||||| |||||||||||||| ||||||| ||||||||||||||| ||||    
T  24612473 agttaactgtcgaggaatttaaaaactggctgcagttaactaccgaggaaatcttcggtagttaactgccga 24612402  T

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Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 434 - 505
Target Start/End: Complemental strand, 34921830 - 34921759
Alignment:
Q  434 agttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||| ||| |||||| |||| | |||||||||||| ||||||||||| ||||||||||||| ||||    
T  34921830 agttaactgccgagaaattcaaaaaccggctgcagttaactgctgaggaaaacctcggtagttaactgccga 34921759  T

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Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 25944953 - 25945034
Alignment:
Q  9 aggaggtaaaaaagtaataaataaataattcttataataatttcatgcacaatatattactttgctctaatccataaaatatatc 93  Q
    ||||||||||||||||    ||||||||||||||| |||||||||||| || |||||||||||||  | |||||||||| |||||    
T  25944953 aggaggtaaaaaagtat---ataaataattcttatgataatttcatgcccattatattactttgcaattatccataaaacatatc 25945034  T

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Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 425 - 505
Target Start/End: Original strand, 45475433 - 45475513
Alignment:
Q  425 cccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||| |||||||||||| ||| |||||| |||| | || ||||||||| | ||||||||| ||||||||||||| ||||    
T  45475433 cccctcggcagttaactgccgagaaattcaaaaaccggctacagttaactgccgaggaaaacctcggtagttaacttccga 45475513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 450
Target Start/End: Complemental strand, 958717 - 958663
Alignment:
Q  396 tgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaa 450  Q
    ||||||| || ||||||||||||||||| ||||||||||||||||| | ||||||    
T  958717 tgagaaacaccagtaaaataccaaaataccccctctgcagttaactaccgaggaa 958663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 461 - 507
Target Start/End: Complemental strand, 25515852 - 25515806
Alignment:
Q  461 gactgcagttaactactgaggaaaacttcggtagttaactaccgatg 507  Q
    |||||||||||||||| |||||| |||||||||||||||| ||||||    
T  25515852 gactgcagttaactaccgaggaagacttcggtagttaacttccgatg 25515806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 463 - 505
Target Start/End: Complemental strand, 26544031 - 26543989
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||||||||||||||| ||||||||||||| ||||    
T  26544031 ctgcagttaactactgaggaaaacctcggtagttaactgccga 26543989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 432 - 505
Target Start/End: Complemental strand, 23409574 - 23409501
Alignment:
Q  432 gcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||| ||| |||||||||| |||||| |||||||||||| | ||||||||| |||| ||| |||| ||||    
T  23409574 gcagttaattgccgaggaattcaaaaactggctgcagttaactgccgaggaaaacctcggaagtaaactgccga 23409501  T

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Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 456 - 505
Target Start/End: Original strand, 29905482 - 29905531
Alignment:
Q  456 aaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||| |||||||||||| ||| |||||||||||||||||| |||||||||    
T  29905482 aaaccgactgcagttaattaccgaggaaaacttcggtagtaaactaccga 29905531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 425 - 505
Target Start/End: Complemental strand, 35493421 - 35493341
Alignment:
Q  425 cccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||| | |||||||||| |||||||||| ||||   |||||||||||| | ||||||||  ||||||||||||| ||||    
T  35493421 cccctcggtagttaactgccgaggaattcaaaaaccagctgcagttaactgccgaggaaaatatcggtagttaactgccga 35493341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 463 - 523
Target Start/End: Complemental strand, 43258775 - 43258715
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccgatgatacttcaaaccttaa 523  Q
    |||||||||||||| || |||||||| ||||||||||| |||| || ||||||||| ||||    
T  43258775 ctgcagttaactaccgaagaaaactttggtagttaactgccgaggaaacttcaaactttaa 43258715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 503
Target Start/End: Original strand, 41497476 - 41497543
Alignment:
Q  436 ttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactacc 503  Q
    |||||||| || ||||||| |||| | |||||||||| | | ||||||||| ||||||||||||||||    
T  41497476 ttaactgccgaagaattcaaaaaccggctgcagttaattgccgaggaaaacctcggtagttaactacc 41497543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 432 - 486
Target Start/End: Original strand, 2648798 - 2648852
Alignment:
Q  432 gcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaac 486  Q
    ||||||||||||  ||||||||| |||| | |||||||||||||| |||||||||    
T  2648798 gcagttaactgccaaggaattcaaaaaccggctgcagttaactaccgaggaaaac 2648852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 505
Target Start/End: Complemental strand, 7189993 - 7189951
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||| | ||||||||||||||||||||||| ||||    
T  7189993 ctgcagttaactgccgaggaaaacttcggtagttaactgccga 7189951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 396 - 442
Target Start/End: Original strand, 19694202 - 19694248
Alignment:
Q  396 tgagaaaaactagtaaaataccaaaatatcccctctgcagttaactg 442  Q
    ||||||| || ||||||||||||||||| |||||||| |||||||||    
T  19694202 tgagaaacaccagtaaaataccaaaataccccctctgtagttaactg 19694248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 498
Target Start/End: Complemental strand, 27276475 - 27276381
Alignment:
Q  404 actagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaa 498  Q
    ||||||||||||| |   || |||||| |||||||||||||||||||||   || | | |||||||||||| | ||||||||| |||| ||||||    
T  27276475 actagtaaaatacgattttaccccctcggcagttaactgctgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcgggagttaa 27276381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 505
Target Start/End: Original strand, 29600791 - 29600833
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||||| |||||||||||||| ||| |||||||||    
T  29600791 ctgcagttaactaccgaggaaaacttcggcagtaaactaccga 29600833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 435 - 505
Target Start/End: Original strand, 35490683 - 35490753
Alignment:
Q  435 gttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    ||||||||| || ||||||| |||| | |||||||||||| |||| |||||| | ||||||||||| ||||    
T  35490683 gttaactgccgaagaattcaaaaaccggctgcagttaactgctgaagaaaaccttggtagttaactgccga 35490753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 521
Target Start/End: Complemental strand, 38779659 - 38779601
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccgatgatacttcaaacctt 521  Q
    ||||||| |||||| |||||||||||||  |||||||| |||| || ||||||||||||    
T  38779659 ctgcagtaaactaccgaggaaaacttcgacagttaactgccgaggaaacttcaaacctt 38779601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 427 - 505
Target Start/End: Complemental strand, 41009005 - 41008928
Alignment:
Q  427 cctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||| |||||||||||| ||||||||  ||| | | ||||| |||||| | ||||||||||||||||||||||| ||||    
T  41009005 cctcggcagttaactgccgaggaatttgtaaccgg-ctgcatttaactgccgaggaaaacttcggtagttaactgccga 41008928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 505
Target Start/End: Complemental strand, 41183266 - 41183224
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||||| ||||||||| ||||||||||||| ||||    
T  41183266 ctgcagttaactaccgaggaaaacctcggtagttaactgccga 41183224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 505
Target Start/End: Original strand, 43618604 - 43618646
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||||| ||||||||| |||| |||||||||||||    
T  43618604 ctgcagttaactaccgaggaaaacctcggcagttaactaccga 43618646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 467 - 508
Target Start/End: Original strand, 28419442 - 28419483
Alignment:
Q  467 agttaactactgaggaaaacttcggtagttaactaccgatga 508  Q
    |||||||||| |||||||||||||| |||||||| |||||||    
T  28419442 agttaactaccgaggaaaacttcggcagttaactgccgatga 28419483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 520
Target Start/End: Complemental strand, 33416963 - 33416906
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccgatgatacttcaaacct 520  Q
    |||||||||||||| ||||| |||||||| ||| ||||||||| || || ||||||||    
T  33416963 ctgcagttaactaccgaggataacttcggcagtaaactaccgaggaaacctcaaacct 33416906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 466 - 502
Target Start/End: Complemental strand, 3086105 - 3086069
Alignment:
Q  466 cagttaactactgaggaaaacttcggtagttaactac 502  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  3086105 cagttaactgctgaggaaaacttcggcagttaactac 3086069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 396 - 452
Target Start/End: Complemental strand, 3803652 - 3803596
Alignment:
Q  396 tgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaatt 452  Q
    ||||||| || |||||| |||| ||||||||| || |||||||||||| ||||||||    
T  3803652 tgagaaacacaagtaaattacccaaatatcccatcggcagttaactgccgaggaatt 3803596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 461 - 505
Target Start/End: Original strand, 4014293 - 4014337
Alignment:
Q  461 gactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||||||| |||||||||||||| ||| | |||||||    
T  4014293 gactgcagttaactaccgaggaaaacttcggcagtaagctaccga 4014337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 425 - 505
Target Start/End: Complemental strand, 25184909 - 25184830
Alignment:
Q  425 cccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||| |||||||||||  ||||||||   |||| | |||||||||||| | ||||||||| ||||||||||||| ||||    
T  25184909 cccctcagcagttaactgtcgaggaatttg-aaaccggctgcagttaactgccgaggaaaacctcggtagttaactgccga 25184830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 425 - 505
Target Start/End: Complemental strand, 34639394 - 34639314
Alignment:
Q  425 cccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||| |||| ||||||| ||| |||| | || | | |||||||||||| ||||||||||| |||| |||||||| ||||    
T  34639394 cccctcggcaggtaactgccgagaaattaaaaatccggctgcagttaactgctgaggaaaacatcgggagttaactgccga 34639314  T

