View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11746_low_52 (Length: 255)

Name: NF11746_low_52
Description: NF11746
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11746_low_52
NF11746_low_52
[»] chr5 (28 HSPs)
chr5 (57-152)||(28588638-28588733)
chr5 (94-158)||(6471890-6471954)
chr5 (72-151)||(30502367-30502446)
chr5 (72-151)||(30542710-30542789)
chr5 (94-152)||(3966503-3966561)
chr5 (102-159)||(24273039-24273096)
chr5 (102-159)||(24389118-24389175)
chr5 (63-157)||(42893355-42893449)
chr5 (94-151)||(36838544-36838601)
chr5 (100-152)||(7175026-7175078)
chr5 (94-158)||(41091258-41091322)
chr5 (100-151)||(12264836-12264887)
chr5 (89-144)||(16203791-16203846)
chr5 (99-154)||(23015995-23016050)
chr5 (94-152)||(2436922-2436980)
chr5 (94-152)||(11685939-11685997)
chr5 (94-144)||(13287400-13287450)
chr5 (94-144)||(39205888-39205938)
chr5 (93-142)||(14873527-14873576)
chr5 (89-142)||(18421837-18421890)
chr5 (83-144)||(21191046-21191107)
chr5 (100-144)||(9449477-9449521)
chr5 (89-157)||(12927649-12927717)
chr5 (118-158)||(19746717-19746757)
chr5 (97-157)||(26609348-26609408)
chr5 (100-152)||(27144463-27144515)
chr5 (97-149)||(30098329-30098381)
chr5 (94-154)||(32630736-32630796)
[»] chr7 (35 HSPs)
chr7 (94-152)||(1433454-1433512)
chr7 (73-157)||(20549786-20549870)
chr7 (96-150)||(2425736-2425790)
chr7 (94-152)||(22602711-22602769)
chr7 (89-144)||(5835255-5835310)
chr7 (89-152)||(28155570-28155633)
chr7 (89-152)||(32287459-32287522)
chr7 (94-152)||(19206050-19206108)
chr7 (94-152)||(32308120-32308178)
chr7 (63-144)||(21880160-21880241)
chr7 (94-142)||(9482944-9482992)
chr7 (94-158)||(16341490-16341554)
chr7 (97-153)||(27732243-27732299)
chr7 (89-144)||(3721101-3721156)
chr7 (89-152)||(22484025-22484088)
chr7 (89-152)||(23191896-23191959)
chr7 (89-152)||(26733304-26733367)
chr7 (89-152)||(27093409-27093472)
chr7 (89-152)||(27184829-27184892)
chr7 (89-144)||(37870901-37870956)
chr7 (96-154)||(3520345-3520403)
chr7 (94-152)||(5548676-5548734)
chr7 (94-144)||(7328692-7328742)
chr7 (95-149)||(17851434-17851488)
chr7 (94-144)||(19992009-19992059)
chr7 (82-144)||(22868050-22868112)
chr7 (98-152)||(26329387-26329441)
chr7 (101-158)||(8160410-8160467)
chr7 (95-144)||(15902830-15902879)
chr7 (111-152)||(29787387-29787428)
chr7 (84-153)||(42720881-42720950)
chr7 (91-131)||(640134-640174)
chr7 (118-154)||(11700801-11700837)
chr7 (97-153)||(38134410-38134466)
chr7 (89-145)||(38143230-38143286)
[»] chr6 (33 HSPs)
chr6 (71-151)||(7265571-7265651)
chr6 (89-152)||(5732506-5732569)
chr6 (89-152)||(19040352-19040415)
chr6 (34-152)||(7377979-7378096)
chr6 (94-144)||(9025495-9025545)
chr6 (94-152)||(9027178-9027236)
chr6 (105-158)||(5462680-5462733)
chr6 (84-141)||(13360363-13360420)
chr6 (31-103)||(5000554-5000625)
chr6 (94-149)||(9617437-9617492)
chr6 (89-152)||(9658879-9658942)
chr6 (93-144)||(11784216-11784267)
chr6 (89-151)||(31579223-31579283)
chr6 (94-152)||(9629383-9629441)
chr6 (95-144)||(7086803-7086852)
chr6 (98-151)||(30866149-30866202)
chr6 (100-152)||(17341671-17341723)
chr6 (94-154)||(32320670-32320730)
chr6 (94-154)||(32511667-32511727)
chr6 (89-152)||(13851736-13851799)
chr6 (93-144)||(19044472-19044523)
chr6 (89-144)||(21924931-21924986)
chr6 (94-144)||(7996379-7996429)
chr6 (94-144)||(8022372-8022422)
chr6 (94-144)||(9195755-9195805)
chr6 (94-152)||(20371111-20371169)
chr6 (94-140)||(26562701-26562747)
chr6 (94-144)||(34073348-34073398)
chr6 (99-140)||(11591876-11591917)
chr6 (94-159)||(14155240-14155305)
chr6 (89-158)||(28715289-28715358)
chr6 (64-144)||(16833316-16833396)
chr6 (94-138)||(17327656-17327700)
[»] chr2 (28 HSPs)
chr2 (94-158)||(44860314-44860378)
chr2 (74-144)||(5367200-5367270)
chr2 (91-152)||(18276521-18276582)
chr2 (96-157)||(23718021-23718082)
chr2 (96-157)||(24105693-24105754)
chr2 (95-151)||(39279676-39279732)
chr2 (101-152)||(21616762-21616813)
chr2 (89-151)||(31018591-31018653)
chr2 (94-152)||(37411245-37411303)
chr2 (89-149)||(34691801-34691861)
chr2 (89-149)||(34714213-34714273)
chr2 (89-144)||(5473336-5473391)
chr2 (83-134)||(20242717-20242768)
chr2 (65-152)||(30404822-30404909)
chr2 (97-144)||(30471046-30471093)
chr2 (100-151)||(35449514-35449565)
chr2 (94-157)||(42832277-42832340)
chr2 (94-151)||(2331795-2331850)
chr2 (94-144)||(18889592-18889642)
chr2 (94-152)||(24975326-24975384)
chr2 (106-144)||(25846749-25846787)
chr2 (94-152)||(28677909-28677966)
chr2 (97-151)||(30527599-30527653)
chr2 (93-139)||(38355887-38355933)
chr2 (63-144)||(2415325-2415406)
chr2 (63-151)||(18570973-18571061)
chr2 (111-151)||(22084850-22084890)
chr2 (111-151)||(28412351-28412391)
[»] chr1 (48 HSPs)
chr1 (89-152)||(2896117-2896180)
chr1 (95-157)||(1864882-1864944)
chr1 (89-151)||(9709821-9709883)
chr1 (71-141)||(43492472-43492542)
chr1 (94-158)||(34371708-34371771)
chr1 (89-152)||(36878461-36878524)
chr1 (83-158)||(40181865-40181940)
chr1 (95-144)||(10572591-10572640)
chr1 (63-152)||(21530689-21530778)
chr1 (94-158)||(29229455-29229520)
chr1 (89-161)||(5898262-5898334)
chr1 (94-142)||(44482240-44482288)
chr1 (89-152)||(2784556-2784619)
chr1 (94-157)||(38503315-38503378)
chr1 (63-158)||(40258903-40258998)
chr1 (94-144)||(7918212-7918262)
chr1 (95-157)||(17754306-17754368)
chr1 (94-152)||(20157351-20157409)
chr1 (89-151)||(28674801-28674863)
chr1 (94-151)||(6427351-6427408)
chr1 (95-152)||(13997883-13997940)
chr1 (99-152)||(17831537-17831590)
chr1 (63-144)||(22515857-22515938)
chr1 (94-154)||(1486710-1486770)
chr1 (84-140)||(23636040-23636096)
chr1 (94-142)||(25361896-25361944)
chr1 (89-149)||(52903252-52903312)
chr1 (89-144)||(14332638-14332693)
chr1 (105-144)||(15641042-15641081)
chr1 (101-152)||(25098563-25098614)
chr1 (94-153)||(25272481-25272540)
chr1 (89-152)||(39953142-39953205)
chr1 (96-151)||(42325561-42325616)
chr1 (94-144)||(9828052-9828102)
chr1 (95-144)||(10233261-10233310)
chr1 (71-152)||(19637768-19637849)
chr1 (99-156)||(24176373-24176430)
chr1 (95-152)||(26238115-26238171)
chr1 (89-134)||(30749858-30749903)
chr1 (89-134)||(30771309-30771354)
chr1 (100-152)||(398772-398824)
chr1 (101-157)||(17425101-17425157)
chr1 (83-143)||(18337338-18337398)
chr1 (102-142)||(19324572-19324612)
chr1 (92-144)||(19562620-19562672)
chr1 (72-148)||(22907318-22907394)
chr1 (89-144)||(25452146-25452199)
chr1 (93-149)||(27471566-27471622)
[»] chr3 (25 HSPs)
chr3 (89-159)||(7928443-7928513)
chr3 (72-152)||(25093502-25093582)
chr3 (79-142)||(8789536-8789599)
chr3 (83-158)||(11251972-11252045)
chr3 (101-157)||(16192758-16192814)
chr3 (100-152)||(32804547-32804599)
chr3 (80-158)||(3618875-3618951)
chr3 (89-152)||(8383257-8383320)
chr3 (89-144)||(20691327-20691382)
chr3 (94-152)||(26290371-26290429)
chr3 (94-159)||(7614416-7614481)
chr3 (94-151)||(8039836-8039893)
chr3 (89-158)||(51206349-51206418)
chr3 (64-144)||(45451561-45451641)
chr3 (89-149)||(49505150-49505210)
chr3 (88-151)||(4201397-4201460)
chr3 (89-152)||(8842330-8842392)
chr3 (97-152)||(10690266-10690321)
chr3 (93-152)||(13620764-13620823)
chr3 (99-154)||(34307786-34307841)
chr3 (101-159)||(11313808-11313866)
chr3 (94-144)||(18426957-18427007)
chr3 (71-152)||(40993313-40993395)
chr3 (94-158)||(1509533-1509597)
chr3 (99-147)||(11658820-11658868)
[»] scaffold0022 (1 HSPs)
scaffold0022 (63-151)||(90844-90932)
[»] scaffold0020 (1 HSPs)
scaffold0020 (94-157)||(135313-135376)
[»] chr8 (31 HSPs)
chr8 (89-152)||(34897085-34897148)
chr8 (94-152)||(4786339-4786397)
chr8 (95-157)||(11803254-11803316)
chr8 (94-152)||(11927087-11927145)
chr8 (183-235)||(4611449-4611501)
chr8 (89-144)||(12606825-12606880)
chr8 (89-144)||(13844592-13844647)
chr8 (93-144)||(14134707-14134758)
chr8 (89-152)||(31109514-31109577)
chr8 (94-152)||(11944665-11944723)
chr8 (90-144)||(20679392-20679446)
chr8 (96-157)||(4611529-4611590)
chr8 (94-159)||(25566834-25566899)
chr8 (63-152)||(31556997-31557085)
chr8 (89-146)||(33405380-33405437)
chr8 (100-152)||(24362209-24362261)
chr8 (94-154)||(24669431-24669491)
chr8 (96-144)||(31236580-31236628)
chr8 (96-152)||(39954282-39954338)
chr8 (89-144)||(3025559-3025614)
chr8 (93-152)||(28384994-28385053)
chr8 (93-144)||(29447110-29447161)
chr8 (93-151)||(33382019-33382077)
chr8 (95-144)||(7658471-7658520)
chr8 (101-158)||(14731706-14731763)
chr8 (57-152)||(26714050-26714143)
chr8 (89-142)||(38079009-38079062)
chr8 (99-152)||(41831946-41831999)
chr8 (113-153)||(18067954-18067994)
chr8 (94-134)||(26902176-26902216)
chr8 (95-143)||(40332200-40332248)
[»] chr4 (20 HSPs)
chr4 (93-152)||(5775358-5775417)
chr4 (102-152)||(22440609-22440659)
chr4 (34-157)||(23861371-23861495)
chr4 (93-142)||(18576037-18576086)
chr4 (83-143)||(9996849-9996909)
chr4 (103-150)||(903924-903971)
chr4 (89-152)||(8423714-8423777)
chr4 (93-151)||(6863154-6863212)
chr4 (94-144)||(15659761-15659811)
chr4 (98-152)||(40613450-40613504)
chr4 (93-152)||(11931280-11931339)
chr4 (96-151)||(16189710-16189765)
chr4 (89-144)||(33950144-33950199)
chr4 (101-144)||(36635332-36635375)
chr4 (89-144)||(54580019-54580074)
chr4 (94-144)||(4672086-4672136)
chr4 (105-151)||(30522927-30522973)
chr4 (94-154)||(21720508-21720568)
chr4 (72-144)||(28964227-28964299)
chr4 (94-150)||(30982879-30982935)
[»] scaffold0697 (1 HSPs)
scaffold0697 (63-152)||(1644-1733)
[»] scaffold0168 (1 HSPs)
scaffold0168 (97-154)||(21041-21098)
[»] scaffold0123 (1 HSPs)
scaffold0123 (97-154)||(44529-44586)
[»] scaffold1528 (1 HSPs)
scaffold1528 (95-157)||(1030-1092)
[»] scaffold0036 (1 HSPs)
scaffold0036 (94-144)||(9748-9798)
[»] scaffold0110 (1 HSPs)
scaffold0110 (95-152)||(28850-28907)
[»] scaffold0018 (1 HSPs)
scaffold0018 (111-152)||(192267-192308)
[»] scaffold0236 (1 HSPs)
scaffold0236 (94-153)||(25769-25828)
[»] scaffold0050 (1 HSPs)
scaffold0050 (89-152)||(70278-70341)
[»] scaffold0044 (1 HSPs)
scaffold0044 (96-143)||(53189-53236)
[»] scaffold0049 (1 HSPs)
scaffold0049 (89-151)||(63774-63836)


