View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11746_high_7 (Length: 689)

Name: NF11746_high_7
Description: NF11746
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11746_high_7
NF11746_high_7
[»] chr6 (26 HSPs)
chr6 (515-599)||(26259853-26259937)
chr6 (187-292)||(26259524-26259623)
chr6 (602-689)||(3955884-3955972)
chr6 (599-689)||(2837543-2837634)
chr6 (599-689)||(21893453-21893544)
chr6 (599-689)||(6086717-6086808)
chr6 (600-689)||(26704457-26704547)
chr6 (600-689)||(26946994-26947084)
chr6 (600-689)||(30691850-30691940)
chr6 (617-689)||(34887410-34887482)
chr6 (598-688)||(3347642-3347733)
chr6 (603-689)||(17261191-17261278)
chr6 (77-146)||(26259406-26259475)
chr6 (599-689)||(52834-52925)
chr6 (598-688)||(18613535-18613626)
chr6 (600-682)||(20726790-20726873)
chr6 (599-689)||(35198282-35198372)
chr6 (598-678)||(33463698-33463779)
chr6 (600-689)||(9459562-9459652)
chr6 (599-688)||(16307127-16307217)
chr6 (617-689)||(1153610-1153682)
chr6 (365-425)||(26259701-26259761)
chr6 (599-689)||(11167238-11167329)
chr6 (617-689)||(28199625-28199699)
chr6 (617-689)||(30699047-30699119)
chr6 (536-599)||(26590155-26590218)
[»] chr8 (36 HSPs)
chr8 (598-689)||(40117970-40118062)
chr8 (600-689)||(14422702-14422792)
chr8 (597-689)||(18594533-18594626)
chr8 (599-689)||(39206584-39206675)
chr8 (601-689)||(34842483-34842572)
chr8 (599-689)||(10836873-10836964)
chr8 (599-689)||(39218775-39218866)
chr8 (600-689)||(35118149-35118239)
chr8 (617-689)||(7774781-7774853)
chr8 (602-689)||(7791412-7791500)
chr8 (603-689)||(13110406-13110493)
chr8 (600-689)||(5320563-5320653)
chr8 (599-688)||(24113285-24113375)
chr8 (600-689)||(29938060-29938150)
chr8 (598-686)||(26783854-26783943)
chr8 (605-681)||(42571598-42571675)
chr8 (605-688)||(2042643-2042727)
chr8 (598-689)||(6144391-6144483)
chr8 (603-689)||(8021721-8021808)
chr8 (599-689)||(22260748-22260839)
chr8 (599-689)||(33287143-33287234)
chr8 (598-689)||(4035844-4035936)
chr8 (617-689)||(34999014-34999086)
chr8 (599-689)||(7811993-7812084)
chr8 (604-689)||(41575516-41575602)
chr8 (618-687)||(38167275-38167344)
chr8 (617-689)||(144411-144483)
chr8 (617-689)||(34679575-34679647)
chr8 (617-689)||(44805062-44805134)
chr8 (598-688)||(36491154-36491245)
chr8 (617-689)||(66298-66370)
chr8 (617-687)||(9806890-9806960)
chr8 (600-689)||(33278399-33278489)
chr8 (598-688)||(2322131-2322222)
chr8 (625-689)||(5005191-5005255)
chr8 (617-689)||(39220273-39220345)
[»] chr2 (24 HSPs)
chr2 (598-689)||(1108275-1108366)
chr2 (602-689)||(30420285-30420373)
chr2 (600-689)||(31517333-31517423)
chr2 (598-689)||(26323304-26323396)
chr2 (603-689)||(4016039-4016126)
chr2 (599-689)||(4232260-4232351)
chr2 (599-689)||(6174946-6175037)
chr2 (598-681)||(19901263-19901347)
chr2 (617-689)||(28329955-28330027)
chr2 (617-689)||(33906165-33906237)
chr2 (599-686)||(39635448-39635536)
chr2 (600-686)||(3873365-3873452)
chr2 (613-688)||(5733410-5733485)
chr2 (599-689)||(18807002-18807093)
chr2 (599-689)||(42937715-42937806)
chr2 (598-682)||(30270804-30270889)
chr2 (617-689)||(429831-429903)
chr2 (617-689)||(1483021-1483092)
chr2 (617-686)||(851012-851081)
chr2 (617-689)||(16066412-16066484)
chr2 (599-688)||(2178888-2178978)
chr2 (617-689)||(44947660-44947732)
chr2 (617-689)||(19384053-19384125)
chr2 (599-689)||(16588894-16588985)
[»] chr4 (52 HSPs)
chr4 (601-689)||(40428826-40428915)
chr4 (599-689)||(6611466-6611557)
chr4 (599-689)||(53717570-53717661)
chr4 (600-689)||(23776565-23776655)
chr4 (597-689)||(44785023-44785116)
chr4 (598-689)||(20877042-20877134)
chr4 (599-688)||(15241135-15241225)
chr4 (600-689)||(38055154-38055244)
chr4 (601-689)||(11639684-11639773)
chr4 (600-688)||(19913737-19913826)
chr4 (598-689)||(14987787-14987879)
chr4 (617-689)||(28032818-28032890)
chr4 (613-689)||(37968863-37968939)
chr4 (598-689)||(50353796-50353888)
chr4 (598-689)||(54189540-54189632)
chr4 (602-689)||(54412627-54412715)
chr4 (599-689)||(48909842-48909933)
chr4 (599-689)||(50055207-50055298)
chr4 (600-689)||(6688727-6688817)
chr4 (599-688)||(15669179-15669269)
chr4 (604-688)||(16700782-16700867)
chr4 (602-689)||(1756870-1756958)
chr4 (598-689)||(8932284-8932376)
chr4 (617-689)||(28360445-28360517)
chr4 (598-689)||(30423670-30423762)
chr4 (617-689)||(55344931-55345003)
chr4 (604-689)||(19165077-19165164)
chr4 (599-689)||(27488754-27488845)
chr4 (599-689)||(50053439-50053530)
chr4 (599-688)||(2481515-2481605)
chr4 (598-687)||(23265865-23265955)
chr4 (599-688)||(37464717-37464807)
chr4 (616-689)||(31969695-31969768)
chr4 (617-689)||(38071426-38071498)
chr4 (598-689)||(45424640-45424732)
chr4 (603-689)||(1617084-1617171)
chr4 (617-688)||(33703856-33703927)
chr4 (603-689)||(52139203-52139290)
chr4 (604-689)||(53875658-53875744)
chr4 (617-689)||(8591198-8591270)
chr4 (598-689)||(23704315-23704407)
chr4 (598-689)||(53353050-53353146)
chr4 (601-689)||(47632032-47632122)
chr4 (617-689)||(27583738-27583810)
chr4 (603-689)||(35490879-35490966)
chr4 (599-689)||(43290066-43290157)
chr4 (617-689)||(44379293-44379365)
chr4 (617-688)||(44548248-44548319)
chr4 (599-689)||(27536210-27536297)
chr4 (617-689)||(40680144-40680216)
chr4 (604-689)||(30171581-30171667)
chr4 (602-689)||(44375844-44375932)
[»] chr7 (40 HSPs)
chr7 (598-689)||(12101286-12101378)
chr7 (598-689)||(30181132-30181224)
chr7 (599-689)||(33846632-33846723)
chr7 (598-689)||(42965104-42965196)
chr7 (600-689)||(22649802-22649892)
chr7 (601-689)||(20346487-20346576)
chr7 (598-689)||(43068081-43068173)
chr7 (599-689)||(32041539-32041630)
chr7 (604-689)||(4477429-4477515)
chr7 (600-689)||(33359198-33359288)
chr7 (601-689)||(8630665-8630754)
chr7 (617-689)||(1803042-1803114)
chr7 (598-689)||(3511319-3511411)
chr7 (598-689)||(6394747-6394839)
chr7 (602-689)||(7164184-7164272)
chr7 (617-689)||(37704996-37705068)
chr7 (617-689)||(38866560-38866632)
chr7 (617-689)||(43156729-43156801)
chr7 (599-689)||(24792440-24792531)
chr7 (598-689)||(42204150-42204243)
chr7 (598-689)||(4347269-4347361)
chr7 (598-689)||(5280856-5280948)
chr7 (598-689)||(19828266-19828358)
chr7 (598-688)||(15655908-15655999)
chr7 (598-689)||(36890938-36891029)
chr7 (600-689)||(25748485-25748575)
chr7 (617-689)||(933301-933373)
chr7 (617-689)||(46134412-46134484)
chr7 (617-682)||(42673481-42673546)
chr7 (613-689)||(27691434-27691510)
chr7 (622-689)||(12097698-12097765)
chr7 (617-689)||(9452606-9452678)
chr7 (598-689)||(43021684-43021776)
chr7 (617-689)||(43405036-43405108)
chr7 (603-689)||(46891447-46891535)
chr7 (598-689)||(37005919-37006011)
chr7 (617-689)||(17753616-17753688)
chr7 (638-689)||(16894615-16894666)
chr7 (562-599)||(22851551-22851588)
chr7 (657-689)||(48865689-48865721)
[»] chr5 (27 HSPs)
chr5 (598-689)||(9008175-9008267)
chr5 (598-689)||(33491314-33491406)
chr5 (597-689)||(4120934-4121027)
chr5 (598-689)||(24105789-24105881)
chr5 (599-689)||(1579035-1579126)
chr5 (599-689)||(1605689-1605780)
chr5 (599-689)||(27679287-27679378)
chr5 (598-689)||(19358524-19358616)
chr5 (598-689)||(27420856-27420948)
chr5 (598-689)||(35782762-35782854)
chr5 (600-689)||(5202972-5203062)
chr5 (598-689)||(20992264-20992356)
chr5 (599-689)||(8374456-8374547)
chr5 (617-689)||(1165719-1165791)
chr5 (617-689)||(3386604-3386676)
chr5 (598-689)||(3921579-3921671)
chr5 (617-689)||(16069371-16069443)
chr5 (617-689)||(16737565-16737637)
chr5 (617-689)||(31883162-31883234)
chr5 (598-689)||(20992399-20992495)
chr5 (617-689)||(33284693-33284765)
chr5 (617-689)||(33991158-33991230)
chr5 (600-689)||(31410476-31410566)
chr5 (638-689)||(26603060-26603111)
chr5 (599-689)||(38598568-38598659)
chr5 (644-689)||(27025001-27025046)
chr5 (560-599)||(10585693-10585732)
[»] chr3 (39 HSPs)
chr3 (598-689)||(15520246-15520338)
chr3 (599-689)||(29445481-29445572)
chr3 (599-689)||(37698247-37698338)
chr3 (598-689)||(42308009-42308101)
chr3 (599-689)||(54534430-54534521)
chr3 (599-689)||(54870278-54870369)
chr3 (600-689)||(25494389-25494479)
chr3 (600-689)||(25999382-25999472)
chr3 (617-689)||(21581054-21581126)
chr3 (598-689)||(32244112-32244204)
chr3 (617-688)||(2895197-2895268)
chr3 (598-688)||(20842453-20842544)
chr3 (599-689)||(34700334-34700425)
chr3 (599-688)||(15520629-15520719)
chr3 (599-688)||(22175095-22175185)
chr3 (599-688)||(50528922-50529012)
chr3 (598-689)||(8042599-8042691)
chr3 (598-689)||(12117762-12117854)
chr3 (602-689)||(38856089-38856177)
chr3 (599-689)||(46452266-46452357)
chr3 (600-689)||(26122808-26122898)
chr3 (599-688)||(38933939-38934028)
chr3 (601-688)||(20699144-20699232)
chr3 (617-689)||(50529877-50529949)
chr3 (618-687)||(35226460-35226529)
chr3 (599-689)||(24835803-24835894)
chr3 (601-689)||(35643212-35643301)
chr3 (598-689)||(32359251-32359343)
chr3 (617-689)||(42105075-42105147)
chr3 (598-689)||(49128041-49128133)
chr3 (617-688)||(44609438-44609509)
chr3 (626-689)||(44688782-44688845)
chr3 (617-689)||(48925107-48925177)
chr3 (638-689)||(16354379-16354430)
chr3 (542-596)||(30600446-30600500)
chr3 (617-654)||(24366104-24366141)
chr3 (617-662)||(53028237-53028282)
chr3 (547-581)||(27456363-27456397)
chr3 (628-689)||(12915930-12915990)
[»] chr1 (47 HSPs)
chr1 (599-689)||(1168499-1168590)
chr1 (598-689)||(32671574-32671666)
chr1 (599-689)||(1940865-1940956)
chr1 (599-689)||(29288145-29288236)
chr1 (599-689)||(39260464-39260555)
chr1 (599-689)||(52753265-52753356)
chr1 (600-689)||(970644-970734)
chr1 (598-689)||(20089466-20089558)
chr1 (602-689)||(26663257-26663345)
chr1 (617-689)||(29078531-29078603)
chr1 (599-689)||(2347652-2347743)
chr1 (603-689)||(2473722-2473809)
chr1 (603-689)||(8079827-8079914)
chr1 (599-689)||(25897370-25897461)
chr1 (599-689)||(26580388-26580479)
chr1 (599-688)||(1170563-1170653)
chr1 (600-688)||(42370914-42371003)
chr1 (597-689)||(43905648-43905741)
chr1 (617-689)||(12682835-12682907)
chr1 (598-689)||(16052091-16052183)
chr1 (598-689)||(49146167-49146259)
chr1 (599-689)||(15554262-15554353)
chr1 (603-689)||(19715279-19715366)
chr1 (599-689)||(33510480-33510571)
chr1 (599-689)||(41928613-41928704)
chr1 (604-688)||(8120870-8120955)
chr1 (600-688)||(52696788-52696877)
chr1 (598-689)||(13996841-13996933)
chr1 (617-689)||(15203127-15203199)
chr1 (617-689)||(38829084-38829156)
chr1 (617-689)||(40092506-40092578)
chr1 (602-689)||(5215384-5215472)
chr1 (602-689)||(6765458-6765546)
chr1 (617-689)||(46409450-46409522)
chr1 (620-689)||(7145226-7145294)
chr1 (617-689)||(23498475-23498547)
chr1 (617-689)||(52086282-52086354)
chr1 (599-688)||(17591687-17591774)
chr1 (618-688)||(17587624-17587694)
chr1 (617-689)||(46760981-46761053)
chr1 (536-599)||(12542902-12542965)
chr1 (638-689)||(40149499-40149550)
chr1 (601-689)||(29695673-29695763)
chr1 (600-689)||(51359335-51359424)
chr1 (541-599)||(1848393-1848451)
chr1 (617-689)||(15717800-15717872)
chr1 (617-688)||(38171847-38171918)
[»] scaffold0012 (1 HSPs)
scaffold0012 (599-689)||(36701-36792)
[»] scaffold0920 (1 HSPs)
scaffold0920 (601-689)||(3708-3797)
[»] scaffold0482 (1 HSPs)
scaffold0482 (602-689)||(413-501)
[»] scaffold0167 (1 HSPs)
scaffold0167 (600-689)||(23069-23159)
[»] scaffold0172 (1 HSPs)
scaffold0172 (598-689)||(10233-10325)
[»] scaffold0018 (1 HSPs)
scaffold0018 (617-689)||(145363-145435)
[»] scaffold1777 (1 HSPs)
scaffold1777 (622-689)||(124-191)
[»] scaffold0038 (1 HSPs)
scaffold0038 (617-689)||(123-197)
[»] scaffold0257 (1 HSPs)
scaffold0257 (534-599)||(20640-20705)


