View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11747_high_37 (Length: 210)
Name: NF11747_high_37
Description: NF11747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11747_high_37 |
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Alignment Details
Target: chr2 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 13 - 158
Target Start/End: Original strand, 37023775 - 37023916
Alignment:
| Q |
13 |
aattgatcaagtaaatattatgttgctaaatcttgttccatacaagcacattttggttcaactttgtattatacaagcacttcttgtattcg-nnnnnnn |
111 |
Q |
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| T |
37023775 |
aattgatcaagtaaatattatgttgctaaatcttgttccatacaagcacattttggttcaac-----attatacaagcacttcttgtattcgtttttttt |
37023869 |
T |
|
| Q |
112 |
cattactttcttcttgatattttagttagcaaactagaatagtgtag |
158 |
Q |
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| T |
37023870 |
cattactttcttcttgatattttagttagcaaactagaatagtgtag |
37023916 |
T |
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