Alignment Details
Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 152
Target Start/End: Original strand, 28588638 - 28588733
Alignment:
Q  57 attaaacgtgtcttggtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    ||||| |||||| ||||||| ||| |||||  |||| ||||||||||| |||| |||||| |||| |||||||||||||||||||||| |||||||    
T  28588638 attaagcgtgtcctggtgtcagatatgtgtcgtgtccgacaccgacacctataattacactgaattatgtgattttctcaaattattaccggtgtc 28588733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 158
Target Start/End: Original strand, 6471890 - 6471954
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtc 158  Q
    |||||| ||||||||| |||||| |||| |||||||||||||||||||||| | |||||||||||    
T  6471890 gacacccacacatataattacactgaattatgtgattttctcaaattattagccgtgtcagtgtc 6471954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 72 - 151
Target Start/End: Original strand, 30502367 - 30502446
Alignment:
Q  72 gtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 151  Q
    ||||||||  |||||  |||| |||||||||||||||| |||||| |||| | |||||||||||||||||||| ||||||    
T  30502367 gtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattattagcggtgt 30502446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 72 - 151
Target Start/End: Original strand, 30542710 - 30542789
Alignment:
Q  72 gtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 151  Q
    ||||||||  |||||  |||| |||||||||||||||| |||||| |||| | |||||||||||||||||||| ||||||    
T  30542710 gtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattattagcggtgt 30542789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 3966561 - 3966503
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||||||||||||||| |||||| ||||  ||||||||||||||||||||| |||||||    
T  3966561 gacaccgacacatataattacactgaattgtgtgattttctcaaattattagcggtgtc 3966503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 24273039 - 24273096
Alignment:
Q  102 cacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtct 159  Q
    |||||||| |||||| |||| ||||||||||||||||||| |||| ||||||||||||    
T  24273039 cacatataattacactgaattatgtgattttctcaaattaataactgtgtcagtgtct 24273096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 159
Target Start/End: Complemental strand, 24389175 - 24389118
Alignment:
Q  102 cacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtct 159  Q
    |||||||| |||||| |||| ||||||||||||||||||| |||| ||||||||||||    
T  24389175 cacatataattacactgaattatgtgattttctcaaattaataactgtgtcagtgtct 24389118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 157
Target Start/End: Complemental strand, 42893449 - 42893355
Alignment:
Q  63 cgtgtcttggtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgt 157  Q
    |||||| ||||||||||   ||||| |||||||||||||||| | || |||||| | || |||||||||| ||||||||||| | ||||| ||||    
T  42893449 cgtgtcctggtgtcggacacgtgttgtgtctgacaccgacacttgtaattacactggattatgtgattttttcaaattattagctgtgtcggtgt 42893355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 151
Target Start/End: Complemental strand, 36838601 - 36838544
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 151  Q
    |||||||||||||||| ||||||  ||| |||| ||||||||||||||||| ||||||    
T  36838601 gacaccgacacatataattacactaaattatgtaattttctcaaattattagcggtgt 36838544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 7175026 - 7175078
Alignment:
Q  100 gacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||||||||| |||  || ||| ||||||||||||||||||||||||||||||    
T  7175026 gacacatataattatgccaaattatgtgattttctcaaattattaacggtgtc 7175078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 158
Target Start/End: Original strand, 41091258 - 41091322
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtc 158  Q
    |||| ||||||||||| |||||| |||| ||||||||||||||||| |||| | ||||| |||||    
T  41091258 gacatcgacacatataattacactgaattatgtgattttctcaaatcattagcagtgtccgtgtc 41091322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 100 - 151
Target Start/End: Original strand, 12264836 - 12264887
Alignment:
Q  100 gacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 151  Q
    |||||||||| |||||| ||||||||| |||||||||||| |||| ||||||    
T  12264836 gacacatataattacactgaatcatgtaattttctcaaataattagcggtgt 12264887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 144
Target Start/End: Original strand, 16203791 - 16203846
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    |||| |||||||||||||||| ||||||  ||| ||| ||||||||||||||||||    
T  16203791 tgtccgacaccgacacatataattacactaaattatgagattttctcaaattatta 16203846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 154
Target Start/End: Original strand, 23015995 - 23016050
Alignment:
Q  99 cgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcag 154  Q
    |||||| |||| |||||| |||| ||||||||||||||||| ||||||| ||||||    
T  23015995 cgacacctataattacactgaattatgtgattttctcaaatgattaacgatgtcag 23016050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 2436980 - 2436922
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||||||||||||||| | ||| ||||| ||||||||||  |||||||||| |||||||    
T  2436980 gacaccgacacatataatcacaacgaattatgtgatttttgcaaattattagcggtgtc 2436922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 11685997 - 11685939
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||||||||||||||| ||||||  ||| ||| || ||||||||||||||| |||||||    
T  11685997 gacaccgacacatataattacactaaattatgcgactttctcaaattattagcggtgtc 11685939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 13287400 - 13287450
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    ||||||||||| | ||||||||| |||| |||||||||| |||||||||||    
T  13287400 gacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 13287450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 39205938 - 39205888
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    |||||| ||||||||| ||||||| ||| || |||||||||||||||||||    
T  39205938 gacaccaacacatataattacacctaattatatgattttctcaaattatta 39205888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 142
Target Start/End: Complemental strand, 14873576 - 14873527
Alignment:
Q  93 tgacaccgacacatatagttacaccgaatcatgtgattttctcaaattat 142  Q
    ||||||||||||||||| ||||||  ||| ||||| ||||||||||||||    
T  14873576 tgacaccgacacatataattacactaaattatgtgcttttctcaaattat 14873527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 142
Target Start/End: Original strand, 18421837 - 18421890
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattat 142  Q
    |||| ||| |||||||||||| |||||| | || ||||||||||||||||||||    
T  18421837 tgtccgacgccgacacatataattacactggattatgtgattttctcaaattat 18421890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 144
Target Start/End: Original strand, 21191046 - 21191107
Alignment:
Q  83 gtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    ||||| |||| ||||||||||| | || |||||| |||| |||||||||| |||||||||||    
T  21191046 gtgttgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 21191107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 9449521 - 9449477
Alignment:
Q  100 gacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    |||||| |||||||||  |||| ||||||||||||||||||||||    
T  9449521 gacacaaatagttacattgaattatgtgattttctcaaattatta 9449477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 157
Target Start/End: Complemental strand, 12927717 - 12927649
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgt 157  Q
    |||||||||| |||| ||||| ||||||  ||| || ||||||||||||||||||| || |||| ||||    
T  12927717 tgtctgacactgacatatataattacactaaattatatgattttctcaaattattagcgatgtcggtgt 12927649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 19746717 - 19746757
Alignment:
Q  118 gaatcatgtgattttctcaaattattaacggtgtcagtgtc 158  Q
    |||| |||| ||||||||||||||||| |||||||||||||    
T  19746717 gaattatgtaattttctcaaattattagcggtgtcagtgtc 19746757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 157
Target Start/End: Complemental strand, 26609408 - 26609348
Alignment:
Q  97 accgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgt 157  Q
    ||||||||| |||||| |||  |||||||||||||| |||||||||||  |||||| ||||    
T  26609408 accgacacaaatagttgcactaaatcatgtgattttatcaaattattagtggtgtcggtgt 26609348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 152
Target Start/End: Complemental strand, 27144515 - 27144463
Alignment:
Q  100 gacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||||||||| ||||||  ||| ||||||||| |||||||||||| |||||||    
T  27144515 gacacatataattacactaaattatgtgatttcctcaaattattagcggtgtc 27144463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 149
Target Start/End: Complemental strand, 30098381 - 30098329
Alignment:
Q  97 accgacacatatagttacaccgaatcatgtgattttctcaaattattaacggt 149  Q
    |||||||  |||| |||||  |||| |||||||||||||||||||||||||||    
T  30098381 accgacatctataattacattgaattatgtgattttctcaaattattaacggt 30098329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 154
Target Start/End: Original strand, 32630736 - 32630796
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcag 154  Q
    ||||| |||||||||| |||||  |||| || | ||||||||||||||||| |||||||||    
T  32630736 gacactgacacatataattacattgaattatataattttctcaaattattatcggtgtcag 32630796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 6e-18; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 1433512 - 1433454
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||    
T  1433512 gacaccgacacatataattacaccaaatgatgtgattttctcaaattattaacggtgtc 1433454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 157
Target Start/End: Complemental strand, 20549870 - 20549786
Alignment:
Q  73 tgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgt 157  Q
    |||||||  |||||| |||| |||||||||||||||| |||||| |||| | |||||||||||||||||||| ||||||| ||||    
T  20549870 tgtcggacatgtgttgtgtccgacaccgacacatataattacactgaattacgtgattttctcaaattattagcggtgtcggtgt 20549786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 2425736 - 2425790
Alignment:
Q  96 caccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtg 150  Q
    ||||||||||||||||| |||  ||| ||||||||||||||||||||||||||||    
T  2425736 caccgacacatatagttccacttaattatgtgattttctcaaattattaacggtg 2425790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 22602711 - 22602769
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||||||||||||||| |||||| |||| ||||||||||||||||| ||| ||||||||    
T  22602711 gacaccgacacatataattacactgaattatgtgattttctcaaataatttacggtgtc 22602769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 5835310 - 5835255
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    ||||||||||||||||||||| |||||| |||| |||| ||||||||||| |||||    
T  5835310 tgtctgacaccgacacatataattacactgaattatgttattttctcaaactatta 5835255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 152
Target Start/End: Complemental strand, 28155633 - 28155570
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||| ||||||||||| | || ||||||||||| |||| ||||||||||||||||| |||||||    
T  28155633 tgtccgacaccgacacttgtaattacaccgaattatgtaattttctcaaattattagcggtgtc 28155570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 152
Target Start/End: Original strand, 32287459 - 32287522
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||| |||||||||||||||| || ||| |||| |||||||||||||| ||||||| |||||||    
T  32287459 tgtccgacaccgacacatatacttgcactgaattatgtgattttctcagattattagcggtgtc 32287522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 19206108 - 19206050
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||||||||||||||| ||| |  |||| |||||||||||||||||||||| |||||||    
T  19206108 gacaccgacacatataattataatgaattatgtgattttctcaaattattagcggtgtc 19206050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 32308178 - 32308120
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    ||||| |||||||| | |||||| |||| |||||||||||||||||||||| |||||||    
T  32308178 gacactgacacatacaattacactgaattatgtgattttctcaaattattagcggtgtc 32308120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 144
Target Start/End: Complemental strand, 21880241 - 21880160
Alignment:
Q  63 cgtgtcttggtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    |||||| ||||||||||  |||||  |||| ||||||||||| | || |||||| |||| |||| |||||||||||||||||    
T  21880241 cgtgtcctggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtaattttctcaaattatta 21880160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 9482992 - 9482944
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattat 142  Q
    |||||||||||||||| |||||| ||||  |||||||||||||||||||    
T  9482992 gacaccgacacatataattacactgaattgtgtgattttctcaaattat 9482944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 158
Target Start/End: Complemental strand, 16341554 - 16341490
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtc 158  Q
    ||||||| |||||||| ||||||  ||| |||||||||||||||||||||| | ||||| |||||    
T  16341554 gacaccggcacatataattacacttaattatgtgattttctcaaattattatcagtgtccgtgtc 16341490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 27732243 - 27732299
Alignment:
Q  97 accgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtca 153  Q
    ||||||||||||| |||||| |||| |||| ||||||| |||||||||||| |||||    
T  27732243 accgacacatataattacactgaattatgtaattttcttaaattattaacgttgtca 27732299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 3721156 - 3721101
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    |||| |||||||||||||||| ||| ||  ||| ||||||||||||||||||||||    
T  3721156 tgtccgacaccgacacatataattatactaaattatgtgattttctcaaattatta 3721101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 152
Target Start/End: Complemental strand, 22484088 - 22484025
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    ||||||||||||||||||||| ||| || |||| |||  ||||||| ||||||||| |||||||    
T  22484088 tgtctgacaccgacacatataattatactgaattatgcaattttctaaaattattagcggtgtc 22484025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 152
Target Start/End: Complemental strand, 23191959 - 23191896