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Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 465 - 505
Target Start/End: Complemental strand, 44100838 - 44100798
Alignment:
Q  465 gcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||| | ||||||||| ||||||||||||||||||    
T  44100838 gcagttaactgccgaggaaaacctcggtagttaactaccga 44100798  T

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Target: chr7 (Bit Score: 76; Significance: 7e-35; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 380 - 523
Target Start/End: Complemental strand, 42025210 - 42025067
Alignment:
Q  380 acacatttgataagattgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactgcagttaactactga 479  Q
    ||||||||||||||  ||| ||| |||| ||||||||||||||| |||||||| |||||||||| ||||||||||||||| || ||||||||||||| ||    
T  42025210 acacatttgataaggctgataaacactaataaaataccaaaataccccctctgtagttaactgccgaggaattcataaaccgattgcagttaactacaga 42025111  T
Q  480 ggaaaacttcggtagttaactaccgatgatacttcaaaccttaa 523  Q
    | |||||||||||||||||||  ||| || |||||||| |||||    
T  42025110 gaaaaacttcggtagttaactgtcgaggaaacttcaaatcttaa 42025067  T

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Target: chr7; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 396 - 521
Target Start/End: Complemental strand, 40142770 - 40142645
Alignment:
Q  396 tgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagt 495  Q
    ||||||| |||||||||||||||||||| ||||||||||||||| ||  ||||||||||||||| |  ||||||||||||| || ||||||||| ||| |    
T  40142770 tgagaaacactagtaaaataccaaaataccccctctgcagttaattgtcgaggaattcataaaccggttgcagttaactaccgaagaaaacttctgtaat 40142671  T
Q  496 taactaccgatgatacttcaaacctt 521  Q
    ||||| ||||  | ||||||||||||    
T  40142670 taactgccgagaaaacttcaaacctt 40142645  T

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Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 405 - 523
Target Start/End: Original strand, 40141387 - 40141505
Alignment:
Q  405 ctagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccg 504  Q
    |||||||||||| |||||||  | |||||| |||| |||  | |||||||||||  | |||||||||||||| ||| ||||||| ||||||||| | |||    
T  40141387 ctagtaaaatactaaaatatgtcttctgcaattaattgccaaagaattcataaatcggctgcagttaactaccgagaaaaactttggtagttaattgccg 40141486  T
Q  505 atgatacttcaaaccttaa 523  Q
    | || ||||||||||||||    
T  40141487 aggaaacttcaaaccttaa 40141505  T

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Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 380 - 450
Target Start/End: Original strand, 45350855 - 45350925
Alignment:
Q  380 acacatttgataagattgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaa 450  Q
    |||||| | |||||| ||||||| || ||||||||||||||||| ||||||||||||||||||| ||||||    
T  45350855 acacatgttataagactgagaaacaccagtaaaataccaaaataccccctctgcagttaactgccgaggaa 45350925  T

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Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 366 - 425
Target Start/End: Complemental strand, 7611851 - 7611792
Alignment:
Q  366 gagaattgttgaaaacacatttgataagattgagaaaaactagtaaaataccaaaatatc 425  Q
    ||||||||||||| ||||||||||||||  ||||||| ||||||||||||| ||||||||    
T  7611851 gagaattgttgaatacacatttgataaggctgagaaacactagtaaaatactaaaatatc 7611792  T

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Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 425 - 505
Target Start/End: Complemental strand, 30355319 - 30355239
Alignment:
Q  425 cccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||| |||||||| |||||| ||||||| |||  | |||||||||||| | ||||||||| ||||||||||||| ||||    
T  30355319 cccctcggcagttaattgctgaagaattcaaaaatcggctgcagttaactgccgaggaaaacctcggtagttaactgccga 30355239  T

