View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11745_low_48 (Length: 466)

Name: NF11745_low_48
Description: NF11745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11745_low_48
NF11745_low_48
[»] chr1 (58 HSPs)
chr1 (1-128)||(5489841-5489968)
chr1 (1-128)||(48498870-48498997)
chr1 (1-128)||(43570994-43571121)
chr1 (1-130)||(7447890-7448019)
chr1 (1-129)||(4401393-4401521)
chr1 (1-130)||(24769405-24769534)
chr1 (5-129)||(50448167-50448291)
chr1 (1-130)||(750211-750340)
chr1 (1-129)||(2497469-2497597)
chr1 (1-127)||(37814843-37814969)
chr1 (1-128)||(23989431-23989558)
chr1 (1-129)||(4888108-4888235)
chr1 (424-466)||(7342985-7343027)
chr1 (424-466)||(51868421-51868463)
chr1 (425-466)||(3871670-3871711)
chr1 (425-466)||(11709484-11709525)
chr1 (425-466)||(45805606-45805647)
chr1 (424-466)||(11454200-11454242)
chr1 (424-466)||(20266565-20266607)
chr1 (424-466)||(25406060-25406102)
chr1 (424-466)||(30879338-30879380)
chr1 (424-466)||(33291194-33291236)
chr1 (424-466)||(35584399-35584441)
chr1 (424-466)||(48217700-48217742)
chr1 (424-466)||(50148633-50148675)
chr1 (424-466)||(50165875-50165917)
chr1 (427-466)||(19723576-19723615)
chr1 (424-466)||(9172753-9172795)
chr1 (424-466)||(9180735-9180777)
chr1 (424-466)||(9686981-9687023)
chr1 (424-466)||(9919650-9919691)
chr1 (424-466)||(19715671-19715713)
chr1 (424-466)||(32676911-32676953)
chr1 (424-466)||(34519391-34519433)
chr1 (56-130)||(35003414-35003488)
chr1 (56-130)||(44112797-44112871)
chr1 (424-466)||(51872126-51872168)
chr1 (431-464)||(40646938-40646971)
chr1 (426-466)||(23289187-23289227)
chr1 (424-464)||(31837099-31837139)
chr1 (56-128)||(45705945-45706017)
chr1 (424-466)||(5324335-5324377)
chr1 (424-466)||(14545738-14545780)
chr1 (424-466)||(21687635-21687677)
chr1 (424-466)||(27914883-27914925)
chr1 (424-466)||(28035400-28035441)
chr1 (424-466)||(34878071-34878113)
chr1 (424-466)||(41081480-41081522)
chr1 (424-466)||(44637680-44637722)
chr1 (424-454)||(44915908-44915938)
chr1 (56-122)||(48119748-48119814)
chr1 (424-466)||(50271916-50271958)
chr1 (425-466)||(24583206-24583247)
chr1 (425-466)||(24583402-24583443)
chr1 (425-457)||(18569088-18569120)
chr1 (426-466)||(21947413-21947453)
chr1 (56-128)||(35000021-35000093)
chr1 (56-128)||(45639640-45639712)
[»] chr3 (51 HSPs)
chr3 (1-129)||(46941118-46941246)
chr3 (1-128)||(24688310-24688437)
chr3 (1-128)||(40808930-40809057)
chr3 (1-130)||(36150195-36150324)
chr3 (1-130)||(42394325-42394454)
chr3 (5-130)||(54246054-54246179)
chr3 (1-128)||(40480814-40480941)
chr3 (1-128)||(53581766-53581893)
chr3 (1-128)||(54237161-54237288)
chr3 (1-130)||(47190932-47191061)
chr3 (5-129)||(52629897-52630021)
chr3 (5-129)||(25413750-25413874)
chr3 (1-128)||(42100753-42100880)
chr3 (1-128)||(45126836-45126963)
chr3 (30-130)||(1078312-1078412)
chr3 (1-130)||(53273599-53273719)
chr3 (1-128)||(27748628-27748746)
chr3 (1-75)||(51249373-51249447)
chr3 (38-130)||(29556865-29556956)
chr3 (424-466)||(12116354-12116396)
chr3 (424-466)||(25631302-25631344)
chr3 (424-466)||(36906378-36906420)
chr3 (424-463)||(46934898-46934937)
chr3 (424-466)||(2342704-2342746)
chr3 (424-466)||(3848695-3848737)
chr3 (424-466)||(4178821-4178863)
chr3 (424-466)||(25162692-25162734)
chr3 (424-466)||(32607725-32607767)
chr3 (424-466)||(35498976-35499018)
chr3 (49-118)||(19148881-19148950)
chr3 (425-466)||(38440368-38440409)
chr3 (424-465)||(38854815-38854856)
chr3 (56-128)||(9434244-9434316)
chr3 (424-466)||(44907175-44907217)
chr3 (424-466)||(50611194-50611236)
chr3 (424-466)||(51202040-51202082)
chr3 (424-466)||(9998720-9998762)
chr3 (424-466)||(10108489-10108531)
chr3 (424-466)||(10233323-10233365)
chr3 (424-466)||(17238061-17238103)
chr3 (424-466)||(21533602-21533644)
chr3 (424-466)||(29503717-29503759)
chr3 (424-466)||(30648495-30648537)
chr3 (424-466)||(36910559-36910601)
chr3 (424-466)||(47041841-47041883)
chr3 (424-466)||(48650527-48650569)
chr3 (424-457)||(10229738-10229771)
chr3 (10-103)||(11064655-11064748)
chr3 (89-130)||(40488173-40488214)
chr3 (426-454)||(4822070-4822098)
chr3 (56-128)||(51757713-51757784)
[»] chr2 (67 HSPs)
chr2 (1-132)||(30838697-30838828)
chr2 (1-127)||(42849768-42849893)
chr2 (1-130)||(19047222-19047351)
chr2 (1-129)||(4764633-4764761)
chr2 (1-128)||(43335671-43335798)
chr2 (1-130)||(43490307-43490436)
chr2 (5-128)||(1750483-1750606)
chr2 (5-129)||(12302160-12302284)
chr2 (1-128)||(16096812-16096940)
chr2 (1-130)||(34817682-34817811)
chr2 (1-129)||(39149201-39149327)
chr2 (1-95)||(13780676-13780770)
chr2 (1-123)||(42026834-42026956)
chr2 (424-466)||(8806129-8806171)
chr2 (424-466)||(41431291-41431333)
chr2 (425-466)||(30420932-30420973)
chr2 (424-465)||(32678899-32678940)
chr2 (424-464)||(3268611-3268651)
chr2 (426-466)||(7558715-7558755)
chr2 (424-464)||(33228764-33228804)
chr2 (424-466)||(4193100-4193142)
chr2 (424-466)||(4228386-4228428)
chr2 (1-75)||(8896544-8896618)
chr2 (424-466)||(20046858-20046900)
chr2 (424-466)||(21570184-21570226)
chr2 (424-466)||(25087298-25087340)
chr2 (424-466)||(31580431-31580473)
chr2 (424-466)||(32913491-32913533)
chr2 (56-130)||(34895647-34895721)
chr2 (424-466)||(36234261-36234303)
chr2 (425-466)||(38575263-38575304)
chr2 (425-466)||(45128455-45128496)
chr2 (56-128)||(11825562-11825634)
chr2 (424-464)||(22421993-22422033)
chr2 (424-464)||(27248927-27248967)
chr2 (424-463)||(2808249-2808288)
chr2 (424-466)||(83957-83999)
chr2 (424-466)||(1415821-1415863)
chr2 (424-466)||(3725443-3725485)
chr2 (56-130)||(6518400-6518474)
chr2 (424-466)||(7015487-7015529)
chr2 (424-466)||(8971404-8971446)
chr2 (424-466)||(9986118-9986160)
chr2 (56-130)||(12531569-12531643)
chr2 (56-130)||(18491825-18491899)
chr2 (424-466)||(34600477-34600519)
chr2 (56-130)||(41281880-41281954)
chr2 (424-457)||(4041388-4041421)
chr2 (425-466)||(40625834-40625875)
chr2 (56-128)||(966742-966814)
chr2 (424-464)||(12236834-12236874)
chr2 (425-457)||(17248943-17248975)
chr2 (424-464)||(26025272-26025312)
chr2 (56-128)||(43114677-43114749)
chr2 (424-454)||(12553963-12553993)
chr2 (424-466)||(33923969-33924011)
chr2 (424-454)||(36175306-36175336)
chr2 (424-457)||(459052-459085)
chr2 (425-466)||(4100594-4100635)
chr2 (425-466)||(12677246-12677287)
chr2 (426-466)||(8308358-8308398)
chr2 (64-128)||(12415368-12415432)
chr2 (64-128)||(12427428-12427492)
chr2 (56-128)||(16804088-16804160)
chr2 (56-128)||(16843370-16843442)
chr2 (425-457)||(28037357-28037389)
chr2 (424-460)||(33759978-33760014)
[»] chr8 (48 HSPs)
chr8 (5-128)||(2547065-2547188)
chr8 (1-129)||(36743390-36743518)
chr8 (1-123)||(29705427-29705549)
chr8 (1-127)||(42197344-42197470)
chr8 (1-130)||(20148825-20148954)
chr8 (1-128)||(31384729-31384856)
chr8 (1-130)||(30660648-30660777)
chr8 (1-130)||(30912468-30912597)
chr8 (1-129)||(11582831-11582959)
chr8 (5-128)||(9241621-9241744)
chr8 (1-122)||(29800864-29800985)
chr8 (1-124)||(2165875-2165998)
chr8 (1-127)||(26125700-26125825)
chr8 (5-129)||(45397385-45397508)
chr8 (1-128)||(3743836-3743963)
chr8 (1-105)||(5754968-5755072)
chr8 (1-128)||(42295260-42295386)
chr8 (1-130)||(1375607-1375736)
chr8 (13-128)||(40528542-40528657)
chr8 (424-466)||(4809230-4809272)
chr8 (424-466)||(9072984-9073026)
chr8 (424-466)||(29777485-29777527)
chr8 (424-466)||(9498375-9498417)
chr8 (424-466)||(14906699-14906741)
chr8 (424-466)||(33896352-33896394)
chr8 (424-466)||(34612070-34612112)
chr8 (424-466)||(44578296-44578338)
chr8 (431-466)||(11267274-11267309)
chr8 (424-466)||(19876464-19876506)
chr8 (424-466)||(23851270-23851312)
chr8 (56-130)||(34304908-34304981)
chr8 (431-464)||(43135367-43135400)
chr8 (56-128)||(10678060-10678132)
chr8 (56-128)||(33629901-33629973)
chr8 (431-466)||(11725946-11725981)
chr8 (427-466)||(37565658-37565697)
chr8 (424-466)||(1236489-1236531)
chr8 (424-466)||(9619133-9619175)
chr8 (424-466)||(30568112-30568154)
chr8 (424-454)||(34680664-34680694)
chr8 (424-466)||(43889900-43889942)
chr8 (424-466)||(44099712-44099754)
chr8 (424-457)||(12654338-12654371)
chr8 (56-101)||(18066653-18066698)
chr8 (425-466)||(32724258-32724299)
chr8 (56-129)||(35181636-35181709)
chr8 (424-457)||(39152918-39152951)
chr8 (424-464)||(8412313-8412353)
[»] chr4 (62 HSPs)
chr4 (1-128)||(33703206-33703333)
chr4 (1-130)||(28982728-28982857)
chr4 (1-128)||(35017797-35017924)
chr4 (1-130)||(43735807-43735936)
chr4 (1-130)||(1771172-1771301)
chr4 (1-130)||(27550374-27550503)
chr4 (1-128)||(25051758-25051885)
chr4 (5-129)||(23036049-23036173)
chr4 (1-128)||(43514594-43514721)
chr4 (1-128)||(27893750-27893877)
chr4 (1-128)||(43949709-43949836)
chr4 (1-130)||(55966252-55966381)
chr4 (1-129)||(31680967-31681095)
chr4 (1-130)||(27864629-27864758)
chr4 (5-128)||(23204686-23204809)
chr4 (1-128)||(51512173-51512300)
chr4 (1-128)||(12497021-12497148)
chr4 (1-129)||(27316619-27316748)
chr4 (1-110)||(39631166-39631275)
chr4 (5-122)||(45490227-45490344)
chr4 (1-122)||(48463364-48463485)
chr4 (5-130)||(21687075-21687200)
chr4 (1-116)||(46412389-46412504)
chr4 (1-97)||(41878471-41878567)
chr4 (1-122)||(41848036-41848157)
chr4 (1-101)||(41327478-41327578)
chr4 (1-130)||(28988538-28988666)
chr4 (13-129)||(56215805-56215920)
chr4 (424-466)||(4644129-4644171)
chr4 (424-466)||(10389530-10389572)
chr4 (424-465)||(1532180-1532221)
chr4 (424-466)||(2115364-2115406)
chr4 (424-466)||(9284182-9284224)
chr4 (424-466)||(9528653-9528695)
chr4 (424-466)||(20569528-20569570)
chr4 (424-466)||(25274154-25274196)
chr4 (424-466)||(43444663-43444705)
chr4 (424-466)||(51318256-51318298)
chr4 (424-466)||(53616426-53616468)
chr4 (56-129)||(19880074-19880147)
chr4 (425-466)||(45227818-45227859)
chr4 (56-128)||(55272284-55272356)
chr4 (431-466)||(34024221-34024256)
chr4 (424-466)||(8670753-8670795)
chr4 (424-466)||(10359325-10359367)
chr4 (424-466)||(38706486-38706528)
chr4 (424-462)||(56199371-56199409)
chr4 (424-464)||(868436-868476)
chr4 (426-466)||(50766290-50766330)
chr4 (56-127)||(35037125-35037195)
chr4 (56-122)||(712080-712146)
chr4 (424-466)||(9645300-9645342)
chr4 (424-466)||(13634389-13634431)
chr4 (56-130)||(17619058-17619132)
chr4 (424-466)||(31381492-31381534)
chr4 (424-454)||(36162008-36162038)
chr4 (424-466)||(44947683-44947725)
chr4 (424-466)||(49680801-49680843)
chr4 (56-129)||(3756159-3756232)
chr4 (90-130)||(32728511-32728551)
chr4 (426-466)||(46990909-46990949)
chr4 (56-128)||(48435487-48435559)
[»] chr6 (46 HSPs)
chr6 (1-130)||(21279994-21280123)
chr6 (1-130)||(7367614-7367743)
chr6 (1-128)||(24203895-24204022)
chr6 (1-130)||(7273241-7273370)
chr6 (1-122)||(7292812-7292933)
chr6 (1-130)||(9698239-9698368)
chr6 (1-128)||(30736047-30736174)
chr6 (1-130)||(3213465-3213594)
chr6 (1-122)||(26669923-26670044)
chr6 (1-129)||(21293584-21293712)
chr6 (1-127)||(13743130-13743256)
chr6 (1-127)||(13748630-13748756)
chr6 (1-127)||(30014408-30014534)
chr6 (1-131)||(26466864-26466994)
chr6 (282-391)||(31976431-31976540)
chr6 (424-466)||(4984343-4984385)
chr6 (424-466)||(25064495-25064537)
chr6 (424-466)||(8497227-8497269)
chr6 (424-466)||(23947093-23947135)
chr6 (56-130)||(27441662-27441736)
chr6 (425-466)||(7880879-7880920)
chr6 (424-464)||(7028116-7028156)
chr6 (56-128)||(33242523-33242595)
chr6 (431-466)||(8027901-8027936)
chr6 (424-459)||(12168944-12168979)
chr6 (431-466)||(17237069-17237104)
chr6 (266-372)||(31984465-31984572)
chr6 (424-466)||(12653203-12653245)
chr6 (424-466)||(16419417-16419459)
chr6 (424-466)||(35001849-35001891)
chr6 (424-457)||(1450529-1450562)
chr6 (425-466)||(7875821-7875862)
chr6 (424-464)||(4088721-4088761)
chr6 (424-464)||(12059549-12059589)
chr6 (426-466)||(17335012-17335052)
chr6 (425-464)||(20619682-20619721)
chr6 (129-160)||(31975953-31975984)
chr6 (424-466)||(606459-606501)
chr6 (424-466)||(3913367-3913409)
chr6 (424-466)||(4468811-4468853)
chr6 (424-462)||(10228945-10228982)
chr6 (424-454)||(34185487-34185517)
chr6 (437-466)||(8196196-8196225)
chr6 (56-129)||(33254034-33254107)
chr6 (425-466)||(34489460-34489501)
chr6 (425-457)||(30894862-30894894)
[»] chr7 (53 HSPs)
chr7 (1-122)||(5015460-5015581)
chr7 (1-130)||(16180263-16180392)
chr7 (1-130)||(5810830-5810959)
chr7 (1-130)||(44326243-44326372)
chr7 (1-129)||(42972917-42973045)
chr7 (1-129)||(44416841-44416969)
chr7 (1-128)||(32029725-32029852)
chr7 (1-128)||(43343532-43343659)
chr7 (1-129)||(24000919-24001047)
chr7 (1-128)||(42538339-42538466)
chr7 (5-125)||(27393171-27393291)
chr7 (1-128)||(26898310-26898437)
chr7 (1-128)||(41861741-41861868)
chr7 (1-130)||(35069786-35069915)
chr7 (1-130)||(45326085-45326214)
chr7 (1-132)||(9216366-9216497)
chr7 (5-110)||(38160505-38160610)
chr7 (1-129)||(4638106-4638234)
chr7 (1-128)||(10573814-10573941)
chr7 (16-130)||(47279630-47279744)
chr7 (1-128)||(43317508-43317635)
chr7 (1-75)||(24280557-24280631)
chr7 (424-466)||(1485032-1485074)
chr7 (424-466)||(433467-433509)
chr7 (424-466)||(2843017-2843059)
chr7 (1-103)||(5194164-5194266)
chr7 (424-466)||(14627674-14627716)
chr7 (424-466)||(26492624-26492666)
chr7 (424-466)||(26583969-26584011)
chr7 (56-130)||(31408539-31408613)
chr7 (424-466)||(34773970-34774012)
chr7 (424-466)||(42066838-42066880)
chr7 (424-466)||(45198809-45198851)
chr7 (425-466)||(22927647-22927688)
chr7 (56-129)||(40237039-40237112)
chr7 (424-464)||(12502028-12502068)
chr7 (424-464)||(12527662-12527702)
chr7 (424-463)||(19560258-19560297)
chr7 (431-466)||(20116840-20116875)
chr7 (424-466)||(23085780-23085822)
chr7 (424-466)||(32684927-32684969)
chr7 (424-466)||(35495951-35495993)
chr7 (424-466)||(46822274-46822316)
chr7 (433-466)||(7640560-7640593)
chr7 (424-461)||(21266656-21266693)
chr7 (425-466)||(42311537-42311578)
chr7 (424-464)||(1448608-1448648)
chr7 (425-457)||(37849107-37849139)
chr7 (424-466)||(23425149-23425191)
chr7 (424-454)||(24610052-24610082)
chr7 (424-466)||(32521705-32521747)
chr7 (424-464)||(6559138-6559178)
chr7 (425-461)||(35667009-35667045)
[»] chr5 (44 HSPs)
chr5 (1-130)||(7617198-7617327)
chr5 (5-128)||(18034051-18034174)
chr5 (1-128)||(41334571-41334698)
chr5 (5-129)||(33801538-33801662)
chr5 (1-129)||(2614556-2614684)
chr5 (1-129)||(5257060-5257188)
chr5 (1-103)||(22512370-22512472)
chr5 (30-130)||(25914902-25915002)
chr5 (1-122)||(38470644-38470765)
chr5 (23-130)||(39122262-39122369)
chr5 (1-103)||(39122366-39122468)
chr5 (424-466)||(7242045-7242087)
chr5 (424-466)||(7247220-7247262)
chr5 (424-466)||(10649903-10649945)
chr5 (424-466)||(19280713-19280755)
chr5 (424-464)||(7150111-7150151)
chr5 (426-466)||(8771959-8771999)
chr5 (424-466)||(781649-781691)
chr5 (424-466)||(18677242-18677284)
chr5 (424-466)||(21060059-21060101)
chr5 (424-466)||(34881978-34882020)
chr5 (425-466)||(35475115-35475156)
chr5 (56-128)||(30622627-30622699)
chr5 (424-464)||(43148990-43149030)
chr5 (56-127)||(32473303-32473374)
chr5 (424-466)||(3271178-3271220)
chr5 (424-466)||(4954253-4954295)
chr5 (424-466)||(16981553-16981595)
chr5 (432-466)||(27752186-27752220)
chr5 (424-466)||(30371882-30371924)
chr5 (424-466)||(41184217-41184259)
chr5 (424-466)||(43008091-43008133)
chr5 (424-457)||(36057104-36057137)
chr5 (424-464)||(30299107-30299147)
chr5 (424-455)||(2057610-2057641)
chr5 (424-454)||(11073781-11073811)
chr5 (424-466)||(14726254-14726296)
chr5 (424-466)||(19259588-19259630)
chr5 (424-466)||(27266635-27266677)
chr5 (424-466)||(38007610-38007652)
chr5 (424-457)||(26825692-26825725)
chr5 (437-466)||(42580149-42580178)
chr5 (424-464)||(35851052-35851092)
chr5 (425-461)||(43261649-43261685)
[»] scaffold0038 (1 HSPs)
scaffold0038 (1-130)||(112720-112849)
[»] scaffold0385 (1 HSPs)
scaffold0385 (1-128)||(11316-11443)
[»] scaffold0187 (2 HSPs)
scaffold0187 (5-128)||(14097-14219)
scaffold0187 (5-128)||(24425-24547)
[»] scaffold0119 (1 HSPs)
scaffold0119 (1-122)||(750-871)
[»] scaffold0157 (1 HSPs)
scaffold0157 (1-128)||(23329-23456)
[»] scaffold0003 (2 HSPs)
scaffold0003 (56-130)||(45625-45699)
scaffold0003 (424-466)||(361575-361617)
[»] scaffold0311 (1 HSPs)
scaffold0311 (431-466)||(8950-8985)
[»] scaffold0022 (1 HSPs)
scaffold0022 (424-466)||(83213-83255)
[»] scaffold0014 (1 HSPs)
scaffold0014 (424-466)||(201149-201191)
[»] scaffold0426 (1 HSPs)
scaffold0426 (425-466)||(6541-6582)
[»] scaffold0495 (1 HSPs)
scaffold0495 (424-462)||(5664-5701)
[»] scaffold0146 (1 HSPs)
scaffold0146 (424-466)||(16096-16138)
[»] scaffold0039 (1 HSPs)
scaffold0039 (424-454)||(93383-93413)
[»] scaffold0443 (1 HSPs)
scaffold0443 (429-466)||(4464-4501)
[»] scaffold0049 (1 HSPs)
scaffold0049 (424-452)||(71093-71121)


Alignment Details
Target: chr1 (Bit Score: 116; Significance: 8e-59; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 5489841 - 5489968
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  5489841 tttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttatgtgggtgtaaagggtgtattgcc 5489940  T
Q  101 acatggggtggtacatgtatcatcactc 128  Q
    ||||||||||||||||||||||||||||    
T  5489941 acatggggtggtacatgtatcatcactc 5489968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 48498997 - 48498870
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  48498997 tttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttatgtgggtgtaaagggtgtattgcc 48498898  T
Q  101 acatggggtggtacatgtatcatcactc 128  Q
    ||||||||||||||||||||||||||||    
T  48498897 acatggggtggtacatgtatcatcactc 48498870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 43571121 - 43570994
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  43571121 tttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttatgtgggtgtaaagggtgtattgcc 43571022  T
Q  101 acatggggtggtacatgtatcatcactc 128  Q
    |||||||||||||||| |||||||||||    
T  43571021 acatggggtggtacatatatcatcactc 43570994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 7447890 - 7448019
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||| |||||||||||    
T  7447890 tttgataagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgcc 7447989  T
Q  101 acatggggtggtacatgtatcatcactctt 130  Q
    ||||||  ||||||||||||||||||||||    
T  7447990 acatggaatggtacatgtatcatcactctt 7448019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 4401393 - 4401521
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||| ||| |||||||| |||||||||||    
T  4401393 tttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaatatgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgcc 4401492  T
Q  101 acatggggtggtacatgtatcatcactct 129  Q
    |||| ||||||||||||||||||||||||    
T  4401493 acatagggtggtacatgtatcatcactct 4401521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 24769534 - 24769405
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| | ||||||  ||||||||||    
T  24769534 tttggtaagttcttatcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtggatgtaaagagtgtattgcc 24769435  T
Q  101 acatggggtggtacatgtatcatcactctt 130  Q
    ||||||||||||||||||||||||||||||    
T  24769434 acatggggtggtacatgtatcatcactctt 24769405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 50448291 - 50448167
Alignment:
Q  5 gtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacat 104  Q
    |||||||||||| ||||||||| |||||||||||||| |||||| |||| ||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  50448291 gtaagttcatcttacaaccacattttatcttctatttttgtgggttccatgttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacat 50448192  T
Q  105 ggggtggtacatgtatcatcactct 129  Q
    |||||||||||||||||||||||||    
T  50448191 ggggtggtacatgtatcatcactct 50448167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 750340 - 750211
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||| ||| ||||||||| ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||| ||| |||||||| |||||||||||    
T  750340 tttgataaattcatctcaaaaccacactttatcttctatttgtgtggggtccatgttaccacgtgtcagaattttgtgtgggtgtaaagggtgtattgcc 750241  T
Q  101 acatggggtggtacatgtatcatcactctt 130  Q
    ||||||| ||||||||||||||||||||||    
T  750240 acatgggatggtacatgtatcatcactctt 750211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 2497597 - 2497469
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||  ||| |||||||||||||||||||| ||| |||| |||||||||||    