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||||||||| || |||| || |||||| |||  |||||||||||||||||||||| |||||||    
T  23191959 tgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcggtgtc 23191896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 152
Target Start/End: Complemental strand, 26733367 - 26733304
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||| ||||||||||||| || ||| || |||| |||||||||| ||||||||||| |||||||    
T  26733367 tgtccgacaccgacacatttaattagactgaattatgtgattttgtcaaattattagcggtgtc 26733304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 152
Target Start/End: Original strand, 27093409 - 27093472
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    ||||| |||||||| |||||| ||||||  ||| |||||||||||| ||||||||| |||||||    
T  27093409 tgtctaacaccgacgcatataattacactaaattatgtgattttcttaaattattagcggtgtc 27093472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 152
Target Start/End: Complemental strand, 27184892 - 27184829
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    ||||| |||||||| |||||| ||||||  ||| |||||||||||| ||||||||| |||||||    
T  27184892 tgtctaacaccgacgcatataattacactaaattatgtgattttcttaaattattagcggtgtc 27184829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 37870956 - 37870901
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    |||| |||||||||||| ||| ||||||  ||||||||||||||||||||| ||||    
T  37870956 tgtccgacaccgacacacataattacacgaaatcatgtgattttctcaaatgatta 37870901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 154
Target Start/End: Original strand, 3520345 - 3520403
Alignment:
Q  96 caccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcag 154  Q
    |||||||||||||| |||||  |||| || |||||||||||||| |||| |||||||||    
T  3520345 caccgacacatataattacattgaattatatgattttctcaaatgattatcggtgtcag 3520403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 5548734 - 5548676
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    ||||| |||||||||| |||||| |||| || ||||||||||||||||| | |||||||    
T  5548734 gacactgacacatataattacactgaattatttgattttctcaaattatcagcggtgtc 5548676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 7328692 - 7328742
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    |||||||||||||||| ||||||  ||| |||| |||||||||||||||||    
T  7328692 gacaccgacacatataattacactaaattatgttattttctcaaattatta 7328742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 149
Target Start/End: Complemental strand, 17851488 - 17851434
Alignment:
Q  95 acaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggt 149  Q
    |||| |||||||||| |||||| |||| |||||||||||| ||||||||| ||||    
T  17851488 acacagacacatataattacactgaattatgtgattttctaaaattattagcggt 17851434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 19992059 - 19992009
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    ||||||||||| |||| |||||| |||  ||||||||||||||||||||||    
T  19992059 gacaccgacacttataattacactgaaatatgtgattttctcaaattatta 19992009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 144
Target Start/End: Complemental strand, 22868112 - 22868050
Alignment:
Q  82 tgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    |||||| ||| ||| || |||||||||| |||||| |||| |||||||||||||| |||||||    
T  22868112 tgtgttgtgtttgatactgacacatataattacactgaattatgtgattttctcatattatta 22868050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 152
Target Start/End: Original strand, 26329387 - 26329441
Alignment:
Q  98 ccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||||||||||| |||||| ||||  |||| ||||||||||||||||||| ||||    
T  26329387 ccgacacatataattacactgaattgtgtgtttttctcaaattattaacgatgtc 26329441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 101 - 158
Target Start/End: Complemental strand, 8160467 - 8160410
Alignment:
Q  101 acacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtc 158  Q
    ||||||||| ||||||  ||| |||| ||||||| ||||||||| |||||||||||||    
T  8160467 acacatataattacactaaattatgtaattttcttaaattattagcggtgtcagtgtc 8160410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 144
Target Start/End: Complemental strand, 15902879 - 15902830
Alignment:
Q  95 acaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    ||||||||||||||| ||||||  ||| |||||||||| |||||||||||    
T  15902879 acaccgacacatataattacactaaattatgtgattttatcaaattatta 15902830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 111 - 152
Target Start/End: Original strand, 29787387 - 29787428
Alignment:
Q  111 ttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||||| |||| |||||||||||||||||||||| |||||||    
T  29787387 ttacactgaattatgtgattttctcaaattattagcggtgtc 29787428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 153
Target Start/End: Original strand, 42720881 - 42720950
Alignment:
Q  84 tgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtca 153  Q
    |||| |||| ||||| |||||||||| |||||   ||| |||||||||| ||||||||||| ||||||||    
T  42720881 tgttgtgtcagacactgacacatataattacatttaattatgtgattttttcaaattattagcggtgtca 42720950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 131
Target Start/End: Complemental strand, 640174 - 640134
Alignment:
Q  91 tctgacaccgacacatatagttacaccgaatcatgtgattt 131  Q
    ||||||||||||||||||| |||||| |||| |||||||||    
T  640174 tctgacaccgacacatataattacactgaattatgtgattt 640134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 154
Target Start/End: Complemental strand, 11700837 - 11700801
Alignment:
Q  118 gaatcatgtgattttctcaaattattaacggtgtcag 154  Q
    |||| |||||||||| |||||||||||||||||||||    
T  11700837 gaattatgtgattttgtcaaattattaacggtgtcag 11700801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 38134410 - 38134466
Alignment:
Q  97 accgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtca 153  Q
    ||||||||||||  |||||  |||| |||| ||||||||||||||||| ||||||||    
T  38134410 accgacacatatgattacattgaattatgtcattttctcaaattattatcggtgtca 38134466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 38143286 - 38143230
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaa 145  Q
    ||||||||||| ||||||||| |||||   ||| |||||||||| ||||||||||||    
T  38143286 tgtctgacaccaacacatataattacattaaattatgtgattttttcaaattattaa 38143230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 71 - 151
Target Start/End: Original strand, 7265571 - 7265651
Alignment:
Q  71 ggtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 151  Q
    |||||||||  ||| || |||| |||||||||||||||| |||||| |||| |||||||||||||||||||||| ||||||    
T  7265571 ggtgtcggacatgtattgtgtccgacaccgacacatataattacactgaattatgtgattttctcaaattattagcggtgt 7265651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 89 - 152
Target Start/End: Original strand, 5732506 - 5732569
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||| |||||||||||||||| ||||||  ||  ||||||||||||||||||||||||||||||    
T  5732506 tgtccgacaccgacacatataattacactaaaatatgtgattttctcaaattattaacggtgtc 5732569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 89 - 152
Target Start/End: Complemental strand, 19040415 - 19040352
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||| ||||| |||||||||| |||||| |||| |||||||||||||||||||||| |||||||    
T  19040415 tgtccgacacagacacatataattacactgaattatgtgattttctcaaattattagcggtgtc 19040352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 152
Target Start/End: Complemental strand, 7378096 - 7377979
Alignment:
Q  34 atgaagcacgaacactctttcaaattaaacgtgtcttggtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttc 133  Q
    |||||||||| ||||| | ||| ||||  ||||||  |||||||||||  |||  |||| |||||||||||||||| |||||  |||| |||||||||||    
T  7378096 atgaagcacggacact-tctcagattagccgtgtcccggtgtcggatgcatgtcgtgtccgacaccgacacatataattacattgaattatgtgattttc 7377998  T
Q  134 tcaaattattaacggtgtc 152  Q
    ||||||| ||| |||||||    
T  7377997 tcaaatttttagcggtgtc 7377979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 9025495 - 9025545
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    |||||||||||||||| |||||| |||| ||||||||||||||||||||||    
T  9025495 gacaccgacacatataattacactgaattatgtgattttctcaaattatta 9025545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 9027236 - 9027178
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||||||||||||||| |||||| |||| |||||||| ||||||||||||| |||||||    
T  9027236 gacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtc 9027178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 158
Target Start/End: Complemental strand, 5462733 - 5462680
Alignment:
Q  105 atatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtc 158  Q
    ||||| |||||  |||| ||||||||||||||||||||||||||||||||||||    
T  5462733 atataattacaatgaattatgtgattttctcaaattattaacggtgtcagtgtc 5462680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 141
Target Start/End: Original strand, 13360363 - 13360420
Alignment:
Q  84 tgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaatta 141  Q
    |||| ||||||||||||| ||||||| |||||| |||| |||||||||||||||||||    
T  13360363 tgttgtgtctgacaccgaaacatataattacactgaattatgtgattttctcaaatta 13360420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 103
Target Start/End: Original strand, 5000554 - 5000625
Alignment:
Q  31 tcaatgaagcacgaacactctttcaaattaaacgtgtcttggtgtcggatgtgtgttctgtctgacaccgaca 103  Q
    |||||||||||||||||||||| |  |||| ||||||| ||||||||||| |||||  |||||||||||||||    
T  5000554 tcaatgaagcacgaacactctt-cggattagacgtgtcctggtgtcggatatgtgtcgtgtctgacaccgaca 5000625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 9617492 - 9617437
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggt 149  Q
    |||||||||||||||| |||||  |||| |||||||||||||||||||||| ||||    
T  9617492 gacaccgacacatataattacattgaattatgtgattttctcaaattattaccggt 9617437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 152
Target Start/End: Complemental strand, 9658942 - 9658879
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    ||||| ||||||||| ||||| |||||| |||| |||||||||||| ||||||||| |||||||    
T  9658942 tgtctaacaccgacaaatataattacactgaattatgtgattttcttaaattattagcggtgtc 9658879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 11784216 - 11784267
Alignment:
Q  93 tgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    ||||||||||| ||||| |||||| || ||||||||||||||||||||||||    
T  11784216 tgacaccgacatatataattacactgattcatgtgattttctcaaattatta 11784267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 31579223 - 31579283
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 151  Q
    |||| ||||||||||||||   |||||| |||| |||||||||||||||||||||||||||||    
T  31579223 tgtccgacaccgacacataa--ttacactgaattatgtgattttctcaaattattaacggtgt 31579283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 9629441 - 9629383
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||||||||||||||| |||||  |||| |||||||||||||||||||||  |||||||    
T  9629441 gacaccgacacatataattacattgaattatgtgattttctcaaattattggcggtgtc 9629383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 144
Target Start/End: Complemental strand, 7086852 - 7086803
Alignment:
Q  95 acaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    ||||||||||||||| ||||||  ||| ||||||||||||||||||||||    
T  7086852 acaccgacacatataattacactaaattatgtgattttctcaaattatta 7086803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 151
Target Start/End: Original strand, 30866149 - 30866202
Alignment:
Q  98 ccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 151  Q
    |||||||||||| |||||  |||| |||||||||||||||||||||| ||||||    
T  30866149 ccgacacatataattacattgaattatgtgattttctcaaattattagcggtgt 30866202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 17341671 - 17341723
Alignment:
Q  100 gacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    ||||| |||| |||||| |||| |||||||||| |||||||||||||||||||    
T  17341671 gacacttataattacactgaattatgtgattttatcaaattattaacggtgtc 17341723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 154
Target Start/End: Original strand, 32320670 - 32320730
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcag 154  Q
    |||||||| ||||||| | |||  |||| |||||||||| |||||||||||||||||||||    
T  32320670 gacaccgatacatataatgacattgaattatgtgattttatcaaattattaacggtgtcag 32320730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 154
Target Start/End: Original strand, 32511667 - 32511727
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcag 154  Q
    |||||| |||| |||| |||||| |||| |||||||||||| ||||||||| |||||||||    
T  32511667 gacaccaacacttataattacactgaattatgtgattttcttaaattattagcggtgtcag 32511727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 152
Target Start/End: Complemental strand, 13851799 - 13851736
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||| |||| ||||||||||| |||||| |||| | || ||||||||||||||||| |||||||    
T  13851799 tgtcagacatcgacacatataattacactgaattacgttattttctcaaattattagcggtgtc 13851736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 19044523 - 19044472
Alignment:
Q  93 tgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    ||||||||||||||||| | |||| |||| ||||||| ||||||||||||||    
T  19044523 tgacaccgacacatataataacactgaattatgtgatattctcaaattatta 19044472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 144
Target Start/End: Original strand, 21924931 - 21924986
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    |||| |||||||||||||||| |||||| |||| || |||| ||||||||||||||    
T  21924931 tgtccgacaccgacacatataattacactgaattatttgatattctcaaattatta 21924986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 7996379 - 7996429
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    ||||||||| |||||| |||||| |||| || |||||||||||||||||||    
T  7996379 gacaccgacgcatataattacactgaattatatgattttctcaaattatta 7996429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 8022422 - 8022372
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    ||||||||| |||||| |||||| |||| || |||||||||||||||||||    
T  8022422 gacaccgacgcatataattacactgaattatatgattttctcaaattatta 8022372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 9195755 - 9195805