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Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 425 - 505
Target Start/End: Original strand, 46860504 - 46860584
Alignment:
Q  425 cccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||| |||||||||||  |||||||| | |||| ||||||||||||||| ||||| |||| |||| |||||||| ||||    
T  46860504 cccctcggcagttaactgtcgaggaattgaaaaaccgactgcagttaactattgaggcaaacctcggcagttaactgccga 46860584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 425 - 500
Target Start/End: Complemental strand, 9494886 - 9494811
Alignment:
Q  425 cccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaact 500  Q
    |||||| |||||||||||| |||||||| | |||| | |||||||||||| | ||||||||| |||| ||||||||    
T  9494886 cccctcggcagttaactgccgaggaattaaaaaaccggctgcagttaactgccgaggaaaacctcgggagttaact 9494811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 407 - 474
Target Start/End: Complemental strand, 40166857 - 40166791
Alignment:
Q  407 agtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactgcagttaact 474  Q
    ||||||||||||||||| || ||| |||||||||||  |||||||||| |||| ||||||||||||||    
T  40166857 agtaaaataccaaaata-cctctcggcagttaactgtcgaggaattcagaaaccgactgcagttaact 40166791  T

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Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 425 - 500
Target Start/End: Original strand, 48314666 - 48314741
Alignment:
Q  425 cccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaact 500  Q
    |||||| |||||||||||| ||||||||||  ||| | |||||||||||||| || |||||| |||||| ||||||    
T  48314666 cccctcggcagttaactgccgaggaattcaataaccggctgcagttaactaccgacgaaaacctcggtacttaact 48314741  T

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Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 463 - 505
Target Start/End: Original strand, 45791336 - 45791378
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||||| |||||||||||||||||| |||||||||    
T  45791336 ctgcagttaactaccgaggaaaacttcggtagtaaactaccga 45791378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 432 - 505
Target Start/End: Complemental strand, 36395011 - 36394938
Alignment:
Q  432 gcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||| ||| || ||||||| |||| ||||||| |||| | | ||||||||| ||||||||||||||||||    
T  36395011 gcagttaattgccgaagaattcacaaaccgactgcaattaagtgccgaggaaaacctcggtagttaactaccga 36394938  T