T  2497597 tttggtaagttcatctcacaaccacactttatcatctatttatgtgggatccagattgtcacgtgtcagaattttatgtgggtataaagggtgtattgcc 2497498  T
Q  101 acatggggtggtacatgtatcatcactct 129  Q
    |||||| ||||||||||||||| ||||||    
T  2497497 acatggtgtggtacatgtatcaccactct 2497469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 37814843 - 37814969
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||| ||||| |||||||||||||||||||||||||| |||||| ||||  |||||||||||||||||||||| | | |||||| |||||||||||    
T  37814843 tttggtaaattcatttcacaaccacactttatcttctatttatgtggggtccagattgccacgtgtcagaattttatatggatgtaaagggtgtattgcc 37814942  T
Q  101 acatggggtggtacatgtatcatcact 127  Q
    |||||||||||||||||||||| ||||    
T  37814943 acatggggtggtacatgtatcaccact 37814969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 23989558 - 23989431
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||| || |||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||| || ||| |||||||| |||||||||||    
T  23989558 tttggtaaatttatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaatcttgtgtgggtgtaaagggtgtattgcc 23989459  T
Q  101 acatggggtggtacatgtatcatcactc 128  Q
    | || ||||||||||||||||| |||||    
T  23989458 atatagggtggtacatgtatcaccactc 23989431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 4888108 - 4888235
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||  ||||| |||||| || |||||||||| ||| | |||||| | | |||||||    
T  4888108 tttggtaagtttatctcacaaccacactttattttctatttgtgtggtgtccaaattgccatgtatcagaattttgtgtggatgtaaaggatatattgcc 4888207  T
Q  101 acatggggtggtacatgtatcatcactct 129  Q
    |||| ||||||||||||||||||||||||    
T  4888208 acat-gggtggtacatgtatcatcactct 4888235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 7343027 - 7342985
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  7343027 caaaaataaaatgatattcattcattcaaatcgagagattaca 7342985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 51868421 - 51868463
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  51868421 caaaaataaaatgatattcattcattcaaatcgagagattaca 51868463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 425 - 466
Target Start/End: Complemental strand, 3871711 - 3871670
Alignment:
Q  425 aaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  3871711 aaaaataaaatgatattcattcattcaaatcgagagattaca 3871670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 425 - 466
Target Start/End: Original strand, 11709484 - 11709525
Alignment:
Q  425 aaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  11709484 aaaaataaaatgatattcattcattcaaatcgagagattaca 11709525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 425 - 466
Target Start/End: Original strand, 45805606 - 45805647
Alignment:
Q  425 aaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  45805606 aaaaataaaatgatattcattcattcaaatcgagagattaca 45805647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 11454242 - 11454200
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  11454242 caaaaataaaatgatatttattcattcaaatcgagagattaca 11454200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 20266607 - 20266565
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  20266607 caaaaacaaaatgatattcattcattcaaatcgagagattaca 20266565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 25406060 - 25406102
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  25406060 caaaaataaaatgatattcattcattcaaatcgagatattaca 25406102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 30879380 - 30879338
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  30879380 caaaaacaaaatgatattcattcattcaaatcgagagattaca 30879338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 33291194 - 33291236
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  33291194 caaaaataaaatgatattcattcatttaaatcgagagattaca 33291236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 35584399 - 35584441
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  35584399 caaaaacaaaatgatattcattcattcaaatcgagagattaca 35584441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 48217742 - 48217700
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  48217742 caaaaacaaaatgatattcattcattcaaatcgagagattaca 48217700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 50148675 - 50148633
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  50148675 caaaaataaaatgatattctttcattcaaatcgagagattaca 50148633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 50165875 - 50165917
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  50165875 caaaaataaaatgatattcattcatttaaatcgagagattaca 50165917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 427 - 466
Target Start/End: Complemental strand, 19723615 - 19723576
Alignment:
Q  427 aaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  19723615 aaataaaattatattcattcattcaaatcgagagattaca 19723576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 9172795 - 9172753
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||||||||| ||||||||||||||||||| |||||||||||    
T  9172795 caaaaataaaaagatattcattcattcaaattgagagattaca 9172753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 9180777 - 9180735
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||||||||| ||||||||||||||||||| |||||||||||    
T  9180777 caaaaataaaaagatattcattcattcaaattgagagattaca 9180735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 9686981 - 9687023
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||||| ||||||    
T  9686981 caaaaacaaaatgatattcattcattcaaatcgagatattaca 9687023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 9919691 - 9919650
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  9919691 caaaaataaaatgatattcatt-attcaaatcgagagattaca 9919650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 19715671 - 19715713
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||||||||||||||||| |||| |||||||||||    
T  19715671 caaaaataaaatgatattcattcatttaaattgagagattaca 19715713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 32676911 - 32676953
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||||||||| ||||||||||||| ||||||||||    
T  32676911 caaaaataaaatgatatttattcattcaaatcaagagattaca 32676953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 34519433 - 34519391
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| |||||||||||||||||||||||||||| |||||||    
T  34519433 caaaaacaaaatgatattcattcattcaaatcgagggattaca 34519391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 35003414 - 35003488
Alignment:
Q  56 ttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgtatcatcactctt 130  Q
    ||||||| |||||| ||||| ||| |||||||  |||||||||||||||||||  || ||||||||| |||||||    
T  35003414 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatgggggtgtgcatgtatcaccactctt 35003488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 44112797 - 44112871
Alignment:
Q  56 ttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgtatcatcactctt 130  Q
    ||||||| |||||||||||| ||| |||||||  ||||||||||||||||  |  |||||||||||| |||||||    
T  44112797 ttgccacatgtcagaattttgtgtgggtgtaagaggtgtattgccacatgaaggtgtacatgtatcaccactctt 44112871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 51872168 - 51872126
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||| |||||||||||||||||||||| |||||||||||    
T  51872168 caaaaatagaatgatattcattcattcaaattgagagattaca 51872126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 431 - 464
Target Start/End: Complemental strand, 40646971 - 40646938
Alignment:
Q  431 aaaatgatattcattcattcaaatcgagagatta 464  Q
    ||||||||||||||||||||||||||||||||||    
T  40646971 aaaatgatattcattcattcaaatcgagagatta 40646938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 426 - 466
Target Start/End: Original strand, 23289187 - 23289227
Alignment:
Q  426 aaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||||||| |||||||||||||||||||||| ||||||||    
T  23289187 aaaataaaacgatattcattcattcaaatcgatagattaca 23289227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 424 - 464
Target Start/End: Complemental strand, 31837139 - 31837099
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagatta 464  Q
    |||||| ||||||||||||||||||| ||||||||||||||    
T  31837139 caaaaacaaaatgatattcattcatttaaatcgagagatta 31837099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 45705945 - 45706017
Alignment:
Q  56 ttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgtatcatcactc 128  Q
    ||||||| |||||| ||||| ||| |||||||  ||||||||||||||||| |  |||||||||||| |||||    
T  45705945 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatggaggtgtacatgtatcaccactc 45706017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 5324335 - 5324377
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| |||||| |||||||||||| ||||||||||||||||    
T  5324335 caaaaacaaaatgttattcattcatttaaatcgagagattaca 5324377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 14545780 - 14545738
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| |||||||||||||||| ||||||| |||||||||||    
T  14545780 caaaaacaaaatgatattcattcgttcaaatagagagattaca 14545738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 21687677 - 21687635
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| |||| |||||||||||||||||||||| ||||||||    
T  21687677 caaaaacaaaacgatattcattcattcaaatcgatagattaca 21687635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 27914883 - 27914925
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||    
T  27914883 caaaaacaaaatgatattcattcattcaaatcaagatattaca 27914925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 28035441 - 28035400
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||||||||||||||||||||||||| ||| |||||||||||    
T  28035441 caaaaataaaatgatattcattcattc-aattgagagattaca 28035400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 34878071 - 34878113
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| |||| |||||||||||||||||||||| ||||||||    
T  34878071 caaaaacaaaacgatattcattcattcaaatcgatagattaca 34878113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 41081480 - 41081522
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||| ||| ||||    
T  41081480 caaaaacaaaatgatattcattcattcaaatcgatagagtaca 41081522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 44637722 - 44637680
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||||||||||||||||||||||||| |||||| ||| ||||    
T  44637722 caaaaataaaatgatattcattcattccaatcgatagagtaca 44637680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 454
Target Start/End: Complemental strand, 44915938 - 44915908
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaat 454  Q
    |||||||||||||||||||||||||||||||    
T  44915938 caaaaataaaatgatattcattcattcaaat 44915908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 122
Target Start/End: Original strand, 48119748 - 48119814
Alignment:
Q  56 ttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgtatca 122  Q
    ||||||| |||||| ||||| ||| |||||||  ||||||||||||| |||||  ||||||||||||    
T  48119748 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacgtgggggtgtacatgtatca 48119814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 50271916 - 50271958
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||| ||||| ||||||||||||||||| ||||||    
T  50271916 caaaaataaaataatatttattcattcaaatcgagatattaca 50271958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 466
Target Start/End: Complemental strand, 24583247 - 24583206
Alignment:
Q  425 aaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||| ||||||||||||||||||||||||||| ||| ||||    
T  24583247 aaaaacaaaatgatattcattcattcaaatcgatagaataca 24583206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 466
Target Start/End: Complemental strand, 24583443 - 24583402
Alignment:
Q  425 aaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||| ||||||||||||||||||||||||||| ||| ||||    
T  24583443 aaaaacaaaatgatattcattcattcaaatcgatagaataca 24583402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 425 - 457
Target Start/End: Original strand, 18569088 - 18569120
Alignment:
Q  425 aaaaataaaatgatattcattcattcaaatcga 457  Q
    ||||| |||||||||||||||||||||||||||    
T  18569088 aaaaacaaaatgatattcattcattcaaatcga 18569120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 426 - 466
Target Start/End: Original strand, 21947413 - 21947453
Alignment:
Q  426 aaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||||||| |||||||||||||||||||||| ||| ||||    
T  21947413 aaaataaaacgatattcattcattcaaatcgatagagtaca 21947453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 35000093 - 35000021
Alignment:
Q  56 ttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgtatcatcactc 128  Q
    ||||||| |||||| ||||| | | |||||||  | |||||||||||||||||  |||||||||||| |||||    
T  35000093 ttgccacatgtcaggattttgtatgggtgtaagagatgtattgccacatgggggtgtacatgtatcaccactc 35000021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 45639712 - 45639640
Alignment:
Q  56 ttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgtatcatcactc 128  Q
    ||||||| ||| || ||||| ||| |||||||  |||||||||||||| ||||  |||||||||||| |||||    
T  45639712 ttgccacatgttaggattttgtgtgggtgtaagaggtgtattgccacaagggggtgtacatgtatcaccactc 45639640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 5e-57; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 46941118 - 46941246
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||  ||||||||||    
T  46941118 tttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttatgtgggtgtaaagagtgtattgcc 46941217  T
Q  101 acatggggtggtacatgtatcatcactct 129  Q
    |||||||||||||||||||||||||||||    
T  46941218 acatggggtggtacatgtatcatcactct 46941246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 24688437 - 24688310
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||| ||| || |||||||||||||||||    
T  24688437 tttggtaagttcatctcacaaccacactttatcttctatttatgtggggtccaggttgccacgtgtcagaattttgtgtgggggtaaatggtgtattgcc 24688338  T
Q  101 acatggggtggtacatgtatcatcactc 128  Q
    ||||||||||||||||||||||||||||    
T  24688337 acatggggtggtacatgtatcatcactc 24688310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 40808930 - 40809057
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||| | |||||| |||||||||||    
T  40808930 tttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtgtggatgtaaaaggtgtattgcc 40809029  T
Q  101 acatggggtggtacatgtatcatcactc 128  Q
    ||||||||||||||||||||||||||||    
T  40809030 acatggggtggtacatgtatcatcactc 40809057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 36150195 - 36150324
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||| ||| | |||||| |||||||||||    
T  36150195 tttggtaagttcatctcacaaccacactttatcttctatttgtgtggagtccaggttgccacgtgtcagaattttgtgtggatgtaaagggtgtattgcc 36150294  T
Q  101 acatggggtggtacatgtatcatcactctt 130  Q
    |||||||||||||||||||||| |||||||    
T  36150295 acatggggtggtacatgtatcaccactctt 36150324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 42394454 - 42394325
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||| |||||| | | |||||||| |||||||||||    
T  42394454 tttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcaaaattttgtatgggtgtaaagggtgtattgcc 42394355  T
Q  101 acatggggtggtacatgtatcatcactctt 130  Q
    ||||||||||||||||||||||||||||||    
T  42394354 acatggggtggtacatgtatcatcactctt 42394325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 54246179 - 54246054
Alignment:
Q  5 gtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacat 104  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||| ||||||||   |||||||||||||    
T  54246179 gtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttatgtgggtgtaaagaatgtattgccacat 54246080  T
Q  105 ggggtggtacatgtatcatcactctt 130  Q
    ||||||||||||||||||||||||||    
T  54246079 ggggtggtacatgtatcatcactctt 54246054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 40480814 - 40480941
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||| ||| |||||||| |||||||||||    
T  40480814 tttggtaagttcatctcacaaccacactttatcttctatttgtgtagggtccaggttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgcc 40480913  T
Q  101 acatggggtggtacatgtatcatcactc 128  Q
     ||||||||| |||||||||||||||||    
T  40480914 gcatggggtgatacatgtatcatcactc 40480941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 53581893 - 53581766
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||| |||||||| |||||||||||    
T  53581893 tttgataagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgcc 53581794  T
Q  101 acatggggtggtacatgtatcatcactc 128  Q
    |||| |||||||||| ||||||||||||    
T  53581793 acatagggtggtacaggtatcatcactc 53581766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 54237161 - 54237288
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| || | | |||||||| |||||||||||    
T  54237161 tttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaatattgtatgggtgtaaagggtgtattgcc 54237260  T
Q  101 acatggggtggtacatgtatcatcactc 128  Q
    ||||||||||||||||||||||||||||    
T  54237261 acatggggtggtacatgtatcatcactc 54237288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 47191061 - 47190932
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||| ||| |||||||| |||||||||||    
T  47191061 tttgataagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttaccacatgtcagaattttgtgtgggtgtaaagggtgtattgcc 47190962  T
Q  101 acatggggtggtacatgtatcatcactctt 130  Q
    ||||||  ||||||||||||||||||||||    
T  47190961 acatggaatggtacatgtatcatcactctt 47190932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 5 - 129
Target Start/End: Original strand, 52629897 - 52630021
Alignment:
Q  5 gtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacat 104  Q
    ||||||||||||||||||||||||||||||||||||| ||| || |||| ||||| ||||||||||||||| ||| |||||||| |||||||||||||||    
T  52629897 gtaagttcatctcacaaccacactttatcttctatttatgtagggtccaggttgctacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacat 52629996  T
Q  105 ggggtggtacatgtatcatcactct 129  Q
    |||||||||||||||||||||||||    
T  52629997 ggggtggtacatgtatcatcactct 52630021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 5 - 129
Target Start/End: Original strand, 25413750 - 25413874
Alignment:
Q  5 gtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacat 104  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||| |||| ||| |||||||| ||||||||| || ||    
T  25413750 gtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttaccacgtgtcagagttttgtgtgggtgtaaagggtgtattgtcatat 25413849  T
Q  105 ggggtggtacatgtatcatcactct 129  Q
    |||||||||||||||||||||||||    
T  25413850 ggggtggtacatgtatcatcactct 25413874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 42100753 - 42100880
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||  | || ||||||||||||||||||||||||| |||||||| |||| ||||||    
T  42100753 tttggtaagttcatctcacaaccacattttatcttttatttgtgtggagttcaggttgccacgtgtcagaattttatgtgggtgtaaagggtgcattgcc 42100852  T
Q  101 acatggggtggtacatgtatcatcactc 128  Q
    ||||| |||||||||||||| |||||||    
T  42100853 acatgaggtggtacatgtatgatcactc 42100880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 45126963 - 45126836
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||| ||||  || |||| || ||||||||||||| |||||||| |||||||||||    
T  45126963 tttggtaagttcatctcacaaccacactttattttctatttatgtggggtccagattaccacatgccagaattttatgtgggtgtaaagggtgtattgcc 45126864  T
Q  101 acatggggtggtacatgtatcatcactc 128  Q
    |||||| ||||||||||||||| |||||    
T  45126863 acatggagtggtacatgtatcaccactc 45126836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 30 - 130
Target Start/End: Original strand, 1078312 - 1078412
Alignment:
Q  30 tatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgtatcatcactct 129  Q
    ||||||||||||||||||  | || ||||||||||||||||||||| ||| | |||||| |||||||||||||||| |||||||||||||||||||||||    
T  1078312 tatcttctatttgtgtggagttcaggttgccacgtgtcagaattttgtgtggatgtaaagggtgtattgccacatgaggtggtacatgtatcatcactct 1078411  T
Q  130 t 130  Q
    |    
T  1078412 t 1078412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 53273719 - 53273599
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||| |||||||||| ||||| ||||||||||| ||| |||||| ||||||||||      |||||   |||||||||||    
