View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1174_high_12 (Length: 251)

Name: NF1174_high_12
Description: NF1174
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1174_high_12
NF1174_high_12
[»] chr3 (48 HSPs)
chr3 (12-227)||(47056543-47056762)
chr3 (12-66)||(27646498-27646552)
chr3 (12-66)||(49886694-49886748)
chr3 (12-69)||(47141617-47141674)
chr3 (12-66)||(39604263-39604317)
chr3 (12-69)||(31176457-31176514)
chr3 (14-67)||(52100260-52100313)
chr3 (12-68)||(1834504-1834560)
chr3 (12-68)||(25559702-25559758)
chr3 (14-66)||(47849672-47849724)
chr3 (12-63)||(41369600-41369651)
chr3 (12-67)||(41877687-41877742)
chr3 (12-69)||(29573372-29573430)
chr3 (12-66)||(35376568-35376622)
chr3 (12-66)||(37754447-37754501)
chr3 (12-66)||(43409379-43409433)
chr3 (12-66)||(49761203-49761257)
chr3 (12-66)||(50025715-50025769)
chr3 (12-66)||(53932408-53932462)
chr3 (12-67)||(462418-462473)
chr3 (12-67)||(1295331-1295386)
chr3 (16-67)||(7949790-7949841)
chr3 (12-67)||(11327107-11327162)
chr3 (12-66)||(26550237-26550292)
chr3 (12-66)||(27168698-27168753)
chr3 (18-69)||(28300283-28300334)
chr3 (12-66)||(28920066-28920121)
chr3 (12-67)||(42643234-42643289)
chr3 (12-66)||(108431-108485)
chr3 (12-66)||(7351655-7351709)
chr3 (12-66)||(11335319-11335373)
chr3 (12-66)||(12792638-12792692)
chr3 (12-66)||(16267914-16267968)
chr3 (12-66)||(20215948-20216002)
chr3 (12-66)||(27162486-27162540)
chr3 (16-62)||(41348999-41349045)
chr3 (12-66)||(53133969-53134023)
chr3 (14-66)||(349431-349484)
chr3 (12-69)||(2482691-2482748)
chr3 (13-66)||(5398918-5398971)
chr3 (18-67)||(20893265-20893314)
chr3 (12-65)||(40419659-40419712)
chr3 (14-67)||(52678596-52678649)
chr3 (12-63)||(1436819-1436871)
chr3 (41-69)||(32722191-32722219)
chr3 (16-64)||(44080785-44080833)
chr3 (12-68)||(48944727-48944783)
chr3 (14-66)||(55466958-55467010)
[»] chr7 (32 HSPs)
chr7 (70-159)||(44196574-44196663)
chr7 (12-66)||(28081799-28081853)
chr7 (12-66)||(42060656-42060710)
chr7 (12-66)||(43079649-43079703)
chr7 (12-66)||(46829479-46829534)
chr7 (12-66)||(38023441-38023495)
chr7 (12-65)||(2790178-2790231)
chr7 (12-69)||(33212039-33212096)
chr7 (16-68)||(29763828-29763880)
chr7 (12-71)||(30941173-30941232)
chr7 (12-67)||(33050182-33050237)
chr7 (15-66)||(42467204-42467255)
chr7 (12-67)||(42476562-42476617)
chr7 (12-69)||(6269363-6269421)
chr7 (12-66)||(19426580-19426634)
chr7 (20-66)||(25940657-25940703)
chr7 (12-66)||(40077254-40077308)
chr7 (12-65)||(17039158-17039211)
chr7 (12-65)||(35212972-35213025)
chr7 (12-69)||(37969928-37969985)
chr7 (41-69)||(6353722-6353750)
chr7 (12-67)||(7295449-7295505)
chr7 (14-66)||(11070228-11070280)
chr7 (41-69)||(11789737-11789765)
chr7 (16-64)||(21153052-21153100)
chr7 (15-67)||(23844964-23845016)
chr7 (13-69)||(27125570-27125626)
chr7 (12-68)||(30538624-30538680)
chr7 (12-68)||(41458917-41458973)
chr7 (12-64)||(41890529-41890581)
chr7 (15-67)||(42118715-42118766)
chr7 (12-68)||(44175543-44175599)
[»] chr1 (34 HSPs)
chr1 (12-62)||(43056720-43056770)
chr1 (12-69)||(49621360-49621417)
chr1 (12-68)||(3919298-3919354)
chr1 (12-63)||(47113277-47113328)
chr1 (12-66)||(26501295-26501349)
chr1 (12-66)||(43457836-43457890)
chr1 (12-66)||(7203861-7203915)
chr1 (12-66)||(27352630-27352684)
chr1 (12-66)||(39128410-39128464)
chr1 (12-67)||(46281435-46281491)
chr1 (12-66)||(1156479-1156533)
chr1 (12-66)||(2827727-2827781)
chr1 (12-66)||(27563484-27563538)
chr1 (12-66)||(39815346-39815400)
chr1 (12-66)||(51193148-51193202)
chr1 (14-66)||(11038262-11038314)
chr1 (12-66)||(21433417-21433472)
chr1 (12-66)||(12999839-12999893)
chr1 (12-66)||(18541068-18541122)
chr1 (12-66)||(29489376-29489430)
chr1 (12-66)||(40605438-40605492)
chr1 (18-68)||(42615858-42615908)
chr1 (16-66)||(49189229-49189279)
chr1 (12-66)||(49596235-49596289)
chr1 (12-66)||(50777440-50777494)
chr1 (14-67)||(9445107-9445160)
chr1 (12-57)||(32196647-32196692)
chr1 (16-69)||(34157803-34157856)
chr1 (12-65)||(36231723-36231776)
chr1 (17-66)||(39669806-39669855)
chr1 (14-66)||(1100217-1100269)
chr1 (12-68)||(30505353-30505409)
chr1 (14-66)||(43755697-43755749)
chr1 (12-67)||(49569995-49570051)
[»] chr5 (27 HSPs)
chr5 (12-62)||(36786275-36786325)
chr5 (13-66)||(2050927-2050980)
chr5 (12-68)||(36581482-36581538)
chr5 (12-66)||(6940166-6940221)
chr5 (12-67)||(22920509-22920564)
chr5 (12-66)||(20985546-20985600)
chr5 (13-67)||(36416080-36416134)
chr5 (12-66)||(41192587-41192641)
chr5 (14-66)||(14914372-14914424)
chr5 (14-69)||(16690496-16690552)
chr5 (12-68)||(31708368-31708424)
chr5 (14-66)||(38500943-38500995)
chr5 (12-68)||(39788723-39788779)
chr5 (12-66)||(18695318-18695373)
chr5 (12-66)||(8726401-8726455)
chr5 (12-66)||(19271859-19271913)
chr5 (16-66)||(29402182-29402232)
chr5 (14-67)||(6538869-6538922)
chr5 (12-69)||(12661964-12662021)
chr5 (12-68)||(9599745-9599801)
chr5 (12-68)||(15639383-15639439)
chr5 (12-67)||(22098254-22098310)
chr5 (12-68)||(31006057-31006113)
chr5 (18-66)||(31626099-31626147)
chr5 (12-68)||(34381010-34381066)
chr5 (14-69)||(38293377-38293433)
chr5 (27-67)||(40829413-40829453)
[»] chr8 (42 HSPs)
chr8 (12-69)||(11114686-11114743)
chr8 (12-69)||(14548840-14548897)
chr8 (12-67)||(35937529-35937584)
chr8 (12-66)||(38504170-38504224)
chr8 (12-69)||(10344321-10344378)
chr8 (12-68)||(31806297-31806353)
chr8 (14-69)||(20473776-20473831)
chr8 (12-67)||(29509265-29509320)
chr8 (12-66)||(3650113-3650167)
chr8 (12-66)||(28156203-28156257)
chr8 (12-66)||(32674249-32674303)
chr8 (20-67)||(3775896-3775943)
chr8 (15-66)||(6849488-6849539)
chr8 (12-66)||(10644818-10644873)
chr8 (12-63)||(11089579-11089630)
chr8 (12-66)||(35067160-35067215)
chr8 (11-66)||(37343374-37343429)
chr8 (12-66)||(38675603-38675658)
chr8 (12-63)||(42130999-42131050)
chr8 (12-66)||(1158352-1158406)
chr8 (12-66)||(8888252-8888306)
chr8 (12-66)||(12045670-12045724)
chr8 (12-66)||(16699585-16699639)
chr8 (16-66)||(20852919-20852969)
chr8 (12-69)||(25830262-25830320)
chr8 (12-66)||(30927948-30928002)
chr8 (12-66)||(34641545-34641599)
chr8 (12-66)||(35818937-35818991)
chr8 (12-66)||(36740314-36740368)
chr8 (12-66)||(37784391-37784445)
chr8 (12-66)||(42716320-42716374)
chr8 (14-67)||(28623130-28623183)
chr8 (14-67)||(43873710-43873763)
chr8 (14-66)||(1332487-1332539)
chr8 (13-69)||(7129530-7129586)
chr8 (41-69)||(22767129-22767157)
chr8 (27-63)||(35345423-35345459)
chr8 (41-77)||(36675325-36675361)
chr8 (14-66)||(39021462-39021514)
chr8 (12-67)||(42786676-42786732)
chr8 (12-64)||(43186298-43186350)
chr8 (14-66)||(43602442-43602494)
[»] chr6 (19 HSPs)
chr6 (12-67)||(16743283-16743338)
chr6 (12-67)||(25924881-25924936)
chr6 (12-69)||(25995439-25995496)
chr6 (12-69)||(28883765-28883822)
chr6 (12-68)||(27102113-27102169)
chr6 (12-68)||(27143935-27143991)
chr6 (12-63)||(34570611-34570663)
chr6 (12-66)||(3339516-3339570)
chr6 (16-66)||(11785355-11785405)
chr6 (12-66)||(15364658-15364712)
chr6 (12-66)||(17417252-17417306)
chr6 (12-66)||(26668496-26668550)
chr6 (12-66)||(28965857-28965911)
chr6 (16-66)||(34413092-34413142)
chr6 (12-69)||(6997567-6997624)
chr6 (13-66)||(8778890-8778943)
chr6 (12-69)||(25554242-25554299)
chr6 (12-69)||(26094902-26094959)
chr6 (11-66)||(25127848-25127904)
[»] chr2 (38 HSPs)
chr2 (12-67)||(6328666-6328721)
chr2 (12-67)||(9695078-9695133)
chr2 (12-66)||(44484673-44484727)
chr2 (14-67)||(33559638-33559691)
chr2 (12-65)||(34373006-34373059)
chr2 (12-67)||(12784415-12784471)
chr2 (12-66)||(1298194-1298248)
chr2 (12-66)||(5954500-5954554)
chr2 (12-66)||(11442672-11442726)
chr2 (12-66)||(13553147-13553201)
chr2 (13-66)||(36909861-36909914)
chr2 (12-68)||(25094350-25094406)
chr2 (12-66)||(5031923-5031978)
chr2 (20-67)||(5095978-5096025)
chr2 (12-67)||(12600047-12600102)
chr2 (12-67)||(13850201-13850256)
chr2 (12-67)||(18749380-18749435)
chr2 (13-63)||(40599295-40599346)
chr2 (12-66)||(10288150-10288204)
chr2 (12-66)||(15283267-15283321)
chr2 (12-69)||(18876938-18876996)
chr2 (12-66)||(30413743-30413797)
chr2 (12-66)||(31635827-31635881)
chr2 (12-65)||(33030119-33030173)
chr2 (12-66)||(34144568-34144622)
chr2 (12-66)||(35171243-35171297)
chr2 (12-66)||(39737703-39737757)
chr2 (12-65)||(9384376-9384429)
chr2 (12-69)||(29192668-29192725)
chr2 (12-69)||(32688561-32688618)
chr2 (16-69)||(38021353-38021406)
chr2 (12-68)||(19631384-19631440)
chr2 (14-66)||(19637229-19637281)
chr2 (12-68)||(19828285-19828341)
chr2 (14-66)||(19835822-19835874)
chr2 (27-67)||(21738648-21738688)
chr2 (12-68)||(33857215-33857271)
chr2 (12-67)||(40210084-40210140)
[»] chr4 (50 HSPs)
chr4 (12-58)||(6239388-6239434)
chr4 (12-62)||(33484125-33484175)
chr4 (12-66)||(40721981-40722035)
chr4 (12-66)||(49768886-49768940)
chr4 (12-69)||(8680938-8680995)
chr4 (13-66)||(44170637-44170690)
chr4 (12-68)||(44165907-44165963)
chr4 (12-68)||(51224855-51224911)
chr4 (12-67)||(45286132-45286187)
chr4 (12-66)||(47288082-47288137)
chr4 (12-66)||(9472530-9472584)
chr4 (12-66)||(20056396-20056450)
chr4 (12-66)||(29513713-29513767)
chr4 (12-66)||(31318753-31318807)
chr4 (12-66)||(40629357-40629411)
chr4 (12-66)||(53662445-53662499)
chr4 (12-66)||(56025256-56025310)
chr4 (18-66)||(28203392-28203440)
chr4 (14-66)||(29863551-29863603)
chr4 (12-68)||(36812420-36812476)
chr4 (14-66)||(51389316-51389368)
chr4 (15-67)||(54251470-54251522)
chr4 (18-65)||(45548807-45548854)
chr4 (12-66)||(149304-149358)
chr4 (12-66)||(1562553-1562607)
chr4 (12-66)||(1987730-1987784)
chr4 (12-66)||(4577557-4577611)
chr4 (12-58)||(5466512-5466558)
chr4 (12-66)||(12638825-12638879)
chr4 (12-66)||(43358613-43358667)
chr4 (12-66)||(47998594-47998648)
chr4 (12-66)||(48722069-48722123)
chr4 (12-66)||(49424837-49424891)
chr4 (12-66)||(51107458-51107512)
chr4 (12-66)||(53763828-53763882)
chr4 (12-66)||(54165178-54165232)
chr4 (13-66)||(13267496-13267549)
chr4 (14-67)||(32901328-32901381)
chr4 (22-63)||(33575076-33575117)
chr4 (12-69)||(39010154-39010211)
chr4 (14-63)||(40308444-40308493)
chr4 (14-67)||(44250246-44250299)
chr4 (12-65)||(46844258-46844311)
chr4 (12-68)||(1031753-1031809)
chr4 (12-67)||(3078924-3078980)
chr4 (41-69)||(3968882-3968910)
chr4 (12-68)||(18568832-18568888)
chr4 (12-68)||(20956599-20956655)
chr4 (14-66)||(23094376-23094428)
chr4 (12-68)||(55996420-55996476)
[»] scaffold0651 (1 HSPs)
scaffold0651 (12-66)||(4863-4917)
[»] scaffold0087 (1 HSPs)
scaffold0087 (12-66)||(27080-27134)
[»] scaffold0019 (1 HSPs)
scaffold0019 (12-66)||(72366-72420)
[»] scaffold0049 (1 HSPs)
scaffold0049 (13-66)||(72187-72240)
[»] scaffold0011 (1 HSPs)
scaffold0011 (12-69)||(18592-18649)
[»] scaffold0522 (1 HSPs)
scaffold0522 (12-67)||(2521-2576)
[»] scaffold0172 (1 HSPs)
scaffold0172 (12-67)||(16974-17029)
[»] scaffold0576 (1 HSPs)
scaffold0576 (12-66)||(9429-9483)
[»] scaffold0178 (1 HSPs)
scaffold0178 (14-67)||(9775-9829)
[»] scaffold0119 (1 HSPs)
scaffold0119 (12-66)||(2243-2297)
[»] scaffold0085 (1 HSPs)
scaffold0085 (13-63)||(31316-31366)
[»] scaffold0018 (1 HSPs)
scaffold0018 (12-66)||(36002-36056)
[»] scaffold0032 (2 HSPs)
scaffold0032 (18-66)||(17436-17484)
scaffold0032 (15-71)||(35973-36029)
[»] scaffold0020 (1 HSPs)
scaffold0020 (12-68)||(155904-155960)


Alignment Details
Target: chr3 (Bit Score: 183; Significance: 4e-99; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 12 - 227
Target Start/End: Original strand, 47056543 - 47056762
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaatgcttaatgttacgagaaagttcaagcaagaaatgcacgaaca 111  Q
    ||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  47056543 agagagaaagttgtccaaaaattgttgcaaaatggttgcacaaatatcatttctcaatgtttaatgttacgggaaagttcaagcaagaaatgcacgaaca 47056642  T
Q  112 gatcaggtccctagaatttaaccaaggaacggccatgatttccatctttcacggaactaatattttccagtttatctaaagcc----aaatatatatagt 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||    
T  47056643 gatcaggtccctagaatttaaccaaggaacggccatgatttccatctttcacggaactaatattttccagtttatctaaagccaaataaatatatatagt 47056742  T