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    |||||||||||||||| ||||||  ||| |||| |||||||||||||||||    
T  9195755 gacaccgacacatataattacactaaattatgtcattttctcaaattatta 9195805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 20371111 - 20371169
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||||||||||||||| | |||  || | |||||||||||||||||||||| |||||||    
T  20371111 gacaccgacacatataatcacattgagttatgtgattttctcaaattattagcggtgtc 20371169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 140
Target Start/End: Complemental strand, 26562747 - 26562701
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaatt 140  Q
    |||| ||||||||||| |||||| |||| ||||||||||||||||||    
T  26562747 gacatcgacacatataattacactgaattatgtgattttctcaaatt 26562701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 34073348 - 34073398
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    ||||||||| |||||| |||||| |||| ||| ||||||||||||||||||    
T  34073348 gacaccgacccatataattacactgaattatgagattttctcaaattatta 34073398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 99 - 140
Target Start/End: Original strand, 11591876 - 11591917
Alignment:
Q  99 cgacacatatagttacaccgaatcatgtgattttctcaaatt 140  Q
    ||||||||||| |||||| |||| ||||||||||||||||||    
T  11591876 cgacacatataattacactgaattatgtgattttctcaaatt 11591917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 159
Target Start/End: Original strand, 14155240 - 14155305
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtct 159  Q
    |||||| |||||| || | |||| | || |||||||||||||||||||| | ||||||||||||||    
T  14155240 gacaccaacacatgtaatcacactgtattatgtgattttctcaaattatgatcggtgtcagtgtct 14155305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 28715358 - 28715289
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtc 158  Q
    |||| ||||||||||| | || |||||| |||| |||| ||||| ||||||||||| | |||||||||||    
T  28715358 tgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagccgtgtcagtgtc 28715289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 144
Target Start/End: Complemental strand, 16833396 - 16833316
Alignment:
Q  64 gtgtcttggtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    ||||| |||||||||| | ||||  ||||| |||||||||| | || |||||| |||  |||||||||| |||||||||||    
T  16833396 gtgtcctggtgtcggacgcgtgtcgtgtctaacaccgacacttgtaattacactgaagtatgtgattttttcaaattatta 16833316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 17327656 - 17327700
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaa 138  Q
    ||||| |||||||||||||||||  ||| ||||||||||||||||    
T  17327656 gacactgacacatatagttacactaaattatgtgattttctcaaa 17327700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 94 - 158
Target Start/End: Complemental strand, 44860378 - 44860314
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtc 158  Q
    |||||||||||||||| |||||| |||| ||| |||||||||||||||||| |||||||||||||    
T  44860378 gacaccgacacatataattacactgaattatgcgattttctcaaattattagcggtgtcagtgtc 44860314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 74 - 144
Target Start/End: Complemental strand, 5367270 - 5367200
Alignment:
Q  74 gtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    ||||||| |||||  |||| |||||||||||||||| |||||| |||| ||||||||| ||||||||||||    
T  5367270 gtcggatatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgatttcctcaaattatta 5367200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 152
Target Start/End: Complemental strand, 18276582 - 18276521
Alignment:
Q  91 tctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    ||||||||||||||| ||| |||||| |||| | |||||||||||||||||||| |||||||    
T  18276582 tctgacaccgacacacataattacactgaattaagtgattttctcaaattattagcggtgtc 18276521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 157
Target Start/End: Complemental strand, 23718082 - 23718021
Alignment:
Q  96 caccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgt 157  Q
    |||||||||||||| |||||| |||| |||||| ||||||||||||||| ||||||| ||||    
T  23718082 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgt 23718021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 157
Target Start/End: Complemental strand, 24105754 - 24105693
Alignment:
Q  96 caccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgt 157  Q
    |||||||||||||| |||||| |||| |||||| ||||||||||||||| ||||||| ||||    
T  24105754 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgt 24105693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 151
Target Start/End: Complemental strand, 39279732 - 39279676
Alignment:
Q  95 acaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 151  Q
    ||||||||||||||| |||||| |||| || ||||||||||| ||||||||||||||    
T  39279732 acaccgacacatataattacactgaattatttgattttctcatattattaacggtgt 39279676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 152
Target Start/End: Complemental strand, 21616813 - 21616762
Alignment:
Q  101 acacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    ||||||||| |||||| |||| |||||||||||||||||||||| |||||||    
T  21616813 acacatataattacactgaattatgtgattttctcaaattattagcggtgtc 21616762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 151
Target Start/End: Complemental strand, 31018653 - 31018591
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 151  Q
    |||| ||||||||||| |||| ||||||  |||||||||||||||| ||||||||| ||||||    
T  31018653 tgtccgacaccgacacctataattacactaaatcatgtgattttctgaaattattagcggtgt 31018591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 37411245 - 37411303
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||| ||||||||||| | |||| |||| |||||||||||||||||||||| |||||||    
T  37411245 gacatcgacacatataatcacactgaattatgtgattttctcaaattattagcggtgtc 37411303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 34691801 - 34691861
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggt 149  Q
    |||| |||||||||||||||| |||||| |||| || ||||||| ||||||||||| ||||    
T  34691801 tgtccgacaccgacacatataattacactgaattatatgattttatcaaattattagcggt 34691861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 34714213 - 34714273
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggt 149  Q
    |||| |||||||||||||||| |||||| |||| || ||||||| ||||||||||| ||||    
T  34714213 tgtccgacaccgacacatataattacactgaattatatgattttatcaaattattagcggt 34714273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 5473391 - 5473336
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    |||| ||||||||||||||   ||||||||||| |||||||||| |||||||||||    
T  5473391 tgtccgacaccgacacataatattacaccgaattatgtgattttttcaaattatta 5473336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 134
Target Start/End: Original strand, 20242717 - 20242768
Alignment:
Q  83 gtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttct 134  Q
    ||||| |||| |||||||||||||||| |||||| |||| ||||||||||||    
T  20242717 gtgttgtgtccgacaccgacacatataattacactgaattatgtgattttct 20242768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 152
Target Start/End: Original strand, 30404822 - 30404909
Alignment:
Q  65 tgtcttggtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||| ||||||||||  |||||  |||| ||| ||||||| | || |||||| |||| |||||||||| ||||||||||||| |||||    
T  30404822 tgtcctggtgtcggacatgtgtcgtgtccgacgccgacacttgtaattacactgaattatgtgattttttcaaattattaaccgtgtc 30404909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 144
Target Start/End: Complemental strand, 30471093 - 30471046
Alignment:
Q  97 accgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    ||||||||||||| ||||| ||||| |||||||||||||||| |||||    
T  30471093 accgacacatataattacatcgaattatgtgattttctcaaaatatta 30471046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 100 - 151
Target Start/End: Complemental strand, 35449565 - 35449514
Alignment:
Q  100 gacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 151  Q
    |||||||||| |||||| ||||  ||||||||||||||||||||||| ||||    
T  35449565 gacacatataattacactgaattctgtgattttctcaaattattaacagtgt 35449514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 94 - 157
Target Start/End: Original strand, 42832277 - 42832340
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgt 157  Q
    ||||||||||| |||| |||||| |||  |||| ||||||||||||||||| ||||||| ||||    
T  42832277 gacaccgacacttataattacactgaaatatgtaattttctcaaattattagcggtgtcggtgt 42832340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 151
Target Start/End: Complemental strand, 2331850 - 2331795
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 151  Q
    |||||||||||||| |  ||||| |||| ||||||||||||||||||||||| |||||    
T  2331850 gacaccgacacataaa--tacactgaattatgtgattttctcaaattattaatggtgt 2331795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 18889592 - 18889642
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    |||||||||||||||  |||||| |||| ||||||||||||||| ||||||    
T  18889592 gacaccgacacatatgattacactgaattatgtgattttctcaatttatta 18889642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 24975326 - 24975384
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    ||||||||| |||||| |||||| |||| ||  |||||||||||||||||| |||||||    
T  24975326 gacaccgacgcatatatttacactgaattatacgattttctcaaattattagcggtgtc 24975384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 144
Target Start/End: Complemental strand, 25846787 - 25846749
Alignment:
Q  106 tatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    |||| |||||| |||||||||||||||||||||||||||    
T  25846787 tataattacactgaatcatgtgattttctcaaattatta 25846749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 28677966 - 28677909
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||||||| ||||||| |||||| |||| |||||||||| ||||||||||| |||||||    
T  28677966 gacaccga-acatataattacactgaattatgtgattttttcaaattattagcggtgtc 28677909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 151
Target Start/End: Original strand, 30527599 - 30527653
Alignment:
Q  97 accgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 151  Q
    ||||||||||||| ||||||  ||| || ||||||||||||||||||||| ||||    
T  30527599 accgacacatataattacactaaattatatgattttctcaaattattaacagtgt 30527653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 139
Target Start/End: Original strand, 38355887 - 38355933
Alignment:
Q  93 tgacaccgacacatatagttacaccgaatcatgtgattttctcaaat 139  Q
    ||||||||||||||||| | |||| |||| |||||||||||||||||    
T  38355887 tgacaccgacacatataatcacactgaattatgtgattttctcaaat 38355933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 144
Target Start/End: Complemental strand, 2415406 - 2415325
Alignment:
Q  63 cgtgtcttggtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    ||||||| |||||||||  || ||  ||||| ||||| ||||||||||||||||  ||| || | |||||||||||||||||    
T  2415406 cgtgtctcggtgtcggacatgagtcgtgtctcacaccaacacatatagttacacttaattatataattttctcaaattatta 2415325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 151
Target Start/End: Complemental strand, 18571061 - 18570973
Alignment:
Q  63 cgtgtcttggtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 151  Q
    |||||| ||||||||||| ||| |  |||  ||||| |||||||||  |||||  |||| |||| ||||||||||||||||| ||||||    
T  18571061 cgtgtcctggtgtcggatatgtatcgtgttcgacactgacacatatgattacattgaattatgtcattttctcaaattattatcggtgt 18570973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 151
Target Start/End: Original strand, 22084850 - 22084890
Alignment:
Q  111 ttacaccgaatcatgtgattttctcaaattattaacggtgt 151  Q
    |||||| |||| || ||||||||||||||||||||||||||    
T  22084850 ttacactgaattatatgattttctcaaattattaacggtgt 22084890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 151
Target Start/End: Complemental strand, 28412391 - 28412351
Alignment:
Q  111 ttacaccgaatcatgtgattttctcaaattattaacggtgt 151  Q
    |||||| |||| |||||||||| ||||||||||||||||||    
T  28412391 ttacactgaattatgtgattttatcaaattattaacggtgt 28412351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 4e-16; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 89 - 152
Target Start/End: Original strand, 2896117 - 2896180
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    ||||||||||||||| |||||| ||||| |||| |||||||||||||||||||||| |||||||    
T  2896117 tgtctgacaccgacatatatagctacactgaattatgtgattttctcaaattattagcggtgtc 2896180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 1864882 - 1864944
Alignment:
Q  95 acaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgt 157  Q
    ||||||||||||||| |||||| |||| |||||||||||||||||||||||| ||||| ||||    
T  1864882 acaccgacacatataattacactgaattatgtgattttctcaaattattaactgtgtcggtgt 1864944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 151
Target Start/End: Complemental strand, 9709883 - 9709821
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 151  Q
    |||| |||||||||||||||| ||||| ||||| |||||||||||||||||||||| ||||||    
T  9709883 tgtccgacaccgacacatataattacaacgaattatgtgattttctcaaattattagcggtgt 9709821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 71 - 141
Target Start/End: Original strand, 43492472 - 43492542
Alignment:
Q  71 ggtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaatta 141  Q
    |||||||||  |||||| ||||||||||||||||| ||| ||||||||||| | |||||||||||||||||    
T  43492472 ggtgtcggacatgtgttgtgtctgacaccgacacacataattacaccgaattacgtgattttctcaaatta 43492542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 158
Target Start/End: Complemental strand, 34371771 - 34371708
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtc 158  Q
    |||||||||||||||| |||||| |||| ||||||||||||| |||||||| |||||||||||||    
T  34371771 gacaccgacacatataattacactgaattatgtgattttctc-aattattagcggtgtcagtgtc 34371708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 89 - 152
Target Start/End: Complemental strand, 36878524 - 36878461
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||| ||||||||||| |||| |||||| |||| |||||||||||||||||||||| |||||||    