T  53273719 tttggtaagttcatctcacaaccatactttatcttttatttatgtgggatccaggttaccacgtatcagaatttt------gtgta---ggtgtattgcc 53273629  T
Q  101 acatggggtggtacatgtatcatcactctt 130  Q
    ||||||| ||||||||||||||||||||||    
T  53273628 acatgggatggtacatgtatcatcactctt 53273599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 27748628 - 27748746
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||| |||| |||||||| |||||||||||| |||          |||||||||||    
T  27748628 tttggtaagttcatctcacaacaatactttatcttctatttgtgtggggtccaggttgccacatgtcagaattttgtgt---------cggtgtattgcc 27748718  T
Q  101 acatggggtggtacatgtatcatcactc 128  Q
    |||||||||||||||||||||| |||||    
T  27748719 acatggggtggtacatgtatcaccactc 27748746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 51249373 - 51249447
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaatttt 75  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||||||  ||||||| ||||||||||||    
T  51249373 tttggtaaattcatctcacaaccacactttctcttctatttgtgtgggatccagattgccacatgtcagaatttt 51249447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 38 - 130
Target Start/End: Complemental strand, 29556956 - 29556865
Alignment:
Q  38 atttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgtatcatcactctt 130  Q
    ||||||||||| | || |||||||| ||||||| |||||| | ||||||||| |||||||||||||||  ||||||||||||||| |||||||    
T  29556956 atttgtgtggggttcaggttgccacatgtcaga-ttttatatgggtgtaaattgtgtattgccacatgtagtggtacatgtatcaccactctt 29556865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 12116396 - 12116354
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  12116396 caaaaataaaatgatattcattcattcaaatcgagagattaca 12116354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 25631302 - 25631344
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  25631302 caaaaataaaatgatattcattcattcaaatcgagagattaca 25631344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 36906420 - 36906378
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  36906420 caaaaataaaatgatattcattcattcaaatcgagagattaca 36906378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 424 - 463
Target Start/End: Complemental strand, 46934937 - 46934898
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagatt 463  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  46934937 caaaaataaaatgatattcattcattcaaatcgagagatt 46934898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 2342746 - 2342704
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  2342746 caaaaacaaaatgatattcattcattcaaatcgagagattaca 2342704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 3848695 - 3848737
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  3848695 caaaaataaaaagatattcattcattcaaatcgagagattaca 3848737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 4178863 - 4178821
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  4178863 caaaaacaaaatgatattcattcattcaaatcgagagattaca 4178821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 25162734 - 25162692
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  25162734 caaaaacaaaatgatattcattcattcaaatcgagagattaca 25162692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 32607767 - 32607725
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  32607767 caaaaacaaaatgatattcattcattcaaatcgagagattaca 32607725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 35498976 - 35499018
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  35498976 caaaaataaaatgatattcattcattcaaatcgagggattaca 35499018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 19148881 - 19148950
Alignment:
Q  49 atccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgt 118  Q
    ||||| |||||||  |||||||||||| ||| ||||||| ||||||||||||||||||||  ||||||||    
T  19148881 atccaggttgccatatgtcagaattttgtgtgggtgtaagtggtgtattgccacatgggggtgtacatgt 19148950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 425 - 466
Target Start/End: Original strand, 38440368 - 38440409
Alignment:
Q  425 aaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  38440368 aaaaataaaatgatattcattcattcaaatcgaaagattaca 38440409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 424 - 465
Target Start/End: Original strand, 38854815 - 38854856
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattac 465  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  38854815 caaaaacaaaatgatattcattcattcaaatcgagagattac 38854856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 9434244 - 9434316
Alignment:
Q  56 ttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgtatcatcactc 128  Q
    ||||||| |||||||||||| ||| |||||||  ||||||||||||||||||   |||||||||||| |||||    
T  9434244 ttgccacatgtcagaattttgtgtgggtgtaagaggtgtattgccacatgggagtgtacatgtatcaccactc 9434316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 44907175 - 44907217
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||||| ||||||    
T  44907175 caaaaacaaaatgatattcattcattcaaatcgagatattaca 44907217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 50611194 - 50611236
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||||| ||||||    
T  50611194 caaaaacaaaatgatattcattcattcaaatcgagatattaca 50611236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 51202040 - 51202082
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||| ||||||||||||||||||||||||    
T  51202040 caaaaacaaaatgatatttattcattcaaatcgagagattaca 51202082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 9998762 - 9998720
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||||||||| |||||||||||||||||||||| ||| ||||    
T  9998762 caaaaataaaacgatattcattcattcaaatcgatagagtaca 9998720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 10108531 - 10108489
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||||||||| |||||||||||||||||||||| ||| ||||    
T  10108531 caaaaataaaacgatattcattcattcaaatcgatagagtaca 10108489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 10233365 - 10233323
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||||||||| |||||||||||||||||||||| ||| ||||    
T  10233365 caaaaataaaacgatattcattcattcaaatcgatagagtaca 10233323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 17238103 - 17238061
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| |||||||||||||||||||||||| |||| ||||||    
T  17238103 caaaaacaaaatgatattcattcattcaaattgagatattaca 17238061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 21533602 - 21533644
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||| ||| ||||    
T  21533602 caaaaacaaaatgatattcattcattcaaatcgatagagtaca 21533644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 29503759 - 29503717
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||| | ||||||||    
T  29503759 caaaaacaaaatgatattcattcattcaaatcaatagattaca 29503717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 30648495 - 30648537
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||| |||| | ||||||||||||||||||||||||||||||    
T  30648495 caaaattaaactaatattcattcattcaaatcgagagattaca 30648537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 36910559 - 36910601
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||||||||| |||||||||||||||||||||| ||| ||||    
T  36910559 caaaaataaaacgatattcattcattcaaatcgatagagtaca 36910601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 47041841 - 47041883
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| |||||||||||||||||||||||| || ||||||||    
T  47041841 caaaaacaaaatgatattcattcattcaaatagatagattaca 47041883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 48650527 - 48650569
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||| ||| ||||    
T  48650527 caaaaacaaaatgatattcattcattcaaatcgatagagtaca 48650569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 457
Target Start/End: Complemental strand, 10229771 - 10229738
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcga 457  Q
    ||||||||||| ||||||||||||||||||||||    
T  10229771 caaaaataaaacgatattcattcattcaaatcga 10229738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 11064748 - 11064655
Alignment:
Q  10 ttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccaca 103  Q
    ||||||||| || |||||||  ||||||||||||||||| || |  || |||| ||||| |||||| ||| |||||||  ||||||||| ||||    
T  11064748 ttcatctcataatcacacttactcttctatttgtgtggggtctagattaccacatgtcaaaattttgtgtgggtgtaaggggtgtattgtcaca 11064655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 130
Target Start/End: Original strand, 40488173 - 40488214
Alignment:
Q  89 tggtgtattgccacatggggtggtacatgtatcatcactctt 130  Q
    |||||||||||||||| || ||||| ||||||||||||||||    
T  40488173 tggtgtattgccacataggatggtatatgtatcatcactctt 40488214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 426 - 454
Target Start/End: Complemental strand, 4822098 - 4822070
Alignment:
Q  426 aaaataaaatgatattcattcattcaaat 454  Q
    |||||||||||||||||||||||||||||    
T  4822098 aaaataaaatgatattcattcattcaaat 4822070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 51757713 - 51757784
Alignment:
Q  56 ttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgtatcatcactc 128  Q
    ||||||| |||||| ||| | ||| |||||||  ||| |||||||||||||||| |||||||||||| |||||    
T  51757713 ttgccacatgtcaggattgtgtgtgggtgtaagaggtatattgccacatggggt-gtacatgtatcaccactc 51757784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 112; Significance: 2e-56; HSPs: 67)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 30838697 - 30838828
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||| |||||||| |||||||||||    
T  30838697 tttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtgtaggtgtaaaaggtgtattgcc 30838796  T
Q  101 acatggggtggtacatgtatcatcactcttga 132  Q
    ||||||||||||||||||||||||||||||||    
T  30838797 acatggggtggtacatgtatcatcactcttga 30838828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 42849893 - 42849768
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||| |||||||| |||||||||||    
T  42849893 tttgataagttcatctcacaaccacactttat-ttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgcc 42849795  T
Q  101 acatggggtggtacatgtatcatcact 127  Q
    |||||||||||||||||||||||||||    
T  42849794 acatggggtggtacatgtatcatcact 42849768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 19047222 - 19047351
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||| |||||| | | |||||||| |||||||||||    
T  19047222 tttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcaaaattttgtatgggtgtaaagggtgtattgcc 19047321  T
Q  101 acatggggtggtacatgtatcatcactctt 130  Q
    ||||||||||||||||||||||||||||||    
T  19047322 acatggggtggtacatgtatcatcactctt 19047351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 4764761 - 4764633
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||| | |||||| |||||||||||    
T  4764761 tttggtaaattcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtgtggatgtaaaaggtgtattgcc 4764662  T
Q  101 acatggggtggtacatgtatcatcactct 129  Q
    ||||| |||||||||||||||||||||||    
T  4764661 acatgaggtggtacatgtatcatcactct 4764633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 43335798 - 43335671
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||| | |||||| ||| |||||||    
T  43335798 tttggtaagttcatctcacaactacactttatcttctatttatgtgggatccaggttgccacgtgtcagaattttgtgtggatgtaaaaggtatattgcc 43335699  T
Q  101 acatggggtggtacatgtatcatcactc 128  Q
    ||||||||||||||||||||||||||||    
T  43335698 acatggggtggtacatgtatcatcactc 43335671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 43490436 - 43490307
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||| ||||  |||||||||||||||||||| | | |||||||| |||||||||||    
T  43490436 tttggtaagttcatctcataaccacactttatcttctatttatgtggggtccagattgccacgtgtcagaattttgtatgggtgtaaagggtgtattgcc 43490337  T
Q  101 acatggggtggtacatgtatcatcactctt 130  Q
    ||||| ||||||||||||| ||||||||||    
T  43490336 acatgaggtggtacatgtagcatcactctt 43490307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 5 - 128
Target Start/End: Original strand, 1750483 - 1750606
Alignment:
Q  5 gtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacat 104  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||| |||  ||||||| ||||| |||||||||    
T  1750483 gtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaattttgtgtgagtgtaaagggtgtgttgccacat 1750582  T
Q  105 ggggtggtacatgtatcatcactc 128  Q
    |||||||||||  |||||||||||    
T  1750583 ggggtggtacaaatatcatcactc 1750606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 5 - 129
Target Start/End: Complemental strand, 12302284 - 12302160
Alignment:
Q  5 gtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacat 104  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||| ||| ||| ||||||||||||| ||| | |||||| | |||||||||||||    
T  12302284 gtaagttcatctcacaaccacactttatcttctatttatgtggggtccaggttaccatgtgtcagaattttgtgtggatgtaaaggatgtattgccacat 12302185  T
Q  105 ggggtggtacatgtatcatcactct 129  Q
    |||||| ||||||||||||| ||||    
T  12302184 ggggtgatacatgtatcatcgctct 12302160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 16096812 - 16096940
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtggga-tccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgc 99  Q
    |||||| |||| |||||||||||||||||||||||||| || ||||||  || ||||||||||||||||||||||| ||| |||||||| ||||||||||    
T  16096812 tttggtgagttaatctcacaaccacactttatcttctacttatgtgggggtctaagttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgc 16096911  T
Q  100 cacatggggtggtacatgtatcatcactc 128  Q
    ||||||  |||||||||||||||||||||    
T  16096912 cacatgatgtggtacatgtatcatcactc 16096940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 34817811 - 34817682
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||| ||||||||||||||||||||| ||||||||||||  |||||||| |||||||| |||||||||||| | | |||||||  || | ||||||    
T  34817811 tttggtaaattcatctcacaaccacactttctcttctatttgtacgggatccaggttgccacatgtcagaattttgtatgggtgtaaggggagcattgcc 34817712  T
Q  101 acatggggtggtacatgtatcatcactctt 130  Q
    ||||||||  ||||||||||||||||||||    
T  34817711 acatgggggtgtacatgtatcatcactctt 34817682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 39149327 - 39149201
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    ||||||||||||||| |||||| |||||||||||| |||||||||||| || || || |||||| ||| |||||| ||| |||||||| |||||||| ||    
T  39149327 tttggtaagttcatcccacaactacactttatcttttatttgtgtggg-tctaaattaccacgtctcataattttgtgtgggtgtaaaaggtgtattacc 39149229  T
Q  101 acatggggtggtacatgtatcatcactct 129  Q
    |||| ||||||||||||||||||||||||    
T  39149228 acat-gggtggtacatgtatcatcactct 39149201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 13780770 - 13780676
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgta 95  Q
    |||| ||| ||||||||||||||||||||| |||||||||| |||||| |||| |||||||| |||||||||||| | | |||||||| ||||||    
T  13780770 tttgataaattcatctcacaaccacactttctcttctatttatgtggggtccaggttgccacatgtcagaattttgtataggtgtaaagggtgta 13780676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 42026834 - 42026956
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    ||||| || ||||||||||||| ||||||| | ||||||||||||||| || | ||||| |  |||||||||||| ||| |||||||  |||||||||||    
T  42026834 tttggcaaattcatctcacaactacactttcttttctatttgtgtggggtctaggttgcaagatgtcagaattttgtgtgggtgtaaggggtgtattgcc 42026933  T
Q  101 acatggggtggtacatgtatcat 123  Q
    |||||| |  |||||||||||||    
T  42026934 acatggaggtgtacatgtatcat 42026956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 8806171 - 8806129
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  8806171 caaaaataaaatgatattcattcattcaaatcgagagattaca 8806129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 41431333 - 41431291
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  41431333 caaaaataaaatgatattcattcattcaaatcgagagattaca 41431291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 425 - 466
Target Start/End: Complemental strand, 30420973 - 30420932
Alignment:
Q  425 aaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  30420973 aaaaataaaatgatattcattcattcaaatcgagagattaca 30420932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 424 - 465
Target Start/End: Original strand, 32678899 - 32678940
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattac 465  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  32678899 caaaaataaaatgatattcattcattcaaatcgagagattac 32678940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 424 - 464
Target Start/End: Original strand, 3268611 - 3268651
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagatta 464  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  3268611 caaaaataaaatgatattcattcattcaaatcgagagatta 3268651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 426 - 466
Target Start/End: Complemental strand, 7558755 - 7558715
Alignment:
Q  426 aaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  7558755 aaaataaaatgatattcattcattcaaatcgagagattaca 7558715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 424 - 464
Target Start/End: Original strand, 33228764 - 33228804
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagatta 464  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  33228764 caaaaataaaatgatattcattcattcaaatcgagagatta 33228804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 4193142 - 4193100
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  4193142 caaaaacaaaatgatattcattcattcaaatcgagagattaca 4193100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 4228428 - 4228386
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  4228428 caaaaacaaaatgatattcattcattcaaatcgagagattaca 4228386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 8896618 - 8896544
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaatttt 75  Q
    |||||||| |||||||||||| |||||||| | ||||||||||||| | | || |||||||| ||||||||||||    
T  8896618 tttggtaaattcatctcacaatcacactttcttttctatttgtgtgaggttcaggttgccacatgtcagaatttt 8896544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 20046858 - 20046900
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  20046858 caaaaataaaatgatattcattcatttaaatcgagagattaca 20046900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 21570184 - 21570226
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  21570184 caaaaacaaaatgatattcattcattcaaatcgagagattaca 21570226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 25087340 - 25087298
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  25087340 caaaaacaaaatgatattcattcattcaaatcgagagattaca 25087298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 31580431 - 31580473
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  31580431 caaaaacaaaatgatattcattcattcaaatcgagagattaca 31580473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 32913533 - 32913491
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  32913533 caaaaacaaaatgatattcattcattcaaatcgagagattaca 32913491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 34895721 - 34895647
Alignment:
Q  56 ttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgtatcatcactctt 130  Q
    ||||||| |||||| ||||| ||| |||||||  |||||||||||||||||||  |||||||||||| |||||||    
T  34895721 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatgggggtgtacatgtatcaccactctt 34895647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 36234303 - 36234261
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  36234303 caaaaacaaaatgatattcattcattcaaatcgagagattaca 36234261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 425 - 466
Target Start/End: Original strand, 38575263 - 38575304
Alignment:
Q  425 aaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  38575263 aaaaacaaaatgatattcattcattcaaatcgagagattaca 38575304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 425 - 466
Target Start/End: Complemental strand, 45128496 - 45128455
Alignment:
Q  425 aaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  45128496 aaaaataaaatgatattcattaattcaaatcgagagattaca 45128455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 11825634 - 11825562
Alignment:
Q  56 ttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgtatcatcactc 128  Q