Alignment Details
Target: chr6 (Bit Score: 81; Significance: 9e-38; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 515 - 599
Target Start/End: Original strand, 26259853 - 26259937
Alignment:
Q  515 acaaaagcttaaaaatatattaaaggtttagttctttgttggcccatttagaatttatcacgtgatgtcattaaagggagttcaa 599  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  26259853 acaaaagcttaaaaatatattaaaggtttagttctttgttggcccatttagaatttatcacgtgatgtcactaaagggagttcaa 26259937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 187 - 292
Target Start/End: Original strand, 26259524 - 26259623
Alignment:
Q  187 atcttgtaattgcaattcctacatatcctcaataaataaaaagttagttggtttgttatatactatagatatagatatagataaaagatgtcaaaaccaa 286  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||      |||||||||||||||||||||||||||||||    
T  26259524 atcttgtaattgcaattcctacatatcctcaataaataaaaagttagctggtttgttatatac------tatagatatagataaaagatgtcaaaaccaa 26259617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 602 - 689
Target Start/End: Complemental strand, 3955972 - 3955884
Alignment:
Q  602 ccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  3955972 ccccgtttggattggcttattttgagcttatgtgggtttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 3955884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 599 - 689
Target Start/End: Original strand, 2837543 - 2837634
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| || |||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  2837543 aggccccgtttggattggcttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 2837634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 599 - 689
Target Start/End: Original strand, 21893453 - 21893544
Alignment:
Q  599 aggccccgtttggatgg-tttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||    
T  21893453 aggccccgtttggatcgatttattttgagcttatgtgggtttatctactcccataagcctttttaaaggtgtttgggtaaatatataaaaat 21893544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 599 - 689
Target Start/End: Complemental strand, 6086808 - 6086717
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| || |||||||||||||||||||| |||||||||||||||||  |||||||| ||||||||||||||||||||||||    
T  6086808 aggccccgtttggattggcttattttgagcttatgtgggcttatctactcccataagcatttttaaaggtgtttgggtaaataaataaaaat 6086717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 600 - 689
Target Start/End: Complemental strand, 26704547 - 26704457
Alignment:
Q  600 ggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||| ||||||||||||||||| ||||| ||||||||||| ||||| ||||||||| ||||||||||||||||||||||||    
T  26704547 ggccccgtttggattggtttattttgagcttacgtgggcttatctactcctataagcctttttaaaggtgtttgggtaaataaataaaaat 26704457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 600 - 689
Target Start/End: Complemental strand, 26947084 - 26946994
Alignment:
Q  600 ggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||| || ||||||||||||||| |||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  26947084 ggccccgtttggattggcttattttgagcttatatgggcttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 26946994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 600 - 689
Target Start/End: Original strand, 30691850 - 30691940
Alignment:
Q  600 ggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||| ||||||||| || |||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  30691850 ggcctcgtttggattggcttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 30691940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 617 - 689
Target Start/End: Complemental strand, 34887482 - 34887410
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||    
T  34887482 ttattttgagcttatgtgggtttatctcctcccataagcctttttaaaggtgtttgggtaaataaataaaaat 34887410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 598 - 688
Target Start/End: Complemental strand, 3347733 - 3347642
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaa 688  Q
    |||||||||||||||| || |||||||||||||||||||| ||||||||| ||||||| ||||||||| |||||||| ||||||||||||||    
T  3347733 aaggccccgtttggattggcttattttgagcttatgtgggcttatctacttccataagcctttttaaaggtgtttggataaataaataaaaa 3347642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 603 - 689
Target Start/End: Complemental strand, 17261278 - 17261191
Alignment:
Q  603 cccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||| || |||||||||||||||||||| ||||||||||||||||| |||| |||| ||||||||||||||||||||||||    
T  17261278 cccgtttggattggcttattttgagcttatgtgggcttatctactcccataagcctttctaaaggtgtttgggtaaataaataaaaat 17261191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 77 - 146
Target Start/End: Original strand, 26259406 - 26259475
Alignment:
Q  77 aacctttgatggatttgtagctataatcgtattatgttttatgcgatcccacaaccccacacgctacaac 146  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  26259406 aaccttcgatggatttatagctataatcgtattatgttttatgcgatcccacaaccccacacgctgcaac 26259475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 599 - 689
Target Start/End: Original strand, 52834 - 52925
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| || |||||||||||||||||||| |||||||||  ||||||  |||||||| ||||||||||||||||||||||||    
T  52834 aggccccgtttggattggcttattttgagcttatgtgggcttatctactaacataagcatttttaaaggtgtttgggtaaataaataaaaat 52925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 598 - 688
Target Start/End: Original strand, 18613535 - 18613626
Alignment:
Q  598 aaggccccgtttggatggt-ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaa 688  Q
    |||||||||||||||| |  |||||||||||||||| ||  ||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  18613535 aaggccccgtttggattgacttattttgagcttatgcggacttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaa 18613626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 600 - 682
Target Start/End: Original strand, 20726790 - 20726873
Alignment:
Q  600 ggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaa 682  Q
    |||||||||||||| || ||||||||||||||| |||| ||||||||||||||||| ||||||||| |||||||||||||||||    
T  20726790 ggccccgtttggattggcttattttgagcttatatgggcttatctactcccataagcctttttaaaggtgtttgggtaaataaa 20726873  T

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Target: chr6; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 599 - 689
Target Start/End: Original strand, 35198282 - 35198372
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||| || || ||||||||| |||||||||| ||||||||| ||||||| ||||||||| ||||||||||||||||||||||||    
T  35198282 aggccccgtttgaattggcttattttgaacttatgtgggcttatctacttccataag-ctttttaaaggtgtttgggtaaataaataaaaat 35198372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 598 - 678
Target Start/End: Original strand, 33463698 - 33463779
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaa 678  Q
    |||| ||||||||||| || |||||||||||||||||| | ||||||||||||||||| ||||||||| |||||||||||||    
T  33463698 aaggtcccgtttggattggcttattttgagcttatgtgagcttatctactcccataagcctttttaaaggtgtttgggtaaa 33463779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 600 - 689
Target Start/End: Original strand, 9459562 - 9459652
Alignment:
Q  600 ggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||| || |||||||||| ||||||| | ||||||| | ||||||| ||||||||| || |||||||||||||||||||||    
T  9459562 ggccccgtttggattggcttattttgagtttatgtgagcttatctatttccataagcctttttaaaggtatttgggtaaataaataaaaat 9459652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 599 - 688
Target Start/End: Complemental strand, 16307217 - 16307127
Alignment:
Q  599 aggccccgtttggatggt-ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaa 688  Q
    ||||||||||||||| |  ||||||||||||||||| || |||||||||| |||||| |||||| || |||||||| ||||||||||||||    
T  16307217 aggccccgtttggattgacttattttgagcttatgttggcttatctactcgcataagcctttttgaaggtgtttggataaataaataaaaa 16307127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 617 - 689
Target Start/End: Original strand, 1153610 - 1153682
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||| ||||||||| || ||||||||| ||||||| ||||||||| |||||||||||||||| |||||||    
T  1153610 ttattttaagcttatgttggcttatctacttccataagcctttttaaaggtgtttgggtaaataagtaaaaat 1153682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 365 - 425
Target Start/End: Original strand, 26259701 - 26259761
Alignment:
Q  365 ctgccatgaagccagatacccaagccttatctgaggcaaggtgaagaaggcggccatcctt 425  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||| || |||||    
T  26259701 ctgccaagaagccagatacccaagccttatctgaggtaaggtgaagaaggcgaccgtcctt 26259761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 599 - 689
Target Start/End: Original strand, 11167238 - 11167329
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| || |||||||||||||||||| | |||| || |  ||||||  |||||||| ||||||||||||||||||||||||    
T  11167238 aggccccgtttggattggcttattttgagcttatgtgtgcttatttattttcataagtttttttaaaggtgtttgggtaaataaataaaaat 11167329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 617 - 689
Target Start/End: Complemental strand, 28199699 - 28199625
Alignment:
Q  617 ttattttgagcttatgtgggtttatc---tactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||||||  |||||   |||||| ||||| ||||||||| ||||||||||||||||||||||||    
T  28199699 ttattttgagcttatgtggacttatcatctactcc-ataagcctttttaaaggtgtttgggtaaataaataaaaat 28199625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 617 - 689
Target Start/End: Complemental strand, 30699119 - 30699047
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||| |||| ||||||| | |||| || | | ||||| ||||||||| ||||||||||||||||||||||||    
T  30699119 ttattatgagtttatgtgagcttatttatttctataagtctttttaaaggtgtttgggtaaataaataaaaat 30699047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 536 - 599
Target Start/End: Original strand, 26590155 - 26590218
Alignment:
Q  536 aaaggtttagttctttgttggcccatttagaatttatcacgtgatgtcattaaagggagttcaa 599  Q
    |||||||||||| |||||||| ||||||| |||||||||| |||| | | |||||| |||||||    
T  26590155 aaaggtttagttatttgttggtccatttaaaatttatcacttgatattactaaaggaagttcaa 26590218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 2e-35; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 598 - 689
Target Start/End: Complemental strand, 40118062 - 40117970
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  40118062 aaggccccgtttggattggcttattttgagcttatgtgggtttatctactcccataagcctttttaaaagtgtttgggtaaataaataaaaat 40117970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 600 - 689
Target Start/End: Original strand, 14422702 - 14422792
Alignment:
Q  600 ggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  14422702 ggccccgtttggattggtttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 14422792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 597 - 689
Target Start/End: Original strand, 18594533 - 18594626
Alignment:
Q  597 caaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  18594533 caaggccccgtttggattggcttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 18594626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 599 - 689
Target Start/End: Original strand, 39206584 - 39206675
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| || |||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  39206584 aggccccgtttggattggcttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 39206675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 601 - 689
Target Start/End: Complemental strand, 34842572 - 34842483
Alignment:
Q  601 gccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||| || |||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  34842572 gccccgtttggattggcttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 34842483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 599 - 689
Target Start/End: Complemental strand, 10836964 - 10836873
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||| ||||||||| || |||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  10836964 aggcctcgtttggattggcttattttgagcttatgtgggcttatctactcccataagtctttttaaaggtgtttgggtaaataaataaaaat 10836873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 599 - 689
Target Start/End: Original strand, 39218775 - 39218866
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| || |||||||||||||||||||| |||||||||| |||||| ||||||||| ||||||||||||||||||||||||    
T  39218775 aggccccgtttggattggcttattttgagcttatgtgggcttatctactctcataagcctttttaaaggtgtttgggtaaataaataaaaat 39218866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 600 - 689
Target Start/End: Complemental strand, 35118239 - 35118149
Alignment:
Q  600 ggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||| || |||||||||||||||||||| ||||||||||||||||| ||||| ||| ||||||||||||||||||||||||    
T  35118239 ggccccgtttggattggcttattttgagcttatgtgggcttatctactcccataagccttttgaaaggtgtttgggtaaataaataaaaat 35118149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 617 - 689
Target Start/End: Original strand, 7774781 - 7774853
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  7774781 ttattttgagcttatgcgggtttatctactcccataagtctttttaaaggtgtttgggtaaataaataaaaat 7774853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 602 - 689
Target Start/End: Original strand, 7791412 - 7791500
Alignment:
Q  602 ccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||| || |||||||||| ||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  7791412 ccccgtttggattggcttattttgagtttatgtgagtttatctactcccataagtctttttaaaggtgtttgggtaaataaataaaaat 7791500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 603 - 689
Target Start/End: Original strand, 13110406 - 13110493
Alignment:
Q  603 cccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||| || |||||||||||||||||||| ||||||||||||||| | ||||||||| ||||||||||||||||||||||||    
T  13110406 cccgtttggattggcttattttgagcttatgtgggcttatctactcccatatgcctttttaaaggtgtttgggtaaataaataaaaat 13110493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 600 - 689
Target Start/End: Original strand, 5320563 - 5320653
Alignment:
Q  600 ggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||| || |||||||||||||||||| ||||||||||||||||||| |||||||||  ||||| |||||||||||||||||    
T  5320563 ggccccgtttggattggcttattttgagcttatgtgagtttatctactcccataagcctttttaaagttgttttggtaaataaataaaaat 5320653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 599 - 688
Target Start/End: Complemental strand, 24113375 - 24113285
Alignment:
Q  599 aggccccgtttggatggt-ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaa 688  Q
    ||||||||||||||| |  |||||||||||||||||||| ||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  24113375 aggccccgtttggattgacttattttgagcttatgtgggcttatctactcccataaccctttttaaaggtgtttgggtaaataaataaaaa 24113285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 600 - 689
Target Start/End: Original strand, 29938060 - 29938150
Alignment:
Q  600 ggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||| || |||||||||||||||||||| |||| |||||||||||| ||||||||| |||||||||||||||| |||||||    
T  29938060 ggccccgtttggattggcttattttgagcttatgtgggcttatatactcccataagcctttttaaaggtgtttgggtaaataagtaaaaat 29938150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 598 - 686
Target Start/End: Complemental strand, 26783943 - 26783854
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaa 686  Q
    |||||| ||||||||| || |||||||||||||||||||| |||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  26783943 aaggcctcgtttggattggcttattttgagcttatgtgggcttatctactctcataagcctttttaaaggtgtttgggtaaataaataaa 26783854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 605 - 681
Target Start/End: Original strand, 42571598 - 42571675
Alignment:
Q  605 cgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataa 681  Q
    ||||||||| || |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  42571598 cgtttggattggcttattttgagcttatgtgggtttatctacttccataagcctttttaaaagtgtttgggtaaataa 42571675  T

