View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11747_high_16 (Length: 335)
Name: NF11747_high_16
Description: NF11747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11747_high_16 |
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Alignment Details
Target: chr7 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 14 - 178
Target Start/End: Original strand, 41695555 - 41695719
Alignment:
| Q |
14 |
agaatgtgttcagttaaacaatttcactgttaataagataacaaaataacatttcacatatataatgtacattttcatgctttaatttaatttatagaaa |
113 |
Q |
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| T |
41695555 |
agaatgtgctcgtttaaacaatttcactattaataagataacacaataacatttcacatatataatatacattttcatgttataatttaatttatagaaa |
41695654 |
T |
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| Q |
114 |
atgagtggcctctaatgtatatgtcacaccaagccttccaatcaaatatgcattcaactttttgt |
178 |
Q |
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| T |
41695655 |
atgagtgacatctaatatatctgtcacgctaagccttccaatcaaatatgtattctgctttttgt |
41695719 |
T |
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Target: chr7; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 86 - 178
Target Start/End: Original strand, 41698042 - 41698134
Alignment:
| Q |
86 |
tttcatgctttaatttaatttatagaaaatgagtggcctctaatgtatatgtcacaccaagccttccaatcaaatatgcattcaactttttgt |
178 |
Q |
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| T |
41698042 |
tttcatgctttaatttaatttatagtaaatgagtggcctctaatgtatatgtcacatcaagccttccaatcaaatatgcattcaactttttgt |
41698134 |
T |
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