Q  208 cattcttgcttttcttgcac 227  Q
    ||||||||||||||||||||    
T  47056743 cattcttgcttttcttgcac 47056762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 27646552 - 27646498
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  27646552 agagataaagttgtccaaaaattattgcaaaatgattgtacaaatatcatttctc 27646498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 49886748 - 49886694
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| ||||||||| || ||||||||||||||||||||||||||    
T  49886748 agagagaaagttgtctaaaaattatagcaaaatggttgtacaaatatcatttctc 49886694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 47141617 - 47141674
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaat 69  Q
    |||||||||||||| ||||||||||  | |||||||||||||||||||||||||||||    
T  47141617 agagagaaagttgtacaaaaattataccaaaatggttgtacaaatatcatttctcaat 47141674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 39604263 - 39604317
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| ||||||| |||  ||||||||||||||||||||||||||    
T  39604263 agagagaaagttgtcaaaaaattgttgaaaaatggttgtacaaatatcatttctc 39604317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 31176457 - 31176514
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaat 69  Q
    ||||||||||||||| |||||||||  | || ||||||||||||||||||||||||||    
T  31176457 agagagaaagttgtctaaaaattatcacaaagtggttgtacaaatatcatttctcaat 31176514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 52100313 - 52100260
Alignment:
Q  14 agagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    |||||||||||| |||||||||||   |||||||||||||||||||||||||||    
T  52100313 agagaaagttgtacaaaaattattaaaaaatggttgtacaaatatcatttctca 52100260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 1834560 - 1834504
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaa 68  Q
    |||||||||||||| |||||||| | || |||||||||||||||||| |||||||||    
T  1834560 agagagaaagttgttcaaaaattgtagcaaaatggttgtacaaatattatttctcaa 1834504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 25559758 - 25559702
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaa 68  Q
    ||||||||||||||  |||||||||  | ||||||||||||||||||||||||||||    
T  25559758 agagagaaagttgtataaaaattataccaaaatggttgtacaaatatcatttctcaa 25559702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 47849724 - 47849672
Alignment:
Q  14 agagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||| |||||||||  | ||||||||||||||||||||||||||    
T  47849724 agagaaagttgtcaaaaaattatcacaaaatggttgtacaaatatcatttctc 47849672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 41369651 - 41369600
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcattt 63  Q
    ||||||||||||||| ||||||||||   |||||||||||||||||||||||    
T  41369651 agagagaaagttgtcaaaaaattattagaaaatggttgtacaaatatcattt 41369600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 41877742 - 41877687
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    ||||||||||||||| |||| || | || |||||||||||||||||||||||||||    
T  41877742 agagagaaagttgtcaaaaagttgtagcaaaatggttgtacaaatatcatttctca 41877687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 29573372 - 29573430
Alignment:
Q  12 agagagaaagttgtc-caaaaattattgcgaaatggttgtacaaatatcatttctcaat 69  Q
    ||||||||||||||| ||||| || || | |||||||||||||||||||||||||||||    
T  29573372 agagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcatttctcaat 29573430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 35376568 - 35376622
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| ||||||| |  | ||||||||||||||||||||||||||    
T  35376568 agagagaaagttgtctaaaaattgtcacaaaatggttgtacaaatatcatttctc 35376622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 37754501 - 37754447
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||||||||||||||   |||| | |||||||||||||||||||    
T  37754501 agagagaaagttgtccaaaaattattataaaatagatgtacaaatatcatttctc 37754447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 43409379 - 43409433
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||| ||||||||||||  | || |||||||||||||||||||||||    
T  43409379 agagagaaagttttccaaaaattatcacaaagtggttgtacaaatatcatttctc 43409433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 49761203 - 49761257
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||||| |||||||| ||   ||||||||||||||||||||||||||    
T  49761203 agagagaaagttgtacaaaaattgttagaaaatggttgtacaaatatcatttctc 49761257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 50025715 - 50025769
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||||| ||||| ||||  | ||||||||||||||||||||||||||    
T  50025715 agagagaaagttgtacaaaatttataccaaaatggttgtacaaatatcatttctc 50025769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 53932408 - 53932462
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||| |||||||||||||||||| |  | ||||||||||||||||||||||||||    
T  53932408 agagtgaaagttgtccaaaaattgtcacaaaatggttgtacaaatatcatttctc 53932462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 462418 - 462473
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    ||||||||||||||| |||| || |  | |||||||||||||||||||||||||||    
T  462418 agagagaaagttgtctaaaagttgtcacaaaatggttgtacaaatatcatttctca 462473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 1295386 - 1295331
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    ||||| |||||||||||||| ||||  | |||| ||||||||||||||||||||||    
T  1295386 agagaaaaagttgtccaaaagttatcacaaaatagttgtacaaatatcatttctca 1295331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 7949841 - 7949790
Alignment:
Q  16 agaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    ||||||||||| |||| || | || |||||||||||||||||||||||||||    
T  7949841 agaaagttgtcaaaaagttgtagcaaaatggttgtacaaatatcatttctca 7949790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 11327162 - 11327107
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    |||||||||||||| ||||| || |  | |||||||||||||||||||||||||||    
T  11327162 agagagaaagttgtacaaaagttgtcacaaaatggttgtacaaatatcatttctca 11327107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 26550292 - 26550237
Alignment:
Q  12 agagagaaagttgtc-caaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| |||||||||||   |||||||||| |||||||||||||||    
T  26550292 agagagaaagttgtcacaaaaattattaaaaaatggttgtgcaaatatcatttctc 26550237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 27168698 - 27168753
Alignment:
Q  12 agagagaaagttgtc-caaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| |||||||||||   |||||||||| |||||||||||||||    
T  27168698 agagagaaagttgtcacaaaaattattaaaaaatggttgttcaaatatcatttctc 27168753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 28300334 - 28300283
Alignment:
Q  18 aaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaat 69  Q
    ||||||||| |||||||||    |||||||||||||||||||||||||||||    
T  28300334 aaagttgtcaaaaaattataataaaatggttgtacaaatatcatttctcaat 28300283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 28920066 - 28920121
Alignment:
Q  12 agagagaaagttgtc-caaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| |||||||||||   |||| |||||||||||||||||||||    
T  28920066 agagagaaagttgtcacaaaaattattatcaaatagttgtacaaatatcatttctc 28920121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 42643289 - 42643234
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    |||||||||||||| ||||| || || | || ||||||||||||||||||||||||    
T  42643289 agagagaaagttgtacaaaagttgttccaaattggttgtacaaatatcatttctca 42643234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 108485 - 108431
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| ||||||| |  | || |||||||||||||||||||||||    
T  108485 agagagaaagttgtcaaaaaattgtcacaaagtggttgtacaaatatcatttctc 108431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 7351655 - 7351709
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||| |||| ||||||||||    ||||||||||||||||||||||||||    
T  7351655 agagagaaaattgtacaaaaattatacaaaaatggttgtacaaatatcatttctc 7351709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 11335319 - 11335373
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| |||| || ||   ||||||||||||||||||||||||||    
T  11335319 agagagaaagttgtcaaaaagttgttagaaaatggttgtacaaatatcatttctc 11335373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 12792692 - 12792638
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| ||||||| |  | || |||||||||||||||||||||||    
T  12792692 agagagaaagttgtctaaaaattgtcacaaagtggttgtacaaatatcatttctc 12792638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 16267914 - 16267968
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||||| |||||||||||   ||||| || |||||||||||||||||    
T  16267914 agagagaaagttgttcaaaaattattagaaaatgattatacaaatatcatttctc 16267968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 20216002 - 20215948
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| ||||||| |  | || |||||||||||||||||||||||    
T  20216002 agagagaaagttgtctaaaaattgtcacaaagtggttgtacaaatatcatttctc 20215948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 27162486 - 27162540
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||||| ||||| || || | |||||||||||||||||||| |||||    
T  27162486 agagagaaagttgttcaaaagttgttacaaaatggttgtacaaatatcacttctc 27162540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 41348999 - 41349045
Alignment:
Q  16 agaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatt 62  Q
    ||||||||||| |||||||||  | ||||||||||||||||||||||    
T  41348999 agaaagttgtctaaaaattatcacaaaatggttgtacaaatatcatt 41349045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 53133969 - 53134023
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||  ||||||||||   |||||||| |||||||||||||||||    
T  53133969 agagagaaagttgttaaaaaattattataaaatggttttacaaatatcatttctc 53134023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 349431 - 349484
Alignment:
Q  14 agagaaagttgtc-caaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||| | |||||||||||   ||||||||||||||||||||||||||    
T  349431 agagaaagttgccacaaaaattattataaaatggttgtacaaatatcatttctc 349484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 2482691 - 2482748
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaat 69  Q
    |||||||||||||| ||||| || |  | |||||| ||||||||||||||||||||||    
T  2482691 agagagaaagttgttcaaaagttgtcacaaaatggatgtacaaatatcatttctcaat 2482748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 5398971 - 5398918
Alignment:
Q  13 gagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||||| ||||||| |  | || |||||||||||||||||||||||    
T  5398971 gagagaaagttgtcaaaaaattgtcacaaagtggttgtacaaatatcatttctc 5398918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 20893265 - 20893314
Alignment:
Q  18 aaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    ||||||||| |||||||||  | |||||||||||||||||| ||||||||    
T  20893265 aaagttgtcaaaaaattatcacaaaatggttgtacaaatattatttctca 20893314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 40419659 - 40419712
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttct 65  Q
    ||||||||| ||||| |||||||||  | ||||| |||||||||||||||||||    
T  40419659 agagagaaaattgtctaaaaattatcacaaaatgattgtacaaatatcatttct 40419712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 52678596 - 52678649
Alignment:
Q  14 agagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    ||||||||||||| ||||||||||   || ||||||||||||| ||||||||||    
T  52678596 agagaaagttgtcaaaaaattattagaaattggttgtacaaatgtcatttctca 52678649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 1436871 - 1436819
Alignment:
Q  12 agagagaaagttgtc-caaaaattattgcgaaatggttgtacaaatatcattt 63  Q
    |||||||| |||||| ||||| |||||  ||||||||||||||||||||||||    
T  1436871 agagagaatgttgtctcaaaagttattaggaaatggttgtacaaatatcattt 1436819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 69
Target Start/End: Original strand, 32722191 - 32722219
Alignment:
Q  41 aaatggttgtacaaatatcatttctcaat 69  Q
    |||||||||||||||||||||||||||||    