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Target: chr8; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 605 - 688
Target Start/End: Complemental strand, 2042727 - 2042643
Alignment:
Q  605 cgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaa 688  Q
    ||||||||| || |||||||||||||||||||| |||||||||| |||||| ||||||||| |||||||||||||||||||||||    
T  2042727 cgtttggattggcttattttgagcttatgtgggcttatctactctcataagcctttttaaaggtgtttgggtaaataaataaaaa 2042643  T

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Target: chr8; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 598 - 689
Target Start/End: Complemental strand, 6144483 - 6144391
Alignment:
Q  598 aaggccccgtttggatggt-ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||| |  ||||||||||||||| |||| ||||||||||||||| | |||||||| |||||||||||||||||||||||||    
T  6144483 aaggccccgtttggattgacttattttgagcttatatgggcttatctactcccatatgcctttttaacagtgtttgggtaaataaataaaaat 6144391  T

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Target: chr8; HSP #19
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 603 - 689
Target Start/End: Original strand, 8021721 - 8021808
Alignment:
Q  603 cccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||| || ||||||||||||||| |||| ||||||||||||||||| |||||||||  |||||||||||||||||||||||    
T  8021721 cccgtttggattggcttattttgagcttatatgggcttatctactcccataagcctttttaaagatgtttgggtaaataaataaaaat 8021808  T

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Target: chr8; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 599 - 689
Target Start/End: Complemental strand, 22260839 - 22260748
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| || |||||||||||||||||| | ||||||||||||||||| ||||||||| | |||||||||||| |||||||||    
T  22260839 aggccccgtttggattggcttattttgagcttatgtgagcttatctactcccataagtctttttaaaggcgtttgggtaaatcaataaaaat 22260748  T

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Target: chr8; HSP #21
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 599 - 689
Target Start/End: Complemental strand, 33287234 - 33287143
Alignment:
Q  599 aggccccgtttggatggt-ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| |  |||||||||||||||||||||||||||||||||||| |  |||||||| |||||||| |||||||||||||||    
T  33287234 aggccccgtttggattgacttattttgagcttatgtgggtttatctactcccatatgcttttttaaaggtgtttggataaataaataaaaat 33287143  T

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Target: chr8; HSP #22
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 598 - 689
Target Start/End: Original strand, 4035844 - 4035936
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||| |||||||||| ||||||| |||| |||||||||||||||||  || ||||| ||||||||||||| ||||||||||    
T  4035844 aaggccccgtttggattggtttatttttagcttatatgggcttatctactcccataagttttattaaaggtgtttgggtaaacaaataaaaat 4035936  T

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Target: chr8; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 617 - 689
Target Start/End: Complemental strand, 34999086 - 34999014
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||  ||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||    
T  34999086 ttattttgagcttatacgggtttatctactcctataagcctttttaaaggtgtttgggtaaataaataaaaat 34999014  T

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Target: chr8; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 599 - 689
Target Start/End: Original strand, 7811993 - 7812084
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||| ||| || |||||||||| ||||||| ||||||||||| |||| || ||||||||| ||||||||||||||||||||||||    
T  7811993 aggccccgttttgattggcttattttgagtttatgtgagtttatctacttccattagtctttttaaaggtgtttgggtaaataaataaaaat 7812084  T

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Target: chr8; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 604 - 689
Target Start/End: Original strand, 41575516 - 41575602
Alignment:
Q  604 ccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||| || ||||||||||||||||| |  ||||||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  41575516 ccgtttggattggcttattttgagcttatgtagacttatctactcccataagcctttttaaaggtgtttggataaataaataaaaat 41575602  T

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Target: chr8; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 618 - 687
Target Start/End: Complemental strand, 38167344 - 38167275
Alignment:
Q  618 tattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaa 687  Q
    ||||||||| ||||||||| ||||||| ||||||||| ||||||||| ||||||||||||||||||||||    
T  38167344 tattttgagtttatgtgggcttatctattcccataagtctttttaaaggtgtttgggtaaataaataaaa 38167275  T

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Target: chr8; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 617 - 689
Target Start/End: Original strand, 144411 - 144483
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||| |||||||  ||||||||||||||||| ||||||||| |||||||||||| |||||||||||    
T  144411 ttattttgagcatatgtggacttatctactcccataagcctttttaaaggtgtttgggtaagtaaataaaaat 144483  T

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Target: chr8; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 617 - 689
Target Start/End: Complemental strand, 34679647 - 34679575
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| |||| ||||||||||||||||| ||||||||| |||||||  |||||||||||||||    
T  34679647 ttattttgagcttatatgggcttatctactcccataagcctttttaaaggtgtttgaataaataaataaaaat 34679575  T

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Target: chr8; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 617 - 689
Target Start/End: Complemental strand, 44805134 - 44805062
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||||| ||||||||||||||||||||  |||||||| |||||| | |||||||||||||||    
T  44805134 ttattttgagcttatgtaggtttatctactcccataagcatttttaaaggtgtttagataaataaataaaaat 44805062  T

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Target: chr8; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 598 - 688
Target Start/End: Original strand, 36491154 - 36491245
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaa 688  Q
    |||||||| ||||||| || ||||||| |||||||||||| ||||||| || |||||| |||||| || |||||||||||||||||||||||    
T  36491154 aaggccccatttggattggcttattttaagcttatgtgggattatctaatcgcataagtctttttgaaggtgtttgggtaaataaataaaaa 36491245  T

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Target: chr8; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 617 - 689
Target Start/End: Complemental strand, 66370 - 66298
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||| || ||| || ||||||| ||||||| | ||||||||||||||||||||||||||||||||||    
T  66370 ttattttgagtttctgtaggcttatctattcccatatgtctttttaaaagtgtttgggtaaataaataaaaat 66298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 617 - 687
Target Start/End: Original strand, 9806890 - 9806960
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaa 687  Q
    |||||||||| |||| || | ||||||||||||||| | ||||||||| ||||||||||||||||||||||    
T  9806890 ttattttgagtttatatgtgcttatctactcccatatgcctttttaaatgtgtttgggtaaataaataaaa 9806960  T

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Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 600 - 689
Target Start/End: Original strand, 33278399 - 33278489
Alignment:
Q  600 ggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||| || |||||||||| |||| |||  |||||||||  |||||| ||||||||| |||||||| |||||||||||||||    
T  33278399 ggccccgtttggattggcttattttgagtttatatggacttatctactttcataagtctttttaaaggtgtttggataaataaataaaaat 33278489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 598 - 688
Target Start/End: Complemental strand, 2322222 - 2322131
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaa 688  Q
    |||||||||||||||| || |||||  |||||||| ||| ||||||||||  ||||||  |||||||| |||||||||||||| ||||||||    
T  2322222 aaggccccgtttggattggcttattcggagcttatatggatttatctactaacataagcttttttaaaggtgtttgggtaaatcaataaaaa 2322131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 625 - 689
Target Start/End: Original strand, 5005191 - 5005255
Alignment:
Q  625 agcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||| ||||||||| |||||||  |||||||| | |||||||||||| |||||||||    
T  5005191 agcttatgtgggcttatctacttccataagcttttttaaaggcgtttgggtaaatcaataaaaat 5005255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 617 - 689
Target Start/End: Original strand, 39220273 - 39220345
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| ||   ||||||||  ||||| | ||||||||| ||||||| |||||| |||||||||    
T  39220273 ttattttgagcttatatgaacttatctacatccatatgtctttttaaaggtgtttgagtaaatcaataaaaat 39220345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 9e-35; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 598 - 689
Target Start/End: Original strand, 1108275 - 1108366
Alignment:
Q  598 aaggccccgtttggatggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  1108275 aaggccccgtttggatggcttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 1108366  T

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Target: chr2; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 602 - 689
Target Start/End: Complemental strand, 30420373 - 30420285
Alignment:
Q  602 ccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||| || |||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  30420373 ccccgtttggattggcttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 30420285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 600 - 689
Target Start/End: Complemental strand, 31517423 - 31517333
Alignment:
Q  600 ggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||| || ||||||||||||||| |||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  31517423 ggccccgtttggattggcttattttgagcttatttgggcttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 31517333  T

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Target: chr2; HSP #4
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 598 - 689
Target Start/End: Complemental strand, 26323396 - 26323304
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||| |||||||||  ||||||| |||||||||||||||    
T  26323396 aaggccccgtttggattggtttattttgagcttatgtggacttatctactcccataagtctttttaaagatgtttggataaataaataaaaat 26323304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 603 - 689
Target Start/End: Original strand, 4016039 - 4016126
Alignment:
Q  603 cccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||| || |||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||| |||||||||||||    
T  4016039 cccgtttggattggcttattttgagcttatgtgagtttatctactcccataagcctttttaaaggtgtttgggtgaataaataaaaat 4016126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 599 - 689
Target Start/End: Complemental strand, 4232351 - 4232260
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| || |||||||| ||||||||||| ||||||||| ||||||| ||||||||| ||||||||||||||||||||||||    
T  4232351 aggccccgtttggattggcttattttgtgcttatgtgggcttatctacttccataagtctttttaaatgtgtttgggtaaataaataaaaat 4232260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 599 - 689
Target Start/End: Complemental strand, 6175037 - 6174946
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| || |||||||||||||||||| | |||| |||||||||||| ||||||||| ||||||||||||||||||||||||    
T  6175037 aggccccgtttggattggcttattttgagcttatgtgagcttatatactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 6174946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 598 - 681
Target Start/End: Complemental strand, 19901347 - 19901263
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataa 681  Q
    |||||||||||||||| || |||||||||||||||||||| || |||||| ||||||| ||||||||||||||||||||||||||    
T  19901347 aaggccccgtttggattggcttattttgagcttatgtgggcttctctacttccataagcctttttaaaagtgtttgggtaaataa 19901263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 617 - 689
Target Start/End: Complemental strand, 28330027 - 28329955
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||||||| |||||||| |||||||| ||||||||| ||||||||||||||||||||||||    
T  28330027 ttattttgagcttatgtgggcttatctacacccataagcctttttaaaggtgtttgggtaaataaataaaaat 28329955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 617 - 689
Target Start/End: Complemental strand, 33906237 - 33906165
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||| |||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  33906237 ttattttgaacttatgtgggcttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 33906165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 599 - 686
Target Start/End: Original strand, 39635448 - 39635536
Alignment:
Q  599 aggccccgtttggatg-gtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaa 686  Q
    |||||||||||||||  | |||||||||||||||||||  ||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  39635448 aggccccgtttggattagcttattttgagcttatgtggacttatctactcccataagcctttttaaaggtgtttgggtaaataaataaa 39635536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 600 - 686
Target Start/End: Complemental strand, 3873452 - 3873365
Alignment:
Q  600 ggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaa 686  Q
    |||| ||||||||| || |||||||||||||||||||| |||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  3873452 ggcctcgtttggattggcttattttgagcttatgtgggcttatctactctcataagcctttttaaaggtgtttgggtaaataaataaa 3873365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 613 - 688
Target Start/End: Original strand, 5733410 - 5733485
Alignment:
Q  613 tggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaa 688  Q
    |||||||||||||||||||||||| |||||||||||||| || ||||||||| |||||||||| ||||||||||||    
T  5733410 tggtttattttgagcttatgtgggcttatctactcccatcagcctttttaaaggtgtttgggtgaataaataaaaa 5733485  T

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Target: chr2; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 599 - 689
Target Start/End: Complemental strand, 18807093 - 18807002
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| || ||||||||||||||| || | |||||||||| |||||| ||||||||| ||||||||||||||||||||||||    
T  18807093 aggccccgtttggattggcttattttgagcttatatgagcttatctactctcataagcctttttaaaggtgtttgggtaaataaataaaaat 18807002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 599 - 689
Target Start/End: Original strand, 42937715 - 42937806
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||| |||||||||| || |||||||||||||||||| ||||||||| | ||||||| ||||||||| ||||||||||||||||||||||||    
T  42937715 aggctccgtttggattggcttattttgagcttatgtgagtttatctatttccataagcctttttaaaggtgtttgggtaaataaataaaaat 42937806  T