T  36878524 tgtcagacaccgacacctataattacactgaattatgtgattttctcaaattattagcggtgtc 36878461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 158
Target Start/End: Complemental strand, 40181940 - 40181865
Alignment:
Q  83 gtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtc 158  Q
    ||||| |||| |||||||| ||||||| |||||| |||| |||||||||||||||||||||| | ||||| |||||    
T  40181940 gtgttgtgtccgacaccgatacatataattacactgaattatgtgattttctcaaattattagcagtgtctgtgtc 40181865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 144
Target Start/End: Original strand, 10572591 - 10572640
Alignment:
Q  95 acaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    |||||||||||| || ||||||||||| ||||||||||||||||||||||    
T  10572591 acaccgacacatttaattacaccgaattatgtgattttctcaaattatta 10572640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 21530778 - 21530689
Alignment:
Q  63 cgtgtcttggtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||||| | ||||||||  |||||  |||| ||||||||||| |||| ||| ||| ||| || |||||||||||||||||||||||||||    
T  21530778 cgtgtcctagtgtcggacatgtgtcgtgtccgacaccgacacttataattataccaaattatatgattttctcaaattattaacggtgtc 21530689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 158
Target Start/End: Complemental strand, 29229520 - 29229455
Alignment:
Q  94 gacaccgacacatatagttac-accgaatcatgtgattttctcaaattattaacggtgtcagtgtc 158  Q
    |||||||||||||||| |||| ||  |||||||||||||||||||||||||| | |||||||||||    
T  29229520 gacaccgacacatataattaccactaaatcatgtgattttctcaaattattagcagtgtcagtgtc 29229455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 5898262 - 5898334
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtctca 161  Q
    |||||||||||||| |||||| |||||| |||| |||||||||| ||| ||||||| ||||||| | ||||||    
T  5898262 tgtctgacaccgacgcatataattacactgaattatgtgattttttcagattattagcggtgtcggcgtctca 5898334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 44482288 - 44482240
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattat 142  Q
    |||||||||||||||| |||||| |||| ||||||||||||||||||||    
T  44482288 gacaccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 152
Target Start/End: Complemental strand, 2784619 - 2784556
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    ||||||||||||||||||||| ||| ||  ||| |||||||||||| ||||| |||||||||||    
T  2784619 tgtctgacaccgacacatataattatactcaattatgtgattttcttaaatttttaacggtgtc 2784556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 157
Target Start/End: Complemental strand, 38503378 - 38503315
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgt 157  Q
    |||||||||||||||| |||||| |||  || ||||||||||||||||||| ||||||| ||||    
T  38503378 gacaccgacacatataattacactgaaatatatgattttctcaaattattagcggtgtcggtgt 38503315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 158
Target Start/End: Original strand, 40258903 - 40258998
Alignment:
Q  63 cgtgtcttggtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtc 158  Q
    |||||| ||||||||||   ||||  |||||||||||||||| | || |||||| |||| |||||||||| ||||||||||||  ||||| |||||    
T  40258903 cgtgtcctggtgtcggacaggtgtcgtgtctgacaccgacacttgtaattacactgaattatgtgattttttcaaattattaattgtgtcggtgtc 40258998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 7918212 - 7918262
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    ||||| |||||||||| |||||| |||| ||||||||||||||||||||||    
T  7918212 gacactgacacatataattacactgaattatgtgattttctcaaattatta 7918262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 157
Target Start/End: Complemental strand, 17754368 - 17754306
Alignment:
Q  95 acaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgt 157  Q
    |||| ||||||||||||||||| |||| |||| ||||| ||||||||||| ||||||| ||||    
T  17754368 acactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgtcggtgt 17754306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 20157351 - 20157409
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||||||||||||||  |||||| |||| |||||||||||||| ||||||| |||||||    
T  20157351 gacaccgacacatatgattacactgaattatgtgattttctcacattattagcggtgtc 20157409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 151
Target Start/End: Complemental strand, 28674863 - 28674801
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 151  Q
    ||||||||||| ||| ||||| ||| || |||| |||| ||||||||||||||||||||||||    
T  28674863 tgtctgacaccaacatatataattatactgaattatgtaattttctcaaattattaacggtgt 28674801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 151
Target Start/End: Complemental strand, 6427408 - 6427351
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 151  Q
    |||||| ||||||||| |||||  |||| |||||||||||||||||||||| ||||||    
T  6427408 gacaccaacacatataattacattgaattatgtgattttctcaaattattagcggtgt 6427351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 152
Target Start/End: Complemental strand, 13997940 - 13997883
Alignment:
Q  95 acaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    ||||||||||||||| |||||| |||| |||||||||| | |||| ||||||||||||    
T  13997940 acaccgacacatataattacactgaattatgtgatttttttaaataattaacggtgtc 13997883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 17831537 - 17831590
Alignment:
Q  99 cgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    ||||||||||  |||||| |||| |||||||||||||||||||||| |||||||    
T  17831537 cgacacatatgattacactgaataatgtgattttctcaaattattagcggtgtc 17831590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 144
Target Start/End: Original strand, 22515857 - 22515938
Alignment:
Q  63 cgtgtcttggtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    ||||||| |||||||||| |||||  |||| ||||||||||| | || ||||||  ||| |||||||||| |||||||||||    
T  22515857 cgtgtctcggtgtcggatatgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 22515938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 154
Target Start/End: Original strand, 1486710 - 1486770
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcag 154  Q
    ||||||||||| |||| |||||| |||| |||||||||| ||||||||||| | |||||||    
T  1486710 gacaccgacacttataattacactgaattatgtgattttttcaaattattagctgtgtcag 1486770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 140
Target Start/End: Original strand, 23636040 - 23636096
Alignment:
Q  84 tgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaatt 140  Q
    |||| ||||||||||||||||||| | |||||| |||| |||| |||||||||||||    
T  23636040 tgttgtgtctgacaccgacacatacaattacactgaattatgtaattttctcaaatt 23636096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 25361944 - 25361896
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattat 142  Q
    ||||| |||||||||| |||||| |||| ||||||||||||||||||||    
T  25361944 gacactgacacatataattacactgaattatgtgattttctcaaattat 25361896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 149
Target Start/End: Complemental strand, 52903312 - 52903252
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggt 149  Q
    |||| |||||||||||||||| |||||| |||| || ||||||| | ||||||||||||||    
T  52903312 tgtccgacaccgacacatataattacactgaattatatgattttattaaattattaacggt 52903252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 144
Target Start/End: Original strand, 14332638 - 14332693
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    |||| |||||||| ||||||| ||||||  ||| ||||||||||||||||||||||    
T  14332638 tgtccgacaccgagacatataattacactaaattatgtgattttctcaaattatta 14332693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 144
Target Start/End: Original strand, 15641042 - 15641081
Alignment:
Q  105 atatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    |||||||||||| ||||||||||||||||| |||||||||    
T  15641042 atatagttacactgaatcatgtgattttcttaaattatta 15641081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 152
Target Start/End: Original strand, 25098563 - 25098614
Alignment:
Q  101 acacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    ||||||||| |||||| |||| |||||||||||||||||||| | |||||||    
T  25098563 acacatataattacactgaattatgtgattttctcaaattatcagcggtgtc 25098614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 25272540 - 25272481
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtca 153  Q
    ||||||||||| |||| ||||||  ||| |||||||||||||||||| ||||| ||||||    
T  25272540 gacaccgacacttataattacactaaattatgtgattttctcaaattgttaactgtgtca 25272481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 152
Target Start/End: Original strand, 39953142 - 39953205
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||| |||||||||||||| | ||||||  ||| |||||||||||| ||||||||| |||||||    
T  39953142 tgtccgacaccgacacatacaattacactaaattatgtgattttctaaaattattagcggtgtc 39953205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 151
Target Start/End: Complemental strand, 42325616 - 42325561
Alignment:
Q  96 caccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 151  Q
    |||| |||||||| ||||||| |||| |||| ||||||||||||||||| ||||||    
T  42325616 caccaacacatattgttacactgaattatgtcattttctcaaattattatcggtgt 42325561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 9828102 - 9828052
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    |||||||||||||| | |||||| |||| |||||||||| |||||||||||    
T  9828102 gacaccgacacataaaattacactgaattatgtgattttatcaaattatta 9828052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 144
Target Start/End: Complemental strand, 10233310 - 10233261
Alignment:
Q  95 acaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    |||| |||||||||| |||||| |||| ||||||||||||||| ||||||    
T  10233310 acacagacacatataattacactgaattatgtgattttctcaatttatta 10233261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 19637849 - 19637768
Alignment:
Q  71 ggtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||||||||| ||| |  |||| |||||||||||||||  |||||  |||| |||| ||||||| ||||||||| |||||||    
T  19637849 ggtgtcggatatgtatcgtgtccgacaccgacacatatgattacattgaataatgtcattttcttaaattattatcggtgtc 19637768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 24176373 - 24176430
Alignment:
Q  99 cgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtg 156  Q
    |||||| |||| |||||| |||| |||| ||||||||||||||||| |||||| ||||    
T  24176373 cgacacctataattacactgaatgatgttattttctcaaattattatcggtgttagtg 24176430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 152
Target Start/End: Original strand, 26238115 - 26238171
Alignment:
Q  95 acaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||| |||||||||| |||||| |||| |||| ||||||||||||||||| |||||||    
T  26238115 acactgacacatata-ttacactgaattatgttattttctcaaattattagcggtgtc 26238171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 30749903 - 30749858
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttct 134  Q
    |||| |||||||||||||||| |||||| |||| ||||||||||||    
T  30749903 tgtccgacaccgacacatataattacactgaattatgtgattttct 30749858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 30771354 - 30771309
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttct 134  Q
    |||| |||||||||||||||| |||||| |||| ||||||||||||    
T  30771354 tgtccgacaccgacacatataattacactgaattatgtgattttct 30771309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 398772 - 398824
Alignment:
Q  100 gacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    ||||| |||| |||||| |||| |||||||||| ||||||||||| |||||||    
T  398772 gacacctataattacactgaattatgtgattttttcaaattattagcggtgtc 398824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 157
Target Start/End: Original strand, 17425101 - 17425157
Alignment:
Q  101 acacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgt 157  Q
    ||||||||| |||||  |||| |||||||||| ||||||||||| ||||||| ||||    
T  17425101 acacatataattacattgaattatgtgattttatcaaattattatcggtgtccgtgt 17425157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 143
Target Start/End: Complemental strand, 18337398 - 18337338
Alignment:
Q  83 gtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatt 143  Q
    ||||| |||| ||||||||||| | || |||||| |||| |||||||||| ||||||||||    
T  18337398 gtgttgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 18337338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 19324612 - 19324572
Alignment:
Q  102 cacatatagttacaccgaatcatgtgattttctcaaattat 142  Q
    |||||||| |||||| |||| ||||||||||||||||||||    
T  19324612 cacatataattacactgaattatgtgattttctcaaattat 19324572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 144
Target Start/End: Original strand, 19562620 - 19562672
Alignment:
Q  92 ctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    |||||||| ||||||||| |||||| |||  ||| ||||||||||||||||||    
T  19562620 ctgacacctacacatataattacactgaactatgagattttctcaaattatta 19562672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 148
Target Start/End: Original strand, 22907318 - 22907394
Alignment:
Q  72 gtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacgg 148  Q
    ||||||||  |||||| ||||  |||||||||| |||| ||| ||| ||| || | |||||||||||||||||||||    
T  22907318 gtgtcggacatgtgttgtgtcccacaccgacacttataattataccaaattatataattttctcaaattattaacgg 22907394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 144
Target Start/End: Original strand, 25452146 - 25452199
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    |||||||||||||||||||   |||||| |||| ||| ||||||||||||||||||    
T  25452146 tgtctgacaccgacacataa--ttacactgaattatgagattttctcaaattatta 25452199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 27471566 - 27471622
Alignment:
Q  93 tgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggt 149  Q
    ||||||| |||||| || |||||| |||| ||||| |||||||||||||||| ||||    
T  27471566 tgacaccaacacatgtaattacactgaattatgtgcttttctcaaattattagcggt 27471622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 159
Target Start/End: Complemental strand, 7928513 - 7928443
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtct 159  Q
    |||| |||||||||||||||| |||||| |||| |||||||||| ||||||||||| ||||||| ||||||    
T  7928513 tgtccgacaccgacacatataattacactgaattatgtgattttttcaaattattagcggtgtcggtgtct 7928443  T

