View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11747_low_33 (Length: 241)
Name: NF11747_low_33
Description: NF11747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11747_low_33 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 19 - 241
Target Start/End: Original strand, 33992273 - 33992489
Alignment:
| Q |
19 |
acttgaaaacaaaatgttatttgtcccgaaaaatataattcaggagaacatcacgaacataagtgtaagcatatattttatgtcattcatcagtccagtt |
118 |
Q |
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| T |
33992273 |
acttgaaaacaaaatgttatttgtcccgaaaaatataattcaggagaacatcacgaacataagtgtaagcatatattttatgtcattcatcagtccagtt |
33992372 |
T |
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| Q |
119 |
tatttttacatgtatattaatcaaggtttaaatgaggtctcctattttcaatagtttaattatttatatttatatttatatgacatatagtgcaacatat |
218 |
Q |
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| T |
33992373 |
tttttttacatgtatattaatcaaggtttaaatgaggtctcctattttcaatagtttaat------tatttatatttatatgacatatagtgcaacatat |
33992466 |
T |
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| Q |
219 |
gattacatttcatgaaaaatatt |
241 |
Q |
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| T |
33992467 |
gattacatttcatgaaaaatatt |
33992489 |
T |
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