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Target: chr2; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 598 - 682
Target Start/End: Complemental strand, 30270889 - 30270804
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaa 682  Q
    |||||||||||||||| || ||||||| ||||||| || ||||||||||||||||||| |||||||||||||||||| ||||||||    
T  30270889 aaggccccgtttggattggcttattttaagcttatatgagtttatctactcccataagcctttttaaaagtgtttggataaataaa 30270804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 617 - 689
Target Start/End: Original strand, 429831 - 429903
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||  |||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  429831 ttattttgaatttatgtggatttatctactctcataagcctttttaaaagtgtttgggtaaataaataaaaat 429903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 617 - 689
Target Start/End: Complemental strand, 1483092 - 1483021
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||||||| ||||||||||| |||||  |||||||||||||||||||||||||||||||||    
T  1483092 ttattttgagcttatgtgggcttatctactcc-ataagcttttttaaaagtgtttgggtaaataaataaaaat 1483021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 617 - 686
Target Start/End: Original strand, 851012 - 851081
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaa 686  Q
    ||||||| ||||||||| || |||||||||| |||||| |||||||||||||||||||||||||||||||    
T  851012 ttattttaagcttatgtaggcttatctactctcataagcctttttaaaagtgtttgggtaaataaataaa 851081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 617 - 689
Target Start/End: Complemental strand, 16066484 - 16066412
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||||||| |||||| ||  |||||| |||||| |||||||||||||||||||||||||||    
T  16066484 ttattttgagcttatgtgggcttatctgctttcataagtcttttttaaagtgtttgggtaaataaataaaaat 16066412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 599 - 688
Target Start/End: Complemental strand, 2178978 - 2178888
Alignment:
Q  599 aggccccgtttggatgg-tttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaa 688  Q
    ||||||||||||||| | |||||||| || ||||||||  ||||||| || |||||| ||||||||| |||||||||||||||||||||||    
T  2178978 aggccccgtttggattgatttattttaagtttatgtggacttatctattcgcataagtctttttaaaggtgtttgggtaaataaataaaaa 2178888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 617 - 689
Target Start/End: Complemental strand, 44947732 - 44947660
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||| |||||||| ||||||||| | |||||||  ||||||||||||||||| |||||||||||||||    
T  44947732 ttattttgatcttatgtgagtttatctagtgccataagcatttttaaaagtgtttggataaataaataaaaat 44947660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 617 - 689
Target Start/End: Complemental strand, 19384125 - 19384053
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||| |||| || | ||||||| || |||||| ||||||||| ||||||||||||||||||||||||    
T  19384125 ttattttgagtttatatgagcttatctattctcataagtctttttaaaggtgtttgggtaaataaataaaaat 19384053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 599 - 689
Target Start/End: Complemental strand, 16588985 - 16588894
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||| |||||||||| || |||||||| | ||||||||| |||||||||  |||||| |||||||||   ||||||||||||||||||||||    
T  16588985 aggctccgtttggattggcttattttgtgtttatgtgggcttatctactttcataagtctttttaaagaagtttgggtaaataaataaaaat 16588894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 3e-31; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 601 - 689
Target Start/End: Complemental strand, 40428915 - 40428826
Alignment:
Q  601 gccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||| || || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  40428915 gccccgtttgaattggcttattttgagcttatgtgggtttatctactcccataagcctttttaaaagtgtttgggtaaataaataaaaat 40428826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 599 - 689
Target Start/End: Complemental strand, 6611557 - 6611466
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  6611557 aggccccgtttggattggtttattttgagcttatgtggacttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 6611466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 599 - 689
Target Start/End: Complemental strand, 53717661 - 53717570
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| || |||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  53717661 aggccccgtttggattggcttattttgagcttatgtgagtttatctactcccataagcctttttaaatgtgtttgggtaaataaataaaaat 53717570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 600 - 689
Target Start/End: Complemental strand, 23776655 - 23776565
Alignment:
Q  600 ggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||| || |||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  23776655 ggccccgtttggattggcttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 23776565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 597 - 689
Target Start/End: Complemental strand, 44785116 - 44785023
Alignment:
Q  597 caaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||| ||||||||||    
T  44785116 caaggccccgtttggattggcttattttgagcttatgtgggcttatctactcccataagcctttgtaaaagtgtttgggtaaacaaataaaaat 44785023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 598 - 689
Target Start/End: Original strand, 20877042 - 20877134
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||| ||||||||||| || |||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  20877042 aaggtcccgtttggattggcttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 20877134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 599 - 688
Target Start/End: Complemental strand, 15241225 - 15241135
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaa 688  Q
    ||||| ||||||||| || |||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||    
T  15241225 aggcctcgtttggattggcttattttgagcttatgtgggtttatctactcctataagcctttttaaaggtgtttgggtaaataaataaaaa 15241135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 600 - 689
Target Start/End: Original strand, 38055154 - 38055244
Alignment:
Q  600 ggccccgtttggatggt-ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||| |  |||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  38055154 ggccccgtttggattgacttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 38055244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 601 - 689
Target Start/End: Complemental strand, 11639773 - 11639684
Alignment:
Q  601 gccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||| |||||||||||| |||||||||| |||||||||| |||||| ||||||||| ||||||||||||||||||||||||    
T  11639773 gccccgtttggattggtttattttgaacttatgtgggcttatctactctcataagcctttttaaatgtgtttgggtaaataaataaaaat 11639684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 600 - 688
Target Start/End: Complemental strand, 19913826 - 19913737
Alignment:
Q  600 ggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaa 688  Q
    |||||||||||||| || |||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| ||||    
T  19913826 ggccccgtttggattggcttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgtttgggtaaataaattaaaa 19913737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 598 - 689
Target Start/End: Original strand, 14987787 - 14987879
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||| || |||||||||||||||||||| |||| |||||||||||| | ||||||| ||||||||||||||||||||||||    
T  14987787 aaggccccgtttggattggcttattttgagcttatgtgggcttatatactcccataagccattttaaaggtgtttgggtaaataaataaaaat 14987879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 617 - 689
Target Start/End: Complemental strand, 28032890 - 28032818
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  28032890 ttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 28032818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 613 - 689
Target Start/End: Complemental strand, 37968939 - 37968863
Alignment:
Q  613 tggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||||||||||| |||||||||||||||||  |||||||| ||||||||||||||||||||||||    
T  37968939 tggtttattttgagcttatgtgggcttatctactcccataagtttttttaaaggtgtttgggtaaataaataaaaat 37968863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 598 - 689
Target Start/End: Original strand, 50353796 - 50353888
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||| || ||||||||||||| |||| | ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  50353796 aaggccccgtttggattggcttattttgagcttctgtgagcttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 50353888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 598 - 689
Target Start/End: Original strand, 54189540 - 54189632
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||| || |||||||||||||||||||| |||||||||  |||||| ||||||||| ||||||||||||||||||||||||    
T  54189540 aaggccccgtttggattggcttattttgagcttatgtgggcttatctactaacataagcctttttaaaggtgtttgggtaaataaataaaaat 54189632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 602 - 689
Target Start/End: Original strand, 54412627 - 54412715
Alignment:
Q  602 ccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||| || |||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  54412627 ccccgtttggattggcttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgtttggataaataaataaaaat 54412715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 599 - 689
Target Start/End: Original strand, 48909842 - 48909933
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||| |||||||| || |||||||||||||||||||||||||||||||||||||  ||||||||| |||||||| |||||||||||||||    
T  48909842 aggccctgtttggattggcttattttgagcttatgtgggtttatctactcccataaacctttttaaaggtgtttggataaataaataaaaat 48909933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 599 - 689
Target Start/End: Complemental strand, 50055298 - 50055207
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| || |||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||| ||||||||| |||||    
T  50055298 aggccccgtttggattggcttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgtttggataaataaatgaaaat 50055207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 600 - 689
Target Start/End: Complemental strand, 6688817 - 6688727
Alignment:
Q  600 ggccccgtttggatggt-ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||| |  |||||||||| ||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  6688817 ggccccgtttggattgacttattttgagtttatgtgggcttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 6688727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 599 - 688
Target Start/End: Original strand, 15669179 - 15669269
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaa 688  Q
    ||||||||||||||| || |||||||||||||||||| | ||||||| || |||||||||||||||| |||||||||||||||||||||||    
T  15669179 aggccccgtttggattggcttattttgagcttatgtgagcttatctaatcacataagactttttaaaggtgtttgggtaaataaataaaaa 15669269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 604 - 688
Target Start/End: Original strand, 16700782 - 16700867
Alignment:
Q  604 ccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaa 688  Q
    |||||||||| || |||||||||||||||||||| ||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  16700782 ccgtttggattggcttattttgagcttatgtgggcttatctactcccataaacctttttaaaggtgtttgggtaaataaataaaaa 16700867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 602 - 689
Target Start/End: Complemental strand, 1756958 - 1756870
Alignment:
Q  602 ccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||| || ||||||||||||||| |||| |||||||||||||||||  |||||||| ||||||||||||||||||||||||    
T  1756958 ccccgtttggattggcttattttgagcttatatgggcttatctactcccataagcttttttaaaggtgtttgggtaaataaataaaaat 1756870  T

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Target: chr4; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 598 - 689
Target Start/End: Complemental strand, 8932376 - 8932284
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||| || |||||||||||||||| ||| ||||||||||| ||||| ||||||||| ||||||| ||||||||||||||||    
T  8932376 aaggccccgtttggattggcttattttgagcttatgcgggcttatctactcctataagcctttttaaaggtgtttgagtaaataaataaaaat 8932284  T

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Target: chr4; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 617 - 689
Target Start/End: Original strand, 28360445 - 28360517
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||||||| || |||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  28360445 ttattttgagcttatgtgggcttttctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 28360517  T

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Target: chr4; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 598 - 689
Target Start/End: Complemental strand, 30423762 - 30423670
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||| ||||||||||| || |||||||||| ||||||||| ||||||||| ||||||| ||||||||| ||||||||||||||||||||||||    
T  30423762 aaggtcccgtttggattggcttattttgagtttatgtgggcttatctacttccataagcctttttaaaggtgtttgggtaaataaataaaaat 30423670  T

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Target: chr4; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 617 - 689
Target Start/End: Complemental strand, 55345003 - 55344931
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||  |||||||||||||||||||||||    
T  55345003 ttattttgagcttatgtgggtttatctactctcataagcctttttaaagatgtttgggtaaataaataaaaat 55344931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 604 - 689
Target Start/End: Complemental strand, 19165164 - 19165077
Alignment:
Q  604 ccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagac-tttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||| || |||||||||||||||||||| ||||||||||||||||| | |||||||| ||||||||||||||||||||||||    
T  19165164 ccgtttggattggcttattttgagcttatgtgggcttatctactcccataagtcttttttaaaggtgtttgggtaaataaataaaaat 19165077  T

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Target: chr4; HSP #28
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 599 - 689
Target Start/End: Complemental strand, 27488845 - 27488754
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| || |||  |||||||||| |||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  27488845 aggccccgtttggattggcttaagttgagcttatctgggcttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 27488754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 599 - 689
Target Start/End: Original strand, 50053439 - 50053530
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| || ||||||||||||||| |||  ||||||||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  50053439 aggccccgtttggattggcttattttgagcttatatggacttatctactcccataagcctttttaaatgtgtttgggcaaataaataaaaat 50053530  T

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Target: chr4; HSP #30
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 599 - 688
Target Start/End: Complemental strand, 2481605 - 2481515
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaa 688  Q
    ||||||||||||||| || |||||||||||||||||||| |||||||||| |||||| |||||| || ||||||||||||||||| |||||    
T  2481605 aggccccgtttggattggcttattttgagcttatgtgggcttatctactcgcataagcctttttgaaggtgtttgggtaaataaacaaaaa 2481515  T

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Target: chr4; HSP #31
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 598 - 687
Target Start/End: Complemental strand, 23265955 - 23265865
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaa 687  Q
    |||| ||||||||||| || |||||||||||||||||||| ||||||||||  ||||| ||||||||| ||||||||||||||||||||||    
T  23265955 aaggtcccgtttggattggcttattttgagcttatgtgggcttatctactcggataagcctttttaaaggtgtttgggtaaataaataaaa 23265865  T

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Target: chr4; HSP #32
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 599 - 688
Target Start/End: Original strand, 37464717 - 37464807
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaa 688  Q
    |||||||||||| || || |||||||||||||||||||| ||||||| || |||||| ||||||||| |||||||||||||||||||||||    
T  37464717 aggccccgtttgaattggcttattttgagcttatgtgggcttatctattcgcataagcctttttaaaggtgtttgggtaaataaataaaaa 37464807  T

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Target: chr4; HSP #33
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 616 - 689
Target Start/End: Original strand, 31969695 - 31969768
Alignment:
Q  616 tttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||| |||| ||||||||||||||||| |||||||||  |||||||||||||||||||||||    
T  31969695 tttattttgagcttatatgggcttatctactcccataagcctttttaaagatgtttgggtaaataaataaaaat 31969768  T

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Target: chr4; HSP #34
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 617 - 689
Target Start/End: Complemental strand, 38071498 - 38071426
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||||||| |||||||||| |||||  ||||||||| ||||||||||||||||||||||||    
T  38071498 ttattttgagcttatgtgggcttatctactctcataatcctttttaaaggtgtttgggtaaataaataaaaat 38071426  T

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Target: chr4; HSP #35
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 598 - 689
Target Start/End: Complemental strand, 45424732 - 45424640
Alignment:
Q  598 aaggccccgtttggatggt-ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||| |  ||||||||||||||||| || |||||||||| |||||| |||||| || ||||||||||||||||||||||||    
T  45424732 aaggccccgtttggattgacttattttgagcttatgttggcttatctactcgcataagcctttttgaaggtgtttgggtaaataaataaaaat 45424640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 603 - 689
Target Start/End: Original strand, 1617084 - 1617171
Alignment:
Q  603 cccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||| || |||||||||||||||||| | ||||||| || |||||| ||||||||| ||||||||||||||||||||||||    
T  1617084 cccgtttggattggcttattttgagcttatgtgagcttatctattctcataagtctttttaaaggtgtttgggtaaataaataaaaat 1617171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 617 - 688
Target Start/End: Original strand, 33703856 - 33703927
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaa 688  Q
    |||||||||||||||||| ||||||||||||  ||||| ||||||||| |||||||||||||||||||||||    
T  33703856 ttattttgagcttatgtgagtttatctactcggataagcctttttaaaggtgtttgggtaaataaataaaaa 33703927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 603 - 689
Target Start/End: Original strand, 52139203 - 52139290
Alignment:
Q  603 cccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||| || ||||||||| |||||||||||||||||| | | ||||| ||||||||| ||||||||||||||||||||||||    
T  52139203 cccgtttggattggcttattttgaacttatgtgggtttatctatttctataagtctttttaaaggtgtttgggtaaataaataaaaat 52139290  T

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Target: chr4; HSP #39
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 604 - 689
Target Start/End: Original strand, 53875658 - 53875744
Alignment:
Q  604 ccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||| || ||||||| |||||||||||| |||| ||||| |||||| ||||||||| ||||||||||||||||||||||||    
T  53875658 ccgtttggattggcttattttaagcttatgtgggcttatatactctcataagcctttttaaaggtgtttgggtaaataaataaaaat 53875744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 617 - 689
Target Start/End: Complemental strand, 8591270 - 8591198
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||| ||||||||||||||||||| | ||||| |||||||||  |||||||||||||||||||||||    
T  8591270 ttattttgagtttatgtgggtttatctacttctataagcctttttaaagatgtttgggtaaataaataaaaat 8591198  T