T  32722191 aaatggttgtacaaatatcatttctcaat 32722219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 44080785 - 44080833
Alignment:
Q  16 agaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttc 64  Q
    |||||||||| ||||||||||||| ||||  || |||||||||||||||    
T  44080785 agaaagttgttcaaaaattattgcaaaataattatacaaatatcatttc 44080833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 48944727 - 48944783
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaa 68  Q
    ||||||||| |||| ||||| || ||   ||||||||||||||||||||||||||||    
T  48944727 agagagaaaattgtacaaaagttgttagaaaatggttgtacaaatatcatttctcaa 48944783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 55467010 - 55466958
Alignment:
Q  14 agagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||| ||||||| ||||||| ||   ||||||||||||||||||||||||||    
T  55467010 agagatagttgtcaaaaaattcttataaaatggttgtacaaatatcatttctc 55466958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 70 - 159
Target Start/End: Complemental strand, 44196663 - 44196574
Alignment:
Q  70 gcttaatgttacgagaaagttcaagcaagaaatgcacgaacagatcaggtccctagaatttaaccaaggaacggccatgatttccatctt 159  Q
    ||||||||||||  |||||||||||||||||||||||||| ||||||||| | || ||||||||||||||||| ||||||||||| ||||    
T  44196663 gcttaatgttacaggaaagttcaagcaagaaatgcacgaatagatcaggttcttataatttaaccaaggaacgaccatgatttccgtctt 44196574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 28081799 - 28081853
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||  |||||||||| | ||||||||||||||||||||||||||    
T  28081799 agagagaaagttgtaaaaaaattattacaaaatggttgtacaaatatcatttctc 28081853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 42060710 - 42060656
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| |||| |||| || ||||||||||||||||||||||||||    
T  42060710 agagagaaagttgtcaaaaagttatagcaaaatggttgtacaaatatcatttctc 42060656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 43079649 - 43079703
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||||||||||||||||  | || |||||||||||||||||||||||    
T  43079649 agagagaaagttgtccaaaaattatcacaaagtggttgtacaaatatcatttctc 43079703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 46829534 - 46829479
Alignment:
Q  12 agagagaaagttgtc-caaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| |||||||| || | ||||||||||||||||||||||||||    
T  46829534 agagagaaagttgtcacaaaaattgttacaaaatggttgtacaaatatcatttctc 46829479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 38023441 - 38023495
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| |||||||||  | || |||||||||||||||||||||||    
T  38023441 agagagaaagttgtctaaaaattatcacaaagtggttgtacaaatatcatttctc 38023495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 2790231 - 2790178
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttct 65  Q
    ||||||||||||||| ||||||| || | || ||||||||||||||||||||||    
T  2790231 agagagaaagttgtcaaaaaattgttacaaagtggttgtacaaatatcatttct 2790178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 33212096 - 33212039
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaat 69  Q
    ||||| ||||||||| ||||||| ||   |||||||||||||||||||||||||||||    
T  33212096 agagataaagttgtcaaaaaattgttagaaaatggttgtacaaatatcatttctcaat 33212039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 29763880 - 29763828
Alignment:
Q  16 agaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaa 68  Q
    |||||||||| ||||| ||||  | ||||||||||||||||||||||||||||    
T  29763880 agaaagttgtacaaaagttatcacaaaatggttgtacaaatatcatttctcaa 29763828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 30941232 - 30941173
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaatgc 71  Q
    |||||||||||| || ||||||| || | || ||||||||||||||||||||||| ||||    
T  30941232 agagagaaagttatctaaaaattgttacaaagtggttgtacaaatatcatttctctatgc 30941173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 33050237 - 33050182
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    |||||||||||||| ||||| || |  | |||||||||||||||||||||||||||    
T  33050237 agagagaaagttgtacaaaagttgtcacaaaatggttgtacaaatatcatttctca 33050182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 42467255 - 42467204
Alignment:
Q  15 gagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||| |||| ||||||||||   ||||||||||||||||||||||||||    
T  42467255 gagaaagctgtctaaaaattattaaaaaatggttgtacaaatatcatttctc 42467204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 42476562 - 42476617
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    ||||||||||||||||||||||| ||   |||  ||||||||||||||||||||||    
T  42476562 agagagaaagttgtccaaaaattgttagaaaaatgttgtacaaatatcatttctca 42476617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 6269421 - 6269363
Alignment:
Q  12 agagagaaagttgtc-caaaaattattgcgaaatggttgtacaaatatcatttctcaat 69  Q
    ||||||||||||||| |||||||| ||   ||||||||||||||||||||||| |||||    
T  6269421 agagagaaagttgtcacaaaaattgttataaaatggttgtacaaatatcatttatcaat 6269363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 19426634 - 19426580
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| |||| || |  | ||||||||||||||||||||||||||    
T  19426634 agagagaaagttgtcaaaaagttgtcacaaaatggttgtacaaatatcatttctc 19426580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 25940657 - 25940703
Alignment:
Q  20 agttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||| ||||||| || | ||||||||||||||||||||||||||    
T  25940657 agttgtctaaaaattgttacaaaatggttgtacaaatatcatttctc 25940703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 40077308 - 40077254
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| ||||||| || | |||| ||||||||||||| |||||||    
T  40077308 agagagaaagttgtctaaaaattgttacaaaatagttgtacaaatataatttctc 40077254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 17039211 - 17039158
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttct 65  Q
    |||||||||||||| ||||||||||    |||| ||||||||||||||||||||    
T  17039211 agagagaaagttgtacaaaaattatacaaaaatagttgtacaaatatcatttct 17039158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 35212972 - 35213025
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttct 65  Q
    |||||||||||||| |||||||| | || ||||  |||||||||||||||||||    
T  35212972 agagagaaagttgtacaaaaattgtagcaaaataattgtacaaatatcatttct 35213025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 37969985 - 37969928
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaat 69  Q
    |||||||||||||| ||||| || |  | |||| ||||||||||||||||||||||||    
T  37969985 agagagaaagttgtacaaaagttgtatcaaaatagttgtacaaatatcatttctcaat 37969928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 69
Target Start/End: Complemental strand, 6353750 - 6353722
Alignment:
Q  41 aaatggttgtacaaatatcatttctcaat 69  Q
    |||||||||||||||||||||||||||||    
T  6353750 aaatggttgtacaaatatcatttctcaat 6353722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 7295505 - 7295449
Alignment:
Q  12 agagagaaagttgt-ccaaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    |||||||||||||| ||||||||| |    |||||||||||||||||||||||||||    
T  7295505 agagagaaagttgttccaaaaattgtactaaaatggttgtacaaatatcatttctca 7295449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 11070280 - 11070228
Alignment:
Q  14 agagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||| ||||| ||||    ||||||||||||||||||||||||||    
T  11070280 agagaaagttgtacaaaagttatactaaaatggttgtacaaatatcatttctc 11070228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 69
Target Start/End: Original strand, 11789737 - 11789765
Alignment:
Q  41 aaatggttgtacaaatatcatttctcaat 69  Q
    |||||||||||||||||||||||||||||    
T  11789737 aaatggttgtacaaatatcatttctcaat 11789765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 21153100 - 21153052
Alignment:
Q  16 agaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttc 64  Q
    ||||||||||| ||||||||||   ||||| ||||||||||||||||||    
T  21153100 agaaagttgtcaaaaaattattagaaaatgattgtacaaatatcatttc 21153052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 23845016 - 23844964
Alignment:
Q  15 gagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    |||||| |||||  ||||||||| | |||| ||||||||||||||||||||||    
T  23845016 gagaaaattgtcacaaaattattacaaaattgttgtacaaatatcatttctca 23844964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 27125570 - 27125626
Alignment:
Q  13 gagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaat 69  Q
    |||||| ||||||| |||||||||| | |||| |||||| ||||||||||| |||||    
T  27125570 gagagagagttgtctaaaaattattacaaaatagttgtagaaatatcatttatcaat 27125626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 30538680 - 30538624
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaa 68  Q
    |||||||||||||| ||||| || |  | |||| |||||||||||||||||||||||    
T  30538680 agagagaaagttgtacaaaagttgtaccaaaattgttgtacaaatatcatttctcaa 30538624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 41458917 - 41458973
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaa 68  Q
    |||||||||||||| |||||||| |    |||||||||||||||||| |||||||||    
T  41458917 agagagaaagttgtacaaaaattgtactaaaatggttgtacaaatattatttctcaa 41458973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 64
Target Start/End: Complemental strand, 41890581 - 41890529
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttc 64  Q
    ||||||||| ||||| ||||||| |||| |||| | |||||||||||||||||    
T  41890581 agagagaaaattgtcaaaaaattgttgcaaaattgatgtacaaatatcatttc 41890529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 42118715 - 42118766
Alignment:
Q  15 gagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    |||| ||||||||||||||| |  | |||||||||||||||||||||||||||    
T  42118715 gagagagttgtccaaaaattgtcac-aaatggttgtacaaatatcatttctca 42118766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 44175599 - 44175543
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaa 68  Q
    |||||||||||||| ||||| ||||  | ||||| |||||||||||| |||||||||    
T  44175599 agagagaaagttgtacaaaagttatcacaaaatgattgtacaaatattatttctcaa 44175543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 6e-18; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 43056770 - 43056720
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatt 62  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  43056770 agagagaaagttgtccaaaaattattgcaaaatggttgtacaaatatcatt 43056720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 49621417 - 49621360
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaat 69  Q
    ||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||    
T  49621417 agagagaaagttgtctaaaaattattacaaaatggttgtacaaatatcatttctcaat 49621360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 3919354 - 3919298
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaa 68  Q
    |||||||||||||||||||||||||  | ||||||||||||||||||||||||||||    
T  3919354 agagagaaagttgtccaaaaattataacaaaatggttgtacaaatatcatttctcaa 3919298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 47113328 - 47113277
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcattt 63  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  47113328 agagagaaagttgtccaaaaattattgcaaaatgattgtacaaatatcattt 47113277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 26501349 - 26501295
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||||||||||| ||||| | ||||||||||||||||||||||||||    
T  26501349 agagagaaagttgtccaaaagttattacaaaatggttgtacaaatatcatttctc 26501295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 43457836 - 43457890
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||||||||||| |||| || ||||||||||||||||||||||||||    
T  43457836 agagagaaagttgtccaaaagttatcgcaaaatggttgtacaaatatcatttctc 43457890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 7203861 - 7203915
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| ||||||| |||| |||||||| |||||||||||||||||    
T  7203861 agagagaaagttgtctaaaaattgttgcaaaatggttatacaaatatcatttctc 7203915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 27352684 - 27352630
