View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11747_high_28 (Length: 243)
Name: NF11747_high_28
Description: NF11747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11747_high_28 |
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Alignment Details
Target: chr1 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 35 - 226
Target Start/End: Complemental strand, 13793385 - 13793193
Alignment:
| Q |
35 |
aatagcaacactaaataaaataacactataaaatcttaa-gaacatgtgcccttagcaacaaagaaaaacctccaatctcttcttctccttcttcaactt |
133 |
Q |
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| T |
13793385 |
aatagcaacactaaataaaataacactataaaatcttaaagaacatgtgcccttagcaacaaagaaaaacctccaatctcttcttctccttcttcaactt |
13793286 |
T |
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| Q |
134 |
tctctgccaaaacaacaacaacaaatggacacactcaacaccacactcctcattctcttcatcttcatcttcctccaaatcctctattccttt |
226 |
Q |
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| T |
13793285 |
tctctgccacaacaacaacaacaaatggacacactcaacactacactcctcattctcttcatcttcatcttcctccaaatcctctattccttt |
13793193 |
T |
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