View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11746_high_27 (Length: 352)
Name: NF11746_high_27
Description: NF11746
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11746_high_27 |
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Alignment Details
Target: chr6 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 116 - 331
Target Start/End: Original strand, 22219030 - 22219245
Alignment:
| Q |
116 |
actaataggtaatgatagacatatcatagcaaaattaaacacattcattagaggaccttaaggattctgttccattttcaatattaccaatcttcacact |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
22219030 |
actaataggtaatgatagacatatcatagcaaaattaaacatattcattagaggaccttaaggattctgttccattttcaatattacgaatcttcacact |
22219129 |
T |
|
| Q |
216 |
tgaggttttcaaacaagagagcaaaccttttagaaagaaagagtgtacatggctgaacgattagcaagaaacttcacatgcttgttatcttggtatgttt |
315 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
22219130 |
tgaggttttcaaacaagagagctaaccttttagaaagaaagagtgtacatggctgaacgattagcaagaaacttcacatgcttgttatctcggtatgttt |
22219229 |
T |
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| Q |
316 |
tggcccatgcattcat |
331 |
Q |
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|||||||||||||||| |
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| T |
22219230 |
tggcccatgcattcat |
22219245 |
T |
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