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Target: chr4; HSP #41
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 598 - 689
Target Start/End: Complemental strand, 23704407 - 23704315
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||| |||||||| || ||||||||||||||| || | |||||||||| |||||| ||||| ||| ||||||||||||||||||||||||    
T  23704407 aaggccctgtttggattggcttattttgagcttatatgagcttatctactcacataagccttttgaaaggtgtttgggtaaataaataaaaat 23704315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 598 - 689
Target Start/End: Original strand, 53353050 - 53353146
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagctta----tgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||| || ||||||||||||||    | |||| ||||||||||||||| | ||||||||| ||||||||||||||||||||||||    
T  53353050 aaggccccgtttggattggcttattttgagcttaattatatgggcttatctactcccatatgtctttttaaaggtgtttgggtaaataaataaaaat 53353146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 601 - 689
Target Start/End: Original strand, 47632032 - 47632122
Alignment:
Q  601 gccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaa-gtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||| || |||||||||| ||||||||  |||||||||| |||||  |||||||||| ||||||||||||||||||||||||    
T  47632032 gccccgtttggattggcttattttgagtttatgtggacttatctactctcataaacctttttaaaaggtgtttgggtaaataaataaaaat 47632122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 617 - 689
Target Start/End: Complemental strand, 27583810 - 27583738
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||||| || |||||||||||||||||  ||||||||  ||||||| |||||||||||||||    
T  27583810 ttattttgagcttatgtaggcttatctactcccataagcttttttaaagatgtttggataaataaataaaaat 27583738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 603 - 689
Target Start/End: Complemental strand, 35490966 - 35490879
Alignment:
Q  603 cccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||| || ||||||||||||||| |||| ||||| |||| ||||||  |||||||| |||||||| |||||||||||||||    
T  35490966 cccgtttggattggcttattttgagcttatatgggcttatccactctcataagcttttttaaaggtgtttggataaataaataaaaat 35490879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 599 - 689
Target Start/End: Complemental strand, 43290157 - 43290066
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||| |||||||||| || ||||||||||||| | || | |||||||||| |||||| ||||||||| ||||||| ||||||||||||||||    
T  43290157 aggctccgtttggattggcttattttgagcttttatgtgcttatctactcacataagcctttttaaaggtgtttgagtaaataaataaaaat 43290066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 617 - 689
Target Start/End: Complemental strand, 44379365 - 44379293
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||| |||| | || ||||||||| ||||||  ||||||||| ||||||||||||||||||||||||    
T  44379365 ttattttgagtttatataggcttatctacttccataaacctttttaaaggtgtttgggtaaataaataaaaat 44379293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 617 - 688
Target Start/End: Complemental strand, 44548319 - 44548248
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaa 688  Q
    |||||| ||||||||||||| |||||||||  |||||| ||||||||| |||||||| ||||| ||||||||    
T  44548319 ttatttggagcttatgtgggcttatctactaacataagcctttttaaaggtgtttggataaatcaataaaaa 44548248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 599 - 689
Target Start/End: Complemental strand, 27536297 - 27536210
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| || |||||||||||||||  ||| |||    |||||||||| ||| ||||| ||||||||||||||||||||||||    
T  27536297 aggccccgtttggattggcttattttgagcttatacgggctta----ctcccataagccttcttaaaggtgtttgggtaaataaataaaaat 27536210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 617 - 689
Target Start/End: Complemental strand, 40680216 - 40680144
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||  ||||||| | ||||||||| ||||||| ||||||||| || ||||| |||||||||||||||    
T  40680216 ttattttgaatttatgtgagcttatctacttccataagtctttttaaaggtatttggataaataaataaaaat 40680144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 604 - 689
Target Start/End: Original strand, 30171581 - 30171667
Alignment:
Q  604 ccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||| || |||||||||||||||||| | ||||||  | |||||||  |||||||| |||||||| ||||||||| |||||    
T  30171581 ccgtttggattggcttattttgagcttatgtgagcttatcttattccataagcttttttaaaggtgtttggataaataaatgaaaat 30171667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 602 - 689
Target Start/End: Original strand, 44375844 - 44375932
Alignment:
Q  602 ccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||| || ||||||| |||||||||||| ||||||| ||| |||    |||||| | ||||| ||||||||||||||||||    
T  44375844 ccccgtttggattggcttattttaagcttatgtgggcttatctattccaatagccatttttataggtgttcgggtaaataaataaaaat 44375932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 1e-30; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 598 - 689
Target Start/End: Complemental strand, 12101378 - 12101286
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||| ||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  12101378 aaggccccatttggattggcttattttgagcttatgtgggtttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 12101286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 598 - 689
Target Start/End: Complemental strand, 30181224 - 30181132
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||| || |||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  30181224 aaggccccgtttggattggcttattttgagcttatgtgggcttatctactcccataagtctttttaaaggtgtttgggtaaataaataaaaat 30181132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 599 - 689
Target Start/End: Complemental strand, 33846723 - 33846632
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| || |||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  33846723 aggccccgtttggattggcttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 33846632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 598 - 689
Target Start/End: Complemental strand, 42965196 - 42965104
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||| ||||||| || |||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  42965196 aaggccccttttggattggcttattttgagcttatgtgggcttatctactcccataagtctttttaaaggtgtttgggtaaataaataaaaat 42965104  T

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Target: chr7; HSP #5
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 600 - 689
Target Start/End: Complemental strand, 22649892 - 22649802
Alignment:
Q  600 ggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||| || || |||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  22649892 ggccccgtttgaattggcttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 22649802  T

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Target: chr7; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 601 - 689
Target Start/End: Original strand, 20346487 - 20346576
Alignment:
Q  601 gccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||| || |||||||||||||||||||| |||||||||| |||||| ||||||||| ||||||||||||||||||||||||    
T  20346487 gccccgtttggattggcttattttgagcttatgtgggcttatctactctcataagcctttttaaaggtgtttgggtaaataaataaaaat 20346576  T

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Target: chr7; HSP #7
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 598 - 689
Target Start/End: Complemental strand, 43068173 - 43068081
Alignment:
Q  598 aaggccccgtttggatggt-ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||| |  ||||||||||||||| |||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  43068173 aaggccccgtttggattgacttattttgagcttatatgggcttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 43068081  T

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Target: chr7; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 599 - 689
Target Start/End: Original strand, 32041539 - 32041630
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| || |||||||| ||||||||||| ||||||||| ||||||| ||||||||| ||||||||||||||||||||||||    
T  32041539 aggccccgtttggattggcttattttgtgcttatgtgggcttatctacttccataagtctttttaaatgtgtttgggtaaataaataaaaat 32041630  T

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Target: chr7; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 604 - 689
Target Start/End: Complemental strand, 4477515 - 4477429
Alignment:
Q  604 ccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||| || |||||||||||||||||||| ||||||||||||||||| ||||| ||| ||||||||||||||||||||||||    
T  4477515 ccgtttggattggcttattttgagcttatgtgggcttatctactcccataagtcttttcaaaggtgtttgggtaaataaataaaaat 4477429  T

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Target: chr7; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 600 - 689
Target Start/End: Complemental strand, 33359288 - 33359198
Alignment:
Q  600 ggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||| || |||||||||||||||||||| ||||||||| ||||||| |||||| || ||||||||||||||||||||||||    
T  33359288 ggccccgtttggattggcttattttgagcttatgtgggcttatctacttccataagcctttttgaaggtgtttgggtaaataaataaaaat 33359198  T

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Target: chr7; HSP #11
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 601 - 689
Target Start/End: Original strand, 8630665 - 8630754
Alignment:
Q  601 gccccgtttggatg-gtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||  |||||||||||| ||||||||||| ||||||||||||||| ||||||||| ||||| ||||||||||||||||||    
T  8630665 gccccgtttggatttgtttattttgaggttatgtgggttgatctactcccataagcctttttaaaggtgttcgggtaaataaataaaaat 8630754  T

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Target: chr7; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 617 - 689
Target Start/End: Original strand, 1803042 - 1803114
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||| || |||||||||||||||||||||    
T  1803042 ttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtatttgggtaaataaataaaaat 1803114  T

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Target: chr7; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 598 - 689
Target Start/End: Original strand, 3511319 - 3511411
Alignment:
Q  598 aaggccccgtttggatggt-ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||| ||||||||||| || |||||||||||||||||||| ||||||||| ||||||| ||||||||| ||||||||||||||| ||||||||    
T  3511319 aaggtcccgtttggattgtcttattttgagcttatgtgggcttatctacttccataagcctttttaaaggtgtttgggtaaatagataaaaat 3511411  T

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Target: chr7; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 598 - 689
Target Start/End: Original strand, 6394747 - 6394839
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||| ||| || |||||||||||||||||||| ||||||| ||||||||| ||||||||| |||||||| |||||||||||||||    
T  6394747 aaggccccgtttagattggcttattttgagcttatgtgggcttatctattcccataagcctttttaaaggtgtttggataaataaataaaaat 6394839  T

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Target: chr7; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 602 - 689
Target Start/End: Original strand, 7164184 - 7164272
Alignment:
Q  602 ccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||| || ||||||||||||||| |||| |||||||||||||||||  |||||||| ||||||||||||||||||||||||    
T  7164184 ccccgtttggattggcttattttgagcttatatgggcttatctactcccataagtttttttaaaggtgtttgggtaaataaataaaaat 7164272  T

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Target: chr7; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 617 - 689
Target Start/End: Original strand, 37704996 - 37705068
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||||||| |||||||||| |||||| ||||||||| ||||||||||||||||||||||||    
T  37704996 ttattttgagcttatgtgggcttatctactctcataagcctttttaaaggtgtttgggtaaataaataaaaat 37705068  T

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Target: chr7; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 617 - 689
Target Start/End: Original strand, 38866560 - 38866632
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||||||||||||||||||||||||   |||||||| ||||||||||||||||||||||||    
T  38866560 ttattttgagcttatgtgggtttatctactcccataattttttttaaaggtgtttgggtaaataaataaaaat 38866632  T

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Target: chr7; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 617 - 689
Target Start/End: Original strand, 43156729 - 43156801
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||||||| ||||||| ||||||||| ||||||||| ||||||||||||||||||||||||    
T  43156729 ttattttgagcttatgtgggcttatctattcccataagcctttttaaaggtgtttgggtaaataaataaaaat 43156801  T

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Target: chr7; HSP #19
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 599 - 689
Target Start/End: Complemental strand, 24792531 - 24792440
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| || |||  |||||||||| |||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  24792531 aggccccgtttggattggcttaagttgagcttatctgggcttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 24792440  T

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Target: chr7; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 598 - 689
Target Start/End: Original strand, 42204150 - 42204243
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagac-tttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||| || |||||||||||||||||||| |||||||||| |||||| | |||||||| |||||||||||||||| |||||||    
T  42204150 aaggccccgtttggattggcttattttgagcttatgtgggcttatctactctcataagtcttttttaaaggtgtttgggtaaataagtaaaaat 42204243  T

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Target: chr7; HSP #21
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 598 - 689
Target Start/End: Original strand, 4347269 - 4347361
Alignment:
Q  598 aaggccccgtttggatggt-ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||| |  ||||||| |||||||||||| ||||||||||||||||   |||||||| ||||||||||||||||||||||||    
T  4347269 aaggccccgtttggattgacttattttaagcttatgtgggcttatctactcccataaacttttttaaaggtgtttgggtaaataaataaaaat 4347361  T

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Target: chr7; HSP #22
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 598 - 689
Target Start/End: Original strand, 5280856 - 5280948
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||| ||||||||||| || |||||||||||||||||| | ||||||| || |||||| ||||||||| ||||||||||||||||||||||||    
T  5280856 aaggtcccgtttggattggcttattttgagcttatgtgagcttatctattcacataagtctttttaaaggtgtttgggtaaataaataaaaat 5280948  T

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Target: chr7; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 598 - 689
Target Start/End: Original strand, 19828266 - 19828358
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||| || || |||||||||| |||||| || ||||||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  19828266 aaggccccgtttgaattggcttattttgagtttatgttggcttatctactcccataagcctttttaaaggtgtttggctaaataaataaaaat 19828358  T

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Target: chr7; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 598 - 688
Target Start/End: Original strand, 15655908 - 15655999
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaa 688  Q
    |||||||||||||||| || |||||||||||||||||||| |||||| ||| |||||| |||||| || ||||||||||||||||| |||||    
T  15655908 aaggccccgtttggattggcttattttgagcttatgtgggcttatctgctcgcataagcctttttgaaggtgtttgggtaaataaacaaaaa 15655999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 598 - 689
Target Start/End: Complemental strand, 36891029 - 36890938
Alignment:
Q  598 aaggccccgtttggatggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||| |  |  ||||||||||||| || |||||||||||||||||  |||||||| ||||||||||||||||||||||||    
T  36891029 aaggccccgtttggattgacttatttgagcttatgtaggcttatctactcccataagcttttttaaaggtgtttgggtaaataaataaaaat 36890938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 600 - 689
Target Start/End: Original strand, 25748485 - 25748575
Alignment:
Q  600 ggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||| || |||  |||||||||| |  ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  25748485 ggccccgtttggattggcttaagttgagcttatattagtttatctactcccataagtctttttaaaggtgtttgggtaaataaataaaaat 25748575  T

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Target: chr7; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 617 - 689
Target Start/End: Original strand, 933301 - 933373
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||| ||||||  ||||||||| ||||||| ||||||||| ||||||||||||||||||||||||    
T  933301 ttattttgagctcatgtggacttatctacttccataagcctttttaaaggtgtttgggtaaataaataaaaat 933373  T

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Target: chr7; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 617 - 689
Target Start/End: Complemental strand, 46134484 - 46134412
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||||| ||||||||||||| ||||  |||||||||  |||||||||||||||||||||||    
T  46134484 ttattttgagcttatgtgagtttatctactcctataactctttttaaagatgtttgggtaaataaataaaaat 46134412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 617 - 682
Target Start/End: Original strand, 42673481 - 42673546
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaa 682  Q
    |||||| ||||||||||||| |||||||||| |||||| ||||||||| |||||||||||||||||    
T  42673481 ttatttggagcttatgtgggcttatctactcgcataagcctttttaaaggtgtttgggtaaataaa 42673546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 613 - 689
Target Start/End: Complemental strand, 27691510 - 27691434
Alignment:
Q  613 tggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||  |||| |||| ||||||||||||||||  |||||||||  |||||||||||||||||||||||    
T  27691510 tggtttattttgaatttatatgggcttatctactcccataaatctttttaaagatgtttgggtaaataaataaaaat 27691434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 622 - 689
Target Start/End: Complemental strand, 12097765 - 12097698
Alignment:
Q  622 ttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||| || | |||||||||| |||||| ||||||||| ||||||||||||||||||||||||    
T  12097765 ttgagcttatatgagcttatctactctcataagcctttttaaaggtgtttgggtaaataaataaaaat 12097698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 617 - 689
Target Start/End: Original strand, 9452606 - 9452678
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||||||   ||||||| || |||||| ||||||||| |||||||||||||||| |||||||    
T  9452606 ttattttgagcttatgtgaacttatctattctcataagcctttttaaaggtgtttgggtaaataagtaaaaat 9452678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 598 - 689
Target Start/End: Complemental strand, 43021776 - 43021684
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||| ||||||| || ||||||| || ||||||||  ||||||||| | ||||| |||||||||  |||||||||||||||||||||||    
T  43021776 aaggccccatttggattggcttattttaagtttatgtggacttatctacttcaataagtctttttaaagatgtttgggtaaataaataaaaat 43021684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 617 - 689
Target Start/End: Original strand, 43405036 - 43405108
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||| ||||||||| || ||||||||||| ||||| ||||||||| | |||||||||||| |||||||||    
T  43405036 ttattttaagcttatgttggcttatctactcctataagtctttttaaaggcgtttgggtaaatcaataaaaat 43405108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 603 - 689
Target Start/End: Complemental strand, 46891535 - 46891447
Alignment:
Q  603 cccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaag-tgtttgggtaaataaataaaaat 689  Q
    ||||||||||| || ||||||||||||||| | || ||||||||||| ||||  |||||| |||| |||||||||||||||||||||||    
T  46891535 cccgtttggattggcttattttgagcttatataggcttatctactcctataaaccttttttaaaggtgtttgggtaaataaataaaaat 46891447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 598 - 689
Target Start/End: Complemental strand, 37006011 - 37005919
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||| |||||||||| || ||||||| |||||||||| ||||||||||| | |||||  |||||||| | |||||||||||| | |||||||    
T  37006011 aaggctccgtttggattggcttattttaagcttatgtgagtttatctacttctataagtttttttaaaggcgtttgggtaaatcagtaaaaat 37005919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 617 - 689
Target Start/End: Original strand, 17753616 - 17753688
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||    | ||||||||||| ||||| |||||  || ||||||||||||||||||||||||    
T  17753616 ttattttgagcttatacaagcttatctactcctataagccttttagaaggtgtttgggtaaataaataaaaat 17753688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 638 - 689
Target Start/End: Complemental strand, 16894666 - 16894615
Alignment:
Q  638 ttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||||  |||||||| || |||||||||| ||||||||||    
T  16894666 ttatctactcccataagcttttttaaaggtatttgggtaaacaaataaaaat 16894615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 562 - 599
Target Start/End: Complemental strand, 22851588 - 22851551
Alignment:
Q  562 ttagaatttatcacgtgatgtcattaaagggagttcaa 599  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  22851588 ttagaatttatcacgtgatgttactaaagggagttcaa 22851551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 657 - 689
Target Start/End: Original strand, 48865689 - 48865721
Alignment:
Q  657 tttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||| ||||||||||||||||||||||||    
T  48865689 tttttaaaggtgtttgggtaaataaataaaaat 48865721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 1e-30; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 598 - 689
Target Start/End: Complemental strand, 9008267 - 9008175
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||| || |||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  9008267 aaggccccgtttggattggcttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 9008175  T