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||||||||||| ||||  | ||||||||||||||||||||||||||    
T  27352684 agagagaaagttgtccaaaagttatcacaaaatggttgtacaaatatcatttctc 27352630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 39128464 - 39128410
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||||||||||||||||||| ||||  |||||||||||| |||||||    
T  39128464 agagagaaagttgtccaaaaattattgcaaaataattgtacaaatataatttctc 39128410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 46281491 - 46281435
Alignment:
Q  12 agagagaaagttgtc-caaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    ||||||||||||||| ||||||||||| | |||| ||||||||||||||||||||||    
T  46281491 agagagaaagttgtcacaaaaattattacaaaatagttgtacaaatatcatttctca 46281435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 1156533 - 1156479
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| |||||||||||| |||||  ||||||||||| |||||||    
T  1156533 agagagaaagttgtcaaaaaattattgcaaaatgaatgtacaaatataatttctc 1156479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 2827727 - 2827781
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||||| ||||||||||  |||| || ||||||||||||||||||||    
T  2827727 agagagaaagttgtacaaaaattataccgaattgattgtacaaatatcatttctc 2827781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 27563538 - 27563484
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||| ||||| ||||||||| || ||||| ||||||||||||||||||||    
T  27563538 agagagaaaattgtcaaaaaattatagcaaaatgattgtacaaatatcatttctc 27563484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 39815400 - 39815346
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||||||||||| || | || |||||||||||||||||| |||||||    
T  39815400 agagagaaagttgtccaaaagttgtagcaaaatggttgtacaaatataatttctc 39815346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 51193148 - 51193202
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||||||||||| ||   |||||| |||||||||||||||||||    
T  51193148 agagagaaagttgtccaaaaattgttataaaatggatgtacaaatatcatttctc 51193202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 11038314 - 11038262
Alignment:
Q  14 agagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||| ||||||||||  | ||||||||||| ||||||||||||||    
T  11038314 agagaaagttgtacaaaaattataccaaaatggttgtataaatatcatttctc 11038262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 21433417 - 21433472
Alignment:
Q  12 agagagaaagttgtc-caaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| ||||| || || | ||||||||||||||||||||||||||    
T  21433417 agagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcatttctc 21433472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 12999839 - 12999893
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||||| ||||| || ||   ||||||||||||||||||||||||||    
T  12999839 agagagaaagttgtacaaaagttgttagaaaatggttgtacaaatatcatttctc 12999893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 18541068 - 18541122
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| |||| || ||   ||||||||||||||||||||||||||    
T  18541068 agagagaaagttgtcaaaaagttgttagaaaatggttgtacaaatatcatttctc 18541122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 29489376 - 29489430
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||||| | ||| ||||  | ||||||||||||||||||||||||||    
T  29489376 agagagaaagttgtaccaaagttatcacaaaatggttgtacaaatatcatttctc 29489430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 40605438 - 40605492
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| |||||||||    ||| ||||||||||||||||||||||    
T  40605438 agagagaaagttgtctaaaaattatcaaaaaaaggttgtacaaatatcatttctc 40605492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 42615908 - 42615858
Alignment:
Q  18 aaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaa 68  Q
    ||||||||| ||||||||||   ||||| ||||||||||||||||||||||    
T  42615908 aaagttgtcaaaaaattattaaaaaatgattgtacaaatatcatttctcaa 42615858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 49189229 - 49189279
Alignment:
Q  16 agaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||| |||| || | || ||||||||||||||||||||||||||    
T  49189229 agaaagttgtcaaaaagttgtagcaaaatggttgtacaaatatcatttctc 49189279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 49596289 - 49596235
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| ||||||| |    ||||||||||||||||||||||||||    
T  49596289 agagagaaagttgtcaaaaaattgtaataaaatggttgtacaaatatcatttctc 49596235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 50777440 - 50777494
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||| |||||||||| | ||  ||||||||||||||||||| |||||    
T  50777440 agagagaaagttatccaaaaattgtcgcataatggttgtacaaatatcacttctc 50777494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 9445160 - 9445107
Alignment:
Q  14 agagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    ||||||||||||| |||| || || | |||||||||||| ||||||||||||||    
T  9445160 agagaaagttgtcaaaaagttgttacaaaatggttgtacgaatatcatttctca 9445107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 32196692 - 32196647
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaata 57  Q
    ||||||||| ||||| |||||||||||| ||| |||||||||||||    
T  32196692 agagagaaaattgtcaaaaaattattgcaaaagggttgtacaaata 32196647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 34157856 - 34157803
Alignment:
Q  16 agaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaat 69  Q
    |||||||||||||||||||||  | ||||  || ||||||||||||||||||||    
T  34157856 agaaagttgtccaaaaattatcacaaaataattatacaaatatcatttctcaat 34157803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 36231723 - 36231776
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttct 65  Q
    ||||||||||||||| ||| ||| |  | |||||||||||||||||||||||||    
T  36231723 agagagaaagttgtctaaatattgtcacaaaatggttgtacaaatatcatttct 36231776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 39669855 - 39669806
Alignment:
Q  17 gaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||| ||||||| |  | ||||||||||||||||||||||||||    
T  39669855 gaaagttgtcaaaaaattgtcacaaaatggttgtacaaatatcatttctc 39669806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 1100269 - 1100217
Alignment:
Q  14 agagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||| |||||||| |    ||||||||||||||||||||||||||    
T  1100269 agagaaagttgtacaaaaattgtacaaaaatggttgtacaaatatcatttctc 1100217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 30505353 - 30505409
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaa 68  Q
    ||||||||| ||||| ||||||| ||   || |||||||||||||||||||||||||    
T  30505353 agagagaaatttgtcaaaaaattgttagaaattggttgtacaaatatcatttctcaa 30505409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 43755697 - 43755749
Alignment:
Q  14 agagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||| ||||| |||||||||    ||||||||||||||||||||||||||    
T  43755697 agagaaaattgtcaaaaaattatcataaaatggttgtacaaatatcatttctc 43755749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 49570051 - 49569995
Alignment:
Q  12 agagagaaagttgtc-caaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    ||||||||||||||| ||||| || ||  ||||||| ||||||||||||||||||||    
T  49570051 agagagaaagttgtcacaaaagttgttaggaaatggatgtacaaatatcatttctca 49569995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 36786275 - 36786325
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatt 62  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  36786275 agagagaaagttgtccaaaaattattgcaaaatggttggacaaatatcatt 36786325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 2050980 - 2050927
Alignment:
Q  13 gagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||| ||||||||||||||||| || | ||||||||||||||||||||||||||    
T  2050980 gagataaagttgtccaaaaattgttacaaaatggttgtacaaatatcatttctc 2050927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 36581482 - 36581538
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaa 68  Q
    ||||||||||||||| |||||||||  | || |||||||||||||||||||||||||    
T  36581482 agagagaaagttgtctaaaaattatcacaaagtggttgtacaaatatcatttctcaa 36581538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 6940166 - 6940221
Alignment:
Q  12 agagagaaagttgtc-caaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| |||||||||||   ||||||||||||||||||||||||||    
T  6940166 agagagaaagttgtcacaaaaattattataaaatggttgtacaaatatcatttctc 6940221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 22920509 - 22920564
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    |||||||||||||||||||| || || | |||||||||||||||||| ||||||||    
T  22920509 agagagaaagttgtccaaaatttgttacaaaatggttgtacaaatattatttctca 22920564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 20985546 - 20985600
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||||| ||||||||||    ||||||||||||||||||||||||||    
T  20985546 agagagaaagttgtacaaaaattatacaaaaatggttgtacaaatatcatttctc 20985600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 36416080 - 36416134
Alignment:
Q  13 gagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    |||||||||||||| ||||||| ||   |||||||||||||||||||||||||||    
T  36416080 gagagaaagttgtcaaaaaattgttagaaaatggttgtacaaatatcatttctca 36416134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 41192641 - 41192587
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| ||||||| | || |||| |||||||||||||||||||||    
T  41192641 agagagaaagttgtcaaaaaattgtagcaaaatagttgtacaaatatcatttctc 41192587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 14914424 - 14914372
Alignment:
Q  14 agagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||||||||| || |  | ||||||||||||||||||||||||||    
T  14914424 agagaaagttgtccaaaagttgtcacaaaatggttgtacaaatatcatttctc 14914372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 16690552 - 16690496
Alignment:
Q  14 agagaaagttgtc-caaaaattattgcgaaatggttgtacaaatatcatttctcaat 69  Q
    ||||||||||||| ||||| || ||  ||||||||||||||||||||||||||||||    
T  16690552 agagaaagttgtcacaaaagttgttaagaaatggttgtacaaatatcatttctcaat 16690496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 31708424 - 31708368
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaa 68  Q
    ||||||||||||||| |||| || ||   ||||||||||||||||||||||||||||    
T  31708424 agagagaaagttgtcaaaaagttgttataaaatggttgtacaaatatcatttctcaa 31708368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 38500995 - 38500943
Alignment:
Q  14 agagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||| ||||||| |  | ||||||||||||||||||||||||||    
T  38500995 agagaaagttgtcaaaaaattgtcacaaaatggttgtacaaatatcatttctc 38500943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 39788723 - 39788779
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaa 68  Q
    |||||||||||||||||||| || |  |  |||||||||||||||||||||||||||    
T  39788723 agagagaaagttgtccaaaagttgtcacataatggttgtacaaatatcatttctcaa 39788779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 18695373 - 18695318
Alignment:
Q  12 agagagaaagttgtc-caaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| ||||| || || | ||||||||||||||||||||||||||    
T  18695373 agagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcatttctc 18695318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 8726401 - 8726455
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||| |||||||| ||||||||||||| |||||||| || |||||| |||||||    
T  8726401 agagaaaaagttgtacaaaaattattgcaaaatggttatataaatataatttctc 8726455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 19271913 - 19271859
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| |||  || || | ||||||||||||||||||||||||||    
T  19271913 agagagaaagttgtctaaacgttgttacaaaatggttgtacaaatatcatttctc 19271859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 29402232 - 29402182
Alignment:
Q  16 agaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||| |||||||||| | || || ||||||||||||||||||||    