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Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 505
Target Start/End: Original strand, 47776281 - 47776405
Alignment:
Q  381 cacatttgataagattgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgag 480  Q
    |||||||||||||  ||||||| || |||||||||| |   |  ||||||  ||||||||||| ||| |||| | || ||| |||||||||||| | |||    
T  47776281 cacatttgataaggctgagaaacacgagtaaaatacgattttgccccctcgacagttaactgccgagaaattaaaaatctggctgcagttaactgccgag 47776380  T
Q  481 gaaaacttcggtagttaactaccga 505  Q
    |||||| |||||| |||||| ||||    
T  47776381 gaaaacctcggtaattaactgccga 47776405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 471 - 521
Target Start/End: Complemental strand, 7953768 - 7953718
Alignment:
Q  471 aactactgaggaaaacttcggtagttaactaccgatgatacttcaaacctt 521  Q
    |||||| |||||||||||||| |||||||| |||| || ||||||||||||    
T  7953768 aactaccgaggaaaacttcggcagttaactgccgaggaaacttcaaacctt 7953718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 433 - 499
Target Start/End: Original strand, 34622500 - 34622566
Alignment:
Q  433 cagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaac 499  Q
    ||||||||||| |||||||| | |||| ||||||||||||||   ||||||| | ||||||||||||    
T  34622500 cagttaactgcagaggaattaagaaaccgactgcagttaactgtcgaggaaatcctcggtagttaac 34622566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 366 - 484
Target Start/End: Original strand, 39460487 - 39460605
Alignment:
Q  366 gagaattgttgaaaacacatttgataagattgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactg 465  Q
    |||||||||||   | |||||||||||| |||||||| || |||||||||| |   ||||| ||| |||||| | ||| |||||||| | || | | |||    
T  39460487 gagaattgttgtttatacatttgataaggttgagaaacacgagtaaaatacgattttatcctctcggcagttgattgccgaggaattaaaaatccggctg 39460586  T
Q  466 cagttaactactgaggaaa 484  Q
    ||||||||| |||||||||    
T  39460587 cagttaactgctgaggaaa 39460605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 505
Target Start/End: Complemental strand, 48901484 - 48901442
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||||| |||||||||||||| ||| |||||||||    
T  48901484 ctgcagttaactaccgaggaaaacttcggcagtaaactaccga 48901442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 505
Target Start/End: Original strand, 19044317 - 19044366
Alignment:
Q  456 aaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||| |||||||||||| | | ||||||||||||||||||||||| ||||    
T  19044317 aaaccgactgcagttaattgccgaggaaaacttcggtagttaactgccga 19044366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 505
Target Start/End: Complemental strand, 20710319 - 20710270
Alignment:
Q  456 aaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||| |||||||||||| | | ||||||||||||||||||||||| ||||    
T  20710319 aaaccgactgcagttaattgccgaggaaaacttcggtagttaactgccga 20710270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 500
Target Start/End: Original strand, 38265476 - 38265513
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaact 500  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  38265476 ctgcagttaactactgaggaaaacctcggcagttaact 38265513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 461 - 510
Target Start/End: Original strand, 42499438 - 42499487
Alignment:
Q  461 gactgcagttaactactgaggaaaacttcggtagttaactaccgatgata 510  Q
    |||||||||||||| | ||||||||| ||||||||||||| |||| ||||    
T  42499438 gactgcagttaactgccgaggaaaacctcggtagttaactgccgaggata 42499487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 461 - 505
Target Start/End: Complemental strand, 7953804 - 7953760
Alignment:
Q  461 gactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||||| |||||||||||||||| | | |||||||||    
T  7953804 gactgcagttaactgctgaggaaaacttcggcaataaactaccga 7953760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 433 - 505
Target Start/End: Complemental strand, 10225915 - 10225843
Alignment:
Q  433 cagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    ||||||||||  || |||| || ||| |||||| |||||||||| ||||||||  |||| |||||||||||||    
T  10225915 cagttaactgtcgatgaatgcaaaaattgactgaagttaactaccgaggaaaatctcggcagttaactaccga 10225843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 465 - 505
Target Start/End: Original strand, 17834520 - 17834560
Alignment:
Q  465 gcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||| | ||||||||||||||||||||||| ||||    
T  17834520 gcagttaactgccgaggaaaacttcggtagttaactgccga 17834560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 461 - 505
Target Start/End: Complemental strand, 17840934 - 17840890
Alignment:
Q  461 gactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||||| | ||||||||| ||||||||||||| ||||    
T  17840934 gactgcagttaactgccgaggaaaacctcggtagttaactgccga 17840890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 465 - 505
Target Start/End: Complemental strand, 30791048 - 30791008
Alignment:
Q  465 gcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||| ||||||||| ||||||||||||| ||||    
T  30791048 gcagttaactaccgaggaaaacctcggtagttaactgccga 30791008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 433 - 505
Target Start/End: Original strand, 37340303 - 37340375
Alignment:
Q  433 cagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    ||||||||||  |||||||||| |||| |  ||||||||||| | ||| ||||| ||||||||||||| ||||    
T  37340303 cagttaactgtcgaggaattcaaaaaccggttgcagttaactgccgagaaaaacctcggtagttaactgccga 37340375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 425 - 505
Target Start/End: Original strand, 47060920 - 47060999
Alignment:
Q  425 cccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||| |||||||||||  |||||||||| || | | ||| |||||||| | ||||||||| ||||||||||||| ||||    
T  47060920 cccctcggcagttaactgtcgaggaattcaaaatcgg-ctgtagttaactgccgaggaaaacctcggtagttaactgccga 47060999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 2e-32; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 364 - 523
Target Start/End: Original strand, 35241845 - 35241999
Alignment:
Q  364 aagagaattgttgaaaacacatttgataagattgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgac 463  Q
    |||||||||| |||| ||||||||||||||  ||||||  | |||||||||||||||||| ||||||||||||||||||  ||||||||||||||| | |    
T  35241845 aagagaattgctgaatacacatttgataaggctgagaagcattagtaaaataccaaaataccccctctgcagttaactgtcgaggaattcataaaccggc 35241944  T
Q  464 tgcagttaactactgaggaaaacttcggtagttaactaccgatgatacttcaaaccttaa 523  Q
    ||||||     || ||||||||||||||||||||||| | || || ||||||||||||||    
T  35241945 tgcagt-----accgaggaaaacttcggtagttaactgcggaggaaacttcaaaccttaa 35241999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 463 - 523
Target Start/End: Original strand, 32222560 - 32222620
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccgatgatacttcaaaccttaa 523  Q
    ||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||    
T  32222560 ctgcagttaactactgaggaaaacttcggtagttaacaaccgaggaaacttcaaaccttaa 32222620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 463 - 523
Target Start/End: Original strand, 9048106 - 9048166
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccgatgatacttcaaaccttaa 523  Q
    |||||||||||||| ||||||||||||||||||||||| |||| || ||||||||||||||    
T  9048106 ctgcagttaactaccgaggaaaacttcggtagttaactgccgaggaaacttcaaaccttaa 9048166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 366 - 523
Target Start/End: Complemental strand, 9049222 - 9049067
Alignment:
Q  366 gagaattgttgaaaacacatttgataagattgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactg 465  Q
    |||||||| |||| |||||||| ||||| |||||||| |||||||   ||| |||||  ||| ||  ||||||||||| || |  |  | |||| | |||    
T  9049222 gagaattgctgaatacacatttaataaggttgagaaacactagtactttacgaaaatg-cccttcgacagttaactgccgaagtttgaaaaaaccggctg 9049124  T
Q  466 cagttaactactgaggaaaacttcggtagttaactaccgatgatacttcaaaccttaa 523  Q
    ||||||||||| ||||||||||||||||||||||| |||| || ||||||||||||||    
T  9049123 cagttaactaccgaggaaaacttcggtagttaactgccgagga-acttcaaaccttaa 9049067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 463 - 523
Target Start/End: Complemental strand, 32223555 - 32223495
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccgatgatacttcaaaccttaa 523  Q
    ||||||||||| || ||||||||||||||||||||||| |||| || ||||||||||||||    
T  32223555 ctgcagttaaccaccgaggaaaacttcggtagttaactgccgaggaaacttcaaaccttaa 32223495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 396 - 502
Target Start/End: Original strand, 17596905 - 17597011
Alignment:
Q  396 tgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagt 495  Q
    ||||||| || ||||||||||||||||| ||||||||||||||||||  ||||||     |||| | |||||||||||| | ||||||||  |||| |||    
T  17596905 tgagaaacaccagtaaaataccaaaataccccctctgcagttaactgtcgaggaaaaataaaaccggctgcagttaactgccgaggaaaatctcggcagt 17597004  T
Q  496 taactac 502  Q
    |||||||    
T  17597005 taactac 17597011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 424 - 505
Target Start/End: Original strand, 23958882 - 23958963
Alignment:
Q  424 tcccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    ||||||| |||||||||||| ||| |||||  |||| | |||||||||| | | ||||||||| ||||||||||||| ||||    
T  23958882 tcccctcggcagttaactgccgagaaattccaaaaccggctgcagttaaatgccgaggaaaacctcggtagttaactgccga 23958963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 425 - 505
Target Start/End: Original strand, 13401479 - 13401559
Alignment:
Q  425 cccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||| |||||||||||| |||||||| | |||  | |||||||||||| || |||||||  | ||||||||||||||||    
T  13401479 cccctcggcagttaactgccgaggaattaaaaaatcggctgcagttaactgctaaggaaaatattggtagttaactaccga 13401559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 463 - 503
Target Start/End: Complemental strand, 14124760 - 14124720
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactacc 503  Q
    |||||||||| | ||||||||||||||||||||||||||||    
T  14124760 ctgcagttaattgctgaggaaaacttcggtagttaactacc 14124720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 425 - 505
Target Start/End: Original strand, 31768746 - 31768826
Alignment:
Q  425 cccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||| |||||||||||| |||||||| | || | | |||||||||| | | ||||||||| ||||||||||||| ||||    
T  31768746 cccctcggcagttaactgccgaggaattaaaaatccggctgcagttaattgccgaggaaaacctcggtagttaactgccga 31768826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 500
Target Start/End: Original strand, 13616253 - 13616308
Alignment:
Q  445 gaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaact 500  Q
    |||||||| | |||| |||||||||||||| || | ||||||||||||||||||||    
T  13616253 gaggaattaaaaaaccgactgcagttaactgctaaagaaaacttcggtagttaact 13616308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 502
Target Start/End: Original strand, 15545758 - 15545797
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactac 502  Q
    ||||||||||||||||||||||||||||| ||| ||||||    
T  15545758 ctgcagttaactactgaggaaaacttcggcagtaaactac 15545797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 505
Target Start/End: Original strand, 19757302 - 19757345
Alignment:
Q  462 actgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    ||||||||||||||  ||| ||||||||||||||||||||||||    
T  19757302 actgcagttaactatcgagaaaaacttcggtagttaactaccga 19757345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 505
Target Start/End: Complemental strand, 2110497 - 2110455
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||| |||||||||||||||| ||| |||||||||    
T  2110497 ctgcagttaactgctgaggaaaacttcggcagtaaactaccga 2110455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 505
Target Start/End: Complemental strand, 29076365 - 29076323
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||| ||||||||||| ||||||||||||| ||||    
T  29076365 ctgcagttaactgctgaggaaaacctcggtagttaactgccga 29076323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 505
Target Start/End: Complemental strand, 29097870 - 29097828
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||| ||||| ||||||||||||||||||| ||||    
T  29097870 ctgcagttaactgctgagaaaaacttcggtagttaactgccga 29097828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 505