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Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 152
Target Start/End: Complemental strand, 25093582 - 25093502
Alignment:
Q  72 gtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    ||||||||  |||||| |||| |||||||||||||||| |||||| ||||  |||||||||||||||| |||||| |||||    
T  25093582 gtgtcggacatgtgttgtgtccgacaccgacacatataattacactgaattgtgtgattttctcaaatcattaacagtgtc 25093502  T

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Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 79 - 142
Target Start/End: Original strand, 8789536 - 8789599
Alignment:
Q  79 atgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattat 142  Q
    ||||||||  |||| |||||||||||||||| |||||| |||| ||||||||||||||||||||    
T  8789536 atgtgtgtcgtgtccgacaccgacacatataattacacggaattatgtgattttctcaaattat 8789599  T

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Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 83 - 158
Target Start/End: Complemental strand, 11252045 - 11251972
Alignment:
Q  83 gtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtc 158  Q
    ||||| |||||||||||||||||||   |||||| |||| |||||||||||||||||||||| |  ||||||||||    
T  11252045 gtgttgtgtctgacaccgacacataa--ttacactgaattatgtgattttctcaaattattagcaatgtcagtgtc 11251972  T

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Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 157
Target Start/End: Original strand, 16192758 - 16192814
Alignment:
Q  101 acacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgt 157  Q
    ||||||||| |||||| |||| |||| ||||||||||||||||||||||||| ||||    
T  16192758 acacatataattacactgaattatgttattttctcaaattattaacggtgtcggtgt 16192814  T

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Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 32804547 - 32804599
Alignment:
Q  100 gacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||||||||| ||||||  ||| ||||||||||||||||||||||||||||||    
T  32804547 gacacatataattacactaaattatgtgattttctcaaattattaacggtgtc 32804599  T

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Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 158
Target Start/End: Complemental strand, 3618951 - 3618875
Alignment:
Q  80 tgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtc 158  Q
    |||||||| |||||||||||||||||||   |||| | |||| |||  ||||||||||||||||| |||||||||||||    
T  3618951 tgtgtgttgtgtctgacaccgacacataa--ttacgctgaattatggaattttctcaaattattagcggtgtcagtgtc 3618875  T

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Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 152
Target Start/End: Complemental strand, 8383320 - 8383257
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||| ||||||||||| |||| |||||| |||| || ||||||||||||||||||| |||||||    
T  8383320 tgtccgacaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtc 8383257  T

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Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 20691382 - 20691327
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    ||||||||||||||||||||  |||||| |||| |||| |||||||||||||||||    
T  20691382 tgtctgacaccgacacatatgattacactgaattatgtcattttctcaaattatta 20691327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 26290429 - 26290371
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    ||||| |||||||||| ||| ||||||  ||||||||||||||||||||||| ||||||    
T  26290429 gacactgacacatataattaaaccgaactatgtgattttctcaaattattaatggtgtc 26290371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 159
Target Start/End: Original strand, 7614416 - 7614481
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtct 159  Q
    |||||||||| ||||| ||| || |||| |||||||||||| ||||||||||| ||||| ||||||    
T  7614416 gacaccgacatatataattatactgaattatgtgattttcttaaattattaactgtgtcggtgtct 7614481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 151
Target Start/End: Original strand, 8039836 - 8039893
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 151  Q
    |||||||||||||||| |||||| |||| || | ||||||||||||||||| ||||||    
T  8039836 gacaccgacacatataattacactgaattatataattttctcaaattattagcggtgt 8039893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 51206349 - 51206418
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtc 158  Q
    |||| ||||||||||| | || |||||| |||| |||||||||| ||||||||||| | |||||||||||    
T  51206349 tgtccgacaccgacacttgtatttacactgaattatgtgattttttcaaattattagctgtgtcagtgtc 51206418  T