T  29402232 agaaagttgtcaaaaaattattacaaagtgattgtacaaatatcatttctc 29402182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 6538922 - 6538869
Alignment:
Q  14 agagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    ||||||||||||| |||||||||  | ||||  |||||||||||||||||||||    
T  6538922 agagaaagttgtcaaaaaattatcacaaaataattgtacaaatatcatttctca 6538869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 12661964 - 12662021
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaat 69  Q
    ||||||||||||||| ||||||| |  | || ||| ||||||||||||||||||||||    
T  12661964 agagagaaagttgtcaaaaaattgtcacaaagtggatgtacaaatatcatttctcaat 12662021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 9599745 - 9599801
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaa 68  Q
    |||||||||||||| ||||| || |  | || |||||||||||||||||||||||||    
T  9599745 agagagaaagttgtacaaaagttgtcacaaattggttgtacaaatatcatttctcaa 9599801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 15639439 - 15639383
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaa 68  Q
    ||||| ||||||||| |||| || |  | ||||||||||||||||||||||||||||    
T  15639439 agagaaaaagttgtctaaaagttgtcaccaaatggttgtacaaatatcatttctcaa 15639383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 22098310 - 22098254
Alignment:
Q  12 agagagaaagttgtc-caaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    ||||||||||||||| ||||| || ||   |||||||||||||||||||||||||||    
T  22098310 agagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcatttctca 22098254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 31006113 - 31006057
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaa 68  Q
    ||||||||||||||| |||| || | || |||| || ||||||||||||||||||||    
T  31006113 agagagaaagttgtcaaaaagttttagcaaaatagtcgtacaaatatcatttctcaa 31006057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 31626099 - 31626147
Alignment:
Q  18 aaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||| ||||||||||  | ||||| ||||||||||||||||||||    
T  31626099 aaagttgtacaaaaattataccaaaatgattgtacaaatatcatttctc 31626147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 34381066 - 34381010
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaa 68  Q
    ||||||||||||||| |||| || |  | || |||||||||||||||||||||||||    
T  34381066 agagagaaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctcaa 34381010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 38293377 - 38293433
Alignment:
Q  14 agagaaagttgtc-caaaaattattgcgaaatggttgtacaaatatcatttctcaat 69  Q
    ||||||||||||| |||||||| ||   ||||||||||| |||||||||||||||||    
T  38293377 agagaaagttgtcacaaaaattgttataaaatggttgtaaaaatatcatttctcaat 38293433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 40829453 - 40829413
Alignment:
Q  27 caaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    |||||||||||   |||||||||||||||||||||||||||    
T  40829453 caaaaattattaaaaaatggttgtacaaatatcatttctca 40829413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 11114686 - 11114743
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaat 69  Q
    ||||||||||||||| |||| ||||||| |||||| ||||||||||||||||||||||    
T  11114686 agagagaaagttgtcaaaaagttattgcaaaatggatgtacaaatatcatttctcaat 11114743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 14548840 - 14548897
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaat 69  Q
    ||||||||||||||| ||||||||||   |||||||||||||||||||||||||||||    
T  14548840 agagagaaagttgtctaaaaattattaaaaaatggttgtacaaatatcatttctcaat 14548897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 35937529 - 35937584
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    |||||||||||||||||||| || || | |||||||||||||||||||||||||||    
T  35937529 agagagaaagttgtccaaaagttgttacaaaatggttgtacaaatatcatttctca 35937584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 38504224 - 38504170
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| ||||||| | || ||||||||||||||||||||||||||    
T  38504224 agagagaaagttgtcaaaaaattgtagcaaaatggttgtacaaatatcatttctc 38504170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 10344378 - 10344321
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaat 69  Q
    ||||||||||||||||||||||||||   |||| | ||||||||||||||||||||||    
T  10344378 agagagaaagttgtccaaaaattattataaaatagatgtacaaatatcatttctcaat 10344321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 31806353 - 31806297
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaa 68  Q
    ||||||||||||||| ||||||| ||   ||||||||||||||||||||||||||||    
T  31806353 agagagaaagttgtcaaaaaattgttagaaaatggttgtacaaatatcatttctcaa 31806297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 20473831 - 20473776
Alignment:
Q  14 agagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaat 69  Q
    ||||||||||||| ||||||| ||   |||||||||||||||||||||||||||||    
T  20473831 agagaaagttgtcaaaaaattgttataaaatggttgtacaaatatcatttctcaat 20473776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 29509320 - 29509265
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    ||||||||||||||| |||| || | || |||||||||||||||||||||||||||    
T  29509320 agagagaaagttgtcaaaaagttgtagcaaaatggttgtacaaatatcatttctca 29509265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 3650167 - 3650113
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||  |||||||||| | || |||||||||||||||||||||||    
T  3650167 agagagaaagttgttaaaaaattattacaaattggttgtacaaatatcatttctc 3650113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 28156257 - 28156203
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||||| |||||||| |  | ||||||||||||||||||||||||||    
T  28156257 agagagaaagttgtacaaaaattgtaccaaaatggttgtacaaatatcatttctc 28156203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 32674249 - 32674303
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||||| ||||| ||||  | ||||||||||||||||||||||||||    
T  32674249 agagagaaagttgtacaaaagttataccaaaatggttgtacaaatatcatttctc 32674303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 3775896 - 3775943
Alignment:
Q  20 agttgtccaaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    ||||||| |||||||||| | ||||||||||||||||||| |||||||    
T  3775896 agttgtcaaaaaattattacaaaatggttgtacaaatatcctttctca 3775943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 6849488 - 6849539
Alignment:
Q  15 gagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||| | ||||| |||| || |||||||||||||||||||||||    
T  6849488 gagaaagttgtcaacaaattgttgcaaattggttgtacaaatatcatttctc 6849539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 10644818 - 10644873
Alignment:
Q  12 agagagaaagttgtc-caaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| ||||| || || | ||||||||||||||||||||||||||    
T  10644818 agagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcatttctc 10644873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 11089630 - 11089579
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcattt 63  Q
    ||||| ||||||||| ||||||||| |  |||||||||||||||||||||||    
T  11089630 agagaaaaagttgtcaaaaaattatagtaaaatggttgtacaaatatcattt 11089579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 35067215 - 35067160
Alignment:
Q  12 agagagaaagttgtc-caaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| ||||| || ||  |||||||||||||||||||||||||||    
T  35067215 agagagaaagttgtcacaaaagttgttaagaaatggttgtacaaatatcatttctc 35067160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 37343429 - 37343374
Alignment:
Q  11 cagagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||| ||||||||||||  |  ||| |||||||||||||||||||||    
T  37343429 cagagagaaagttatccaaaaattatcacataatagttgtacaaatatcatttctc 37343374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 38675658 - 38675603
Alignment:
Q  12 agagagaaagttgtcc-aaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||||||  ||||||||| |  ||||||||||||||||||||||||||    
T  38675658 agagagaaagttgtcataaaaattatagaaaaatggttgtacaaatatcatttctc 38675603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 42131050 - 42130999
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcattt 63  Q
    |||||||||||||||||||| || ||||  |||||||||| |||||||||||    
T  42131050 agagagaaagttgtccaaaagttgttgcagaatggttgtataaatatcattt 42130999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 1158352 - 1158406
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||||| ||||| |||||   || |||||||||||||||||||||||    
T  1158352 agagagaaagttgttcaaaagttattagaaattggttgtacaaatatcatttctc 1158406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 8888306 - 8888252
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||||||  ||| || |||| ||||||| ||||||||||||||||||    
T  8888306 agagagaaagttgtctgaaagttgttgcaaaatggtcgtacaaatatcatttctc 8888252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 12045670 - 12045724
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| |||| || |  | ||||||||||||||||||||||||||    
T  12045670 agagagaaagttgtctaaaagttgtcactaaatggttgtacaaatatcatttctc 12045724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 16699585 - 16699639
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||||||  ||| || || | ||||||||||||||||||||||||||    
T  16699585 agagagaaagttgtctcaaagttgttaccaaatggttgtacaaatatcatttctc 16699639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 20852969 - 20852919
Alignment:
Q  16 agaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||| |||||||||    ||||||||||||||||||||||||||    
T  20852969 agaaagttgtctaaaaattatcataaaatggttgtacaaatatcatttctc 20852919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 25830262 - 25830320
Alignment:
Q  12 agagagaaagttgtc-caaaaattattgcgaaatggttgtacaaatatcatttctcaat 69  Q
    ||||||||||||||| ||||| || ||   |||||||||||||||||||||||||||||    
T  25830262 agagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcatttctcaat 25830320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 30927948 - 30928002
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||||| |||||||| |  | || |||||||||||||||||||||||    
T  30927948 agagagaaagttgtacaaaaattgtcacaaattggttgtacaaatatcatttctc 30928002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 34641599 - 34641545
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||||  ||||||||||    ||||||||||||||||||||||||||    
T  34641599 agagagaaagttgcacaaaaattatataaaaatggttgtacaaatatcatttctc 34641545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 35818991 - 35818937
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| ||||||| ||   |||||||||| |||||||||||||||    
T  35818991 agagagaaagttgtcaaaaaattgttagaaaatggttgtgcaaatatcatttctc 35818937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 36740368 - 36740314
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||| |||||||||| |||||||||  | ||||| ||||||||||||||||||||    
T  36740368 agagggaaagttgtctaaaaattatcactaaatgattgtacaaatatcatttctc 36740314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 37784391 - 37784445
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||| |||| ||||| ||||  | ||||||||||||||||||||||||||    
T  37784391 agagagaaaattgtacaaaagttataccaaaatggttgtacaaatatcatttctc 37784445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 42716374 - 42716320
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| |||||||||    || |||||||||||||||||||||||    
T  42716374 agagagaaagttgtcaaaaaattatgaaaaagtggttgtacaaatatcatttctc 42716320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 28623130 - 28623183
Alignment:
Q  14 agagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    ||||||||||||| |||| ||||  |  ||||||||||||||||||||||||||    
T  28623130 agagaaagttgtcaaaaagttatcacataatggttgtacaaatatcatttctca 28623183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 43873710 - 43873763
Alignment:
Q  14 agagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    ||||| ||||||| ||||||| |  | |||||||||||||||||||||||||||    
T  43873710 agagagagttgtcaaaaaattgtcacaaaatggttgtacaaatatcatttctca 43873763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 1332487 - 1332539