    ||||||| |||||| ||||| ||| |||||||  |||||||||||||||||||  |||||||||||| |||||    
T  11825634 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatggggatgtacatgtatcaccactc 11825562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 424 - 464
Target Start/End: Complemental strand, 22422033 - 22421993
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagatta 464  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  22422033 caaaaacaaaatgatattcattcattcaaatcgagagatta 22421993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 424 - 464
Target Start/End: Original strand, 27248927 - 27248967
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagatta 464  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  27248927 caaaaacaaaatgatattcattcattcaaatcgagagatta 27248967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 424 - 463
Target Start/End: Original strand, 2808249 - 2808288
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagatt 463  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  2808249 caaaaacaaaatgatattcattcattcaaatcgagagatt 2808288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 83957 - 83999
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||||||||||| |||||||||||||||||||||| ||||||    
T  83957 caaaaataaaatggtattcattcattcaaatcgagatattaca 83999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 1415863 - 1415821
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||| ||||||||    
T  1415863 caaaaacaaaatgatattcattcattcaaatcgatagattaca 1415821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 3725485 - 3725443
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||| ||||||||||||||||||||    
T  3725485 caaaaacaaaatgatattcatttattcaaatcgagagattaca 3725443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 6518474 - 6518400
Alignment:
Q  56 ttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgtatcatcactctt 130  Q
    ||||||| |||||| ||||| ||| |||||||| ||||||||| ||||||| |  |||||||||||| |||||||    
T  6518474 ttgccacatgtcaggattttgtgtgggtgtaaaaggtgtattgacacatggaggtgtacatgtatcaccactctt 6518400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 7015487 - 7015529
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||| ||||||||||||||||||||||||    
T  7015487 caaaaacaaaatgatatttattcattcaaatcgagagattaca 7015529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 8971404 - 8971446
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| |||||||||| |||||||||||||||||||||||||    
T  8971404 caaaaacaaaatgatatccattcattcaaatcgagagattaca 8971446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 9986118 - 9986160
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| |||||||||||||||||| |||||||||||||||||    
T  9986118 caaaaacaaaatgatattcattcatccaaatcgagagattaca 9986160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 12531643 - 12531569
Alignment:
Q  56 ttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgtatcatcactctt 130  Q
    ||||||| |||||| ||||| ||| |||||||  |||||||||||| |||| |  ||||||||||||||||||||    
T  12531643 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccatatggaggtgtacatgtatcatcactctt 12531569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 18491825 - 18491899
Alignment:
Q  56 ttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgtatcatcactctt 130  Q
    ||||||| ||| || ||||| ||| |||||||  |||||||||||||||||||  |||||||||||| |||||||    
T  18491825 ttgccacatgttaggattttgtgtgggtgtaagaggtgtattgccacatgggggtgtacatgtatcaccactctt 18491899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 34600519 - 34600477
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| |||||||||| |||||||||||||||||||||||||    
T  34600519 caaaaacaaaatgatatccattcattcaaatcgagagattaca 34600477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 41281954 - 41281880
Alignment:
Q  56 ttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgtatcatcactctt 130  Q
    ||||||| |||||| ||||| ||| |||||||  |||||||||||| ||||||  |||||||||||| |||||||    
T  41281954 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccatatgggggtgtacatgtatcaccactctt 41281880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 424 - 457
Target Start/End: Original strand, 4041388 - 4041421
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcga 457  Q
    ||||||||||||||||||||||||||||||||||    
T  4041388 caaaaataaaatgatattcattcattcaaatcga 4041421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 425 - 466
Target Start/End: Original strand, 40625834 - 40625875
Alignment:
Q  425 aaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||| |||||||||||||| |||||||||||||||||||||    
T  40625834 aaaaacaaaatgatattcatccattcaaatcgagagattaca 40625875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 966814 - 966742
Alignment:
Q  56 ttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgtatcatcactc 128  Q
    ||||||| |||||| ||||| ||| |||||||  |||||||| ||||||||||  |||||||||||| |||||    
T  966814 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtatttccacatggggatgtacatgtatcaccactc 966742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 424 - 464
Target Start/End: Original strand, 12236834 - 12236874
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagatta 464  Q
    |||||||||||||||||||||||||| |||| |||||||||    
T  12236834 caaaaataaaatgatattcattcatttaaattgagagatta 12236874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 425 - 457
Target Start/End: Original strand, 17248943 - 17248975
Alignment:
Q  425 aaaaataaaatgatattcattcattcaaatcga 457  Q
    |||||||||||||||||||||||||||||||||    
T  17248943 aaaaataaaatgatattcattcattcaaatcga 17248975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 424 - 464
Target Start/End: Original strand, 26025272 - 26025312
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagatta 464  Q
    |||||| |||||||||||||||||||||||| |||||||||    
T  26025272 caaaaacaaaatgatattcattcattcaaattgagagatta 26025312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 43114677 - 43114749
Alignment:
Q  56 ttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgtatcatcactc 128  Q
    ||||||| |||||| ||||| ||| |||||||  |||||||||||||||| ||  |||||||||||| |||||    
T  43114677 ttgccacttgtcaggattttgtgtgggtgtaagaggtgtattgccacatgagggtgtacatgtatcaccactc 43114749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 454
Target Start/End: Original strand, 12553963 - 12553993
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaat 454  Q
    |||||||||||||||||||||||||||||||    
T  12553963 caaaaataaaatgatattcattcattcaaat 12553993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 33924011 - 33923969
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| |||| |||||||||||||||||||||| ||||||||    
T  33924011 caaaaacaaaacgatattcattcattcaaatcgatagattaca 33923969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 454
Target Start/End: Original strand, 36175306 - 36175336
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaat 454  Q
    |||||||||||||||||||||||||||||||    
T  36175306 caaaaataaaatgatattcattcattcaaat 36175336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 457
Target Start/End: Original strand, 459052 - 459085
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcga 457  Q
    ||||||||||| ||||||||||||||||||||||    
T  459052 caaaaataaaacgatattcattcattcaaatcga 459085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 466
Target Start/End: Complemental strand, 4100635 - 4100594
Alignment:
Q  425 aaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||| |||| |||||||||||||||||||||| ||||||||    
T  4100635 aaaaacaaaacgatattcattcattcaaatcgatagattaca 4100594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 466
Target Start/End: Original strand, 12677246 - 12677287
Alignment:
Q  425 aaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||| |||| |||||||||||||||||||||| ||||||||    
T  12677246 aaaaacaaaacgatattcattcattcaaatcgacagattaca 12677287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 426 - 466
Target Start/End: Complemental strand, 8308398 - 8308358
Alignment:
Q  426 aaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||| |||| |||||||||||||||||||||| ||||||||    
T  8308398 aaaacaaaacgatattcattcattcaaatcgatagattaca 8308358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 12415432 - 12415368
Alignment:
Q  64 tgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgtatcatcactc 128  Q
    |||||||||||| ||| | |||||  ||||||||||||||||||   |||||||||||| |||||    
T  12415432 tgtcagaattttgtgtggatgtaagaggtgtattgccacatgggagtgtacatgtatcaccactc 12415368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 12427492 - 12427428
Alignment:
Q  64 tgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgtatcatcactc 128  Q
    |||||||||||| ||| | |||||  ||||||||||||||||||   |||||||||||| |||||    
T  12427492 tgtcagaattttgtgtggatgtaagaggtgtattgccacatgggagtgtacatgtatcaccactc 12427428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 16804088 - 16804160
Alignment:
Q  56 ttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgtatcatcactc 128  Q
    ||||||| |||||||||||| ||| |||||||  ||||||||| || || |||  |||||||||||| |||||    
T  16804088 ttgccacatgtcagaattttgtgtgggtgtaagaggtgtattgtcatataggggtgtacatgtatcaccactc 16804160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 16843370 - 16843442
Alignment:
Q  56 ttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgtatcatcactc 128  Q
    ||||||| |||||||||||| ||| |||||||  ||||||||| || || |||  |||||||||||| |||||    
T  16843370 ttgccacatgtcagaattttgtgtgggtgtaagaggtgtattgtcatataggggtgtacatgtatcaccactc 16843442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 425 - 457
Target Start/End: Complemental strand, 28037389 - 28037357
Alignment:
Q  425 aaaaataaaatgatattcattcattcaaatcga 457  Q
    ||||||||||||||||||||||||||| |||||    
T  28037389 aaaaataaaatgatattcattcattcagatcga 28037357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 424 - 460
Target Start/End: Original strand, 33759978 - 33760014
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagag 460  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  33759978 caaaaacaaaataatattcattcattcaaatcgagag 33760014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 108; Significance: 5e-54; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 5 - 128
Target Start/End: Original strand, 2547065 - 2547188
Alignment:
Q  5 gtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacat 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  2547065 gtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgccacat 2547164  T
Q  105 ggggtggtacatgtatcatcactc 128  Q
     |||||||||||||||||||||||    
T  2547165 agggtggtacatgtatcatcactc 2547188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 36743518 - 36743390
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||| | | ||||||||||||||||||||    
T  36743518 tttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaattttgtatgggtgtaaatggtgtattgcc 36743419  T
Q  101 acatggggtggtacatgtatcatcactct 129  Q
    |||||||||||||||||||||||||||||    
T  36743418 acatggggtggtacatgtatcatcactct 36743390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 29705427 - 29705549
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||| |||||||| |||||||||||    
T  29705427 tttgataagttcatctcacaaccacactttatcttctatttgtgcggggtccaagttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgcc 29705526  T
Q  101 acatggggtggtacatgtatcat 123  Q
    |||||||||||||||||||||||    
T  29705527 acatggggtggtacatgtatcat 29705549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 42197470 - 42197344
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||| |||||| ||| |||||||| |||||||||||    
T  42197470 tttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcaaaattttgtgtgggtgtaaagggtgtattgcc 42197371  T
Q  101 acatggggtggtacatgtatcatcact 127  Q
    |||||||||||||||||||||||||||    
T  42197370 acatggggtggtacatgtatcatcact 42197344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 20148825 - 20148954
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||  |||||||||||||||||||||||| |||||||| |||||||||||    
T  20148825 tttggtaagttcatctcacaaccacactttatcatctatttatgtgggatccagattgccacgtgtcagaattttatgtgggtgtaaagggtgtattgcc 20148924  T
Q  101 acatggggtggtacatgtatcatcactctt 130  Q
    |||||| ||||||||||||||| |||||||    
T  20148925 acatggtgtggtacatgtatcaccactctt 20148954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 31384729 - 31384856
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||| | |||||| ||| |||||||    
T  31384729 tttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgctacgtgtcagaattttatgtggatgtaaagggtatattgcc 31384828  T
Q  101 acatggggtggtacatgtatcatcactc 128  Q
    |||||||||||||||| |||||||||||    
T  31384829 acatggggtggtacatatatcatcactc 31384856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 30660777 - 30660648
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| | |||||| |||||||||||    
T  30660777 tttggtaagttcatcttacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttatgtggatgtaaagggtgtattgcc 30660678  T
Q  101 acatggggtggtacatgtatcatcactctt 130  Q
    |||| || || |||||||||||||||||||    
T  30660677 acataggatgatacatgtatcatcactctt 30660648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 30912597 - 30912468
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||| || | ||||||||||||||||||||| ||| ||||||||  ||||||||||    
T  30912597 tttggtaagttcatctcacaaccgcaccttatcttctatttgtgtggggtctaggttgccacgtgtcagaattttgtgtgggtgtaaagagtgtattgcc 30912498  T
Q  101 acatggggtggtacatgtatcatcactctt 130  Q
    ||||||||||||||||||||||||||||||    
T  30912497 acatggggtggtacatgtatcatcactctt 30912468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 11582831 - 11582959
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||| | | |||||||| |||||||||||    
T  11582831 tttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaattttgtatgggtgtaaagggtgtattgcc 11582930  T
Q  101 acatggggtggtacatgtatcatcactct 129  Q
    ||||| ||||||||||||||||| |||||    
T  11582931 acatgaggtggtacatgtatcattactct 11582959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 5 - 128
Target Start/End: Original strand, 9241621 - 9241744
Alignment:
Q  5 gtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacat 104  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||| ||| |||| ||| ||||| |||||||||    
T  9241621 gtaagttcatctcacaaccacactttatcttctatttatgtggggtccaggttgccacgtgtcagaattttgtgtgggtgcaaagggtgtgttgccacat 9241720  T
Q  105 ggggtggtacatgtatcatcactc 128  Q
    ||||||||||||||||||||||||    
T  9241721 ggggtggtacatgtatcatcactc 9241744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 29800985 - 29800864
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| || |  ||||||| |||||||||||||||| |||||||| |||||||||||    
T  29800985 tttggtaagttcatctcacaaccacactttatcttctatttatgtggggtcaagattgccacatgtcagaattttatgtgggtgtaaagggtgtattgcc 29800886  T
Q  101 acatggggtggtacatgtatca 122  Q
    ||||||||||||||||||||||    
T  29800885 acatggggtggtacatgtatca 29800864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 2165998 - 2165875
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| | || ||||||||||||||||||||| ||| |||||||| ||||||||| |    
T  2165998 tttggtaagttcatctcataaccacactttatcttctatttgtgtggggttcaggttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgtc 2165899  T
Q  101 acatggggtggtacatgtatcatc 124  Q
    ||||||| ||||||||||||||||    
T  2165898 acatgggatggtacatgtatcatc 2165875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 26125700 - 26125825
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| ||||  |||||||||||||||||||||||  |||||||| |||||||||||    
T  26125700 tttggtaagttcatctcacaaccacactttatcttctatttatgtggg-tccagattgccacgtgtcagaattttatgcgggtgtaaagggtgtattgcc 26125798  T
Q  101 acatggggtggtacatgtatcatcact 127  Q
    |||||||||||||||| ||||| ||||    
T  26125799 acatggggtggtacatatatcaccact 26125825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 5 - 129
Target Start/End: Original strand, 45397385 - 45397508
Alignment:
Q  5 gtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacat 104  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||  |||||||||||||||||||| ||| |||||||| ||||| |||||||||    
T  45397385 gtaagttcatctcacaaccacaatttatcttctatttgtgtgggctccagattgccacgtgtcagaattttgtgtgggtgtaaagggtgtgttgccacat 45397484  T
Q  105 ggggtggtacatgtatcatcactct 129  Q
     ||||||||||||||||||||||||    
T  45397485 -gggtggtacatgtatcatcactct 45397508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 3743836 - 3743963
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||| |||||||||||||||||||||||||||||||||||| ||| || | ||  |||||||||||||||||||||||| |||||||| ||||||||||     
T  3743836 tttgataagttcatctcacaaccacactttatcttctatttatgtagggttcagattgccacgtgtcagaattttatgtgggtgtaaagggtgtattgct 3743935  T
Q  101 acatggggtggtacatgtatcatcactc 128  Q
    |||||||||||||||| |||||||||||    
T  3743936 acatggggtggtacatatatcatcactc 3743963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 5754968 - 5755072
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||| |||||||| |||||||||||    
T  5754968 tttggtaagttcatctcacaaccacactttatcttctatttatgtgggatccaagttgccacgtgttagaattttgtgtgggtgtaaagggtgtattgcc 5755067  T
Q  101 acatg 105  Q
     ||||    
T  5755068 ccatg 5755072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 42295260 - 42295386
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||| ||| | |||||| ||| |||||||    
T  42295260 tttggtaagttcatctcacaaccacactttatcttctatttatgtggg-tccaagttgccacatgtcagaattttgtgtggatgtaaagggtatattgcc 42295358  T
Q  101 acatggggtggtacatgtatcatcactc 128  Q
    |||| || |||||||| |||||||||||    
T  42295359 acataggatggtacatttatcatcactc 42295386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 1375607 - 1375736
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||| || |||||||||| ||||||||||||||||||||||||  | ||  ||||||||||| ||||| || ||| ||||||||   ||||||| |    
T  1375607 tttggtaaatttatctcacaactacactttatcttctatttgtgtggagttcagattgccacgtgttagaatcttgtgtgggtgtaaagaatgtattgtc 1375706  T
Q  101 acatggggtggtacatgtatcatcactctt 130  Q
    |||| ||||||||||||||||| |||||||    
T  1375707 acatagggtggtacatgtatcaccactctt 1375736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 40528657 - 40528542
Alignment:
Q  13 atctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggt 112  Q
    |||||||||||||||||| ||||||||||||||||| | ||||||| ||| ||||| |||||| ||| | |||||||| | ||||| |||||| ||  |     
T  40528657 atctcacaaccacactttctcttctatttgtgtggggttcaagttgtcacatgtcataattttgtgtggatgtaaatgatatattgtcacatgagggtgc 40528558  T
Q  113 acatgtatcatcactc 128  Q
    |||||||||| |||||    
T  40528557 acatgtatcaccactc 40528542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 4809272 - 4809230
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  4809272 caaaaataaaatgatattcattcattcaaatcgagagattaca 4809230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 9073026 - 9072984
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  9073026 caaaaataaaatgatattcattcattcaaatcgagagattaca 9072984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 29777527 - 29777485
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  29777527 caaaaataaaatgatattcattcattcaaatcgagagattaca 29777485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 9498375 - 9498417
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  9498375 caaaaataaaatgatattcattcattcaaatcgagatattaca 9498417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 14906699 - 14906741
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  14906699 caaaaacaaaatgatattcattcattcaaatcgagagattaca 14906741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 33896394 - 33896352
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  33896394 caaaaataaaatgatatttattcattcaaatcgagagattaca 33896352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 34612112 - 34612070
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  34612112 caaaaataaaatgatattcattcattaaaatcgagagattaca 34612070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 44578338 - 44578296