Target Start/End: Complemental strand, 29109898 - 29109856
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||| ||||||||||| ||||||||||||| ||||    
T  29109898 ctgcagttaactgctgaggaaaacctcggtagttaactgccga 29109856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 505
Target Start/End: Complemental strand, 29111338 - 29111296
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||| ||||||||||| ||||||||||||| ||||    
T  29111338 ctgcagttaactgctgaggaaaacctcggtagttaactgccga 29111296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 505
Target Start/End: Complemental strand, 31516932 - 31516890
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||| | |||||||||||||| |||||||||||||    
T  31516932 ctgcagttaactcccgaggaaaacttcggcagttaactaccga 31516890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 500
Target Start/End: Original strand, 11157741 - 11157778
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaact 500  Q
    |||||||||||| |||||||||||||| ||||||||||    
T  11157741 ctgcagttaactgctgaggaaaacttcagtagttaact 11157778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 505
Target Start/End: Complemental strand, 32555637 - 32555588
Alignment:
Q  456 aaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||| ||||| |||||| |||| |||||||| ||||||||||||||||||    
T  32555637 aaaccgactgtagttaattactaaggaaaacctcggtagttaactaccga 32555588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 457 - 505
Target Start/End: Original strand, 17337673 - 17337721
Alignment:
Q  457 aactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    ||||| |||||||||||||| |||||||||||||| ||| |||| ||||    
T  17337673 aactggctgcagttaactaccgaggaaaacttcggcagtaaactcccga 17337721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 465 - 505
Target Start/End: Complemental strand, 26712263 - 26712223
Alignment:
Q  465 gcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||| | ||||||||| ||||||||||||||||||    
T  26712263 gcagttaactgccgaggaaaacctcggtagttaactaccga 26712223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 2e-22; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 381 - 523
Target Start/End: Complemental strand, 17967010 - 17966868
Alignment:
Q  381 cacatttgataagattgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgag 480  Q
    |||||||||||||  ||||||| ||||||||||||| |   || |||||| |||||||||||| ||| |||| | || | |||||||||||||||| |||    
T  17967010 cacatttgataaggctgagaaacactagtaaaatacgattttaccccctcggcagttaactgccgagaaattaaaaatccgactgcagttaactaccgag 17966911  T
Q  481 gaaaacttcggtagttaactaccgatgatacttcaaaccttaa 523  Q
    |||||  ||||||||||||| | || || ||||||||||||||    
T  17966910 gaaaatctcggtagttaactgctgaggaaacttcaaaccttaa 17966868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 407 - 505
Target Start/End: Complemental strand, 29430676 - 29430578
Alignment:
Q  407 agtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||     |||| | |||||||||||| ||||||||||| |||| |||||||||||||    
T  29430676 agtaaaataccaaaataccccctctgcagttaactgccgaggaaaaataaaaccggctgcagttaactgctgaggaaaacctcggcagttaactaccga 29430578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 396 - 505
Target Start/End: Original strand, 39742539 - 39742648
Alignment:
Q  396 tgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagt 495  Q
    ||||||| || ||||||||||||||||| ||||||||||||||||||| ||||||     |||| |||||||||||||| | ||||||||| || | |||    
T  39742539 tgagaaacaccagtaaaataccaaaataccccctctgcagttaactgccgaggaaaaataaaaccgactgcagttaactgccgaggaaaacctcagcagt 39742638  T
Q  496 taactaccga 505  Q
    ||||||||||    
T  39742639 taactaccga 39742648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 380 - 450
Target Start/End: Original strand, 25983350 - 25983420
Alignment:
Q  380 acacatttgataagattgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaa 450  Q
    |||||||||||||| |||||||| ||||||||||||||| |||| ||||||||||||||||| | ||||||    
T  25983350 acacatttgataaggttgagaaacactagtaaaataccacaataccccctctgcagttaactaccgaggaa 25983420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 407 - 505
Target Start/End: Original strand, 42098278 - 42098376
Alignment:
Q  407 agtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||||||||||| |||||||||||||||| ||||||     |||||| |||||||||||| | ||||||||| ||||  ||||||||||||    
T  42098278 agtaaaataccaaaatatcctctctgcagttaactgccgaggaaaaataaaactggctgcagttaactgccgaggaaaacctcggcggttaactaccga 42098376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 463 - 523
Target Start/End: Original strand, 25983400 - 25983460
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccgatgatacttcaaaccttaa 523  Q
    |||||||||||||| ||||||||| |||||||||||||||||| || ||||||||||||||    
T  25983400 ctgcagttaactaccgaggaaaacatcggtagttaactaccgaggaaacttcaaaccttaa 25983460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 433 - 500
Target Start/End: Complemental strand, 8702270 - 8702203
Alignment:
Q  433 cagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaact 500  Q
    ||||||||||| |||||||| | || |||||||||||||||| ||||||||||| |||||||||||||    
T  8702270 cagttaactgccgaggaattaaaaatctgactgcagttaactgctgaggaaaacctcggtagttaact 8702203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 385 - 523
Target Start/End: Original strand, 17965802 - 17965940
Alignment:
Q  385 tttgataagattgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaa 484  Q
    |||||||||  ||||||  ||||||||||||| |   ||||||||| |||||||| ||  |||||||| | ||   |||||||||||||| | |||||||    
T  17965802 tttgataaggctgagaatcactagtaaaatacgattttatcccctcggcagttaattgtcgaggaattaaaaattcgactgcagttaactgccgaggaaa 17965901  T
Q  485 acttcggtagttaactaccgatgatacttcaaaccttaa 523  Q
    || ||||||||||| | |||| || ||||||||||||||    
T  17965902 acatcggtagttaattgccgaggaaacttcaaaccttaa 17965940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 425 - 505
Target Start/End: Complemental strand, 18538415 - 18538335
Alignment:
Q  425 cccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||| |||||||| ||  |||||||||| |||| | |||||||||||| | ||||||||||||||||||||||| ||||    
T  18538415 cccctcggcagttaattgtcgaggaattcaaaaaccggctgcagttaactgccgaggaaaacttcggtagttaactgccga 18538335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 450
Target Start/End: Original strand, 13707386 - 13707441
Alignment:
Q  395 ttgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaa 450  Q
    |||||||| || ||||||||||||||||| ||||||||||||||||||| ||||||    
T  13707386 ttgagaaacaccagtaaaataccaaaataccccctctgcagttaactgccgaggaa 13707441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 408 - 505
Target Start/End: Complemental strand, 27532713 - 27532617
Alignment:
Q  408 gtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||||||| ||||||  ||||||||||| ||||||     ||||||||||||||||||||  ||||||||| |||| |||||||| ||||    
T  27532713 gtaaaataccaaaata-cccctcgacagttaactgccgaggaaaaataaaactgactgcagttaactatcgaggaaaacctcggcagttaactgccga 27532617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 433 - 505
Target Start/End: Complemental strand, 3603220 - 3603148
Alignment:
Q  433 cagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    ||||||||||| || |||||||  ||||| |||||||||||| | ||||||||| ||||||||||||| ||||    
T  3603220 cagttaactgccgaagaattcaataactggctgcagttaacttccgaggaaaacctcggtagttaactgccga 3603148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 433 - 505
Target Start/End: Original strand, 34682258 - 34682330
Alignment:
Q  433 cagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    ||||||||||  |||||||||| |||| | |||||||||||| | ||||||||| |||| |||||||||||||    
T  34682258 cagttaactgtcgaggaattcaaaaaccggctgcagttaactgccgaggaaaacctcgggagttaactaccga 34682330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 465 - 520
Target Start/End: Original strand, 35281839 - 35281894
Alignment:
Q  465 gcagttaactactgaggaaaacttcggtagttaactaccgatgatacttcaaacct 520  Q
    |||||||||| |||||||||||||||||||| ||||||||| || || ||||||||    
T  35281839 gcagttaactgctgaggaaaacttcggtagtaaactaccgaggaaacctcaaacct 35281894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 396 - 505
Target Start/End: Complemental strand, 13708040 - 13707931
Alignment:
Q  396 tgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagt 495  Q
    ||||||| || |||||||||| ||||||     ||||||||||||||| ||||||     ||| || |||||||||||||| ||||||||| |||| |||    
T  13708040 tgagaaacaccagtaaaatactaaaatactatttctgcagttaactgccgaggaaaaataaaagtggctgcagttaactaccgaggaaaacatcggcagt 13707941  T
Q  496 taactaccga 505  Q
    ||||||||||    
T  13707940 taactaccga 13707931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 501
Target Start/End: Original strand, 24050040 - 24050096
Alignment:
Q  445 gaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaacta 501  Q
    |||||||||| |||| | ||||| |||||| ||||||||||| ||||||||||||||    
T  24050040 gaggaattcaaaaaccggctgcacttaactgctgaggaaaacgtcggtagttaacta 24050096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 425 - 505
Target Start/End: Original strand, 25889987 - 25890067
Alignment:
Q  425 cccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||| ||||| |||||| ||||||||   || | |||||||||||||||| ||||||||| |||||||| |||| ||||    
T  25889987 cccctcagcagtaaactgccgaggaatttgaaatccgactgcagttaactaccgaggaaaacctcggtagtaaactgccga 25890067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 441
Target Start/End: Original strand, 13588648 - 13588685
Alignment:
Q  404 actagtaaaataccaaaatatcccctctgcagttaact 441  Q
    |||||||||||||||||||||||| || ||||||||||    
T  13588648 actagtaaaataccaaaatatcccttcggcagttaact 13588685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 441
Target Start/End: Original strand, 13589541 - 13589578
Alignment:
Q  404 actagtaaaataccaaaatatcccctctgcagttaact 441  Q
    |||||||||||||||||||||||| || ||||||||||    
T  13589541 actagtaaaataccaaaatatcccttcggcagttaact 13589578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 498
Target Start/End: Original strand, 20192354 - 20192419
Alignment:
Q  433 cagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaa 498  Q
    |||||||||||||| |||||||  ||  | |||||||||||| | ||||||||||||| |||||||    
T  20192354 cagttaactgctgaagaattcaataatcggctgcagttaactgccgaggaaaacttcgatagttaa 20192419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 505
Target Start/End: Complemental strand, 20509592 - 20509551
Alignment:
Q  464 tgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    ||||||||||||| |||||||||||||| ||| |||||||||    
T  20509592 tgcagttaactaccgaggaaaacttcggcagtaaactaccga 20509551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 465 - 501
Target Start/End: Original strand, 20421949 - 20421985
Alignment:
Q  465 gcagttaactactgaggaaaacttcggtagttaacta 501  Q
    |||||||||||| |||||||||||||| |||||||||    
T  20421949 gcagttaactaccgaggaaaacttcggcagttaacta 20421985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 445 - 505
Target Start/End: Original strand, 25497524 - 25497584
Alignment:
Q  445 gaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||| ||| || |||||||||||| | ||||||||  ||||||||||||| ||||    
T  25497524 gaggaattcaaaaattggctgcagttaactgccgaggaaaatctcggtagttaactgccga 25497584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 465 - 505
Target Start/End: Complemental strand, 42912918 - 42912878
Alignment:
Q  465 gcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||| |||||||||||||| |||||||| ||||    
T  42912918 gcagttaactaccgaggaaaacttcggcagttaactgccga 42912878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 6e-20; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 26959224 - 26959305
Alignment:
Q  9 aggaggtaaaaaagtaataaataaataattcttataataatttcatgcacaatatattactttgctctaatccataaaatatatc 93  Q
    ||||||||||||||||    |||||||||||||||||||||||||||| || |||||||||||||||| |||||||||| |||||    
T  26959224 aggaggtaaaaaagtat---ataaataattcttataataatttcatgcccattatattactttgctcttatccataaaacatatc 26959305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 424 - 505
Target Start/End: Complemental strand, 52570647 - 52570566
Alignment:
Q  424 tcccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    ||||||| |||||||||||| || ||||||| |||| |||||||||||||||| ||| ||||| ||||||||||||| ||||    
T  52570647 tcccctcggcagttaactgccgaagaattcaaaaaccgactgcagttaactaccgagaaaaacctcggtagttaactgccga 52570566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 427 - 505
Target Start/End: Original strand, 19440251 - 19440329
Alignment:
Q  427 cctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||| |||||||||||| || |||||||||||| | |||||||||||| | ||||||||| ||||||||||||| ||||    
T  19440251 cctcggcagttaactgccgaagaattcataaaccggctgcagttaactgccgaggaaaacctcggtagttaactgccga 19440329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 396 - 505
Target Start/End: Original strand, 2743362 - 2743471
Alignment:
Q  396 tgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagt 495  Q
    ||||||| || |||||| |||| |||||||||||| |||||||||||| ||||||||   || | | |||||||||||| | ||||||||| |||| |||    
T  2743362 tgagaaacacaagtaaattacccaaatatcccctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcgggagt 2743461  T
Q  496 taactaccga 505  Q
    ||||| ||||    
T  2743462 taactgccga 2743471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 425 - 505
Target Start/End: Complemental strand, 41579804 - 41579724
Alignment:
Q  425 cccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||| |||||||| ||||||||||||||  ||| | |||||||||||| | ||||||||| ||||||||||||| ||||    
T  41579804 cccctcggcagttaattgctgaggaattcaataaccggctgcagttaactgccgaggaaaacctcggtagttaactgccga 41579724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 463 - 520
Target Start/End: Complemental strand, 6144340 - 6144283
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccgatgatacttcaaacct 520  Q
    |||||||||||||| |||||||||||||| ||||||||||||| || || ||||||||    
T  6144340 ctgcagttaactaccgaggaaaacttcggcagttaactaccgaagaaacctcaaacct 6144283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 396 - 505
Target Start/End: Complemental strand, 9429958 - 9429849
Alignment:
Q  396 tgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagt 495  Q
    ||||||| || |||||| |||  ||||| |||||| |||||||||||| ||||||||   ||  || |||||||||| ||| ||||||||| ||||||||    
T  9429958 tgagaaacacaagtaaattacgcaaataccccctcggcagttaactgccgaggaatttgaaatttggctgcagttaagtaccgaggaaaacctcggtagt 9429859  T
Q  496 taactaccga 505  Q
    ||||| ||||    
T  9429858 taactgccga 9429849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 424 - 505
Target Start/End: Complemental strand, 19341675 - 19341594
Alignment:
Q  424 tcccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    ||||||| |||||||||||| ||||||||   || | | |||||||||||||| |||||||||||||| |||||||| ||||    
T  19341675 tcccctcggcagttaactgccgaggaattagaaatccggctgcagttaactaccgaggaaaacttcggcagttaactgccga 19341594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 425 - 505
Target Start/End: Complemental strand, 28611180 - 28611100
Alignment:
Q  425 cccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||| |||||||||||| ||| |||||| |||| | |||||||||||| | |||||||||  |||||||||||| ||||    
T  28611180 cccctcggcagttaactgccgagaaattcaaaaaccggctgcagttaactgccgaggaaaacaacggtagttaactgccga 28611100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 425 - 500
Target Start/End: Complemental strand, 7247940 - 7247865
Alignment:
Q  425 cccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaact 500  Q
    |||||| |||||||||||| ||||||||||  ||| | ||||||||||||   ||||||||| |||||||||||||    
T  7247940 cccctcggcagttaactgccgaggaattcaataaccggctgcagttaactgacgaggaaaacctcggtagttaact 7247865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 463 - 505
Target Start/End: Complemental strand, 21343536 - 21343494
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||||| |||||||||||||| |||||||||||||    
T  21343536 ctgcagttaactaccgaggaaaacttcggcagttaactaccga 21343494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 430 - 500
Target Start/End: Original strand, 49194951 - 49195021
Alignment:
Q  430 ctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaact 500  Q
    ||||||||||||||||||||||| | || | | ||||||||||||  | ||||||| ||||||||||||||    
T  49194951 ctgcagttaactgctgaggaattaaaaagccggctgcagttaactgttaaggaaaatttcggtagttaact 49195021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 432 - 505
Target Start/End: Original strand, 41802998 - 41803071
Alignment:
Q  432 gcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||| || ||||| | |||| | |||||||||||| | ||||||||| ||||||||||||| ||||    
T  41802998 gcagttaactgccgaagaatttaaaaaccggctgcagttaactgccgaggaaaacctcggtagttaactgccga 41803071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 425 - 498
Target Start/End: Original strand, 46344930 - 46345003
Alignment:
Q  425 cccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaa 498  Q
    |||||| |||||||||||  |||||||||| |||  | |||||||||||| | ||||||||| |||||||||||    
T  46344930 cccctcggcagttaactgtcgaggaattcaaaaatcggctgcagttaactgccgaggaaaacctcggtagttaa 46345003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 505
Target Start/End: Original strand, 9582548 - 9582620
Alignment:
Q  433 cagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    ||||||||||| ||| |||||| |||| |||||||||||||| | ||| |||||||||  |||||||| ||||    
T  9582548 cagttaactgccgagaaattcaaaaaccgactgcagttaactgccgagaaaaacttcgtcagttaactgccga 9582620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 505
Target Start/End: Original strand, 29929427 - 29929499
Alignment:
Q  433 cagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||| ||||||||||| |||| | ||||| |||||| | ||||||||| ||| ||||||||| ||||    
T  29929427 cagttaactgttgaggaattcaaaaaccggctgcaattaactgccgaggaaaacctcgatagttaactgccga 29929499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 433 - 505
Target Start/End: Original strand, 29978581 - 29978653
Alignment:
Q  433 cagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||| ||||||||||| |||| | ||||| |||||| | ||||||||| ||| ||||||||| ||||    
T  29978581 cagttaactgttgaggaattcaaaaaccggctgcaattaactgccgaggaaaacctcgatagttaactgccga 29978653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 465 - 521
Target Start/End: Complemental strand, 40877813 - 40877757
Alignment:
Q  465 gcagttaactactgaggaaaacttcggtagttaactaccgatgatacttcaaacctt 521  Q
    ||||| |||||| |||||||||||||| |||||||| |||| || ||||||||||||    
T  40877813 gcagtaaactaccgaggaaaacttcggcagttaactgccgaggaaacttcaaacctt 40877757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 465 - 505
Target Start/End: Original strand, 41844182 - 41844222
Alignment:
Q  465 gcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||| ||||||||||| ||||||||||||||||||    
T  41844182 gcagttaactgctgaggaaaacctcggtagttaactaccga 41844222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 10478663 - 10478582
Alignment:
Q  9 aggaggtaaaaaagtaataaataaataattcttataataatttcatgcacaat-atattactttgctctaatccataaaatatatc 93  Q
    ||||||||||||||||    |||||||||||| ||||||||||||||| || | ||||||||||||||| ||| |||||| |||||    
T  10478663 aggaggtaaaaaagtat---ataaataattct-ataataatttcatgcccatttatattactttgctcttatctataaaacatatc 10478582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 522
Target Start/End: Original strand, 33471420 - 33471560
Alignment:
Q  380 acacatttgataagattgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactgcagttaactactga 479  Q
    |||||||||| ||| ||||||||  ||| ||||||| ||||||||||| |||||||||  |||   ||| |||||||||  |  ||||||| ||||  ||    
T  33471420 acacatttgagaaggttgagaaattctaataaaatatcaaaatatcccttctgcagtt--ctgtcaaggtattcataaatcggttgcagttgactatcga 33471517  T
Q  480 ggaaaacttcggtagttaactaccgatgatacttcaaacctta 522  Q
    |||||| ||||||| ||||||  ||| || |||||||| ||||    
T  33471518 ggaaaatttcggtaattaactgtcgaggaaacttcaaatctta 33471560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 505
Target Start/End: Original strand, 7941141 - 7941183
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||| |||||||||||||||| |||||||| ||||    
T  7941141 ctgcagttaactgctgaggaaaacttcggcagttaactgccga 7941183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 427 - 505
Target Start/End: Complemental strand, 13896954 - 13896876
Alignment:
Q  427 cctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||| |||||||| |||||| ||||| |  ||||| ||||||||||||   ||||||||| ||||||||||||| ||||    
T  13896954 cctcggcagttaattgctgaagaatttaataactggctgcagttaactgtcgaggaaaacctcggtagttaactgccga 13896876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 505
Target Start/End: Complemental strand, 19988675 - 19988633
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||| |||||||||||||||| ||| |||||||||    
T  19988675 ctgcagttaactgctgaggaaaacttcggcagtaaactaccga 19988633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 505
Target Start/End: Original strand, 27738636 - 27738678
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||| | |||||||||||||||||| |||||||||    
T  27738636 ctgcagttaactgccgaggaaaacttcggtagtaaactaccga 27738678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 434 - 500
Target Start/End: Complemental strand, 30256074 - 30256008
Alignment:
Q  434 agttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaact 500  Q
    |||||||||| |||||||| | |||| | |||||||||||| | ||||||||| ||| |||||||||    
T  30256074 agttaactgccgaggaattaaaaaaccggctgcagttaactgccgaggaaaacctcgatagttaact 30256008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 505
Target Start/End: Complemental strand, 32744194 - 32744152
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||||| |||||||||||||| ||| |||||||||    
T  32744194 ctgcagttaactaccgaggaaaacttcggcagtaaactaccga 32744152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 505
Target Start/End: Complemental strand, 43478872 - 43478830
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||| | ||||||||||||||||||||||| ||||    
T  43478872 ctgcagttaactgccgaggaaaacttcggtagttaactgccga 43478830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 467 - 505
Target Start/End: Original strand, 48566377 - 48566415
Alignment:
Q  467 agttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||| ||||||||||||||||||||||| ||||    
T  48566377 agttaactaccgaggaaaacttcggtagttaactgccga 48566415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 425 - 505
Target Start/End: Complemental strand, 4002585 - 4002505
Alignment:
Q  425 cccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||| |||||||||| ||||||||||   || | | |||||||||||| | ||||||||| |||| |||||||| ||||    
T  4002585 cccctcggcagttaactactgaggaatttgaaatccggctgcagttaactgccgaggaaaacctcgggagttaactgccga 4002505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 422 - 474
Target Start/End: Complemental strand, 45101931 - 45101879
Alignment:
Q  422 tatcccctctgcagttaactgctgaggaattcataaactgactgcagttaact 474  Q
    ||||||||| |||||||| || ||||||||||| |||| | ||||||||||||    
T  45101931 tatcccctcggcagttaattgttgaggaattcaaaaaccggctgcagttaact 45101879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 8640 - 8576
Alignment:
Q  29 ataaataattcttataataatttcatgcacaatatattactttgctctaatccataaaatatatc 93  Q
    |||||||||||||||||||||||||||| || |||||||||||||  | |||||||||| |||||    
T  8640 ataaataattcttataataatttcatgcccattatattactttgcaattatccataaaacatatc 8576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 381 - 484
Target Start/End: Original strand, 232497 - 232600
Alignment:
Q  381 cacatttgataagattgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgag 480  Q
    |||||| |||||| |||||||| ||||||||||||| |   ||||||||| |||||||||||  |||||||| | || | |||||||||||||| | |||    
T  232497 cacattggataaggttgagaaagactagtaaaatacgattttatcccctcggcagttaactgtcgaggaattaaaaatccgactgcagttaactgccgag 232596  T
Q  481 gaaa 484  Q
    ||||    
T  232597 gaaa 232600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 463 - 523
Target Start/End: Complemental strand, 232874 - 232814
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccgatgatacttcaaaccttaa 523  Q
    ||||| |||||| | ||||||||| ||||||||||||| |||| || ||||||||||||||    
T  232874 ctgcaattaactgccgaggaaaacctcggtagttaactgccgaggaaacttcaaaccttaa 232814  T