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Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 144
Target Start/End: Complemental strand, 45451641 - 45451561
Alignment:
Q  64 gtgtcttggtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    |||||| |||||||||  |||||  |||| |||||||||||||||  ||| || |||  ||||||||||||||||||||||    
T  45451641 gtgtctcggtgtcggacatgtgtcgtgtccgacaccgacacatattattatactgaagtatgtgattttctcaaattatta 45451561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 49505150 - 49505210
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggt 149  Q
    |||| ||||| |||||||||| ||||||  ||| |||||||||||||||||||||| ||||    
T  49505150 tgtccgacactgacacatataattacactaaattatgtgattttctcaaattattagcggt 49505210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 151
Target Start/End: Complemental strand, 4201460 - 4201397
Alignment:
Q  88 ctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 151  Q
    ||||| |||||| ||| ||||| ||||||  ||| |||||||||| ||||||||||||||||||    
T  4201460 ctgtcggacaccaacatatataattacacttaattatgtgattttttcaaattattaacggtgt 4201397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 152
Target Start/End: Complemental strand, 8842392 - 8842330
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    ||||||||||||||| ||||| ||||||| ||| |||||||||||  ||||||||| |||||||    
T  8842392 tgtctgacaccgacatatataattacaccaaattatgtgattttc-aaaattattagcggtgtc 8842330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 152
Target Start/End: Original strand, 10690266 - 10690321
Alignment:
Q  97 accgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    ||||||| ||||| |||||| |||| |||||||||||||| ||||||| |||||||    
T  10690266 accgacaaatataattacactgaattatgtgattttctcagattattagcggtgtc 10690321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 152
Target Start/End: Original strand, 13620764 - 13620823
Alignment:
Q  93 tgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||||| ||||||||||  | ||| |||||||||||||||||||||||| || |||||||    
T  13620764 tgacacagacacatataactgcactgaatcatgtgattttctcaaattactagcggtgtc 13620823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 154
Target Start/End: Original strand, 34307786 - 34307841
Alignment:
Q  99 cgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcag 154  Q
    |||||| |||| |||||| |||  |||||||||||||||||||||| |||||||||    
T  34307786 cgacacttataattacactgaaatatgtgattttctcaaattattagcggtgtcag 34307841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 159
Target Start/End: Original strand, 11313808 - 11313866
Alignment:
Q  101 acacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtct 159  Q
    ||||||||| ||||||  ||| |||||||||||||||||||||| | ||||| ||||||    
T  11313808 acacatataattacactaaattatgtgattttctcaaattattagcagtgtcggtgtct 11313866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 18427007 - 18426957
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    |||||||||| ||||| ||||||||||| |||||||||| | |||||||||    
T  18427007 gacaccgacatatataattacaccgaattatgtgattttttgaaattatta 18426957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 40993313 - 40993395
Alignment:
Q  71 ggtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtga-ttttctcaaattattaacggtgtc 152  Q
    |||||||||  |||||  |||| |||||||||||||||| |||||| |||| |||||| |||| | ||||||||| |||||||    
T  40993313 ggtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgattttttttaaattattagcggtgtc 40993395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 158
Target Start/End: Complemental strand, 1509597 - 1509533
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtc 158  Q
    ||||||||||| | || ||||||  ||| |||||||||| ||||||||||| | |||||||||||    
T  1509597 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgtc 1509533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 147
Target Start/End: Complemental strand, 11658868 - 11658820
Alignment:
Q  99 cgacacatatagttacaccgaatcatgtgattttctcaaattattaacg 147  Q
    ||||||||||| | |||| |||| ||| |||||||||||||||||||||    
T  11658868 cgacacatataatcacactgaattatgcgattttctcaaattattaacg 11658820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 151
Target Start/End: Complemental strand, 90932 - 90844
Alignment:
Q  63 cgtgtcttggtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 151  Q
    ||||| |||||||||||   ||||| ||||||||| ||||| ||||| |||||| |||| || |||||||||||||||||||| |||||    
T  90932 cgtgttttggtgtcggacacgtgttgtgtctgacatcgacatatataattacactgaattatatgattttctcaaattattaatggtgt 90844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 94 - 157
Target Start/End: Original strand, 135313 - 135376
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgt 157  Q
    |||||||||||||||| |||||| |||| |||||||||||||||||||||| | ||||| ||||    
T  135313 gacaccgacacatataattacacagaattatgtgattttctcaaattattagcagtgtcggtgt 135376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 89 - 152
Target Start/End: Complemental strand, 34897148 - 34897085
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||| |||| ||||||||||| |||||| |||| |||||||||||||||||||||| |||||||    
T  34897148 tgtccgacatcgacacatataattacactgaattatgtgattttctcaaattattagcggtgtc 34897085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 4786339 - 4786397
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||||||||||||||| |||||| |||| |||||||||||| |||||||||| ||||||    
T  4786339 gacaccgacacatataattacactgaattatgtgattttcttaaattattaatggtgtc 4786397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 157
Target Start/End: Complemental strand, 11803316 - 11803254
Alignment:
Q  95 acaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgt 157  Q
    ||||| ||||||||| |||||| |||| |||||||||||| ||||||||||| ||||||||||    
T  11803316 acaccaacacatataattacactgaattatgtgattttcttaaattattaacagtgtcagtgt 11803254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 11927087 - 11927145
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||||||||||||||| |||||| |||| |||||||||| ||||||||||||| |||||    
T  11927087 gacaccgacacatataattacactgaattatgtgattttatcaaattattaacagtgtc 11927145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 4611501 - 4611449
Alignment:
Q  183 tctgtccgtattcgtgtttcatagacccaaaccaaacgttttggcttgctttg 235  Q
    |||||| |||| |||| |||| |||||||||||||||||||||||||||||||    
T  4611501 tctgtctgtatccgtgcttcaaagacccaaaccaaacgttttggcttgctttg 4611449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 144
Target Start/End: Original strand, 12606825 - 12606880
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    ||||||||||||||||||||| |||||  |||| || |||||||||||||||||||    
T  12606825 tgtctgacaccgacacatataattacattgaattatatgattttctcaaattatta 12606880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 144
Target Start/End: Original strand, 13844592 - 13844647
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    |||| |||||||||||||||| ||||||  ||| ||||||||||||||||||||||    
T  13844592 tgtccgacaccgacacatataattacactcaattatgtgattttctcaaattatta 13844647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 14134758 - 14134707
Alignment:
Q  93 tgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    ||||||||||| ||||| |||||| |||| ||||||||||||||||||||||    
T  14134758 tgacaccgacatatataattacactgaattatgtgattttctcaaattatta 14134707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 152
Target Start/End: Original strand, 31109514 - 31109577
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||| ||||| |||||||||||||| || ||||  | |||||||||||||||||||||||||||    
T  31109514 tgtccgacactgacacatatagttagactgaattgtttgattttctcaaattattaacggtgtc 31109577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 11944723 - 11944665
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||||||||||||||| |||||| || | |||||||||| ||||||||||||| |||||    
T  11944723 gacaccgacacatataattacactgagttatgtgattttatcaaattattaacagtgtc 11944665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 20679392 - 20679446
Alignment:
Q  90 gtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    ||||||||||||||| |||| |||||| |||  ||||||||||||||||||||||    
T  20679392 gtctgacaccgacacttataattacactgaactatgtgattttctcaaattatta 20679446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 96 - 157
Target Start/End: Complemental strand, 4611590 - 4611529
Alignment:
Q  96 caccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgt 157  Q
    |||||| ||||||| |||||| |||| |||| ||||||||||||||||| ||||||| ||||    
T  4611590 caccgagacatataattacactgaattatgttattttctcaaattattagcggtgtcggtgt 4611529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 159
Target Start/End: Complemental strand, 25566899 - 25566834
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtct 159  Q
    ||||||||||| | || |||||| |||| |||||||||| ||||||||||| | ||||||||||||    
T  25566899 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagtgtct 25566834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 31557085 - 31556997
Alignment:
Q  63 cgtgtcttggtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||||| ||||||||||  |||||  ||||||||||||| || | || |||||| |||| |||||||||| ||||||||||||| |||||    
T  31557085 cgtgtcctggtgtcggacatgtgtcgtgtctgacaccgaaacttgtaattacactgaattatgtgatttt-tcaaattattaactgtgtc 31556997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 146
Target Start/End: Original strand, 33405380 - 33405437
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaac 146  Q
    |||| |||||||||||||||| ||||||  ||| ||||| ||||||||||||||||||    
T  33405380 tgtccgacaccgacacatataattacactaaattatgtgtttttctcaaattattaac 33405437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 24362209 - 24362261
Alignment:
Q  100 gacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||||||||| |||||| |||| |||||||| ||||||||||||| |||||||    
T  24362209 gacacatataattacactgaattatgtgattctctcaaattattagcggtgtc 24362261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 154
Target Start/End: Complemental strand, 24669491 - 24669431
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcag 154  Q
    ||||||||||| | || |||||| |||| |||| |||| ||||||||||||||||||||||    
T  24669491 gacaccgacacttgtaattacactgaattatgtaatttcctcaaattattaacggtgtcag 24669431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 144
Target Start/End: Original strand, 31236580 - 31236628
Alignment:
Q  96 caccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    |||||||||||||| |||||  |||| ||||||||||||||||||||||    
T  31236580 caccgacacatataattacattgaattatgtgattttctcaaattatta 31236628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 152
Target Start/End: Original strand, 39954282 - 39954338
Alignment:
Q  96 caccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    ||||| |||||||| ||||||  ||| |||||||||||||||||||||| |||||||    
T  39954282 caccgtcacatataattacactaaattatgtgattttctcaaattattagcggtgtc 39954338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 3025614 - 3025559
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    |||| ||||| ||||| |||| |||||| |||| ||||||||||||||||||||||    
T  3025614 tgtccgacactgacacctataattacactgaattatgtgattttctcaaattatta 3025559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 152
Target Start/End: Original strand, 28384994 - 28385053
Alignment:
Q  93 tgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    ||||||||||||||||| |||||| |||| ||| |||||  ||| |||||||||||||||    
T  28384994 tgacaccgacacatataattacactgaattatgagatttattcatattattaacggtgtc 28385053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 29447110 - 29447161
Alignment:
Q  93 tgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    |||||||||||| | ||||||||  |||| ||||||||||||||||||||||    
T  29447110 tgacaccgacacttgtagttacattgaattatgtgattttctcaaattatta 29447161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 151
Target Start/End: Original strand, 33382019 - 33382077
Alignment:
Q  93 tgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 151  Q
    ||||||||||||||||| |||| | |||| |||| ||||||| ||||||||| ||||||    
T  33382019 tgacaccgacacatataattactctgaattatgtcattttcttaaattattatcggtgt 33382077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 144
Target Start/End: Complemental strand, 7658520 - 7658471
Alignment:
Q  95 acaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    ||||||||| ||||| |||||| |||| |||| |||||||||||||||||    
T  7658520 acaccgacaaatataattacactgaattatgtaattttctcaaattatta 7658471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 101 - 158
Target Start/End: Complemental strand, 14731763 - 14731706
Alignment:
Q  101 acacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgtc 158  Q
    ||||||||| ||||||  ||| |||||||||||||||||||||| | ||||| |||||    
T  14731763 acacatataattacactaaattatgtgattttctcaaattattagcagtgtctgtgtc 14731706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 152
Target Start/End: Original strand, 26714050 - 26714143
Alignment:
Q  57 attaaacgtgtcttggtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtga-ttttctcaaattattaacggtgtc 152  Q
    ||||||||||| || |||||| ||||||||  |||| |||||||||||  ||| ||||||||| | |||||| |||||||| ||||||| |||||||    
T  26714050 attaaacgtgttttagtgtcgtatgtgtgtcgtgtccgacaccgacac--ataattacaccgagt-atgtgatttttctcacattattagcggtgtc 26714143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 142
Target Start/End: Complemental strand, 38079062 - 38079009
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattat 142  Q
    |||| |||| |||| |||||| |||||| ||||||||||||||||| |||||||    
T  38079062 tgtccgacatcgacgcatataattacactgaatcatgtgattttcttaaattat 38079009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 41831946 - 41831999
Alignment:
Q  99 cgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||||| | ||||||||| |||| |||||||||| ||||||||||||| |||||    
T  41831946 cgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtc 41831999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 153
Target Start/End: Original strand, 18067954 - 18067994
Alignment:
Q  113 acaccgaatcatgtgattttctcaaattattaacggtgtca 153  Q
    |||| |||| |||||||||||||||||||||| ||||||||    
T  18067954 acactgaattatgtgattttctcaaattattagcggtgtca 18067994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 26902176 - 26902216
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttct 134  Q
    |||||||||||||||| |||||| |||| ||||||||||||    
T  26902176 gacaccgacacatataattacactgaattatgtgattttct 26902216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 143
Target Start/End: Complemental strand, 40332248 - 40332200
Alignment:
Q  95 acaccgacacatatagttacaccgaatcatgtgattttctcaaattatt 143  Q
    |||||||||| | || |||||| |||| |||||||||||||||||||||    
T  40332248 acaccgacacttgtaattacactgaattatgtgattttctcaaattatt 40332200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 93 - 152
Target Start/End: Original strand, 5775358 - 5775417
Alignment:
Q  93 tgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    ||||||||||||||||| ||||||  ||| ||||||||||||||||||||||| ||||||    
T  5775358 tgacaccgacacatataattacacttaattatgtgattttctcaaattattaatggtgtc 5775417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 152
Target Start/End: Original strand, 22440609 - 22440659
Alignment:
Q  102 cacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||||||| |||||| |||| ||||||||||||||||||||||||||||||    
T  22440609 cacatataattacactgaattatgtgattttctcaaattattaacggtgtc 22440659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 157
Target Start/End: Original strand, 23861371 - 23861495
Alignment:
Q  34 atgaagcacgaacactctttcaaattaaacgtgtcttggtgtcggatgtgtgttctgtctgacaccgacacatatag--ttacaccgaatcatgtgattt 131  Q
    |||||||||||||||||||| || |||  |||||||||||| | ||  |||||  | |||||||||||||||||||   |||||  ||||||||||||||    
T  23861371 atgaagcacgaacactctttgaa-ttaggcgtgtcttggtgacagacatgtgtcgtatctgacaccgacacatatataattacattgaatcatgtgattt 23861469  T
Q  132 tctcaaattattaacggtgtcagtgt 157  Q
    | |||| |||||| ||||||| ||||    
T  23861470 tatcaatttattagcggtgtcggtgt 23861495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 142
Target Start/End: Original strand, 18576037 - 18576086
Alignment:
Q  93 tgacaccgacacatatagttacaccgaatcatgtgattttctcaaattat 142  Q
    ||||||| ||||||||| ||||||||||| ||||||||||||||||||||    
T  18576037 tgacaccaacacatataattacaccgaattatgtgattttctcaaattat 18576086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 83 - 143
Target Start/End: Complemental strand, 9996909 - 9996849
Alignment:
Q  83 gtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatt 143  Q
    ||||| ||||||||||||| ||||||| ||| || |||| |||||||||||||||||||||    
T  9996909 gtgttatgtctgacaccgagacatataattatactgaattatgtgattttctcaaattatt 9996849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 903971 - 903924
Alignment:
Q  103 acatatagttacaccgaatcatgtgattttctcaaattattaacggtg 150  Q
    ||||||| |||||| |||| ||||||||||||||||||||||||||||    
T  903971 acatataattacactgaattatgtgattttctcaaattattaacggtg 903924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 152
Target Start/End: Original strand, 8423714 - 8423777
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||| ||||||||||  |||| |||||| |||| |||||||||||||||||||||| |||||||    
T  8423714 tgtccgacaccgacatttataattacactgaattatgtgattttctcaaattattagcggtgtc 8423777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 93 - 151
Target Start/End: Complemental strand, 6863212 - 6863154
Alignment:
Q  93 tgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 151  Q
    ||||||||| ||||||| || |||||||| || ||||||| ||||||||||||||||||    
T  6863212 tgacaccgatacatataattgcaccgaattatatgattttttcaaattattaacggtgt 6863154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 15659761 - 15659811
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    |||||| ||||||||| ||||||||||| ||| ||||||||||||||||||    
T  15659761 gacaccaacacatataattacaccgaattatgagattttctcaaattatta 15659811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 152
Target Start/End: Complemental strand, 40613504 - 40613450
Alignment:
Q  98 ccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||||||||||| |||||| |||| |||||||||||||||| ||||| |||||||    
T  40613504 ccgacacatataattacactgaattatgtgattttctcaaaatattagcggtgtc 40613450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 152
Target Start/End: Complemental strand, 11931339 - 11931280
Alignment:
Q  93 tgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    ||||| ||||||||||| ||||||  ||| |||||||||| ||| |||||||||||||||    
T  11931339 tgacatcgacacatatatttacactaaattatgtgattttttcatattattaacggtgtc 11931280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 151
Target Start/End: Complemental strand, 16189765 - 16189710
Alignment:
Q  96 caccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 151  Q
    |||||||||| ||| |||||| |||| |||||||||||||||||| ||| ||||||    
T  16189765 caccgacacacataattacactgaattatgtgattttctcaaatttttagcggtgt 16189710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 33950199 - 33950144
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    ||||||||||||||||||||  |||||   ||| ||||||||||||||||||||||    
T  33950199 tgtctgacaccgacacatatgattacattaaattatgtgattttctcaaattatta 33950144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 144
Target Start/End: Complemental strand, 36635375 - 36635332
Alignment:
Q  101 acacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    ||||||||| |||||| |||| ||||||||||||||||||||||    
T  36635375 acacatataattacactgaattatgtgattttctcaaattatta 36635332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 144
Target Start/End: Original strand, 54580019 - 54580074
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    |||| ||||||||||| |||| |||||| |||| |||||||||| |||||||||||    
T  54580019 tgtccgacaccgacacttataattacactgaattatgtgattttttcaaattatta 54580074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 4672086 - 4672136
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    ||||||||||||||||| ||||| |||| |||| |||||| ||||||||||    
T  4672086 gacaccgacacatatagctacactgaattatgtaattttcccaaattatta 4672136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 151
Target Start/End: Original strand, 30522927 - 30522973
Alignment:
Q  105 atatagttacaccgaatcatgtgattttctcaaattattaacggtgt 151  Q
    |||||||||||| |||| ||||||||||||||||| |||| ||||||    
T  30522927 atatagttacactgaattatgtgattttctcaaataattagcggtgt 30522973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 154
Target Start/End: Original strand, 21720508 - 21720568
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcag 154  Q
    |||||||||| |||||||||||   ||| || ||||||| |||||||||||| ||||||||    
T  21720508 gacaccgacatatatagttacattaaattatatgattttatcaaattattaagggtgtcag 21720568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 144
Target Start/End: Original strand, 28964227 - 28964299
Alignment:
Q  72 gtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    ||||||||| |||||  |||| ||||| ||||| | || |||||| |||| |||||||||| |||||||||||    
T  28964227 gtgtcggatatgtgtcgtgtccgacacagacacttgtaattacactgaattatgtgattttttcaaattatta 28964299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 150
Target Start/End: Original strand, 30982879 - 30982935
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtg 150  Q
    ||||||||||| |||| |||||| |||  ||||||||||||||||| |||| |||||    
T  30982879 gacaccgacacttataattacactgaaatatgtgattttctcaaatcattagcggtg 30982935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 1733 - 1644
Alignment:
Q  63 cgtgtcttggtgtcggatgtgtgttctgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||||| | ||||||||  |||||  |||| ||||||||||| |||| ||| ||| ||| || |||||||||||||||||||||||||||    
T  1733 cgtgtcctagtgtcggacatgtgtcgtgtccgacaccgacacttataattataccaaattatatgattttctcaaattattaacggtgtc 1644  T