Alignment:
Q  14 agagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||| ||||||| ||   |||||||||||||| |||||||||||    
T  1332487 agagaaagttgtcaaaaaattgttataaaatggttgtacaattatcatttctc 1332539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 7129586 - 7129530
Alignment:
Q  13 gagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaat 69  Q
    ||||||||||||||||||| || |  | |||||||||||||||||| |||| |||||    
T  7129586 gagagaaagttgtccaaaagttgtcacaaaatggttgtacaaatattatttatcaat 7129530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 69
Target Start/End: Complemental strand, 22767157 - 22767129
Alignment:
Q  41 aaatggttgtacaaatatcatttctcaat 69  Q
    |||||||||||||||||||||||||||||    
T  22767157 aaatggttgtacaaatatcatttctcaat 22767129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 35345459 - 35345423
Alignment:
Q  27 caaaaattattgcgaaatggttgtacaaatatcattt 63  Q
    ||||||||||| | |||||||||||||||||||||||    
T  35345459 caaaaattattacaaaatggttgtacaaatatcattt 35345423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 77
Target Start/End: Complemental strand, 36675361 - 36675325
Alignment:
Q  41 aaatggttgtacaaatatcatttctcaatgcttaatg 77  Q
    |||||||||||||||||||||||||||| || |||||    
T  36675361 aaatggttgtacaaatatcatttctcaaagcataatg 36675325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 39021462 - 39021514
Alignment:
Q  14 agagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||| ||||||| |||| ||||  | ||||||||||||||||||||||||||    
T  39021462 agagagagttgtcaaaaagttatcacaaaatggttgtacaaatatcatttctc 39021514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 42786676 - 42786732
Alignment:
Q  12 agagagaaagttgtc-caaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    ||||||||||||||| |||||||| |    |||||||||||||||||||||||||||    
T  42786676 agagagaaagttgtcacaaaaattgtaagaaaatggttgtacaaatatcatttctca 42786732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 64
Target Start/End: Complemental strand, 43186350 - 43186298
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttc 64  Q
    |||||||||||||| ||||||||||  | ||||  ||||||||||||||||||    
T  43186350 agagagaaagttgtacaaaaattatcacaaaataattgtacaaatatcatttc 43186298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 43602442 - 43602494
Alignment:
Q  14 agagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||| |||||||| |||| || | || ||||||||||||||||||||||||||    
T  43602442 agagcaagttgtcaaaaagttgtagcaaaatggttgtacaaatatcatttctc 43602494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 16743283 - 16743338
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    ||||||||||||||| ||||||||||   |||||||||||||||||||||||||||    
T  16743283 agagagaaagttgtctaaaaattattaaaaaatggttgtacaaatatcatttctca 16743338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 25924881 - 25924936
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    ||||||||||||||| |||| || | || |||||||||||||||||||||||||||    
T  25924881 agagagaaagttgtcaaaaagttgtagcaaaatggttgtacaaatatcatttctca 25924936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 25995496 - 25995439
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaat 69  Q
    |||||||||||||| ||||||||    | |||||||||||||||||||||||||||||    
T  25995496 agagagaaagttgtacaaaaattgccacaaaatggttgtacaaatatcatttctcaat 25995439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 28883765 - 28883822
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaat 69  Q
    ||||||||||||||| |||  |||||   |||||||||||||||||||||||||||||    
T  28883765 agagagaaagttgtcaaaaggttattaaaaaatggttgtacaaatatcatttctcaat 28883822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 27102169 - 27102113
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaa 68  Q
    ||||| ||| ||||| ||||||||||   ||||||||||||||||||||||||||||    
T  27102169 agagaaaaaattgtcaaaaaattattagaaaatggttgtacaaatatcatttctcaa 27102113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 27143991 - 27143935
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaa 68  Q
    ||||| ||| ||||| ||||||||||   ||||||||||||||||||||||||||||    
T  27143991 agagaaaaaattgtcaaaaaattattagaaaatggttgtacaaatatcatttctcaa 27143935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 34570611 - 34570663
Alignment:
Q  12 agagagaaagttgtc-caaaaattattgcgaaatggttgtacaaatatcattt 63  Q
    ||||||||||||||| ||||| ||||| | |||||||||||||||||||||||    
T  34570611 agagagaaagttgtcacaaaagttattacaaaatggttgtacaaatatcattt 34570663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 3339516 - 3339570
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||||| ||||| || |  | ||||||||||||||||||||||||||    
T  3339516 agagagaaagttgtacaaaagttgtcacaaaatggttgtacaaatatcatttctc 3339570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 11785405 - 11785355
Alignment:
Q  16 agaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||| ||||||| |  | ||||||||||||||||||||||||||    
T  11785405 agaaagttgtcaaaaaattgtcacaaaatggttgtacaaatatcatttctc 11785355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 15364712 - 15364658
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||| ||||||||  ||||||| | || ||||||||||||||||||||||||||    
T  15364712 agagacaaagttgttaaaaaattgtagcaaaatggttgtacaaatatcatttctc 15364658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 17417252 - 17417306
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||||||||||| |  |  |||| ||||||||||||||||||||    
T  17417252 agagagaaagttgtccaaaaattgtcacataatgattgtacaaatatcatttctc 17417306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 26668550 - 26668496
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||| || || ||||||||| || ||||| ||||||||||||||||||||    
T  26668550 agagagaaaattatcaaaaaattatagcaaaatgattgtacaaatatcatttctc 26668496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 28965857 - 28965911
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| |||| || |  | ||||||||||||||||||||||||||    
T  28965857 agagagaaagttgtcaaaaagttgtaacaaaatggttgtacaaatatcatttctc 28965911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 34413142 - 34413092
Alignment:
Q  16 agaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||| ||||||| | || ||||| ||||||||||||||||||||    
T  34413142 agaaagttgtcaaaaaattgtagcaaaatgattgtacaaatatcatttctc 34413092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 6997567 - 6997624
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaat 69  Q
    |||||| |||| || ||||||||||    |||||||||||||||||||||||||||||    
T  6997567 agagaggaagtagtacaaaaattatacaaaaatggttgtacaaatatcatttctcaat 6997624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 8778890 - 8778943
Alignment:
Q  13 gagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||||| |||| || ||   ||||||||||||||||||||||||||    
T  8778890 gagagaaagttgtcaaaaagttgttaaaaaatggttgtacaaatatcatttctc 8778943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 25554299 - 25554242
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaat 69  Q
    ||||||||||||||  |||||||    | |||||||||||||||||||||||||||||    
T  25554299 agagagaaagttgtaaaaaaattgccacaaaatggttgtacaaatatcatttctcaat 25554242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 26094959 - 26094902
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaat 69  Q
    ||||| |||||||| ||||||||    | |||||||||||||||||||||||||||||    
T  26094959 agagataaagttgtacaaaaattgccacaaaatggttgtacaaatatcatttctcaat 26094902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 25127848 - 25127904
Alignment:
Q  11 cagagagaaagttgtc-caaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||| || ||||| || || | ||||||||||||||||||||||||||    
T  25127848 cagagagaaagttttcacaaaagttgttacaaaatggttgtacaaatatcatttctc 25127904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 6328721 - 6328666
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    |||||||||||||| ||||||||||  | |||||||||||||||||||||||||||    
T  6328721 agagagaaagttgtacaaaaattataccaaaatggttgtacaaatatcatttctca 6328666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 9695078 - 9695133
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    |||||||||||||||||||||||||  |  ||||||||||||||||||||||||||    
T  9695078 agagagaaagttgtccaaaaattatctcataatggttgtacaaatatcatttctca 9695133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 44484673 - 44484727
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||||| |||||||| || | ||||||||||||||||||||||||||    
T  44484673 agagagaaagttgtacaaaaattgttacaaaatggttgtacaaatatcatttctc 44484727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 33559691 - 33559638
Alignment:
Q  14 agagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    |||||||||||||||||||||||    |||||||||||||||||||||||||||    
T  33559691 agagaaagttgtccaaaaattatactaaaatggttgtacaaatatcatttctca 33559638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 34373059 - 34373006
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttct 65  Q
    |||||||||||||| ||||||||||  | |||||||||||||||||||||||||    
T  34373059 agagagaaagttgtacaaaaattataccaaaatggttgtacaaatatcatttct 34373006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 12784415 - 12784471
Alignment:
Q  12 agagagaaagttgtc-caaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    ||||||||||||||| |||||||||||   |||||||||||||||||||||||||||    
T  12784415 agagagaaagttgtcacaaaaattattataaaatggttgtacaaatatcatttctca 12784471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 1298248 - 1298194
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||| ||||| ||||||||| || |||||||| |||||||||||||||||    
T  1298248 agagagaaaattgtcaaaaaattatagcaaaatggttctacaaatatcatttctc 1298194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 5954500 - 5954554
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||||||||||| ||||  |  |||||||||||||||||||||||||    
T  5954500 agagagaaagttgtccaaaagttatcacataatggttgtacaaatatcatttctc 5954554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 11442726 - 11442672
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| ||||||| |   |||||||||||||||||||||||||||    
T  11442726 agagagaaagttgtcaaaaaattgtaatgaaatggttgtacaaatatcatttctc 11442672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 13553201 - 13553147
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||| |||||||||||||||  | || |||||||||||||||||||||||    
T  13553201 agagagaaaattgtccaaaaattatcacaaagtggttgtacaaatatcatttctc 13553147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 36909861 - 36909914
Alignment:
Q  13 gagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||||||| || |  | ||||||||||||||||||||||||||    
T  36909861 gagagaaagttgtccaaaagttgtcacaaaatggttgtacaaatatcatttctc 36909914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 25094406 - 25094350
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaa 68  Q
    |||||||||||||| |||||||| |  | |||||||| |||||||||||||||||||    
T  25094406 agagagaaagttgtacaaaaattgtaccaaaatggttatacaaatatcatttctcaa 25094350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 5031978 - 5031923
Alignment:
Q  12 agagagaaagttgtc-caaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| ||||| || || | ||||||||||||||||||||||||||    
T  5031978 agagagaaagttgtcgcaaaagttgttacaaaatggttgtacaaatatcatttctc 5031923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 5095978 - 5096025
Alignment:
Q  20 agttgtccaaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    |||||||||||||||||  | ||||| |||||||||||||||||||||    
T  5095978 agttgtccaaaaattatcacaaaatgattgtacaaatatcatttctca 5096025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 12600102 - 12600047
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    |||||||||||||||  ||||||||  | || ||||||||||||||||||||||||    
T  12600102 agagagaaagttgtcacaaaattatcacaaagtggttgtacaaatatcatttctca 12600047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 13850201 - 13850256