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Target: scaffold1379 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 505
Target Start/End: Complemental strand, 559 - 434
Alignment:
Q  380 acacatttgataagattgagaaaaactagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactgcagttaactactga 479  Q
    ||||||||||||||| ||||||| || |||||||||| |   |   ||||| |||||||||||| || ||||| |||| | | ||||||||||||   ||    
T  559 acacatttgataagactgagaaacacgagtaaaatacgattttgctccctcggcagttaactgccgaagaattaataatccggctgcagttaactgtcga 460  T
Q  480 ggaaaacttcggtagttaactaccga 505  Q
    ||||||| |||| |||||||||||||    
T  459 ggaaaacctcgggagttaactaccga 434  T

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Target: scaffold0618 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 498
Target Start/End: Original strand, 3877 - 3951
Alignment:
Q  424 tcccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaa 498  Q
    ||||||| |||||||||||  |||||||||| |||  | |||||||||||| | ||||||||| |||||||||||    
T  3877 tcccctcggcagttaactgtcgaggaattcaaaaatcggctgcagttaactgccgaggaaaacctcggtagttaa 3951  T

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Target: scaffold0016 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 463 - 505
Target Start/End: Original strand, 68409 - 68451
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||||| |||||||||||||||||| |||||||||    
T  68409 ctgcagttaactaccgaggaaaacttcggtagtaaactaccga 68451  T