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  44578338 caaaaataaaatgatattcatttattcaaatcgagagattaca 44578296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 431 - 466
Target Start/End: Complemental strand, 11267309 - 11267274
Alignment:
Q  431 aaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||||||||||||||||||||||||||||||||||    
T  11267309 aaaatgatattcattcattcaaatcgagagattaca 11267274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 19876506 - 19876464
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||||||||| |||||||||||| |||||||||||    
T  19876506 caaaaataaaatgatatttattcattcaaattgagagattaca 19876464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 23851270 - 23851312
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||| ||||||||||||||||||||||||||    
T  23851270 caaaaacaaaatgataatcattcattcaaatcgagagattaca 23851312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 34304908 - 34304981
Alignment:
Q  56 ttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgtatcatcactctt 130  Q
    ||||||| |||||| ||||| | | |||||||  |||||||||||||||||||| |||||||||||| |||||||    
T  34304908 ttgccacatgtcaggattttgtttgggtgtaagaggtgtattgccacatggggt-gtacatgtatcaccactctt 34304981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 431 - 464
Target Start/End: Original strand, 43135367 - 43135400
Alignment:
Q  431 aaaatgatattcattcattcaaatcgagagatta 464  Q
    ||||||||||||||||||||||||||||||||||    
T  43135367 aaaatgatattcattcattcaaatcgagagatta 43135400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 10678132 - 10678060
Alignment:
Q  56 ttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgtatcatcactc 128  Q
    ||||||| |||||| ||||| ||| |||||||  | |||||||||||||||||  |||||||||||| |||||    
T  10678132 ttgccacatgtcaggattttgtgtgggtgtaagagatgtattgccacatgggggtgtacatgtatcaccactc 10678060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 33629973 - 33629901
Alignment:
Q  56 ttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgtatcatcactc 128  Q
    ||||||| ||||| |||||| ||| |||||||  |||||||||||||||||||  |||||| ||||| |||||    
T  33629973 ttgccacatgtcaaaattttgtgtaggtgtaagaggtgtattgccacatgggggtgtacatatatcaccactc 33629901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 431 - 466
Target Start/End: Complemental strand, 11725981 - 11725946
Alignment:
Q  431 aaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||||||||||||||| |||||||||||    
T  11725981 aaaatgatattcattcattcaaattgagagattaca 11725946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 427 - 466
Target Start/End: Original strand, 37565658 - 37565697
Alignment:
Q  427 aaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||| ||||||||||||||||| |||||||||||||||||    
T  37565658 aaatgaaatgatattcattcatgcaaatcgagagattaca 37565697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 1236489 - 1236531
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||| ||| ||||    
T  1236489 caaaaacaaaatgatattcattcattcaaatcgatagaataca 1236531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 9619133 - 9619175
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||| |||||||||||||||||| |||| ||||||    
T  9619133 caaaaataaaattatattcattcattcaaattgagatattaca 9619175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 30568112 - 30568154
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| |||||||||||||||||||||||| || ||||||||    
T  30568112 caaaaacaaaatgatattcattcattcaaattgatagattaca 30568154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 454
Target Start/End: Original strand, 34680664 - 34680694
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaat 454  Q
    |||||||||||||||||||||||||||||||    
T  34680664 caaaaataaaatgatattcattcattcaaat 34680694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 43889900 - 43889942
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||| |||| |||||||||||    
T  43889900 caaaaacaaaatgatattcattcatttaaattgagagattaca 43889942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 44099712 - 44099754
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||| |||||||||||| |||||||||||    
T  44099712 caaaaacaaaatgatatttattcattcaaattgagagattaca 44099754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 457
Target Start/End: Complemental strand, 12654371 - 12654338
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcga 457  Q
    |||||||||||||||||| |||||||||||||||    
T  12654371 caaaaataaaatgatatttattcattcaaatcga 12654338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 101
Target Start/End: Complemental strand, 18066698 - 18066653
Alignment:
Q  56 ttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcca 101  Q
    ||||||| |||||||||||||||| |||||||  ||||||||||||    
T  18066698 ttgccacatgtcagaattttatgtgggtgtaagaggtgtattgcca 18066653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 466
Target Start/End: Original strand, 32724258 - 32724299
Alignment:
Q  425 aaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||||||||| |||||||||||||  |||||||||||||||    
T  32724258 aaaaataaaattatattcattcatttgaatcgagagattaca 32724299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 35181636 - 35181709
Alignment:
Q  56 ttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgtatcatcactct 129  Q
    ||||||| |||||| ||||| ||| |||||||  ||||||||||||||||  |  |||||||||||| ||||||    
T  35181636 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatgaaggtgtacatgtatcaccactct 35181709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 457
Target Start/End: Original strand, 39152918 - 39152951
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcga 457  Q
    ||||||||||| ||||||||||||||||||||||    
T  39152918 caaaaataaaacgatattcattcattcaaatcga 39152951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 424 - 464
Target Start/End: Original strand, 8412313 - 8412353
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagatta 464  Q
    ||||||||||| |||||||||||||||||||| | ||||||    
T  8412313 caaaaataaaacgatattcattcattcaaatcaatagatta 8412353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 108; Significance: 5e-54; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 33703206 - 33703333
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||| |||||||||||    
T  33703206 tttggtaagttcatctcacaaccacactttatcttctatttgtgcgggatccaagttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgcc 33703305  T
Q  101 acatggggtggtacatgtatcatcactc 128  Q
    | ||||||||||||||||||||||||||    
T  33703306 atatggggtggtacatgtatcatcactc 33703333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 28982857 - 28982728
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||| | |||||| |||||||||||    
T  28982857 tttggtaagttcatctcacaaccgcactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtggatgtaaaaggtgtattgcc 28982758  T
Q  101 acatggggtggtacatgtatcatcactctt 130  Q
    ||||||||||||||||||||||||||||||    
T  28982757 acatggggtggtacatgtatcatcactctt 28982728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 35017797 - 35017924
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| | |||||| | |||||||||    
T  35017797 tttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtggatgtaaaagatgtattgcc 35017896  T
Q  101 acatggggtggtacatgtatcatcactc 128  Q
    ||||||||||||||||||||||||||||    
T  35017897 acatggggtggtacatgtatcatcactc 35017924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 43735807 - 43735936
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | |||||| |||||||||||    
T  43735807 tttgataagttcatctcacaatcacactttatcttctatttgtgtgggatccaagttgtcacgtgtcagaattttatgtggatgtaaagggtgtattgcc 43735906  T
Q  101 acatggggtggtacatgtatcatcactctt 130  Q
    || |||||||||||||||||||||||||||    
T  43735907 acgtggggtggtacatgtatcatcactctt 43735936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 1771301 - 1771172
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||| ||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||| |||||||||| ||| |||||||| |||||||||||    
T  1771301 tttgataagttcatctcacaaccacattttatcttctatttatgtggggtccaagttgccacgtctcagaattttgtgtgggtgtaaagggtgtattgcc 1771202  T
Q  101 acatggggtggtacatgtatcatcactctt 130  Q
    ||||||||||||||||||||||||||||||    
T  1771201 acatggggtggtacatgtatcatcactctt 1771172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 27550374 - 27550503
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||| | | |||||||| |||||||||||    
T  27550374 tttggtaagttcatcttacaaccacactttatcttctatttatgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaagggtgtattgcc 27550473  T
Q  101 acatggggtggtacatgtatcatcactctt 130  Q
    ||||||||||||||||||||||||||||||    
T  27550474 acatggggtggtacatgtatcatcactctt 27550503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 25051758 - 25051885
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||| | |||||||| |||||||||    
T  25051758 tttggtaagttcatctcacaatcacactttatcttctatttatgtggggtccaagttgccacgtgtcagaattttgtgtggatgtaaatgatgtattgcc 25051857  T
Q  101 acatggggtggtacatgtatcatcactc 128  Q
    || |||||||||||||||||||||||||    
T  25051858 acgtggggtggtacatgtatcatcactc 25051885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 5 - 129
Target Start/End: Original strand, 23036049 - 23036173
Alignment:
Q  5 gtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacat 104  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||| ||| |||||||| | ||| |||||||||    
T  23036049 gtaagttcatctcacaaccacactttatcttctatttatgtggggtccaggttgccacgtgtcagaattttgtgtgggtgtaaaggatgtgttgccacat 23036148  T
Q  105 ggggtggtacatgtatcatcactct 129  Q
    |||||||||||||||||||||||||    
T  23036149 ggggtggtacatgtatcatcactct 23036173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 43514721 - 43514594
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| || | ||||||||||||||||||||| ||| | ||||||  ||||||||||    
T  43514721 tttggtaagttcatctcacaaccacaccttatcttctatttgtgtggggtctaggttgccacgtgtcagaattttttgtggatgtaaagagtgtattgcc 43514622  T
Q  101 acatggggtggtacatgtatcatcactc 128  Q
    ||||||||||||||||||||||||||||    
T  43514621 acatggggtggtacatgtatcatcactc 43514594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 27893877 - 27893750
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||| || |  ||||||| |||||||||||||||| |||||||| |||||||||||    
T  27893877 tttggtaatttcatctcacaaccacactttatcttctatttatgtggggtcaagattgccacatgtcagaattttatgtgggtgtaaagggtgtattgcc 27893778  T
Q  101 acatggggtggtacatgtatcatcactc 128  Q
    |||||||||||||||||||||| |||||    
T  27893777 acatggggtggtacatgtatcaccactc 27893750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 43949836 - 43949709
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||| | | ||| |||| |||||||||||    
T  43949836 tttggtaagttcatctcacaaccacactttatcttctatttgtgcgggatccaatatgccacgtgtcagaattttgtatgggtataaagggtgtattgcc 43949737  T
Q  101 acatggggtggtacatgtatcatcactc 128  Q
    | || |||||||||||||||||||||||    
T  43949736 aaatagggtggtacatgtatcatcactc 43949709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 55966381 - 55966252
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||| || |  ||||||| |||||||||||||||| |||||||| |||||||||||    
T  55966381 tttggtaagttcatctcacaaccacaatttatcttctatttatgtggggtctagattgccacctgtcagaattttatgtgggtgtaaagggtgtattgcc 55966282  T
Q  101 acatggggtggtacatgtatcatcactctt 130  Q
    |||||| ||||||||||||||| |||||||    
T  55966281 acatggagtggtacatgtatcaccactctt 55966252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 31680967 - 31681095
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |  |  |||||||||||||||||||||||| |||||||| |||||||||||    
T  31680967 tttggtaagttcatctcacaaccacactttatcttctatttatgtggggtttagattgccacgtgtcagaattttatgtaggtgtaaagggtgtattgcc 31681066  T
Q  101 acatggggtggtacatgtatcatcactct 129  Q
    ||||||| || ||||||||||| ||||||    
T  31681067 acatgggatgctacatgtatcaccactct 31681095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 27864629 - 27864758
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||| | ||  || |||| |||||||||||||||| | |||||| |||||||||||    
T  27864629 tttggtaagttcatctcacaaccacactttattttctatttatgtggggttcagattaccacatgtcagaattttatgtggatgtaaagggtgtattgcc 27864728  T
Q  101 acatggggtggtacatgtatcatcactctt 130  Q
    |||||||||||||||||||||| |||||||    
T  27864729 acatggggtggtacatgtatcaccactctt 27864758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 5 - 128
Target Start/End: Complemental strand, 23204809 - 23204686
Alignment:
Q  5 gtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacat 104  Q
    |||||||||| |||||||||||||||||||||||||| |||||| |||| |||||||| |||||||||||||||| |||||||| | | |||||||||||    
T  23204809 gtaagttcatgtcacaaccacactttatcttctatttatgtggggtccaggttgccacatgtcagaattttatgtgggtgtaaaggatatattgccacat 23204710  T
Q  105 ggggtggtacatgtatcatcactc 128  Q
    ||| |||||| |||||||||||||    
T  23204709 gggatggtacgtgtatcatcactc 23204686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 51512300 - 51512173
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||| | |||||||||||||||| |||||||||||| |||| ||||||||||||||||||||| ||| ||| | || | |||||||||    
T  51512300 tttggtaagttcatcttataaccacactttatcttttatttgtgtggggtccaggttgccacgtgtcagaattttgtgtgggtattaaagatgtattgcc 51512201  T
Q  101 acatggggtggtacatgtatcatcactc 128  Q
    || |||||||||||||||||||||||||    
T  51512200 acgtggggtggtacatgtatcatcactc 51512173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 12497021 - 12497148
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||| |||| |||||||||||||||||||||||| | | ||| ||||||||||| |||||||| ||| ||||||||  |||||||| |    
T  12497021 tttggtaagttcatcttacaatcacactttatcttctatttgtgtgaggttcaatttgccacgtgttagaattttgtgtgggtgtaaaacgtgtattgtc 12497120  T
Q  101 acatggggtggtacatgtatcatcactc 128  Q
    |||||||||||| |||||||||| ||||    
T  12497121 acatggggtggtgcatgtatcattactc 12497148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 27316748 - 27316619
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaa-ttttatgttggtgtaaatggtgtattgc 99  Q
    |||||||||||||||||| |||||||||||||||||||||| | |||  |||||||||||||||||||||| |||| ||| | |||||| |||||||||     
T  27316748 tttggtaagttcatctcataaccacactttatcttctatttatttggagtccaagttgccacgtgtcagaatttttgtgtggatgtaaagggtgtattgt 27316649  T
Q  100 cacatggggtggtacatgtatcatcactct 129  Q
    |||||||| || || |||||||||||||||    
T  27316648 cacatgggatgataaatgtatcatcactct 27316619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 39631166 - 39631275
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |||  || |||||||||||||||| ||| |||||||| | ||||||| |    
T  39631166 tttggtaagttcatctcacaaccacactttatcttctatttgtgtggggttcaatatgtcacgtgtcagaattttgtgtgggtgtaaaggatgtattgtc 39631265  T
Q  101 acatggggtg 110  Q
    ||||||||||    
T  39631266 acatggggtg 39631275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 45490344 - 45490227
Alignment:
Q  5 gtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacat 104  Q
    |||| ||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||| || ||| |||||||||| | |||||||||||    
T  45490344 gtaaattcatctcacaaccacactttatcttctatttgtacgggatccaggttgccacgtgtcagaatcttgtgtgggtgtaaatgatatattgccacat 45490245  T
Q  105 ggggtggtacatgtatca 122  Q
     ||||  |||||||||||    
T  45490244 agggtactacatgtatca 45490227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 48463485 - 48463364
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||| ||||||| |||||||| |||||| | ||  || |||| |||||||||||||||| |||||||| |||||||||||    
T  48463485 tttggtaagttcatctcacaaccatactttattttctatttatgtggggttcagattaccacatgtcagaattttatgtgggtgtaaagggtgtattgcc 48463386  T
Q  101 acatggggtggtacatgtatca 122  Q
    |||| | |||||||||||||||    
T  48463385 acatagagtggtacatgtatca 48463364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 5 - 130
Target Start/End: Original strand, 21687075 - 21687200
Alignment:
Q  5 gtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacat 104  Q
    |||||||||||||| ||||| |||||||||||||||||| |||  | || ||||||||||||||||||||| |||   ||||||   |||||||||||||    
T  21687075 gtaagttcatctcataaccatactttatcttctatttgtctggagttcaggttgccacgtgtcagaattttgtgtgaatgtaaagaatgtattgccacat 21687174  T
Q  105 ggggtggtacatgtatcatcactctt 130  Q
     || |||||||| |||||||||||||    
T  21687175 aggttggtacatatatcatcactctt 21687200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 46412504 - 46412389
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||| |  || |||||||||||||||||||| ||| | ||||||  || ||||| |    
T  46412504 tttggtaagttcttctcacaaccacactttatcttctatttatgtggggtttaaattgccacgtgtcagaattttgtgtagatgtaaaaagtatattgtc 46412405  T
Q  101 acatggggtggtacat 116  Q
    | || |||||||||||    
T  46412404 atatagggtggtacat 46412389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 41878471 - 41878567
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtatt 97  Q
    |||| ||||||||||||||||||| || || ||||||||||||||||| ||||  ||| |||||||||||||||| ||||||||||||  |||||||    
T  41878471 tttgataagttcatctcacaaccaaaccttctcttctatttgtgtggggtccagattgtcacgtgtcagaattttgtgttggtgtaaagagtgtatt 41878567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 41848036 - 41848157
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    ||||| || |||||| |||||||||||||| ||||||||||||||||| | ||  ||| ||| ||||||||||||  || | |||||  |||||||||||    
T  41848036 tttggcaaattcatcgcacaaccacactttctcttctatttgtgtggggttcagattgtcacatgtcagaattttgcgtggatgtaaggggtgtattgcc 41848135  T
Q  101 acatggggtggtacatgtatca 122  Q
    ||||||||  ||||||||||||    
T  41848136 acatgggggtgtacatgtatca 41848157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 41327578 - 41327478
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||| ||||||||||| ||||||||| ||||| ||||||||||| |||| |||||||| ||| |||||||| |||  ||||||  |||||||||||    
T  41327578 tttggtaaattcatctcacatccacactttctcttcaatttgtgtggggtccaggttgccacatgttagaattttttgtgagtgtaaggggtgtattgcc 41327479  T
Q  101 a 101  Q
    |    
T  41327478 a 41327478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 28988538 - 28988666
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||| ||| ||||||||| ||||||||||| ||||||||||||||||| |||| |||||||  |||||||||||| |  ||  ||||  ||||||||| |    
T  28988538 tttgataaattcatctcataaccacactttctcttctatttgtgtggggtccaggttgccatatgtcagaattttgt-atgaggtaaggggtgtattgtc 28988636  T
Q  101 acatggggtggtacatgtatcatcactctt 130  Q
    ||||| ||  |||||||||||| |||||||    
T  28988637 acatgagggtgtacatgtatcaccactctt 28988666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 13 - 129
Target Start/End: Complemental strand, 56215920 - 56215805
Alignment:
Q  13 atctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggt 112  Q
    |||||||||||||||||| ||| ||||||||||||| || | ||||| |  |||||||||||| ||| |||||||  ||||||| ||||||||| |  ||    
T  56215920 atctcacaaccacactttctct-ctatttgtgtggggtctaggttgctatatgtcagaattttgtgtgggtgtaagaggtgtatggccacatggtggtgt 56215822  T
Q  113 acatgtatcatcactct 129  Q
    |||||||||| ||||||    
T  56215821 acatgtatcaccactct 56215805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 4644171 - 4644129
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  4644171 caaaaataaaatgatattcattcattcaaatcgagagattaca 4644129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 10389530 - 10389572
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  10389530 caaaaataaaatgatattcattcattcaaatcgagagattaca 10389572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 424 - 465
Target Start/End: Complemental strand, 1532221 - 1532180
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattac 465  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  1532221 caaaaataaaatgatattcattcattcaaatcgagagattac 1532180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 2115364 - 2115406
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  2115364 caaaaacaaaatgatattcattcattcaaatcgagagattaca 2115406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 9284224 - 9284182
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  9284224 caaaaacaaaatgatattcattcattcaaatcgagagattaca 9284182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 9528653 - 9528695