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    |||||||||||||| ||||||||||  | ||||| ||||| |||||||||||||||    
T  13850201 agagagaaagttgtacaaaaattatatcaaaatgattgtataaatatcatttctca 13850256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 18749380 - 18749435
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    |||||||| ||||| ||||||||||    |||||||||||||||||||||||||||    
T  18749380 agagagaaggttgtacaaaaattatacaaaaatggttgtacaaatatcatttctca 18749435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 40599295 - 40599346
Alignment:
Q  13 gagagaaagttgtc-caaaaattattgcgaaatggttgtacaaatatcattt 63  Q
    |||||||||||||| |||||||| ||  ||||||||||||||||||||||||    
T  40599295 gagagaaagttgtcacaaaaattgttaggaaatggttgtacaaatatcattt 40599346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 10288204 - 10288150
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||| ||||||||| |||||||||  | |||| |||||||||||||||||||||    
T  10288204 agagaaaaagttgtctaaaaattatcacaaaatagttgtacaaatatcatttctc 10288150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 15283267 - 15283321
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| ||||||| |  | || |||||||||||||||||||||||    
T  15283267 agagagaaagttgtctaaaaattgtcacaaagtggttgtacaaatatcatttctc 15283321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 18876938 - 18876996
Alignment:
Q  12 agagagaaagttgtc-caaaaattattgcgaaatggttgtacaaatatcatttctcaat 69  Q
    ||||||||||||||| ||||||||||| | |||| | ||| ||||||||||||||||||    
T  18876938 agagagaaagttgtcacaaaaattattaccaaatagatgttcaaatatcatttctcaat 18876996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 30413743 - 30413797
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||| ||||||||| |||| || | || ||||||||||||||||||||||||||    
T  30413743 agagataaagttgtcaaaaagttgtagcaaaatggttgtacaaatatcatttctc 30413797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 31635827 - 31635881
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| |||| || ||   ||||||||||||||||||||||||||    
T  31635827 agagagaaagttgtcaaaaagttgttagaaaatggttgtacaaatatcatttctc 31635881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 33030119 - 33030173
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaat-ggttgtacaaatatcatttct 65  Q
    ||||||||||||||| |||||||||  | |||| |||||||||||||||||||||    
T  33030119 agagagaaagttgtcaaaaaattatcacaaaatgggttgtacaaatatcatttct 33030173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 34144568 - 34144622
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||||| |||||||| |  | || |||||||||||||||||||||||    
T  34144568 agagagaaagttgtacaaaaattgtcacaaattggttgtacaaatatcatttctc 34144622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 35171243 - 35171297
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||||| | |||||| |  | ||||||||||||||||||||||||||    
T  35171243 agagagaaagttgtaccaaaattgtcacaaaatggttgtacaaatatcatttctc 35171297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 39737703 - 39737757
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||||||||||| || ||   || |||||||||||||||||||||||    
T  39737703 agagagaaagttgtccaaaagttgttagaaattggttgtacaaatatcatttctc 39737757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 9384429 - 9384376
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttct 65  Q
    |||||||||||||| ||||||||||    |||| ||||||||||||||||||||    
T  9384429 agagagaaagttgtacaaaaattatgtaaaaatagttgtacaaatatcatttct 9384376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 29192668 - 29192725
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaat 69  Q
    ||||||||| || || ||||||||||   ||||||||||||||||||||||| |||||    
T  29192668 agagagaaaattatcaaaaaattattaaaaaatggttgtacaaatatcatttgtcaat 29192725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 32688561 - 32688618
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaat 69  Q
    ||||||||||||||| ||||||| |    || ||||||||||||||||||||||||||    
T  32688561 agagagaaagttgtcaaaaaattgtcagaaagtggttgtacaaatatcatttctcaat 32688618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 38021406 - 38021353
Alignment:
Q  16 agaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaat 69  Q
    ||||||||||| |||||||||    |||| ||||||||||||||||||||||||    
T  38021406 agaaagttgtcaaaaaattatactaaaatagttgtacaaatatcatttctcaat 38021353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 19631440 - 19631384
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaa 68  Q
    |||||||| |||||| ||||||| || | |||| |||||||||||||||||| ||||    
T  19631440 agagagaatgttgtcaaaaaattgttacaaaatagttgtacaaatatcatttatcaa 19631384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 19637281 - 19637229
Alignment:
Q  14 agagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||| ||||| ||||    ||||||||||||||||||||||||||    
T  19637281 agagaaagttgtacaaaagttatacaaaaatggttgtacaaatatcatttctc 19637229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 19828341 - 19828285
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaa 68  Q
    |||||||| |||||| ||||||| || | |||| |||||||||||||||||| ||||    
T  19828341 agagagaatgttgtcaaaaaattgttacaaaatagttgtacaaatatcatttatcaa 19828285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 19835874 - 19835822
Alignment:
Q  14 agagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||| ||||| ||||    ||||||||||||||||||||||||||    
T  19835874 agagaaagttgtacaaaagttatacaaaaatggttgtacaaatatcatttctc 19835822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 21738648 - 21738688
Alignment:
Q  27 caaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    |||||||||||   |||||||||||||||||||||||||||    
T  21738648 caaaaattattagaaaatggttgtacaaatatcatttctca 21738688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 33857271 - 33857215
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaa 68  Q
    ||||||||||||||| ||||||| ||   ||| | ||||||||||||||||||||||    
T  33857271 agagagaaagttgtcaaaaaattgttagaaaaagattgtacaaatatcatttctcaa 33857215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 40210084 - 40210140
Alignment:
Q  12 agagagaaagttgtc-caaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    ||||||||||||||| |||||||||||   |||| ||||| ||||||||||||||||    
T  40210084 agagagaaagttgtcacaaaaattatttaaaaatagttgttcaaatatcatttctca 40210140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 6239434 - 6239388
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatat 58  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||    
T  6239434 agagagaaagttgtcaaaaaattattgcaaaatggttgtacaaatat 6239388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 33484125 - 33484175
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatt 62  Q
    |||||||||||||||||||||||||  | ||||||||||||||||||||||    
T  33484125 agagagaaagttgtccaaaaattatcacaaaatggttgtacaaatatcatt 33484175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 40721981 - 40722035
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||||||||||||||   |||||| |||||||||||||||||||    
T  40721981 agagagaaagttgtccaaaaattattataaaatggatgtacaaatatcatttctc 40722035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 49768886 - 49768940
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| ||||||| |||| |||||| |||||||||||||||||||    
T  49768886 agagagaaagttgtcaaaaaattgttgcaaaatggatgtacaaatatcatttctc 49768940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 8680995 - 8680938
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaat 69  Q
    ||||||||||||||||||||| |||  |  ||||||||||||||||||||||||||||    
T  8680995 agagagaaagttgtccaaaaaatatcacataatggttgtacaaatatcatttctcaat 8680938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 44170637 - 44170690
Alignment:
Q  13 gagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||||| |||||||||  | ||||||||||||||||||||||||||    
T  44170637 gagagaaagttgtcaaaaaattataacaaaatggttgtacaaatatcatttctc 44170690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 44165963 - 44165907
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaa 68  Q
    ||||||||||||||| ||||||| | || || |||||||||||||||||||||||||    
T  44165963 agagagaaagttgtcaaaaaattgtcgcaaagtggttgtacaaatatcatttctcaa 44165907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 51224855 - 51224911
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaa 68  Q
    ||||||||||||||| |||| || | || ||||||||||||||||||||||||||||    
T  51224855 agagagaaagttgtcaaaaagttgtagcaaaatggttgtacaaatatcatttctcaa 51224911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 45286132 - 45286187
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    |||||||||||||||  ||| || |||| |||||||||||||||||||||||||||    
T  45286132 agagagaaagttgtctgaaagttgttgcaaaatggttgtacaaatatcatttctca 45286187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 47288137 - 47288082
Alignment:
Q  12 agagagaaagttgtc-caaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| |||||||| || | ||||||||||||||||||||||||||    
T  47288137 agagagaaagttgtcacaaaaattgttacaaaatggttgtacaaatatcatttctc 47288082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 9472530 - 9472584
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| ||||||||||   |||| |||||||||||||||||||||    
T  9472530 agagagaaagttgtcaaaaaattattagaaaatagttgtacaaatatcatttctc 9472584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 20056450 - 20056396
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||||||||||||||||  |  ||| |||||||||||||||||||||    
T  20056450 agagagaaagttgtccaaaaattataacataatagttgtacaaatatcatttctc 20056396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 29513713 - 29513767
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| |||| || | || ||||||||||||||||||||||||||    
T  29513713 agagagaaagttgtcaaaaagttgtagcaaaatggttgtacaaatatcatttctc 29513767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 31318807 - 31318753
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||||| |||||||| |  | ||||||||||||||||||||||||||    
T  31318807 agagagaaagttgtacaaaaattgtaccaaaatggttgtacaaatatcatttctc 31318753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 40629357 - 40629411
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||||||||||  ||||| | |||| |||||||||||||||||||||    
T  40629357 agagagaaagttgtccaaaggttattacaaaatagttgtacaaatatcatttctc 40629411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 53662445 - 53662499
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||||| |||||||| || | |||| |||||||||||||||||||||    
T  53662445 agagagaaagttgtacaaaaattgttacaaaatagttgtacaaatatcatttctc 53662499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 56025310 - 56025256
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| |||| || | || ||||||||||||||||||||||||||    
T  56025310 agagagaaagttgtcaaaaagttgtagcaaaatggttgtacaaatatcatttctc 56025256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 28203440 - 28203392
Alignment:
Q  18 aaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||| |||||||||| | ||||| ||||||||||||||||||||    
T  28203440 aaagttgtcaaaaaattattacaaaatgattgtacaaatatcatttctc 28203392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 29863603 - 29863551
Alignment:
Q  14 agagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||| ||||| ||||  | ||||||||||||||||||||||||||    
T  29863603 agagaaagttgtacaaaagttataccaaaatggttgtacaaatatcatttctc 29863551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 36812420 - 36812476
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaa 68  Q
    |||||||||||||||||||| || ||   || |||||||||||||||||||||||||    
T  36812420 agagagaaagttgtccaaaagttgttagaaattggttgtacaaatatcatttctcaa 36812476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 51389368 - 51389316
Alignment:
Q  14 agagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||| ||||||| || | ||||| ||||||||||||||||||||    
T  51389368 agagaaagttgtcaaaaaattgttactaaatgattgtacaaatatcatttctc 51389316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 54251470 - 54251522