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Target: chr5; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 598 - 689
Target Start/End: Complemental strand, 33491406 - 33491314
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||    
T  33491406 aaggccccgtttggattggcttattttgagcttatgtgggtttatctactctcataagcctttttaaaggtgtttgggtaaataaataaaaat 33491314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 597 - 689
Target Start/End: Original strand, 4120934 - 4121027
Alignment:
Q  597 caaggccccgtttgga-tggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||| |||||||    
T  4120934 caaggccccgtttggaatggcttattttgagcttatgtgggtttatctactcccataagcccttttaaaggtgtttgggtaaataagtaaaaat 4121027  T

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Target: chr5; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 598 - 689
Target Start/End: Complemental strand, 24105881 - 24105789
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||| |||||||||| || |||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  24105881 aaggctccgtttggattggcttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 24105789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 599 - 689
Target Start/End: Original strand, 1579035 - 1579126
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| || ||||||||||||||| |||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  1579035 aggccccgtttggattggcttattttgagcttatatgggcttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 1579126  T

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Target: chr5; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 599 - 689
Target Start/End: Complemental strand, 1605780 - 1605689
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| || ||||||||||||||| |||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  1605780 aggccccgtttggattggcttattttgagcttatatgggcttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 1605689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 599 - 689
Target Start/End: Complemental strand, 27679378 - 27679287
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| || |||||||||||||||||||| |||||||||| |||||| ||||||||| ||||||||||||||||||||||||    
T  27679378 aggccccgtttggattggcttattttgagcttatgtgggcttatctactctcataagcctttttaaaggtgtttgggtaaataaataaaaat 27679287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 598 - 689
Target Start/End: Original strand, 19358524 - 19358616
Alignment:
Q  598 aaggccccgtttggatggt-ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||| |  |||||||||||||||||| | ||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  19358524 aaggccccgtttggattgccttattttgagcttatgtgagcttatctactcctataagcctttttaaaagtgtttgggtaaataaataaaaat 19358616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 598 - 689
Target Start/End: Original strand, 27420856 - 27420948
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||| || ||||||||||||||| |||| ||||||||||||||||| ||||||||| ||||||| ||||||||||||||||    
T  27420856 aaggccccgtttggattggcttattttgagcttatatgggcttatctactcccataagcctttttaaaggtgtttgagtaaataaataaaaat 27420948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 598 - 689
Target Start/End: Complemental strand, 35782854 - 35782762
Alignment:
Q  598 aaggccccgtttggatggt-ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||| |  |||||||||||||||||||| |||||||||| |||||| ||||||||| ||||||||||||||||||||||||    
T  35782854 aaggccccgtttggattgccttattttgagcttatgtgggcttatctactcgcataagcctttttaaaggtgtttgggtaaataaataaaaat 35782762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 600 - 689
Target Start/End: Original strand, 5202972 - 5203062
Alignment:
Q  600 ggccccgtttggatggt-ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||| |  |||||||||| |||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  5202972 ggccccgtttggattgacttattttgagtttatgttggtttatctactcccataagtctttttaaaggtgtttgggtaaataaataaaaat 5203062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 598 - 689
Target Start/End: Complemental strand, 20992356 - 20992264
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||| || || |||||||||||||||||||  ||||||||||| ||||| ||||||||| ||||||||||||||||||||||||    
T  20992356 aaggccccgtttgaattggcttattttgagcttatgtggtcttatctactcctataagtctttttaaaggtgtttgggtaaataaataaaaat 20992264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 599 - 689
Target Start/End: Complemental strand, 8374547 - 8374456
Alignment:
Q  599 aggccccgtttggatggt-ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| |  ||||||| |||||||||||| ||||||||| ||||||| ||||||||| ||||||||||||||||||||||||    
T  8374547 aggccccgtttggattgccttattttaagcttatgtgggcttatctacttccataagcctttttaaaggtgtttgggtaaataaataaaaat 8374456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 617 - 689
Target Start/End: Complemental strand, 1165791 - 1165719
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||||| | ||||||||| ||||||| ||||||||| ||||||||||||||||||||||||    
T  1165791 ttattttgagcttatgtgagcttatctacttccataagcctttttaaaggtgtttgggtaaataaataaaaat 1165719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 617 - 689
Target Start/End: Complemental strand, 3386676 - 3386604
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||||||  |||||||||| |||||| ||||||||| ||||||||||||||||||||||||    
T  3386676 ttattttgagcttatgtggacttatctactctcataagcctttttaaaggtgtttgggtaaataaataaaaat 3386604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 598 - 689
Target Start/End: Original strand, 3921579 - 3921671
Alignment:
Q  598 aaggccccgtttggatgg-tttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||| ||||||||||| | ||||||||||| |||| |||| ||||||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  3921579 aaggtcccgtttggattgatttattttgagtttatatgggcttatctactcccataagtctttttaaaggtgtttggataaataaataaaaat 3921671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 617 - 689
Target Start/End: Original strand, 16069371 - 16069443
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||||| || ||||||||||||||||| ||||||||| ||||||| ||||||||||||||||    
T  16069371 ttattttgagcttatgtaggcttatctactcccataagcctttttaaaggtgtttgagtaaataaataaaaat 16069443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 617 - 689
Target Start/End: Complemental strand, 16737637 - 16737565
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| |||| ||||||||||||||||  ||||||||| ||||||||||||||||||||||||    
T  16737637 ttattttgagcttatatgggcttatctactcccataaacctttttaaaggtgtttgggtaaataaataaaaat 16737565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 617 - 689
Target Start/End: Original strand, 31883162 - 31883234
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||||||  |||||||||| |||||| ||||||||| ||||||||||||||||||||||||    
T  31883162 ttattttgagcttatgtggacttatctactctcataagtctttttaaaggtgtttgggtaaataaataaaaat 31883234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 598 - 689
Target Start/End: Complemental strand, 20992495 - 20992399
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgt----gggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||| |||||||| || |||||||||||||||||    ||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  20992495 aaggccctgtttggattggcttattttgagcttatgtacatgggcttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 20992399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 617 - 689
Target Start/End: Complemental strand, 33284765 - 33284693
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| |||| ||||||||||||||||| ||||||||| ||||||  ||||||||||||||||    
T  33284765 ttattttgagcttatatgggcttatctactcccataagcctttttaaaggtgtttaagtaaataaataaaaat 33284693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 617 - 689
Target Start/End: Original strand, 33991158 - 33991230
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||| ||||||||  ||||||||| ||||||| ||||||||| ||||||||||||||||||||||||    
T  33991158 ttattttgagtttatgtggacttatctacttccataagcctttttaaaggtgtttgggtaaataaataaaaat 33991230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 600 - 689
Target Start/End: Original strand, 31410476 - 31410566
Alignment:
Q  600 ggccccgtttggatgg-tttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||| ||||||||| | ||||||||||| |||| ||||||||||||| |||||||| ||||||||| ||||||| ||||| ||||||||||    
T  31410476 ggccgcgtttggattgatttattttgagtttatatgggtttatctacccccataagtctttttaaaggtgtttgagtaaacaaataaaaat 31410566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 638 - 689
Target Start/End: Complemental strand, 26603111 - 26603060
Alignment:
Q  638 ttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  26603111 ttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 26603060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 599 - 689
Target Start/End: Complemental strand, 38598659 - 38598568
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||| |||||||| || ||| ||||| |||||||| | |||||||||| |||||| ||||||||| |||||||||||||||| |||||||    
T  38598659 aggcccggtttggattggcttactttgaacttatgtgagcttatctactctcataagcctttttaaatgtgtttgggtaaataagtaaaaat 38598568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 644 - 689
Target Start/End: Original strand, 27025001 - 27025046
Alignment:
Q  644 actcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||||||||  |||| ||||||||||||||||||    
T  27025001 actcccataagactttttaaagatgttcgggtaaataaataaaaat 27025046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 560 - 599
Target Start/End: Original strand, 10585693 - 10585732
Alignment:
Q  560 atttagaatttatcacgtgatgtcattaaagggagttcaa 599  Q
    ||||||||||||||| ||||||| ||||||||||||||||    
T  10585693 atttagaatttatcatgtgatgttattaaagggagttcaa 10585732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 1e-30; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 598 - 689
Target Start/End: Complemental strand, 15520338 - 15520246
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||| || |||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  15520338 aaggccccgtttggattggcttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 15520246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 599 - 689
Target Start/End: Original strand, 29445481 - 29445572
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| || |||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  29445481 aggccccgtttggattggcttattttgagcttatgtgagtttatctactcccataagcctttttaaatgtgtttgggtaaataaataaaaat 29445572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 599 - 689
Target Start/End: Complemental strand, 37698338 - 37698247
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| || |||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  37698338 aggccccgtttggattggcttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 37698247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 598 - 689
Target Start/End: Complemental strand, 42308101 - 42308009
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||| || |||||||||||||||||||| ||||||||||||||||| ||||||||| | ||||||||||||||||||||||    
T  42308101 aaggccccgtttggattggcttattttgagcttatgtgggcttatctactcccataagcctttttaaaggcgtttgggtaaataaataaaaat 42308009  T

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Target: chr3; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 599 - 689
Target Start/End: Complemental strand, 54534521 - 54534430
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| || |||||||||||||||||||| |||||||||||||||||  |||||||| ||||||||||||||||||||||||    
T  54534521 aggccccgtttggattggcttattttgagcttatgtgggcttatctactcccataagcttttttaaaggtgtttgggtaaataaataaaaat 54534430  T

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Target: chr3; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 599 - 689
Target Start/End: Complemental strand, 54870369 - 54870278
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| || |||||||||| ||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||    
T  54870369 aggccccgtttggattggcttattttgagtttatgtgggtttatctacttccataagcctttttaaaggtgtttgggtaaataaataaaaat 54870278  T

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Target: chr3; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 600 - 689
Target Start/End: Complemental strand, 25494479 - 25494389
Alignment:
Q  600 ggccccgtttggatggt-ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||| |  |||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||    
T  25494479 ggccccgtttggattgacttattttgagcttatgtgggtttatctattcccataagtctttttaaaggtgtttgggtaaataaataaaaat 25494389  T

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Target: chr3; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 600 - 689
Target Start/End: Original strand, 25999382 - 25999472
Alignment:
Q  600 ggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||| || |||||||||||||||||||| ||||||||| ||||||| ||||||||| ||||||||||||||||||||||||    
T  25999382 ggccccgtttggattggcttattttgagcttatgtgggcttatctacttccataagcctttttaaaggtgtttgggtaaataaataaaaat 25999472  T

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Target: chr3; HSP #9
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 617 - 689
Target Start/End: Original strand, 21581054 - 21581126
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  21581054 ttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 21581126  T

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Target: chr3; HSP #10
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 598 - 689
Target Start/End: Original strand, 32244112 - 32244204
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||| ||||||||||| || ||||||||||||||||||| |||||||||| ||||||| ||||||||| ||||||||||||||||||||||||    
T  32244112 aaggtcccgtttggattggcttattttgagcttatgtggatttatctacttccataagcctttttaaaggtgtttgggtaaataaataaaaat 32244204  T

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Target: chr3; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 617 - 688
Target Start/End: Original strand, 2895197 - 2895268
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaa 688  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||    
T  2895197 ttattttgagcttatgtgggtttatctactcgcataagcctttttaaaggtgtttgggtaaataaataaaaa 2895268  T

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Target: chr3; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 598 - 688
Target Start/End: Complemental strand, 20842544 - 20842453
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaa 688  Q
    |||||||||||||||| || |||||||||||||||||| | |||||||||| |||||| ||||||||| |||||||||||||||||||||||    
T  20842544 aaggccccgtttggattggcttattttgagcttatgtgagcttatctactcgcataagcctttttaaaggtgtttgggtaaataaataaaaa 20842453  T

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Target: chr3; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 599 - 689
Target Start/End: Original strand, 34700334 - 34700425
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||| ||| |||||||||||||||||||||||||||| |||| ||||||| ||||||||| ||||||| ||||||||||||||||    
T  34700334 aggccccgtttagattggtttattttgagcttatgtgggtttatttacttccataagcctttttaaaggtgtttgagtaaataaataaaaat 34700425  T

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Target: chr3; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 599 - 688
Target Start/End: Original strand, 15520629 - 15520719
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaa 688  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||| |||||| |||||| || ||||||||||||||||| |||||    
T  15520629 aggccccgtttggattggcttattttgagcttatgtgggtttatctactcgcataagcctttttgaaggtgtttgggtaaataaacaaaaa 15520719  T