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  9528653 caaaaacaaaatgatattcattcattcaaatcgagagattaca 9528695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 20569570 - 20569528
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  20569570 caaaaacaaaatgatattcattcattcaaatcgagagattaca 20569528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 25274196 - 25274154
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  25274196 caaaaacaaaatgatattcattcattcaaatcgagagattaca 25274154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 43444705 - 43444663
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  43444705 caaaaataaaatgatattcattcattcaaattgagagattaca 43444663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 51318298 - 51318256
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  51318298 caaaaataaaatgatattcattcatttaaatcgagagattaca 51318256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 53616426 - 53616468
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  53616426 caaaaacaaaatgatattcattcattcaaatcgagagattaca 53616468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 19880074 - 19880147
Alignment:
Q  56 ttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgtatcatcactct 129  Q
    ||||||| |||||| ||||| ||| |||||||  |||||||||||||||||||  |||||||||||| ||||||    
T  19880074 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatgggggtgtacatgtatcaccactct 19880147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 425 - 466
Target Start/End: Original strand, 45227818 - 45227859
Alignment:
Q  425 aaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  45227818 aaaaaaaaaatgatattcattcattcaaatcgagagattaca 45227859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 55272356 - 55272284
Alignment:
Q  56 ttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgtatcatcactc 128  Q
    ||||||| |||||| ||||| ||| |||||||  |||||||||||||||||||  |||||||||||| |||||    
T  55272356 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatgggggtgtacatgtatcaccactc 55272284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 431 - 466
Target Start/End: Original strand, 34024221 - 34024256
Alignment:
Q  431 aaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||||||||||||||||||||||||||||||||||    
T  34024221 aaaatgatattcattcattcaaatcgagagattaca 34024256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 8670795 - 8670753
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||||||||| |||||||||||||||||||||| ||||||||    
T  8670795 caaaaataaaacgatattcattcattcaaatcgatagattaca 8670753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 10359325 - 10359367
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| |||||||||||||||||| |||||||||||||||||    
T  10359325 caaaaacaaaatgatattcattcatccaaatcgagagattaca 10359367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 38706486 - 38706528
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||| ||||||||||||||||||||||||||||||    
T  38706486 caaaaacaaaatcatattcattcattcaaatcgagagattaca 38706528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 462
Target Start/End: Complemental strand, 56199409 - 56199371
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagat 462  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  56199409 caaaaataaaatggtattcattcattcaaatcgagagat 56199371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 424 - 464
Target Start/End: Complemental strand, 868476 - 868436
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagatta 464  Q
    ||||||||||||||||||||||| || ||||||||||||||    
T  868476 caaaaataaaatgatattcattcgtttaaatcgagagatta 868436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 426 - 466
Target Start/End: Original strand, 50766290 - 50766330
Alignment:
Q  426 aaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||| ||||||||||||||||||| ||||||||||||||||    
T  50766290 aaaacaaaatgatattcattcatttaaatcgagagattaca 50766330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 127
Target Start/End: Original strand, 35037125 - 35037195
Alignment:
Q  56 ttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgtatcatcact 127  Q
    ||||||| |||||| ||||| ||| |||||||  ||||||||||||||||| || |||||||||||| ||||    
T  35037125 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatggagt-gtacatgtatcaccact 35037195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 122
Target Start/End: Original strand, 712080 - 712146
Alignment:
Q  56 ttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgtatca 122  Q
    ||||||| |||||| ||||| ||| |||||||  ||||||||||||||||| |  ||||||||||||    
T  712080 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatggaggtgtacatgtatca 712146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 9645300 - 9645342
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||| ||||| ||||||||||||||||||||||||    
T  9645300 caaaaacaaaataatatttattcattcaaatcgagagattaca 9645342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 13634431 - 13634389
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||| ||| ||||    
T  13634431 caaaaacaaaatgatattcattcattcaaatcgatagagtaca 13634389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 17619132 - 17619058
Alignment:
Q  56 ttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgtatcatcactctt 130  Q
    ||||||| |||||| ||||| ||| |||||||  ||||||||||||  |||||  |||||||||||| |||||||    
T  17619132 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccaggtggggatgtacatgtatcaccactctt 17619058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 31381492 - 31381534
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||||||||||  ||||| |||||||||||||||||||||||    
T  31381492 caaaaataaaatcttattcgttcattcaaatcgagagattaca 31381534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 454
Target Start/End: Complemental strand, 36162038 - 36162008
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaat 454  Q
    |||||||||||||||||||||||||||||||    
T  36162038 caaaaataaaatgatattcattcattcaaat 36162008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 44947725 - 44947683
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||||| |||||||| ||||||||| ||||||||||||||||    
T  44947725 caaaaatgaaatgataatcattcatttaaatcgagagattaca 44947683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 49680843 - 49680801
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||| ||||||||||||| |||||||||| |||||    
T  49680843 caaaaataaaataatattcattcatttaaatcgagaggttaca 49680801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 3756232 - 3756159
Alignment:
Q  56 ttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgtatcatcactct 129  Q
    ||||||| |||||  ||||||||| |||||||  | ||||||||||||||||   |||||||||||| ||||||    
T  3756232 ttgccacatgtcatgattttatgtgggtgtaagagttgtattgccacatgggagtgtacatgtatcaccactct 3756159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 130
Target Start/End: Original strand, 32728511 - 32728551
Alignment:
Q  90 ggtgtattgccacatggggtggtacatgtatcatcactctt 130  Q
    |||||||||||||||||||  |||||||||||| |||||||    
T  32728511 ggtgtattgccacatgggggtgtacatgtatcaccactctt 32728551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 426 - 466
Target Start/End: Original strand, 46990909 - 46990949
Alignment:
Q  426 aaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||| ||||||||||||||||||||||||||| ||| ||||    
T  46990909 aaaaaaaaatgatattcattcattcaaatcgatagagtaca 46990949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 48435559 - 48435487
Alignment:
Q  56 ttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgtatcatcactc 128  Q
    ||||||| |||||| ||||| ||| |||||||  | ||||||| |||||||||  |||||||||||| |||||    
T  48435559 ttgccacatgtcaggattttgtgtgggtgtaagagatgtattgtcacatgggggtgtacatgtatcaccactc 48435487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 106; Significance: 7e-53; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 21279994 - 21280123
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||| ||| |||||||    
T  21279994 tttggtaaattcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtgggtgtaaagggtatattgcc 21280093  T
Q  101 acatggggtggtacatgtatcatcactctt 130  Q
    ||||||||||||||||||||||||||||||    
T  21280094 acatggggtggtacatgtatcatcactctt 21280123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 7367614 - 7367743
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||| ||| |||||||| |||||||||||    
T  7367614 tttggtaagttcatctcacaaccacactttattttctatttatgtgggatccaggttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgcc 7367713  T
Q  101 acatggggtggtacatgtatcatcactctt 130  Q
    ||||||||||||||||||||||||| ||||    
T  7367714 acatggggtggtacatgtatcatcattctt 7367743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 24204022 - 24203895
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||| | |||||| ||||||||| |    
T  24204022 tttggtaagttcatctcacaaccacactttatattctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtggatgtaaagggtgtattgtc 24203923  T
Q  101 acatggggtggtacatgtatcatcactc 128  Q
    |||||| |||||||||||||||||||||    
T  24203922 acatggagtggtacatgtatcatcactc 24203895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 7273370 - 7273241
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||| ||||||||  ||||||| ||    
T  7273370 tttggtaagttcatctcacaatcacactttatcttctatttatgtggggtccaagttgccacgtgtcagaattttgtgtgggtgtaaagagtgtattacc 7273271  T
Q  101 acatggggtggtacatgtatcatcactctt 130  Q
    ||||||||||||||||| ||||||||||||    
T  7273270 acatggggtggtacatgcatcatcactctt 7273241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 7292812 - 7292933
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| | |  ||||||| |||||||||||    
T  7292812 tttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtttgtgtgtaaagggtgtattgcc 7292911  T
Q  101 acatggggtggtacatgtatca 122  Q
    ||||||||||||||||||||||    
T  7292912 acatggggtggtacatgtatca 7292933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 9698368 - 9698239
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||| | | |||||||| |||||||||||    
T  9698368 tttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaattttgtatgggtgtaaagggtgtattgcc 9698269  T
Q  101 acatggggtggtacatgtatcatcactctt 130  Q
    ||||| ||||||||||||||||| ||||||    
T  9698268 acatgaggtggtacatgtatcattactctt 9698239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 30736047 - 30736174
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||| |||| ||||||||||||||||||||| ||| | |||||| |||||||||||    
T  30736047 tttggtaagttcatctcacaatcacactttatcttctatttatgtggggtccaggttgccacgtgtcagaattttgtgtggatgtaaagggtgtattgcc 30736146  T
Q  101 acatggggtggtacatgtatcatcactc 128  Q
    ||||||| ||||||||||||||||||||    
T  30736147 acatgggatggtacatgtatcatcactc 30736174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 3213465 - 3213594
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||| ||||| ||||||||| |||||||||||||||| |||||| ||||  |||||||||||||||||||||||| |||||||| |||||||||||    
T  3213465 tttggtaaattcatttcacaaccatactttatcttctatttatgtggggtccagattgccacgtgtcagaattttatgtgggtgtaaagggtgtattgcc 3213564  T
Q  101 acatggggtggtacatgtatcatcactctt 130  Q
    |||||||||||||||||||||| |||||||    
T  3213565 acatggggtggtacatgtatcaccactctt 3213594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 26670044 - 26669923
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||| ||| |||||||| |||||||||||    
T  26670044 tttggtaagttcatctcacaaccacactttatcttctatttgtgtggagtccaggttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgcc 26669945  T
Q  101 acatggggtggtacatgtatca 122  Q
    ||||| |||||||||| |||||    
T  26669944 acatgaggtggtacatatatca 26669923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 21293712 - 21293584
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||| ||||| |||||||||||||||||||||||||| |||||| ||||  |||||||||||||||||||||||| |||||||| |||||||||||    
T  21293712 tttggtaaattcatttcacaaccacactttatcttctatttatgtggggtccagattgccacgtgtcagaattttatgtgggtgtaaagggtgtattgcc 21293613  T
Q  101 acatggggtggtacatgtatcatcactct 129  Q
    ||||| |||||||||||||||| ||||||    
T  21293612 acatgaggtggtacatgtatcaccactct 21293584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 13743256 - 13743130
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| || ||| |||||||| | | |||||||    
T  13743256 tttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaatcttgtgtgggtgtaaaggatatattgcc 13743157  T
Q  101 acatggggtggtacatgtatcatcact 127  Q
    |||| ||||||||||||||||| ||||    
T  13743156 acatagggtggtacatgtatcaccact 13743130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 13748756 - 13748630
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| || ||| |||||||| | | |||||||    
T  13748756 tttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaatcttgtgtgggtgtaaaggatatattgcc 13748657  T
Q  101 acatggggtggtacatgtatcatcact 127  Q
    |||| ||||||||||||||||| ||||    
T  13748656 acatagggtggtacatgtatcaccact 13748630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 30014408 - 30014534
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||| |||||||||||||||| | |||| |||||||| ||||||||||||||||| ||| | |||||| |||||||||||    
T  30014408 tttggtaagttcatctcacaaccatactttatcttctatttatatggggtccaagttaccacgtgtcagaattttgtgtggatgtaaagggtgtattgcc 30014507  T
Q  101 acatggggtggtacatgtatcatcact 127  Q
    |||||||||| ||||||||||||||||    
T  30014508 acatggggtgatacatgtatcatcact 30014534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 26466864 - 26466994
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| | || |||||||||| |||| ||||| | | |||||||| |||||||||||    
T  26466864 tttggtaagttcatctcacaaccacactttatcttctatttgtttggggttcaggttgccacgtatcaggattttgtatgggtgtaaaaggtgtattgcc 26466963  T
Q  101 acatggggtggtacatgtatcatcactcttg 131  Q
    |||| |||||||| |||||||||||||||||    
T  26466964 acatagggtggtaaatgtatcatcactcttg 26466994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 282 - 391
Target Start/End: Original strand, 31976431 - 31976540
Alignment:
Q  282 atgacaatattacacaccatgcataattttttcatttaattcttattgtttccttgaacaagataacacaacattactcgactcacacaacttcgacgtt 381  Q
    |||| |||| ||||| |||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||| ||    
T  31976431 atgataatactacactccatacattattttttcatttaattcttatcgtttccttgaacaagataacacaacattactcgactcatacaactttgacttt 31976530  T
Q  382 taatatattt 391  Q
    ||||||||||    
T  31976531 taatatattt 31976540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 4984343 - 4984385
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  4984343 caaaaataaaatgatattcattcattcaaatcgagagattaca 4984385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 25064537 - 25064495
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  25064537 caaaaataaaatgatattcattcattcaaatcgagagattaca 25064495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 8497269 - 8497227
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  8497269 caaaaacaaaatgatattcattcattcaaatcgagagattaca 8497227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 23947093 - 23947135
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  23947093 caaaaacaaaatgatattcattcattcaaatcgagagattaca 23947135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 27441662 - 27441736
Alignment:
Q  56 ttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgtatcatcactctt 130  Q
    ||||||| |||||| ||||||||| |||||||  ||||||||||||||||||   |||||||||||| |||||||    
T  27441662 ttgccacatgtcaggattttatgtgggtgtaagaggtgtattgccacatgggtgtgtacatgtatcaccactctt 27441736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 425 - 466
Target Start/End: Original strand, 7880879 - 7880920
Alignment:
Q  425 aaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  7880879 aaaaacaaaatgatattcattcattcaaatcgagagattaca 7880920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 424 - 464
Target Start/End: Complemental strand, 7028156 - 7028116
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagatta 464  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  7028156 caaaaacaaaatgatattcattcattcaaatcgagagatta 7028116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 33242523 - 33242595
Alignment:
Q  56 ttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgtatcatcactc 128  Q
    ||||||| |||||| ||||| ||| |||||||  |||||||||||||||||||  |||||||||||| |||||    
T  33242523 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatgggggtgtacatgtatcaccactc 33242595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 431 - 466
Target Start/End: Original strand, 8027901 - 8027936
Alignment:
Q  431 aaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||||||||||||||||||||||||||||||||||    
T  8027901 aaaatgatattcattcattcaaatcgagagattaca 8027936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 424 - 459
Target Start/End: Complemental strand, 12168979 - 12168944
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgaga 459  Q
    ||||||||||||||||||||||||||||||||||||    
T  12168979 caaaaataaaatgatattcattcattcaaatcgaga 12168944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 431 - 466
Target Start/End: Original strand, 17237069 - 17237104
Alignment:
Q  431 aaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||||||||||||||||||||||||||||||||||    
T  17237069 aaaatgatattcattcattcaaatcgagagattaca 17237104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 266 - 372
Target Start/End: Complemental strand, 31984572 - 31984465
Alignment:
Q  266 catttacgtctatgcaatgacaatattacacaccatgcataattttttcatttaattcttattgtttccttgaacaagataacacaaca-ttactcgact 364  Q
    |||||| ||| || || |||||||| ||||| ||||  |||||||||| ||||||||||||||| || |||| ||| |||| ||||||| |||||| |||    
T  31984572 catttatgtcgatacagtgacaatactacaccccatatataattttttgatttaattcttattgatttcttgtacatgatagcacaacatttactcaact 31984473  T
Q  365 cacacaac 372  Q
    || |||||    
T  31984472 catacaac 31984465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 12653245 - 12653203
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||| ||||||||||||||||    
T  12653245 caaaaacaaaatgatattcattcatttaaatcgagagattaca 12653203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 16419459 - 16419417
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  16419459 caaaaataaaatgatattcatttattcaaattgagagattaca 16419417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 35001891 - 35001849
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||||||||||||||||||||||| | ||||||||    
T  35001891 caaaaataaaatgatattcattcattcaaatcaaaagattaca 35001849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 424 - 457
Target Start/End: Original strand, 1450529 - 1450562
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcga 457  Q
    ||||||||||||||||||||||||||||||||||    
T  1450529 caaaaataaaatgatattcattcattcaaatcga 1450562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 425 - 466
Target Start/End: Original strand, 7875821 - 7875862
Alignment:
Q  425 aaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||| ||||||||||||||||||| ||||||||||||||||    
T  7875821 aaaaacaaaatgatattcattcatttaaatcgagagattaca 7875862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 424 - 464
Target Start/End: Complemental strand, 4088761 - 4088721
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagatta 464  Q
    |||||| |||||||||||||||||||||||| |||||||||    
T  4088761 caaaaacaaaatgatattcattcattcaaattgagagatta 4088721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 424 - 464
Target Start/End: Original strand, 12059549 - 12059589
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagatta 464  Q
    |||||||||||||||||||||||||| ||||| ||||||||    
T  12059549 caaaaataaaatgatattcattcatttaaatcaagagatta 12059589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 426 - 466
Target Start/End: Complemental strand, 17335052 - 17335012
Alignment:
Q  426 aaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||| ||||| ||||||||||||||||||||||||||||||    
T  17335052 aaaaaaaaatcatattcattcattcaaatcgagagattaca 17335012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 425 - 464
Target Start/End: Complemental strand, 20619721 - 20619682
Alignment:
Q  425 aaaaataaaatgatattcattcattcaaatcgagagatta 464  Q