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Target: scaffold0794 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0794
Description:

Target: scaffold0794; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 505
Target Start/End: Original strand, 5302 - 5344
Alignment:
Q  463 ctgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    |||||||||||||| ||||||||| ||||||||||||| ||||    
T  5302 ctgcagttaactaccgaggaaaacctcggtagttaactgccga 5344  T

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Target: scaffold0169 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 440 - 486
Target Start/End: Complemental strand, 1722 - 1676
Alignment:
Q  440 ctgctgaggaattcataaactgactgcagttaactactgaggaaaac 486  Q
    |||| |||||||||| |||| |||||||||||||| |||||||||||    
T  1722 ctgccgaggaattcaaaaaccgactgcagttaactgctgaggaaaac 1676  T

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Target: scaffold0341 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 505
Target Start/End: Complemental strand, 17452 - 17351
Alignment:
Q  404 actagtaaaataccaaaatatcccctctgcagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactacc 503  Q
    ||||||||||||| |   || |||||| |||||||||||| ||||||||   || | | |||||||||||| | ||||||| | ||||||||||||| ||    
T  17452 actagtaaaatacgattttaccccctcggcagttaactgccgaggaatttgaaatccggctgcagttaactgccgaggaaatcctcggtagttaactgcc 17353  T
Q  504 ga 505  Q
    ||    
T  17352 ga 17351  T

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Target: scaffold0388 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 432 - 480
Target Start/End: Complemental strand, 11783 - 11735
Alignment:
Q  432 gcagttaactgctgaggaattcataaactgactgcagttaactactgag 480  Q
    ||||||||||||||| ||||||| |||| | |||||||||||| |||||    
T  11783 gcagttaactgctgaagaattcaaaaaccggctgcagttaactgctgag 11735  T

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Target: scaffold0360 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 433 - 505
Target Start/End: Complemental strand, 7376 - 7304
Alignment:
Q  433 cagttaactgctgaggaattcataaactgactgcagttaactactgaggaaaacttcggtagttaactaccga 505  Q
    ||||||| |||||||||||||| |||| | ||||| | |||| | ||| ||||| ||||||||||||| ||||    
T  7376 cagttaattgctgaggaattcaaaaaccggctgcaatcaactgccgagaaaaacctcggtagttaactgccga 7304  T

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