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Target: chr3; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 599 - 688
Target Start/End: Complemental strand, 22175185 - 22175095
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaa 688  Q
    ||||||||||||||| || |||||||||||||||||||| |||||||||| |||||| |||||| || |||||||||||||||||||||||    
T  22175185 aggccccgtttggattggcttattttgagcttatgtgggcttatctactcgcataagcctttttgaaggtgtttgggtaaataaataaaaa 22175095  T

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Target: chr3; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 599 - 688
Target Start/End: Original strand, 50528922 - 50529012
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaa 688  Q
    ||||||||||||||| || |||||||||||||||||||| |||||||||| |||||| |||||| || |||||||||||||||||||||||    
T  50528922 aggccccgtttggattggcttattttgagcttatgtgggcttatctactcgcataagcctttttgaaggtgtttgggtaaataaataaaaa 50529012  T

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Target: chr3; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 598 - 689
Target Start/End: Original strand, 8042599 - 8042691
Alignment:
Q  598 aaggccccgtttggatggt-ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||||||  |||||||||||||||||| | ||||||||| ||||||| ||||||||| |||||||||||||||| |||||||    
T  8042599 aaggccccgtttggatgggcttattttgagcttatgtgagcttatctacttccataagcctttttaaaggtgtttgggtaaataagtaaaaat 8042691  T

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Target: chr3; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 598 - 689
Target Start/End: Complemental strand, 12117854 - 12117762
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||| || || |||||||||||||||||||| ||||||| ||||||||| ||||||||| |||||||| |||||||||||||||    
T  12117854 aaggccccgtttgaattggcttattttgagcttatgtgggcttatctattcccataagcctttttaaaggtgtttggataaataaataaaaat 12117762  T

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Target: chr3; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 602 - 689
Target Start/End: Original strand, 38856089 - 38856177
Alignment:
Q  602 ccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||| || ||||||||||||||| |||| |||||||||||||||||  |||||||| ||||||||||||||||||||||||    
T  38856089 ccccgtttggattggcttattttgagcttatatgggcttatctactcccataagcttttttaaaggtgtttgggtaaataaataaaaat 38856177  T

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Target: chr3; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 599 - 689
Target Start/End: Complemental strand, 46452357 - 46452266
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| || |||  |||||||||| |||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  46452357 aggccccgtttggattggcttaagttgagcttatatgggcttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 46452266  T

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Target: chr3; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 600 - 689
Target Start/End: Original strand, 26122808 - 26122898
Alignment:
Q  600 ggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||| |||||||| || |||||||||||||||||||||||||||| |||||| || ||||||||| |||||||| |||||||||||||||    
T  26122808 ggcccagtttggattggcttattttgagcttatgtgggtttatctattcccatgagcctttttaaaggtgtttggataaataaataaaaat 26122898  T

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Target: chr3; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 599 - 688
Target Start/End: Original strand, 38933939 - 38934028
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaa 688  Q
    ||||||||||||||| || ||||||||||||||||||| || ||||||||||||||| ||||| ||| |||||||||||||||||||||||    
T  38933939 aggccccgtttggattggcttattttgagcttatgtggctt-atctactcccataagccttttcaaaggtgtttgggtaaataaataaaaa 38934028  T

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Target: chr3; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 601 - 688
Target Start/End: Original strand, 20699144 - 20699232
Alignment:
Q  601 gccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaa 688  Q
    ||||||||||||| || |||||||||||||||||||| |||||||||| |||||| |||||| || ||||||||||||||||| |||||    
T  20699144 gccccgtttggattggcttattttgagcttatgtgggcttatctactcgcataagcctttttgaaggtgtttgggtaaataaacaaaaa 20699232  T

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Target: chr3; HSP #24
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 617 - 689
Target Start/End: Complemental strand, 50529949 - 50529877
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||| ||||||||  ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  50529949 ttattttgagtttatgtggacttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 50529877  T

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Target: chr3; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 618 - 687
Target Start/End: Original strand, 35226460 - 35226529
Alignment:
Q  618 tattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaa 687  Q
    ||||||||||||||||||| ||||||| | ||||||| ||||||||| ||||||||||||||||||||||    
T  35226460 tattttgagcttatgtgggcttatctatttccataagcctttttaaaggtgtttgggtaaataaataaaa 35226529  T

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Target: chr3; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 599 - 689
Target Start/End: Complemental strand, 24835894 - 24835803
Alignment:
Q  599 aggccccgtttggatgg-tttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| | |||||||||||||||| | |  ||||| ||||||||||| ||||||||| |||||||| |||||||||||||||    
T  24835894 aggccccgtttggattgatttattttgagcttatatagacttatcaactcccataagcctttttaaaggtgtttggataaataaataaaaat 24835803  T

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Target: chr3; HSP #27
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 601 - 689
Target Start/End: Original strand, 35643212 - 35643301
Alignment:
Q  601 gccccgtttggatggt-ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||| |  ||||||||||||||||||   ||||||||| ||||||| ||||||||| ||| ||||||||||||||||||||    
T  35643212 gccccgtttggattgacttattttgagcttatgtgaacttatctacttccataagcctttttaaaggtgcttgggtaaataaataaaaat 35643301  T

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Target: chr3; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 598 - 689
Target Start/End: Original strand, 32359251 - 32359343
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||| ||||||||||| || ||||||||||||||||||| |||||||| | |||||||  ||| |||| ||||||| ||||||||||||||||    
T  32359251 aaggtcccgtttggattggcttattttgagcttatgtggatttatctatttccataagcttttataaaggtgtttgagtaaataaataaaaat 32359343  T

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Target: chr3; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 617 - 689
Target Start/End: Complemental strand, 42105147 - 42105075
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||||||| ||||||||||||||||   |||||||| |||||||| |||| ||||||||||    
T  42105147 ttattttgagcttatgtgggcttatctactcccataaacatttttaaaggtgtttggataaaaaaataaaaat 42105075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 598 - 689
Target Start/End: Original strand, 49128041 - 49128133
Alignment:
Q  598 aaggccccgtttggatggt-ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||| |  ||||||| | |||||||||| ||||||||||| ||||| |||||||||  ||||||||||||| |||||||||    
T  49128041 aaggccccgtttggattgacttattttaaacttatgtgggcttatctactcctataagtctttttaaagatgtttgggtaaatcaataaaaat 49128133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 617 - 688
Target Start/End: Complemental strand, 44609509 - 44609438
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaa 688  Q
    |||||||||||||||||||  |||||||||  |||||| |||||| || |||||||||||||||||||||||    
T  44609509 ttattttgagcttatgtggacttatctacttgcataagcctttttgaaggtgtttgggtaaataaataaaaa 44609438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 626 - 689
Target Start/End: Original strand, 44688782 - 44688845
Alignment:
Q  626 gcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||||||||| ||||||| |||||||||  ||||||| |||||||||||||||    
T  44688782 gcttatgtgggtttatctacttccataagcctttttaaagatgtttggataaataaataaaaat 44688845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 617 - 689
Target Start/End: Complemental strand, 48925177 - 48925107
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||| ||| |||| |||||||||||||| |||||||  |||||||||  ||||||||||||||||||||||    
T  48925177 ttatttagagtttatatgggtttatctacttccataagcttttttaaaa--gtttgggtaaataaataaaaat 48925107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 638 - 689
Target Start/End: Original strand, 16354379 - 16354430
Alignment:
Q  638 ttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||| | |||||| ||||||||| ||||||||||||||||||||||||    
T  16354379 ttatctacactcataagtctttttaaaggtgtttgggtaaataaataaaaat 16354430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 542 - 596
Target Start/End: Complemental strand, 30600500 - 30600446
Alignment:
Q  542 ttagttctttgttggcccatttagaatttatcacgtgatgtcattaaagggagtt 596  Q
    ||||||||||||||||| |||||||||||||||| |||| | | |||||||||||    
T  30600500 ttagttctttgttggcctatttagaatttatcacatgattttagtaaagggagtt 30600446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 617 - 654
Target Start/End: Original strand, 24366104 - 24366141
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataag 654  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  24366104 ttattttgagcttatgtgggtttatctactcgcataag 24366141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 617 - 662
Target Start/End: Original strand, 53028237 - 53028282
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagacttttta 662  Q
    |||||||||||||||||||| ||||||| ||||||||| |||||||    
T  53028237 ttattttgagcttatgtgggcttatctattcccataagtcttttta 53028282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 547 - 581
Target Start/End: Original strand, 27456363 - 27456397
Alignment:
Q  547 tctttgttggcccatttagaatttatcacgtgatg 581  Q
    |||||||||||||||||||||||||||||| ||||    
T  27456363 tctttgttggcccatttagaatttatcacgcgatg 27456397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 628 - 689
Target Start/End: Original strand, 12915930 - 12915990
Alignment:
Q  628 ttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||| |||| |||||| ||||  ||||||||| |||||||| |||||||||||||||    
T  12915930 ttatgtgggcttatttactcc-ataaatctttttaaaggtgtttggataaataaataaaaat 12915990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 5e-30; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 599 - 689
Target Start/End: Original strand, 1168499 - 1168590
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| || |||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  1168499 aggccccgtttggattggcttattttgagcttatgtgggcttatctactcccataagtctttttaaaggtgtttgggtaaataaataaaaat 1168590  T

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Target: chr1; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 598 - 689
Target Start/End: Original strand, 32671574 - 32671666
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||| || ||||||||||||||||||| |||||||||||||||||| |||||||||  |||||||||||||||||||||||    
T  32671574 aaggccccgtttggattggcttattttgagcttatgtggatttatctactcccataagcctttttaaagatgtttgggtaaataaataaaaat 32671666  T

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Target: chr1; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 599 - 689
Target Start/End: Complemental strand, 1940956 - 1940865
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| || ||||||||||||||| |||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  1940956 aggccccgtttggattggcttattttgagcttatatgggcttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 1940865  T

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Target: chr1; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 599 - 689
Target Start/End: Original strand, 29288145 - 29288236
Alignment:
Q  599 aggccccgtttggatggt-ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| |  |||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  29288145 aggccccgtttggattgacttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 29288236  T

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Target: chr1; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 599 - 689
Target Start/End: Complemental strand, 39260555 - 39260464
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| || |||||||||||||||||||| |||||||||||||||||  |||||||| ||||||||||||||||||||||||    
T  39260555 aggccccgtttggattggcttattttgagcttatgtgggcttatctactcccataagcatttttaaaggtgtttgggtaaataaataaaaat 39260464  T

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Target: chr1; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 599 - 689
Target Start/End: Complemental strand, 52753356 - 52753265
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| || |||||||||||||||||||| |||||||||||||||||  |||||||| ||||||||||||||||||||||||    
T  52753356 aggccccgtttggattggcttattttgagcttatgtgggcttatctactcccataagcatttttaaaggtgtttgggtaaataaataaaaat 52753265  T

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Target: chr1; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 600 - 689
Target Start/End: Complemental strand, 970734 - 970644
Alignment:
Q  600 ggccccgtttggatggt-ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||| |  |||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  970734 ggccccgtttggattgacttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 970644  T

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Target: chr1; HSP #8
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 598 - 689
Target Start/End: Original strand, 20089466 - 20089558
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||| || |||||||||||||||||||| |||||||||||||||||  |||||||| |||||| |||||||||||||||||    
T  20089466 aaggccccgtttggattggcttattttgagcttatgtgggcttatctactcccataagcatttttaaaggtgtttaggtaaataaataaaaat 20089558  T

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Target: chr1; HSP #9
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 602 - 689
Target Start/End: Original strand, 26663257 - 26663345
Alignment:
Q  602 ccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||| || |||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  26663257 ccccgtttggattggcttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgtttggataaataaataaaaat 26663345  T

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Target: chr1; HSP #10
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 617 - 689
Target Start/End: Original strand, 29078531 - 29078603
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  29078531 ttattttgagcttatgtgggcttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 29078603  T

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Target: chr1; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 599 - 689
Target Start/End: Original strand, 2347652 - 2347743
Alignment:
Q  599 aggccccgtttggatg-gtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||  |||||||||||| ||||| ||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  2347652 aggccccgtttggatttgtttattttgagtttatgcgggcttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 2347743  T

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Target: chr1; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 603 - 689
Target Start/End: Original strand, 2473722 - 2473809
Alignment:
Q  603 cccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||| ||||||||||||||||||||||| |||||||| ||||||||  |||||||| ||||||||||||||||||||||||    
T  2473722 cccgtttggatcggtttattttgagcttatgtgggcttatctacgcccataagcttttttaaaggtgtttgggtaaataaataaaaat 2473809  T

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Target: chr1; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 603 - 689
Target Start/End: Complemental strand, 8079914 - 8079827
Alignment:
Q  603 cccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||| || |||||||||||||||||||| |||||||||| |||||| ||||||||| ||||||||||||||||||||||||    
T  8079914 cccgtttggattggcttattttgagcttatgtgggcttatctactctcataagcctttttaaaggtgtttgggtaaataaataaaaat 8079827  T

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Target: chr1; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 599 - 689
Target Start/End: Original strand, 25897370 - 25897461
Alignment:
Q  599 aggccccgtttggatggt-ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| |  ||||||||||||||||||||  |||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  25897370 aggccccgtttggattgacttattttgagcttatgtgggcatatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 25897461  T

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Target: chr1; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 599 - 689
Target Start/End: Complemental strand, 26580479 - 26580388
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| || |||||||||||||||||||| ||||||| ||||||||| ||||||||| |||||||||||| |||||||||||    
T  26580479 aggccccgtttggattggcttattttgagcttatgtgggcttatctattcccataagcctttttaaaggtgtttgggtaagtaaataaaaat 26580388  T

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Target: chr1; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 599 - 688
Target Start/End: Complemental strand, 1170653 - 1170563
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaa 688  Q
    ||||||||||||||| || ||||||||||||| |||||| ||||||||| ||||||| ||||||||| |||||||||||||||||||||||    
T  1170653 aggccccgtttggattggcttattttgagcttttgtgggcttatctacttccataagcctttttaaaggtgtttgggtaaataaataaaaa 1170563  T

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Target: chr1; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 600 - 688
Target Start/End: Complemental strand, 42371003 - 42370914
Alignment:
Q  600 ggccccgtttggatggt-ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaa 688  Q
    |||||||||||||| |  |||||||||||||||||| | ||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  42371003 ggccccgtttggattgacttattttgagcttatgtgagcttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaa 42370914  T

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Target: chr1; HSP #18
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 597 - 689
Target Start/End: Original strand, 43905648 - 43905741
Alignment:
Q  597 caaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||| |||||||||| || ||||||||||||||| |||| ||||||||||| ||||| ||||||||| ||||||||||||||||||||||||    
T  43905648 caaggctccgtttggattggcttattttgagcttatttgggcttatctactcctataagcctttttaaaggtgtttgggtaaataaataaaaat 43905741  T

