View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11748_high_10 (Length: 229)
Name: NF11748_high_10
Description: NF11748
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11748_high_10 |
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Alignment Details
Target: chr8 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 37279578 - 37279801
Alignment:
| Q |
1 |
tcttgttatccaaaatttcattcaaattaaccattgcacattgctgcaaattaacagcnnnnnnnctaattcctttgcagacatggaacaatattaaacc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
37279578 |
tcttgttatccaaaatttcattcaaattaaccattgcacattgctgcaaattaacagcaaaaaaactaattcctttgcagacatggaacaatattaaacc |
37279677 |
T |
|
| Q |
101 |
aaacagacatagcattcggacagtcatggagtgcgtgcagcgacgtttccactgtacctttacacttcatacaaagagcatcaccaagatgcattctact |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37279678 |
aaacagacatagcattcggacagtcatggagtgcgtgcagcgacgtttccactgtacctttacacttcatacaaagagcatcaccaagatgcattctact |
37279777 |
T |
|
| Q |
201 |
cttgtggtaattggtaagcaacct |
224 |
Q |
| |
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|||||||||||||||||||||||| |
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| T |
37279778 |
cttgtggtaattggtaagcaacct |
37279801 |
T |
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