Alignment:
Q  15 gagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    |||||||||||| ||||||||||   |||| ||||||||||||||||||||||    
T  54251470 gagaaagttgtcgaaaaattattaaaaaatagttgtacaaatatcatttctca 54251522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 45548807 - 45548854
Alignment:
Q  18 aaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttct 65  Q
    ||||||||| |||||||||  | |||||||||||||||||||||||||    
T  45548807 aaagttgtcaaaaaattatcacaaaatggttgtacaaatatcatttct 45548854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 149304 - 149358
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| ||||||| ||   || |||||||||||||||||||||||    
T  149304 agagagaaagttgtcaaaaaattgttagaaattggttgtacaaatatcatttctc 149358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 1562553 - 1562607
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| |||| || ||   ||||||||||||||||||||||||||    
T  1562553 agagagaaagttgtcaaaaagttgttagaaaatggttgtacaaatatcatttctc 1562607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 1987730 - 1987784
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||||| |||||||| |    ||||||||||||||||||||||||||    
T  1987730 agagagaaagttgtacaaaaattgtactaaaatggttgtacaaatatcatttctc 1987784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 4577611 - 4577557
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||||| |||||||| |    ||||||||||||||||||||||||||    
T  4577611 agagagaaagttgtacaaaaattgtacgaaaatggttgtacaaatatcatttctc 4577557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 5466512 - 5466558
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatat 58  Q
    |||||||||||||||||||||||||||| ||||  ||||||| ||||    
T  5466512 agagagaaagttgtccaaaaattattgcaaaataattgtacatatat 5466558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 12638879 - 12638825
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| ||||||| || | || | |||||||||||||||||||||    
T  12638879 agagagaaagttgtctaaaaattgttacaaagtagttgtacaaatatcatttctc 12638825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 43358667 - 43358613
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||||||||||| || ||   || |||||||||||||||||||||||    
T  43358667 agagagaaagttgtccaaaagttgttagaaattggttgtacaaatatcatttctc 43358613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 47998648 - 47998594
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||| ||||||||| |||| || || | ||||||||||||||||||||||||||    
T  47998648 agagaaaaagttgtcaaaaagttgttacaaaatggttgtacaaatatcatttctc 47998594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 48722123 - 48722069
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||| ||||| |||| || |||| |||||| |||||||||||||||||||    
T  48722123 agagagaaaattgtcaaaaagttgttgcaaaatggatgtacaaatatcatttctc 48722069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 49424837 - 49424891
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| |||| || || | ||| ||||||||||||||||||||||    
T  49424837 agagagaaagttgtcaaaaagttgttacaaaaaggttgtacaaatatcatttctc 49424891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 51107458 - 51107512
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||||| ||||||||||    ||||| ||||||||||||||||||||    
T  51107458 agagagaaagttgtgcaaaaattatacaaaaatgattgtacaaatatcatttctc 51107512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 53763828 - 53763882
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||||||||||| || | || ||||| |||||||||||| |||||||    
T  53763828 agagagaaagttgtccaaaagttgtagcaaaatgattgtacaaatataatttctc 53763882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 54165178 - 54165232
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||| ||||||||| ||||||| | |  ||||||||||||||||||||||||||    
T  54165178 agagaaaaagttgtcaaaaaattgtagtaaaatggttgtacaaatatcatttctc 54165232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 13267496 - 13267549
Alignment:
Q  13 gagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||| ||||||| || |  | ||||||||||||||||||||||||||    
T  13267496 gagagaaagttttccaaaatttgtcacaaaatggttgtacaaatatcatttctc 13267549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 32901381 - 32901328
Alignment:
Q  14 agagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    |||||||||||| ||||||||||    |||| ||||||||||||||||||||||    
T  32901381 agagaaagttgtgcaaaaattatcaaaaaatagttgtacaaatatcatttctca 32901328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 33575076 - 33575117
Alignment:
Q  22 ttgtccaaaaattattgcgaaatggttgtacaaatatcattt 63  Q
    ||||||||||||||| |  |||||||||||||||||||||||    
T  33575076 ttgtccaaaaattatagtaaaatggttgtacaaatatcattt 33575117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 39010154 - 39010211
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaat 69  Q
    |||||||||| |||| |||| || |  | |||||||||||||||||||||||||||||    
T  39010154 agagagaaagctgtcaaaaagttgtcacaaaatggttgtacaaatatcatttctcaat 39010211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 40308493 - 40308444
Alignment:
Q  14 agagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcattt 63  Q
    ||||||||||||| ||||||||||   ||||| |||||||||||||||||    
T  40308493 agagaaagttgtcaaaaaattattataaaatgattgtacaaatatcattt 40308444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 44250246 - 44250299
Alignment:
Q  14 agagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    ||||||||||||| ||||||| || | |||||| | ||||||||||||||||||    
T  44250246 agagaaagttgtcaaaaaattgttacaaaatggatatacaaatatcatttctca 44250299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 46844258 - 46844311
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttct 65  Q
    ||||||||||||||| ||||||| || | |||| |||||||| |||||||||||    
T  46844258 agagagaaagttgtcaaaaaattgttacaaaatagttgtacagatatcatttct 46844311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 1031809 - 1031753
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaa 68  Q
    ||||||||||||||| | || ||||  | || |||||||||||||||||||||||||    
T  1031809 agagagaaagttgtcaagaagttatcacaaagtggttgtacaaatatcatttctcaa 1031753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 3078924 - 3078980
Alignment:
Q  12 agagagaaagttgtc-caaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    ||||||||||||||| ||||| || || | ||||| |||||||||||||||||||||    
T  3078924 agagagaaagttgtcacaaaagttgttacaaaatgattgtacaaatatcatttctca 3078980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 69
Target Start/End: Complemental strand, 3968910 - 3968882
Alignment:
Q  41 aaatggttgtacaaatatcatttctcaat 69  Q
    |||||||||||||||||||||||||||||    
T  3968910 aaatggttgtacaaatatcatttctcaat 3968882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 18568832 - 18568888
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaa 68  Q
    ||||| |||||||||||||| || |  | ||||||||||| ||||||||||||||||    
T  18568832 agagaaaaagttgtccaaaagttgtcacaaaatggttgtataaatatcatttctcaa 18568888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 20956599 - 20956655
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaa 68  Q
    |||||||||||| || ||||||| | |  |||||||||||||||||| |||||||||    
T  20956599 agagagaaagttatcaaaaaattgtagtaaaatggttgtacaaatattatttctcaa 20956655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 23094428 - 23094376
Alignment:
Q  14 agagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||| |||| ||||  | ||||| ||||||||||||||||||||    
T  23094428 agagaaagttgtctaaaagttatcacaaaatgattgtacaaatatcatttctc 23094376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 55996476 - 55996420
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaa 68  Q
    ||||||||| ||||| ||||||| ||   ||||| ||||||||||||||||||||||    
T  55996476 agagagaaaattgtcaaaaaattgttagaaaatgattgtacaaatatcatttctcaa 55996420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 4863 - 4917
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||||| |||||||| |  | ||||||||||||||||||||||||||    
T  4863 agagagaaagttgtacaaaaattgtaccaaaatggttgtacaaatatcatttctc 4917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 27080 - 27134
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| ||| ||| ||  |||||||||||||||||||||||||||    
T  27080 agagagaaagttgtcaaaagattgttaagaaatggttgtacaaatatcatttctc 27134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 72420 - 72366
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||| |||| ||||| || |||| ||||||||||||||||||||||||||    
T  72420 agagagaaaattgttcaaaagttgttgcaaaatggttgtacaaatatcatttctc 72366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 72187 - 72240
Alignment:
Q  13 gagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    |||||||||||||| |||| || || | ||||||||||||||||||||||||||    
T  72187 gagagaaagttgtctaaaagttgttacaaaatggttgtacaaatatcatttctc 72240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 18649 - 18592
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaat 69  Q
    |||||||||||||| ||||| ||||  | || ||||||||||||||||||||||||||    
T  18649 agagagaaagttgtacaaaagttatcacaaattggttgtacaaatatcatttctcaat 18592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0522 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0522
Description:

Target: scaffold0522; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 2521 - 2576
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    |||||||||||||||||||||||||  |  ||| | ||||||||||||||||||||    
T  2521 agagagaaagttgtccaaaaattatcacataatagatgtacaaatatcatttctca 2576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 17029 - 16974
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    ||||||||||||||| |||| || | |  |||||||||||||||||||||||||||    
T  17029 agagagaaagttgtcaaaaagttgtagtaaaatggttgtacaaatatcatttctca 16974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 9483 - 9429
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||| ||||||||  ||||||| | || ||||||||||||||||||||||||||    
T  9483 agagacaaagttgttaaaaaattgtagcaaaatggttgtacaaatatcatttctc 9429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 9829 - 9775
Alignment:
Q  14 agagaaagttgtc-caaaaattattgcgaaatggttgtacaaatatcatttctca 67  Q
    ||||||||||||| ||||||||||    |||||||||||||||||||||||||||    
T  9829 agagaaagttgtcacaaaaattataaaaaaatggttgtacaaatatcatttctca 9775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 2243 - 2297
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||| || || ||||||||| || ||||| ||||||||||||||||||||    
T  2243 agagagaaaattatcaaaaaattatagcaaaatgattgtacaaatatcatttctc 2297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 31316 - 31366
Alignment:
Q  13 gagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcattt 63  Q
    ||||||||||||||||||| || || | |||||||||| ||||||||||||    
T  31316 gagagaaagttgtccaaaagttgttacaaaatggttgtccaaatatcattt 31366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 36056 - 36002
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||||||||| |||||||||  | || | |||||||||||||||||||||    
T  36056 agagagaaagttgtcaaaaaattatcacaaagtagttgtacaaatatcatttctc 36002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 17484 - 17436
Alignment:
Q  18 aaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctc 66  Q
    ||||||||| ||||||| |  | ||||||||||||||||||||||||||    
T  17484 aaagttgtctaaaaattgtgacaaaatggttgtacaaatatcatttctc 17436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 35973 - 36029
Alignment:
Q  15 gagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaatgc 71  Q
    |||| |||||| |||||||| |  ||||||||||||| |||||||||||||| ||||    
T  35973 gagagagttgttcaaaaattgtcacgaaatggttgtataaatatcatttctctatgc 36029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 155960 - 155904
Alignment:
Q  12 agagagaaagttgtccaaaaattattgcgaaatggttgtacaaatatcatttctcaa 68  Q
    ||||||||||||||| |||| || |    ||||||||||||||||||||||||||||    
T  155960 agagagaaagttgtcaaaaagttgtaataaaatggttgtacaaatatcatttctcaa 155904  T

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