    ||||||||||||||||||||||||| ||||| ||||||||    
T  20619721 aaaaataaaatgatattcattcatttaaatcaagagatta 20619682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 160
Target Start/End: Original strand, 31975953 - 31975984
Alignment:
Q  129 ttgacaagttcaaaataagtatacttctttat 160  Q
    ||||||||||||||||||||||||||||||||    
T  31975953 ttgacaagttcaaaataagtatacttctttat 31975984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 606501 - 606459
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||| ||| ||||    
T  606501 caaaaacaaaatgatattcattcattcaaatcgatagagtaca 606459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 3913367 - 3913409
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||||||||| |||||||||||||||||||||| ||| ||||    
T  3913367 caaaaataaaacgatattcattcattcaaatcgatagagtaca 3913409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 4468853 - 4468811
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||| |||||||||| |||||    
T  4468853 caaaaacaaaatgatattcattcatttaaatcgagagtttaca 4468811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 462
Target Start/End: Complemental strand, 10228982 - 10228945
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagat 462  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  10228982 caaaaataaaatgat-ttcattcattcaaatcgagagat 10228945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 454
Target Start/End: Original strand, 34185487 - 34185517
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaat 454  Q
    |||||||||||||||||||||||||||||||    
T  34185487 caaaaataaaatgatattcattcattcaaat 34185517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 437 - 466
Target Start/End: Original strand, 8196196 - 8196225
Alignment:
Q  437 atattcattcattcaaatcgagagattaca 466  Q
    ||||||||||||||||||||||||||||||    
T  8196196 atattcattcattcaaatcgagagattaca 8196225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 33254034 - 33254107
Alignment:
Q  56 ttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgtatcatcactct 129  Q
    ||||||| |||| | ||||| ||| ||| |||| ||||||||||||||||| |  |||||||||||| ||||||    
T  33254034 ttgccacatgtccggattttgtgtgggtataaaaggtgtattgccacatggaggtgtacatgtatcaccactct 33254107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 466
Target Start/End: Complemental strand, 34489501 - 34489460
Alignment:
Q  425 aaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||| ||||||||||| ||||||||||||||| ||||||||    
T  34489501 aaaaacaaaatgatatttattcattcaaatcgatagattaca 34489460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 425 - 457
Target Start/End: Complemental strand, 30894894 - 30894862
Alignment:
Q  425 aaaaataaaatgatattcattcattcaaatcga 457  Q
    |||||||||| ||||||||||||||||||||||    
T  30894894 aaaaataaaacgatattcattcattcaaatcga 30894862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 102; Significance: 2e-50; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 5015460 - 5015581
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||  ||||||| |||||||||||    
T  5015460 tttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtgagtgtaaaaggtgtattgcc 5015559  T
Q  101 acatggggtggtacatgtatca 122  Q
    ||||||||||||||||||||||    
T  5015560 acatggggtggtacatgtatca 5015581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 16180392 - 16180263
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||| | |||||| |||||||||||    
T  16180392 tttggtaaattcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtgtggatgtaaaaggtgtattgcc 16180293  T
Q  101 acatggggtggtacatgtatcatcactctt 130  Q
    ||||||||||||||||||||||||||||||    
T  16180292 acatggggtggtacatgtatcatcactctt 16180263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 5810959 - 5810830
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||| | | |||||||| |||||||||||    
T  5810959 tttgataagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacatgtcaaaattttgtatgggtgtaaagggtgtattgcc 5810860  T
Q  101 acatggggtggtacatgtatcatcactctt 130  Q
    ||||||||||||||||||||||||||||||    
T  5810859 acatggggtggtacatgtatcatcactctt 5810830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 44326243 - 44326372
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||  |||||||||||||||||||||||| |||||||| |||||||||||    
T  44326243 tttggtaagttcatctcacaaccacactttatcatctatttatgtgggatccagattgccacgtgtcagaattttatgtgggtgtaaagggtgtattgcc 44326342  T
Q  101 acatggggtggtacatgtatcatcactctt 130  Q
    |||||| ||||||||||||||| |||||||    
T  44326343 acatggtgtggtacatgtatcaccactctt 44326372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 42972917 - 42973045
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  42972917 tttggtaagttcatctcacaaccacattttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtgggtgtaaatggtgtattgcc 42973016  T
Q  101 acatggggtggtacatgtatcatcactct 129  Q
    |||| || | ||||||||||||| |||||    
T  42973017 acataggatagtacatgtatcattactct 42973045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 44416969 - 44416841
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||| | |||||| |||||||||||    
T  44416969 tttgataagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaaatttgtgtggatgtaaaaggtgtattgcc 44416870  T
Q  101 acatggggtggtacatgtatcatcactct 129  Q
    ||||| |||||||||||||||||||||||    
T  44416869 acatgaggtggtacatgtatcatcactct 44416841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 32029852 - 32029725
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||| ||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||| |||||||| |||||||||||    
T  32029852 tttggtaaattcatctaacaaccacactttatcttctatttatgtggggtccaagttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgcc 32029753  T
Q  101 acatggggtggtacatgtatcatcactc 128  Q
    ||||||||||||||||||||||| ||||    
T  32029752 acatggggtggtacatgtatcatgactc 32029725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 43343659 - 43343532
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||| | |||||| |||||||||||    
T  43343659 tttgataagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaaatttgtgtggatgtaaaaggtgtattgcc 43343560  T
Q  101 acatggggtggtacatgtatcatcactc 128  Q
    ||||| ||||||||||||||||||||||    
T  43343559 acatgaggtggtacatgtatcatcactc 43343532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 24001047 - 24000919
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||| | | |||||||| |||||||||||    
T  24001047 tttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaattttgtatgggtgtaaagggtgtattgcc 24000948  T
Q  101 acatggggtggtacatgtatcatcactct 129  Q
    ||||| ||||||||||||||||| |||||    
T  24000947 acatgaggtggtacatgtatcattactct 24000919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 42538466 - 42538339
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||| | | |||||||| |||||||||||    
T  42538466 tttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaattttgtatgggtgtaaagggtgtattgcc 42538367  T
Q  101 acatggggtggtacatgtatcatcactc 128  Q
    ||||| ||||||||||||||||| ||||    
T  42538366 acatgaggtggtacatgtatcattactc 42538339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 5 - 125
Target Start/End: Complemental strand, 27393291 - 27393171
Alignment:
Q  5 gtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacat 104  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||| |||||| | |||||||||||||||| |||||||| | |||||||||||||    
T  27393291 gtaagttcatctcacaaccacactttatcttctatttatgtggggtccaggttgcctcatgtcagaattttatgtgggtgtaaaggatgtattgccacat 27393192  T
Q  105 ggggtggtacatgtatcatca 125  Q
    |||||||||||||||||||||    
T  27393191 ggggtggtacatgtatcatca 27393171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 26898437 - 26898310
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||| |||| ||| ||||||||||||||||||||| |||||||| |||||||||||    
T  26898437 tttggtaagttcatcttacaaccacactttatattctatttgtgtggggtccaggttaccacgtgtcagaattttatgtgggtgtaaaaggtgtattgcc 26898338  T
Q  101 acatggggtggtacatgtatcatcactc 128  Q
    |||| || |||||||||||||| |||||    
T  26898337 acataggatggtacatgtatcaccactc 26898310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 41861741 - 41861868
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||| | | |||||||| |||||||||||    
T  41861741 tttggtaagtttatctcacaaccacactttatcttctatttgtatggggtccaggttgccacgtgtcagaattttgtatgggtgtaaagggtgtattgcc 41861840  T
Q  101 acatggggtggtacatgtatcatcactc 128  Q
    |||||| ||||||||||||||| |||||    
T  41861841 acatggagtggtacatgtatcaccactc 41861868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 35069786 - 35069915
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||| ||| | |||||| | | |||||||    
T  35069786 tttggtaagttcatctcacaaccacactttatcttctatttatgtgaggtccaagttgccacgtgtcagaattttgtgtagatgtaaaggatatattgcc 35069885  T
Q  101 acatggggtggtacatgtatcatcactctt 130  Q
    |||| || ||||||||||||||||||||||    
T  35069886 acataggatggtacatgtatcatcactctt 35069915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 45326085 - 45326214
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||| ||||   | |||| |||||||||||||||| |||||||||||||||||| |    
T  45326085 tttggtaagttcatctcacaatcacactttatcttctatttatgtggggtccagactaccacctgtcagaattttatgtgggtgtaaatggtgtattgtc 45326184  T
Q  101 acatggggtggtacatgtatcatcactctt 130  Q
    |||||||||||||||||||||| |||||||    
T  45326185 acatggggtggtacatgtatcaccactctt 45326214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 9216366 - 9216497
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |  |||||||| | |||||||||||| ||| | |||||| ||||||||| |    
T  9216366 tttggtaagttcatctcacaaccacattttatcttctatttgtgtggggtttaagttgccgcatgtcagaattttgtgtggatgtaaaaggtgtattgtc 9216465  T
Q  101 acatggggtggtacatgtatcatcactcttga 132  Q
    ||||||||||||| || ||||||| |||||||    
T  9216466 acatggggtggtatatatatcatccctcttga 9216497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 38160610 - 38160505
Alignment:
Q  5 gtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacat 104  Q
    |||| ||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||| ||| |||||||  |||||||||||||||    
T  38160610 gtaacttcatctcacaactacactttatcttctatttatgtggggtccaagttgccacgtgtcagaattttgtgtgggtgtaaggggtgtattgccacat 38160511  T
Q  105 ggggtg 110  Q
    ||||||    
T  38160510 ggggtg 38160505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 4638234 - 4638106
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| || | ||| |||||||||||||| || | | | |||||| ||||||||| |    
T  4638234 tttggtaagttcatctcacaaccatactttatcttctatttgtgtggggtctaggttaccacgtgtcagaatcttgtatggatgtaaagggtgtattgtc 4638135  T
Q  101 acatggggtggtacatgtatcatcactct 129  Q
    || | ||||||||||||||||| ||||||    
T  4638134 acgtagggtggtacatgtatcaccactct 4638106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 10573814 - 10573941
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||| || |  ||||||| | |||||||||||||| |||||||| | | ||||| |    
T  10573814 tttggtaaattcatctcacaaccacactttatcttctatttatgtggggtcaagattgccacatatcagaattttatgtgggtgtaaaggatatattgtc 10573913  T
Q  101 acatggggtggtacatgtatcatcactc 128  Q
    ||||| |||||||||||||||| |||||    
T  10573914 acatgcggtggtacatgtatcaccactc 10573941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 47279744 - 47279630
Alignment:
Q  16 tcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtaca 115  Q
    |||||||||||||||||||||||||| | | |||||||  || |||| | |||||||||||||| ||| |||| ||||||||| || ||||| |||||||    
T  47279744 tcacaaccacactttatcttctatttatataggatccagattaccacatatcagaattttatgtgggtataaagggtgtattgtcagatgggatggtaca 47279645  T
Q  116 tgtatcatcactctt 130  Q
    ||||||| |||||||    
T  47279644 tgtatcaccactctt 47279630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 43317508 - 43317635
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||| ||| |||||||||||| |||||||  ||||||||||||||||| || |  ||||||| |||||||||||| ||| |||||||  |||||||||||    
T  43317508 tttgataaattcatctcacaatcacacttactcttctatttgtgtggggtctagattgccacatgtcagaattttgtgtgggtgtaaggggtgtattgcc 43317607  T
Q  101 acatggggtggtacatgtatcatcactc 128  Q
    |||   ||  |||||||||||| |||||    
T  43317608 acacaagggtgtacatgtatcaccactc 43317635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 24280631 - 24280557
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaatttt 75  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||| ||||||||||||  | ||||||||||    
T  24280631 tttggtaaattcatctcacaatcacactttctcttctatttgtgtggggtccaagttgccatatatcagaatttt 24280557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 1485032 - 1485074
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  1485032 caaaaataaaatgatattcattcattcaaatcgagagattaca 1485074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 433467 - 433509
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  433467 caaaaataaaaagatattcattcattcaaatcgagagattaca 433509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 2843017 - 2843059
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  2843017 caaaaataaaatgatattcattcattcaaattgagagattaca 2843059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 5194266 - 5194164
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||| ||| |||||||||||| |||||||  ||||||||||||||||| || |  ||||||| ||||| |||||| ||| |||||||  | |||||||||    
T  5194266 tttgataaattcatctcacaatcacacttactcttctatttgtgtggggtctagattgccacatgtcaaaattttgtgtgggtgtaagggttgtattgcc 5194167  T
Q  101 aca 103  Q
    |||    
T  5194166 aca 5194164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 14627674 - 14627716
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  14627674 caaaaacaaaatgatattcattcattcaaatcgagagattaca 14627716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 26492666 - 26492624
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  26492666 caaaaacaaaatgatattcattcattcaaatcgagagattaca 26492624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 26584011 - 26583969
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  26584011 caaaaataaaatgatattcattcattcaaatcgtgagattaca 26583969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 31408613 - 31408539
Alignment:
Q  56 ttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgtatcatcactctt 130  Q
    ||||||| |||||| ||||||||| |||||||  ||||||||| |||||||||  |||||||||||| |||||||    
T  31408613 ttgccacatgtcaggattttatgtgggtgtaagaggtgtattgtcacatgggggtgtacatgtatcaccactctt 31408539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 34774012 - 34773970
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  34774012 caaaaacaaaatgatattcattcattcaaatcgagagattaca 34773970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 42066838 - 42066880
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  42066838 caaaaacaaaatgatattcattcattcaaatcgagagattaca 42066880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 45198809 - 45198851
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  45198809 caaaaacaaaatgatattcattcattcaaatcgagagattaca 45198851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 425 - 466
Target Start/End: Original strand, 22927647 - 22927688
Alignment:
Q  425 aaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  22927647 aaaaataaaatgatattcattaattcaaatcgagagattaca 22927688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 56 - 129
Target Start/End: Original strand, 40237039 - 40237112
Alignment:
Q  56 ttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgtatcatcactct 129  Q
    ||||||| |||||| ||||| ||| |||||||  |||||||||||||||||||  |||||||||||| ||||||    
T  40237039 ttgccacatgtcaggattttgtgtgggtgtaagaggtgtattgccacatgggggtgtacatgtatcaccactct 40237112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 424 - 464
Target Start/End: Original strand, 12502028 - 12502068
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagatta 464  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  12502028 caaaaacaaaatgatattcattcattcaaatcgagagatta 12502068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 424 - 464
Target Start/End: Original strand, 12527662 - 12527702
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagatta 464  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  12527662 caaaaacaaaatgatattcattcattcaaatcgagagatta 12527702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 424 - 463
Target Start/End: Complemental strand, 19560297 - 19560258
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagatt 463  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  19560297 caaaaataaaatgatattcattcatttaaatcgagagatt 19560258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 431 - 466
Target Start/End: Complemental strand, 20116875 - 20116840
Alignment:
Q  431 aaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||||||||||||||||||||||||||||||||||    
T  20116875 aaaatgatattcattcattcaaatcgagagattaca 20116840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 23085822 - 23085780
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||| ||||| ||||||||||||||||||||||||    
T  23085822 caaaaataaaattatattgattcattcaaatcgagagattaca 23085780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 32684969 - 32684927
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||||||| ||||    
T  32684969 caaaaacaaaatgatattcattcattcaaatcgagagactaca 32684927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 35495951 - 35495993
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||| ||||||||||||||||||||||    
T  35495951 caaaaacaaaatgatattcaatcattcaaatcgagagattaca 35495993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 46822316 - 46822274
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||| ||||||||||||||||||||||||    
T  46822316 caaaaacaaaatgatattaattcattcaaatcgagagattaca 46822274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 433 - 466
Target Start/End: Original strand, 7640560 - 7640593
Alignment:
Q  433 aatgatattcattcattcaaatcgagagattaca 466  Q
    ||||||||||||||||||||||||||||||||||    
T  7640560 aatgatattcattcattcaaatcgagagattaca 7640593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 424 - 461
Target Start/End: Complemental strand, 21266693 - 21266656
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagaga 461  Q
    |||||| |||||||||||||||||||||||||||||||    
T  21266693 caaaaacaaaatgatattcattcattcaaatcgagaga 21266656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 425 - 466
Target Start/End: Complemental strand, 42311578 - 42311537
Alignment:
Q  425 aaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||| ||||||||||||||| ||||||||||||||||||||    
T  42311578 aaaaacaaaatgatattcatttattcaaatcgagagattaca 42311537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 424 - 464
Target Start/End: Original strand, 1448608 - 1448648
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagatta 464  Q
    |||||| ||||||||||||||||||||||||||||| ||||    
T  1448608 caaaaacaaaatgatattcattcattcaaatcgagatatta 1448648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 425 - 457
Target Start/End: Complemental strand, 37849139 - 37849107
Alignment:
Q  425 aaaaataaaatgatattcattcattcaaatcga 457  Q
    |||||||||||||||||||||||||||||||||    
T  37849139 aaaaataaaatgatattcattcattcaaatcga 37849107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 23425149 - 23425191
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||  ||||||||||    
T  23425149 caaaaacaaaatgatattcattcattcaaattaagagattaca 23425191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 454
Target Start/End: Original strand, 24610052 - 24610082
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaat 454  Q
    |||||||||||||||||||||||||||||||    
T  24610052 caaaaataaaatgatattcattcattcaaat 24610082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 32521705 - 32521747
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||||||||| ||||||||||||||||||||||  |||||||    
T  32521705 caaaaataaaacgatattcattcattcaaatcgatggattaca 32521747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 424 - 464
Target Start/End: Complemental strand, 6559178 - 6559138
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagatta 464  Q
    |||||| ||||||||||||||||||| |||| |||||||||    