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Target: scaffold0168 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 154
Target Start/End: Complemental strand, 21098 - 21041
Alignment:
Q  97 accgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcag 154  Q
    ||||||||||||| ||| ||||| | |||||||||||||||||||||||| |||||||    
T  21098 accgacacatataattataccgacttatgtgattttctcaaattattaaccgtgtcag 21041  T

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Target: scaffold0123 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 154
Target Start/End: Original strand, 44529 - 44586
Alignment:
Q  97 accgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcag 154  Q
    ||||||||||||| |||||| |||| |||||||||||||||||| ||| |||||||||    
T  44529 accgacacatataattacactgaattatgtgattttctcaaatttttagcggtgtcag 44586  T

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Target: scaffold1528 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 157
Target Start/End: Complemental strand, 1092 - 1030
Alignment:
Q  95 acaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtcagtgt 157  Q
    |||| ||||||||||||||||| |||| |||| ||||| ||||||||||| ||||||| ||||    
T  1092 acactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgtcggtgt 1030  T

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Target: scaffold0036 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 9748 - 9798
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattatta 144  Q
    |||||||||||||||| |||||| |||| | ||||||||||||||||||||    
T  9748 gacaccgacacatataattacactgaattaagtgattttctcaaattatta 9798  T

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Target: scaffold0110 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 152
Target Start/End: Complemental strand, 28907 - 28850
Alignment:
Q  95 acaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    ||||||||||||||| |||||  |||| ||| |||||||| |||||||||||||||||    
T  28907 acaccgacacatataattacattgaattatgcgattttcttaaattattaacggtgtc 28850  T

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Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 152
Target Start/End: Original strand, 192267 - 192308
Alignment:
Q  111 ttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    ||||||||||| |||| |||||||||||||||||||||||||    
T  192267 ttacaccgaattatgtaattttctcaaattattaacggtgtc 192308  T

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Target: scaffold0236 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 94 - 153
Target Start/End: Original strand, 25769 - 25828
Alignment:
Q  94 gacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtca 153  Q
    ||||||||||| |||| ||||||  ||| ||||||||||||| |||||||||| ||||||    
T  25769 gacaccgacacttataattacactaaattatgtgattttctctaattattaaccgtgtca 25828  T

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Target: scaffold0050 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 152
Target Start/End: Complemental strand, 70341 - 70278
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgtc 152  Q
    |||| ||||||||||| |||| |||||| |||| |||| ||||| ||||||||||||| |||||    
T  70341 tgtccgacaccgacacttataattacactgaattatgttattttttcaaattattaactgtgtc 70278  T

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Target: scaffold0044 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 143
Target Start/End: Complemental strand, 53236 - 53189
Alignment:
Q  96 caccgacacatatagttacaccgaatcatgtgattttctcaaattatt 143  Q
    ||||||||| |||| |||||| |||| |||||||||||||||||||||    
T  53236 caccgacacttataattacactgaattatgtgattttctcaaattatt 53189  T

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Target: scaffold0049 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 151
Target Start/End: Complemental strand, 63836 - 63774
Alignment:
Q  89 tgtctgacaccgacacatatagttacaccgaatcatgtgattttctcaaattattaacggtgt 151  Q
    |||||||||||||||| | || || ||| |||| |||| ||||||||||||||||| ||||||    
T  63836 tgtctgacaccgacacttgtaattgcactgaattatgtaattttctcaaattattagcggtgt 63774  T

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