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Target: chr1; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 617 - 689
Target Start/End: Original strand, 12682835 - 12682907
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||| ||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  12682835 ttattttgagtttatgtgggcttatctactcccataagtctttttaaaggtgtttgggtaaataaataaaaat 12682907  T

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Target: chr1; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 598 - 689
Target Start/End: Original strand, 16052091 - 16052183
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||| || |||||||||| ||||||||| ||||||||| |||||||  |||||||| ||||||||||||||||||||||||    
T  16052091 aaggccccgtttggattggcttattttgagtttatgtgggcttatctacttccataagcttttttaaaggtgtttgggtaaataaataaaaat 16052183  T

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Target: chr1; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 598 - 689
Target Start/End: Original strand, 49146167 - 49146259
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||| |||||||||| |||||||||||||||||||||| ||||| ||||||||||||  |||||||| |||||||| |||||||||||||||    
T  49146167 aaggctccgtttggattggtttattttgagcttatgtggatttatatactcccataagtttttttaaaggtgtttggataaataaataaaaat 49146259  T

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Target: chr1; HSP #22
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 599 - 689
Target Start/End: Complemental strand, 15554353 - 15554262
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| || |||  |||||||||| |||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  15554353 aggccccgtttggattggcttaagttgagcttatatgggcttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 15554262  T

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Target: chr1; HSP #23
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 603 - 689
Target Start/End: Complemental strand, 19715366 - 19715279
Alignment:
Q  603 cccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||| ||||||||||||||||||||| | ||||||||||| ||||| ||||||||| |||||||| |||||||||||||||    
T  19715366 cccgtttggattggtttattttgagcttatgtgagcttatctactcctataagcctttttaaaggtgtttggataaataaataaaaat 19715279  T

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Target: chr1; HSP #24
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 599 - 689
Target Start/End: Original strand, 33510480 - 33510571
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| || ||||||||||||||| || | ||||||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  33510480 aggccccgtttggattggcttattttgagcttatatgagcttatctactcccataagtctttttaaaggtgtttggataaataaataaaaat 33510571  T

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Target: chr1; HSP #25
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 599 - 689
Target Start/End: Complemental strand, 41928704 - 41928613
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| || ||||||||| |||||||||  ||||||||||| ||||| ||||||||| ||||||||||||||||||||||||    
T  41928704 aggccccgtttggattggcttattttgaacttatgtggacttatctactcctataagcctttttaaaggtgtttgggtaaataaataaaaat 41928613  T

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Target: chr1; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 604 - 688
Target Start/End: Original strand, 8120870 - 8120955
Alignment:
Q  604 ccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaa 688  Q
    |||||||||| || |||||||||||||||||||  |||||||||| |||||| ||||||||| |||||||||||||||||||||||    
T  8120870 ccgtttggattggcttattttgagcttatgtggacttatctactcgcataagcctttttaaaggtgtttgggtaaataaataaaaa 8120955  T

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Target: chr1; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 600 - 688
Target Start/End: Original strand, 52696788 - 52696877
Alignment:
Q  600 ggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaa 688  Q
    |||||||||||||| || |||||||||||||||||||| |||||||||| |||||| |||||| || ||||||||||||||||| |||||    
T  52696788 ggccccgtttggattggcttattttgagcttatgtgggcttatctactcgcataagcctttttgaaggtgtttgggtaaataaacaaaaa 52696877  T

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Target: chr1; HSP #28
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 598 - 689
Target Start/End: Complemental strand, 13996933 - 13996841
Alignment:
Q  598 aaggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||| |||||||| || |||||||||  ||||||||||||||||||||||||||| |||||||||  ||||||| |||||||||||||||    
T  13996933 aaggccctgtttggattggcttattttgaaattatgtgggtttatctactcccataagcctttttaaagatgtttggataaataaataaaaat 13996841  T

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Target: chr1; HSP #29
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 617 - 689
Target Start/End: Original strand, 15203127 - 15203199
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||| ||||| |||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||    
T  15203127 ttattttaagcttttgtgggtttatctactcccataagcctttttaaaggtgttagggtaaataaataaaaat 15203199  T

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Target: chr1; HSP #30
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 617 - 689
Target Start/End: Original strand, 38829084 - 38829156
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||||| || ||||||||| ||||||| ||||||||| ||||||||||||||||||||||||    
T  38829084 ttattttgagcttatgtcggcttatctacttccataagcctttttaaaggtgtttgggtaaataaataaaaat 38829156  T

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Target: chr1; HSP #31
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 617 - 689
Target Start/End: Original strand, 40092506 - 40092578
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| || | ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  40092506 ttattttgagcttatatgagcttatctactcccataagtctttttaaaggtgtttgggtaaataaataaaaat 40092578  T

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Target: chr1; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 602 - 689
Target Start/End: Original strand, 5215384 - 5215472
Alignment:
Q  602 ccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||| || |||||||||||||||||||| |||||||||  |||||| |||||||||  ||||||||||||||| |||||||    
T  5215384 ccccgtttggattggcttattttgagcttatgtgggcttatctactttcataagcctttttaaagatgtttgggtaaataagtaaaaat 5215472  T

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Target: chr1; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 602 - 689
Target Start/End: Original strand, 6765458 - 6765546
Alignment:
Q  602 ccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||| || |||||||||| |||||||  ||||||||||   ||||| ||||||||||||||||||||||||||||||||||    
T  6765458 ccccgtttggattggcttattttgagtttatgtgaatttatctacttttataagcctttttaaaagtgtttgggtaaataaataaaaat 6765546  T

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Target: chr1; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 617 - 689
Target Start/End: Original strand, 46409450 - 46409522
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||||||  ||||||| || |||||| ||||||||| ||||||||||||||||||||||||    
T  46409450 ttattttgagcttatgtggacttatctaatctcataagcctttttaaaggtgtttgggtaaataaataaaaat 46409522  T

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Target: chr1; HSP #35
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 620 - 689
Target Start/End: Original strand, 7145226 - 7145294
Alignment:
Q  620 ttttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||  |||||||||||||||||| ||||||||||||| ||||||||||||| ||||||    
T  7145226 ttttgagcttatgtgtatttatctactcccataagcctttttaaaagtg-ttgggtaaataaacaaaaat 7145294  T

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Target: chr1; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 617 - 689
Target Start/End: Original strand, 23498475 - 23498547
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||| |||||||||||| ||||||||| ||| ||| |||||| || ||||||||||||||||||||||||    
T  23498475 ttattttaagcttatgtgggcttatctacttccacaagcctttttcaaggtgtttgggtaaataaataaaaat 23498547  T

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Target: chr1; HSP #37
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 617 - 689
Target Start/End: Original strand, 52086282 - 52086354
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||| ||||||||||||||||||| |||||||||  ||||||||| |||||||||||||| | |||||||    
T  52086282 ttattttaagcttatgtgggtttatctgctcccataaacctttttaaaggtgtttgggtaaatcagtaaaaat 52086354  T

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Target: chr1; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 599 - 688
Target Start/End: Original strand, 17591687 - 17591774
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaa 688  Q
    ||||||||||||||| || |||||  |||||||||||| || ||||||||||||||| ||||| ||| |||||||||||||||||||||||    
T  17591687 aggccccgtttggattggcttatt--gagcttatgtggctt-atctactcccataagccttttcaaaggtgtttgggtaaataaataaaaa 17591774  T

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Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 618 - 688
Target Start/End: Complemental strand, 17587694 - 17587624
Alignment:
Q  618 tattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaa 688  Q
    ||||||||||||||||| | ||||||| || |||||| ||||||||| |||||||| ||||||||||||||    
T  17587694 tattttgagcttatgtgagcttatctattcgcataagcctttttaaaggtgtttggctaaataaataaaaa 17587624  T

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Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 617 - 689
Target Start/End: Original strand, 46760981 - 46761053
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||| ||||| || | |||||||||  |||||| ||||||||| ||||||||||||||||||||||||    
T  46760981 ttattttgaacttatatgagcttatctacttgcataagcctttttaaaggtgtttgggtaaataaataaaaat 46761053  T

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Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 536 - 599
Target Start/End: Original strand, 12542902 - 12542965
Alignment:
Q  536 aaaggtttagttctttgttggcccatttagaatttatcacgtgatgtcattaaagggagttcaa 599  Q
    ||||| ||||||||||||||| ||||||| |||||||||||||||||  || ||||||||||||    
T  12542902 aaaggcttagttctttgttggtccatttaaaatttatcacgtgatgttttttaagggagttcaa 12542965  T

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Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 638 - 689
Target Start/End: Original strand, 40149499 - 40149550
Alignment:
Q  638 ttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||||  |||||||| ||||||||||||||||||||||||    
T  40149499 ttatctactcccataagcttttttaaaggtgtttgggtaaataaataaaaat 40149550  T

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Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 601 - 689
Target Start/End: Original strand, 29695673 - 29695763
Alignment:
Q  601 gccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataa-gactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||| |||||||| || |||||||||||||| ||||| ||||||||||||||||    |||||||| |||||||| |||||||||||||||    
T  29695673 gccctgtttggattggcttattttgagcttacgtgggcttatctactcccataatttttttttaaaggtgtttggataaataaataaaaat 29695763  T

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Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 600 - 689
Target Start/End: Complemental strand, 51359424 - 51359335
Alignment:
Q  600 ggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||| || |||||||||||||||| ||| |||| |||| ||||||| ||| ||||| || ||||||||||||| |||||||    
T  51359424 ggccccgtttggattggcttattttgagcttatgcgggcttatttactgccataagccttcttaaaggt-tttgggtaaataattaaaaat 51359335  T

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Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 541 - 599
Target Start/End: Complemental strand, 1848451 - 1848393
Alignment:
Q  541 tttagttctttgttggcccatttagaatttatcacgtgatgtcattaaagggagttcaa 599  Q
    |||||||| |||||||||||||||||||||||||| |||| |  |||||||||| ||||    
T  1848451 tttagttcattgttggcccatttagaatttatcacctgatatttttaaagggagctcaa 1848393  T

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Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 617 - 689
Target Start/End: Original strand, 15717800 - 15717872
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||| |||||| ||  |||||| |  |||||| ||||||||| ||||||| ||||||||||||||||    
T  15717800 ttattttgagtttatgttggcctatctaatttcataagcctttttaaaggtgtttgagtaaataaataaaaat 15717872  T

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Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 617 - 688
Target Start/End: Original strand, 38171847 - 38171918
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaa 688  Q
    |||||||||  |||||||   |||||||||| |||||  ||||||||| |||||||| ||||||||||||||    
T  38171847 ttattttgaatttatgtgaacttatctactcacataaacctttttaaaggtgtttggataaataaataaaaa 38171918  T

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Target: scaffold0012 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 599 - 689
Target Start/End: Original strand, 36701 - 36792
Alignment:
Q  599 aggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||||| || |||||||||||||||||||| |||||||||||||||||  |||||||| ||||||||||||||||||||||||    
T  36701 aggccccgtttggattggcttattttgagcttatgtgggcttatctactcccataagcatttttaaaggtgtttgggtaaataaataaaaat 36792  T

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Target: scaffold0920 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0920
Description:

Target: scaffold0920; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 601 - 689
Target Start/End: Original strand, 3708 - 3797
Alignment:
Q  601 gccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||||||||||| |||||||||||| |||||||||| |||||||||| |||||| ||||||||| ||||||||||||||||||||||||    
T  3708 gccccgtttggattggtttattttgaacttatgtgggcttatctactctcataagcctttttaaatgtgtttgggtaaataaataaaaat 3797  T

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Target: scaffold0482 (Bit Score: 61; Significance: 8e-26; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 602 - 689
Target Start/End: Complemental strand, 501 - 413
Alignment:
Q  602 ccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||| || |||||||||| ||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  501 ccccgtttggattggcttattttgagtttatgtgagtttatctactcccataagtctttttaaaggtgtttgggtaaataaataaaaat 413  T

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Target: scaffold0167 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 600 - 689
Target Start/End: Complemental strand, 23159 - 23069
Alignment:
Q  600 ggccccgtttggat-ggtttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||| || ||||||||||||||| |||| |||||||||| |||||| ||||||||| ||||||||||||||||||||||||    
T  23159 ggccccgtttggattggcttattttgagcttatatgggcttatctactctcataagcctttttaaaggtgtttgggtaaataaataaaaat 23069  T

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Target: scaffold0172 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 598 - 689
Target Start/End: Original strand, 10233 - 10325
Alignment:
Q  598 aaggccccgtttggatggt-ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||| |  ||||||||||||||| ||||||||||||||| |||||| ||| ||||| ||||||||||||||||||||||||    
T  10233 aaggccccgtttggattgacttattttgagcttatatgggtttatctactctcataagccttcttaaaggtgtttgggtaaataaataaaaat 10325  T

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Target: scaffold0018 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 617 - 689
Target Start/End: Complemental strand, 145435 - 145363
Alignment:
Q  617 ttattttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||| ||||||||  |||||||||||||||||  |||||||| ||||||||||||||||||||||||    
T  145435 ttattttgagtttatgtggacttatctactcccataagcttttttaaaggtgtttgggtaaataaataaaaat 145363  T

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Target: scaffold1777 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold1777
Description:

Target: scaffold1777; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 622 - 689
Target Start/End: Complemental strand, 191 - 124
Alignment:
Q  622 ttgagcttatgtgggtttatctactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    ||||| |||| |||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  191 ttgagtttatatgggcttatctactcccataagcctttttaaaggtgtttgggtaaataaataaaaat 124  T

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Target: scaffold0038 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 617 - 689
Target Start/End: Complemental strand, 197 - 123
Alignment:
Q  617 ttattttgagcttatgtgggtttatc---tactcccataagactttttaaaagtgtttgggtaaataaataaaaat 689  Q
    |||||||||||||||||||  |||||   |||||| ||||| ||||||||| ||||||||||||||||||||||||    
T  197 ttattttgagcttatgtggacttatcatctactcc-ataagcctttttaaaggtgtttgggtaaataaataaaaat 123  T

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Target: scaffold0257 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 534 - 599
Target Start/End: Complemental strand, 20705 - 20640
Alignment:
Q  534 ttaaaggtttagttctttgttggcccatttagaatttatcacgtgatgtcattaaagggagttcaa 599  Q
    ||||| |||||  |||||||||||| ||||||||||||||| ||| ||| | |||||||| |||||    
T  20705 ttaaaagtttatatctttgttggccaatttagaatttatcatgtggtgttactaaagggaattcaa 20640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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