T  6559178 caaaaacaaaatgatattcattcatttaaattgagagatta 6559138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 425 - 461
Target Start/End: Original strand, 35667009 - 35667045
Alignment:
Q  425 aaaaataaaatgatattcattcattcaaatcgagaga 461  Q
    ||||| ||||||||||||||||||||||||| |||||    
T  35667009 aaaaacaaaatgatattcattcattcaaatcaagaga 35667045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 102; Significance: 2e-50; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 7617198 - 7617327
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||| |||||||||||| |||||||||||| |||||||||||    
T  7617198 tttggtaagttcatctcacaaccacactttatcttctatttatgtgggatctaagttgtcacatgtcagaattttgtgttggtgtaaaaggtgtattgcc 7617297  T
Q  101 acatggggtggtacatgtatcatcactctt 130  Q
    |||||||||| |||||||||||||||||||    
T  7617298 acatggggtgatacatgtatcatcactctt 7617327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 5 - 128
Target Start/End: Original strand, 18034051 - 18034174
Alignment:
Q  5 gtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacat 104  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| | |||||||| |||||||||||| ||    
T  18034051 gtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttatatgggtgtaaagggtgtattgccatat 18034150  T
Q  105 ggggtggtacatgtatcatcactc 128  Q
    ||||||||||||||||||||||||    
T  18034151 ggggtggtacatgtatcatcactc 18034174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 41334698 - 41334571
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| | | |||||||| |||||||||||    
T  41334698 tttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtatgggtgtaaagggtgtattgcc 41334599  T
Q  101 acatggggtggtacatgtatcatcactc 128  Q
    |||||||||||||||||||||| |||||    
T  41334598 acatggggtggtacatgtatcaccactc 41334571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 5 - 129
Target Start/End: Original strand, 33801538 - 33801662
Alignment:
Q  5 gtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacat 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||  ||||||||||||||    
T  33801538 gtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttgtgtgggtgtaaagagtgtattgccacat 33801637  T
Q  105 ggggtggtacatgtatcatcactct 129  Q
    |||  ||||||| ||||||||||||    
T  33801638 gggaaggtacatatatcatcactct 33801662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 2614684 - 2614556
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||| | | |||||||| |||||||||||    
T  2614684 tttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcagaattttgtatgggtgtaaagggtgtattgcc 2614585  T
Q  101 acatggggtggtacatgtatcatcactct 129  Q
    ||||| ||||||||||||||||| |||||    
T  2614584 acatgaggtggtacatgtatcattactct 2614556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 5257060 - 5257188
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||| || |  ||||||| |||||||||||||||| |||||||| |||||||||||    
T  5257060 tttggtaatttcatctcacaaccacactttatcttctatttatgtggggtcaagattgccacatgtcagaattttatgtgggtgtaaagggtgtattgcc 5257159  T
Q  101 acatggggtggtacatgtatcatcactct 129  Q
    |||||||||||||||||||||| ||||||    
T  5257160 acatggggtggtacatgtatcaccactct 5257188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 22512370 - 22512472
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| | |||||| |||||||||||    
T  22512370 tttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccaagttgccacgtgtcagaattttgtgtggatgtaaagggtgtattgcc 22512469  T
Q  101 aca 103  Q
    |||    
T  22512470 aca 22512472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 30 - 130
Target Start/End: Complemental strand, 25915002 - 25914902
Alignment:
Q  30 tatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgtatcatcactct 129  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  25915002 tatcttctatttgtgtggggtccaggttgccacgtgtcagaattttgtgtgggtgtaaatggtgtattgccacatgaggtggtacatgtatcatcactct 25914903  T
Q  130 t 130  Q
    |    
T  25914902 t 25914902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 38470644 - 38470765
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||| ||||| |||||| ||||||||||||||||||| |||||| ||||  || |||||| |||||||||||||| |||||||| |||||||||||    
T  38470644 tttggtaaattcatttcacaatcacactttatcttctatttatgtggggtccagattaccacgtatcagaattttatgtgggtgtaaagggtgtattgcc 38470743  T
Q  101 acatggggtggtacatgtatca 122  Q
    | ||| ||||||||||||||||    
T  38470744 atatgaggtggtacatgtatca 38470765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 39122369 - 39122262
Alignment:
Q  23 cacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgtatca 122  Q
    |||||||||||||||||||||||||| |  | |||||||| ||||||||| || ||| | |||||||| | ||||| |||||||||||||||||||||||    
T  39122369 cacactttatcttctatttgtgtggggtttaggttgccacatgtcagaatcttgtgtggatgtaaatgatatattgtcacatggggtggtacatgtatca 39122270  T
Q  123 tcactctt 130  Q
     |||||||    
T  39122269 ccactctt 39122262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 39122468 - 39122366
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||| |  | |||||||| ||||||||| || ||| | |||||||| | ||||| |    
T  39122468 tttggtaaattcatctcacaactacactttatcttctatttgtgtggggtttaggttgccacatgtcagaatcttgtgtggatgtaaatgatatattgtc 39122369  T
Q  101 aca 103  Q
    |||    
T  39122368 aca 39122366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 7242087 - 7242045
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  7242087 caaaaataaaatgatattcattcattcaaatcgagagattaca 7242045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 7247262 - 7247220
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  7247262 caaaaataaaatgatattcattcattcaaatcgagagattaca 7247220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 10649945 - 10649903
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  10649945 caaaaataaaatgatattcattcattcaaatcgagagattaca 10649903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 19280713 - 19280755
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  19280713 caaaaataaaatgatattcattcattcaaatcgagagattaca 19280755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 424 - 464
Target Start/End: Original strand, 7150111 - 7150151
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagatta 464  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  7150111 caaaaataaaatgatattcattcattcaaatcgagagatta 7150151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 426 - 466
Target Start/End: Original strand, 8771959 - 8771999
Alignment:
Q  426 aaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  8771959 aaaataaaatgatattcattcattcaaatcgagagattaca 8771999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 781691 - 781649
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  781691 caaaaacaaaatgatattcattcattcaaatcgagagattaca 781649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 18677242 - 18677284
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  18677242 caaaaacaaaatgatattcattcattcaaatcgagagattaca 18677284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 21060059 - 21060101
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  21060059 caaaaacaaaatgatattcattcattcaaatcgagagattaca 21060101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 34882020 - 34881978
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  34882020 caaaaacaaaatgatattcattcattcaaatcgagagattaca 34881978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 425 - 466
Target Start/End: Original strand, 35475115 - 35475156
Alignment:
Q  425 aaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  35475115 aaaaataaaatgatattcattcattcaaattgagagattaca 35475156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 30622699 - 30622627
Alignment:
Q  56 ttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgtatcatcactc 128  Q
    ||||||| ||||| |||||| ||| |||||||  |||||||||||||||||||  |||||||||||| |||||    
T  30622699 ttgccacatgtcaaaattttgtgtgggtgtaagaggtgtattgccacatgggggtgtacatgtatcaccactc 30622627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 424 - 464
Target Start/End: Complemental strand, 43149030 - 43148990
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagatta 464  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  43149030 caaaaatacaatgatattcattcattcaaatcgagagatta 43148990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 56 - 127
Target Start/End: Complemental strand, 32473374 - 32473303
Alignment:
Q  56 ttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgtatcatcact 127  Q
    ||||||| |||||||||||| ||| |||||||  ||||||||||||||||| |  |||||||||||| ||||    
T  32473374 ttgccacatgtcagaattttgtgtgggtgtaagaggtgtattgccacatggaggtgtacatgtatcaccact 32473303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 3271178 - 3271220
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||| ||||||||||||||||||||||||||    
T  3271178 caaaaacaaaatgataatcattcattcaaatcgagagattaca 3271220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 4954295 - 4954253
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||||||| |||||||| ||||||||||||||||||||||||    
T  4954295 caaaaataagatgatatttattcattcaaatcgagagattaca 4954253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 16981595 - 16981553
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||||||||||||| ||||||||||||| ||||||    
T  16981595 caaaaataaaatgatattcatttattcaaatcgagatattaca 16981553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 432 - 466
Target Start/End: Complemental strand, 27752220 - 27752186
Alignment:
Q  432 aaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||||||||||||||||||||||||||    
T  27752220 aaatgatattcattcattcaaatcgagagattaca 27752186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 30371924 - 30371882
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| |||||||||||||||||||||||| |||||||||||    
T  30371924 caaaaacaaaatgatattcattcattcaaatagagagattaca 30371882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 41184217 - 41184259
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| |||||||||| |||||||||||||||||||||||||    
T  41184217 caaaaacaaaatgatatgcattcattcaaatcgagagattaca 41184259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 43008091 - 43008133
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||| ||||||||||||||||||||||||||||||    
T  43008091 caaaaacaaaataatattcattcattcaaatcgagagattaca 43008133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 424 - 457
Target Start/End: Original strand, 36057104 - 36057137
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcga 457  Q
    ||||||||||||||||||||||||||||||||||    
T  36057104 caaaaataaaatgatattcattcattcaaatcga 36057137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 424 - 464
Target Start/End: Complemental strand, 30299147 - 30299107
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagatta 464  Q
    |||||||||||||||||||||||||| ||||||||| ||||    
T  30299147 caaaaataaaatgatattcattcatttaaatcgagatatta 30299107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 424 - 455
Target Start/End: Original strand, 2057610 - 2057641
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatc 455  Q
    ||||||||||||||||||||||||||||||||    
T  2057610 caaaaataaaatgatattcattcattcaaatc 2057641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 454
Target Start/End: Original strand, 11073781 - 11073811
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaat 454  Q
    |||||||||||||||||||||||||||||||    
T  11073781 caaaaataaaatgatattcattcattcaaat 11073811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 14726254 - 14726296
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| |||| |||||||||||||||||||||| ||||||||    
T  14726254 caaaaacaaaacgatattcattcattcaaatcgatagattaca 14726296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 19259588 - 19259630
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||| || |||||||||||||||||||||    
T  19259588 caaaaacaaaatgatatttatccattcaaatcgagagattaca 19259630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 27266635 - 27266677
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| |||||| ||||| |||||||||||||||||||||||    
T  27266635 caaaaacaaaatggtattcgttcattcaaatcgagagattaca 27266677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 466
Target Start/End: Complemental strand, 38007652 - 38007610
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| |||| |||||||||||||||||||||| ||||||||    
T  38007652 caaaaacaaaacgatattcattcattcaaatcgatagattaca 38007610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 457
Target Start/End: Complemental strand, 26825725 - 26825692
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcga 457  Q
    ||||||||||| ||||||||||||||||||||||    
T  26825725 caaaaataaaacgatattcattcattcaaatcga 26825692  T

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Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 437 - 466
Target Start/End: Complemental strand, 42580178 - 42580149
Alignment:
Q  437 atattcattcattcaaatcgagagattaca 466  Q
    ||||||||||||||||||||||||||||||    
T  42580178 atattcattcattcaaatcgagagattaca 42580149  T

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Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 424 - 464
Target Start/End: Complemental strand, 35851092 - 35851052
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagatta 464  Q
    |||||| ||||||||||||||||||||||||| | ||||||    
T  35851092 caaaaacaaaatgatattcattcattcaaatcaatagatta 35851052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 425 - 461
Target Start/End: Original strand, 43261649 - 43261685
Alignment:
Q  425 aaaaataaaatgatattcattcattcaaatcgagaga 461  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  43261649 aaaaacaaaatgatattcattcatttaaatcgagaga 43261685  T

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Target: scaffold0038 (Bit Score: 98; Significance: 4e-48; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 112720 - 112849
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||| |||||| | | |||||||| |||||||||||    
T  112720 tttggtaagttcatctcacaaccacactttatcttctatttgtgtggggtccagattgccacgtgtcaaaattttgtatgggtgtaaagggtgtattgcc 112819  T
Q  101 acatggggtggtacatgtatcatcactctt 130  Q
    ||||||||||||||||||||||||||||||    
T  112820 acatggggtggtacatgtatcatcactctt 112849  T

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Target: scaffold0385 (Bit Score: 96; Significance: 7e-47; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 11316 - 11443
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||| ||||||||||||||| ||| ||||||||| ||||||||||    
T  11316 tttggtaagttcatctcacaaccacactttatcttctattgatgtggggtccaagttgctacgtgtcagaattttgtgtaggtgtaaatagtgtattgcc 11415  T
Q  101 acatggggtggtacatgtatcatcactc 128  Q
    ||||||| ||||||||||||||||||||    
T  11416 acatgggatggtacatgtatcatcactc 11443  T

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Target: scaffold0187 (Bit Score: 96; Significance: 7e-47; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 5 - 128
Target Start/End: Complemental strand, 14219 - 14097
Alignment:
Q  5 gtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacat 104  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||| | |||||| |||||||||||||||    
T  14219 gtaagttcatctcacaaccacactttatcttctatttgtgtggg-tccaggttgccacgtgtcagaattttgtgtggatgtaaagggtgtattgccacat 14121  T
Q  105 ggggtggtacatgtatcatcactc 128  Q
    ||||||||||||||||||||||||    
T  14120 ggggtggtacatgtatcatcactc 14097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 5 - 128
Target Start/End: Complemental strand, 24547 - 24425
Alignment:
Q  5 gtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacat 104  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||| | |||||| |||||||||||||||    
T  24547 gtaagttcatctcacaaccacactttatcttctatttgtgtggg-tccaggttgccacgtgtcagaattttgtgtggatgtaaagggtgtattgccacat 24449  T
Q  105 ggggtggtacatgtatcatcactc 128  Q
    ||||||||||||||||||||||||    
T  24448 ggggtggtacatgtatcatcactc 24425  T

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Target: scaffold0119 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 750 - 871
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||| ||| |||||||| |||||||||||    
T  750 tttggtaagttcatctcacaaccacactttatcttctatttgtgtggagtccaggttgccacgtgtcagaattttgtgtgggtgtaaagggtgtattgcc 849  T
Q  101 acatggggtggtacatgtatca 122  Q
    ||||| |||||||||| |||||    
T  850 acatgaggtggtacatatatca 871  T

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Target: scaffold0157 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 23456 - 23329
Alignment:
Q  1 tttggtaagttcatctcacaaccacactttatcttctatttgtgtgggatccaagttgccacgtgtcagaattttatgttggtgtaaatggtgtattgcc 100  Q
    |||||||||||||||| |||| |||||||||||||||||||||||| | | ||| ||||||||||| |||||||| ||| ||||||||  |||||||| |    
T  23456 tttggtaagttcatcttacaatcacactttatcttctatttgtgtgaggttcaatttgccacgtgttagaattttgtgtgggtgtaaaacgtgtattgtc 23357  T
Q  101 acatggggtggtacatgtatcatcactc 128  Q
    |||||||||||| |||||||||| ||||    
T  23356 acatggggtggtgcatgtatcattactc 23329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 45699 - 45625
Alignment:
Q  56 ttgccacgtgtcagaattttatgttggtgtaaatggtgtattgccacatggggtggtacatgtatcatcactctt 130  Q
    ||||||| |||||| ||||||||| |||||||  ||||||||||||||||||   |||||||||||| |||||||    
T  45699 ttgccacatgtcaggattttatgtgggtgtaagaggtgtattgccacatgggtgtgtacatgtatcaccactctt 45625  T

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Target: scaffold0003; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 361575 - 361617
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||||||||||||||||||||||||| || |||||||||||    
T  361575 caaaaataaaatgatattcattcattcatattgagagattaca 361617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 431 - 466
Target Start/End: Complemental strand, 8985 - 8950
Alignment:
Q  431 aaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||||||||||||||||||||||||||||||||||    
T  8985 aaaatgatattcattcattcaaatcgagagattaca 8950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 83213 - 83255
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||| ||||||||||    
T  83213 caaaaacaaaatgatattcattcattcaaatcaagagattaca 83255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 201149 - 201191
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| ||||||||||||||||||||||||||| ||||||||    
T  201149 caaaaacaaaatgatattcattcattcaaatcgatagattaca 201191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 425 - 466
Target Start/End: Complemental strand, 6582 - 6541
Alignment:
Q  425 aaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||||||||| ||||| ||||||||||||||||||||||||    
T  6582 aaaaataaaataatattaattcattcaaatcgagagattaca 6541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 462
Target Start/End: Complemental strand, 5701 - 5664
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagat 462  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  5701 caaaaataaaatgat-ttcattcattcaaatcgagagat 5664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 16096 - 16138
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaatcgagagattaca 466  Q
    |||||| |||||||||||||||||||||||| |||| ||||||    
T  16096 caaaaacaaaatgatattcattcattcaaattgagatattaca 16138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 424 - 454
Target Start/End: Complemental strand, 93413 - 93383
Alignment:
Q  424 caaaaataaaatgatattcattcattcaaat 454  Q
    |||||||||||||||||||||||||||||||    
T  93413 caaaaataaaatgatattcattcattcaaat 93383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 466
Target Start/End: Complemental strand, 4501 - 4464
Alignment:
Q  429 ataaaatgatattcattcattcaaatcgagagattaca 466  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  4501 ataaaatgatattcattcatttaaatcaagagattaca 4464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 424 - 452
Target Start/End: Original strand, 71093 - 71121
Alignment:
Q  424 caaaaataaaatgatattcattcattcaa 452  Q
    |||||||||||||||||||||||||||||    
T  71093 caaaaataaaatgatattcattcattcaa 71121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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