View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1174_low_21 (Length: 263)

Name: NF1174_low_21
Description: NF1174
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1174_low_21
NF1174_low_21
[»] chr8 (32 HSPs)
chr8 (119-263)||(40902272-40902416)
chr8 (220-263)||(16454615-16454658)
chr8 (228-263)||(31767061-31767096)
chr8 (229-263)||(7621975-7622009)
chr8 (229-263)||(10989023-10989057)
chr8 (229-263)||(10989230-10989264)
chr8 (229-263)||(18905937-18905971)
chr8 (229-263)||(20760649-20760683)
chr8 (229-263)||(30066063-30066097)
chr8 (229-263)||(32931482-32931516)
chr8 (229-263)||(36997247-36997281)
chr8 (229-263)||(43599392-43599426)
chr8 (229-263)||(43599553-43599587)
chr8 (229-263)||(43984305-43984339)
chr8 (227-263)||(36039781-36039817)
chr8 (229-263)||(3183900-3183934)
chr8 (233-263)||(7729752-7729782)
chr8 (229-263)||(8559662-8559696)
chr8 (229-263)||(15010810-15010844)
chr8 (229-263)||(15011018-15011052)
chr8 (229-263)||(20298505-20298539)
chr8 (229-263)||(21085137-21085171)
chr8 (229-263)||(21653408-21653442)
chr8 (229-263)||(21653885-21653919)
chr8 (229-263)||(22451429-22451463)
chr8 (229-263)||(30065866-30065900)
chr8 (229-263)||(30176453-30176487)
chr8 (229-263)||(33435760-33435794)
chr8 (233-263)||(34248440-34248470)
chr8 (229-263)||(36993936-36993970)
chr8 (235-263)||(34248158-34248186)
chr8 (231-263)||(36037271-36037303)
[»] chr7 (24 HSPs)
chr7 (228-263)||(6783119-6783154)
chr7 (228-263)||(41670914-41670949)
chr7 (229-263)||(1663593-1663627)
chr7 (229-263)||(13310414-13310448)
chr7 (229-263)||(23396690-23396724)
chr7 (229-263)||(23821665-23821699)
chr7 (229-263)||(33855566-33855600)
chr7 (226-263)||(31357660-31357697)
chr7 (231-263)||(257258-257290)
chr7 (231-263)||(40703402-40703434)
chr7 (228-263)||(1661179-1661214)
chr7 (228-263)||(28910113-28910148)
chr7 (228-263)||(28910246-28910281)
chr7 (228-263)||(34590609-34590644)
chr7 (228-263)||(43167881-43167916)
chr7 (229-263)||(6813067-6813101)
chr7 (229-263)||(8585172-8585206)
chr7 (229-263)||(12518159-12518193)
chr7 (229-263)||(12578449-12578483)
chr7 (229-263)||(23396895-23396929)
chr7 (229-263)||(33855772-33855806)
chr7 (229-263)||(40121607-40121641)
chr7 (227-263)||(35866625-35866662)
chr7 (231-263)||(29780228-29780260)
[»] chr6 (34 HSPs)
chr6 (228-263)||(12134471-12134506)
chr6 (228-263)||(24558869-24558904)
chr6 (228-263)||(28149874-28149909)
chr6 (229-263)||(1744831-1744865)
chr6 (229-263)||(11313371-11313405)
chr6 (229-263)||(16876819-16876853)
chr6 (229-263)||(16876999-16877033)
chr6 (229-263)||(19712393-19712427)
chr6 (229-263)||(21089152-21089186)
chr6 (229-263)||(24055098-24055132)
chr6 (229-263)||(26098423-26098457)
chr6 (230-263)||(12124694-12124727)
chr6 (228-263)||(8144098-8144133)
chr6 (232-263)||(10733430-10733461)
chr6 (229-263)||(3713526-3713560)
chr6 (229-263)||(10418327-10418361)
chr6 (229-263)||(15101100-15101134)
chr6 (229-263)||(15102613-15102647)
chr6 (229-263)||(16590265-16590299)
chr6 (229-263)||(16605081-16605115)
chr6 (229-263)||(17096687-17096721)
chr6 (229-263)||(17147894-17147928)
chr6 (229-263)||(18494506-18494540)
chr6 (229-263)||(19054574-19054608)
chr6 (229-263)||(19291907-19291941)
chr6 (229-263)||(19712598-19712632)
chr6 (229-263)||(25998898-25998932)
chr6 (229-263)||(25999104-25999138)
chr6 (229-263)||(26098629-26098663)
chr6 (229-263)||(26098835-26098869)
chr6 (233-263)||(27914319-27914349)
chr6 (229-263)||(30539501-30539535)
chr6 (233-261)||(8143785-8143813)
chr6 (231-263)||(24558664-24558696)
[»] chr5 (38 HSPs)
chr5 (228-263)||(24994150-24994185)
chr5 (229-263)||(873685-873719)
chr5 (229-263)||(2908758-2908792)
chr5 (229-263)||(3762987-3763021)
chr5 (229-263)||(12965235-12965269)
chr5 (229-263)||(13413665-13413699)
chr5 (229-263)||(13843778-13843812)
chr5 (229-263)||(34457177-34457211)
chr5 (229-263)||(34457384-34457418)
chr5 (229-263)||(38131845-38131879)
chr5 (229-263)||(40168848-40168882)
chr5 (229-263)||(40169030-40169064)
chr5 (231-263)||(24918242-24918274)
chr5 (231-263)||(28358026-28358058)
chr5 (228-263)||(11632512-11632547)
chr5 (228-263)||(13844094-13844129)
chr5 (228-263)||(18914149-18914184)
chr5 (228-263)||(35526976-35527011)
chr5 (228-263)||(35527262-35527297)
chr5 (229-263)||(48300-48334)
chr5 (229-263)||(3015406-3015440)
chr5 (229-263)||(4465174-4465208)
chr5 (229-263)||(18914357-18914391)
chr5 (229-263)||(20720344-20720378)
chr5 (229-263)||(24125143-24125177)
chr5 (229-263)||(27760456-27760490)
chr5 (229-263)||(28156111-28156145)
chr5 (233-263)||(30588134-30588164)
chr5 (229-263)||(38376812-38376846)
chr5 (233-263)||(38663328-38663358)
chr5 (229-263)||(43490452-43490486)
chr5 (229-258)||(3763126-3763155)
chr5 (233-262)||(30588174-30588203)
chr5 (234-263)||(30758308-30758337)
chr5 (234-263)||(30770058-30770087)
chr5 (234-263)||(37995628-37995657)
chr5 (231-263)||(17150239-17150271)
chr5 (231-263)||(26246005-26246037)
[»] chr4 (55 HSPs)
chr4 (228-263)||(27048125-27048160)
chr4 (228-263)||(29113530-29113565)
chr4 (228-263)||(29669351-29669386)
chr4 (229-263)||(990628-990662)
chr4 (229-263)||(23018551-23018585)
chr4 (229-263)||(28395258-28395292)
chr4 (229-263)||(36558455-36558489)
chr4 (229-263)||(45427241-45427275)
chr4 (229-263)||(50858093-50858127)
chr4 (229-263)||(50858406-50858440)
chr4 (229-263)||(51470564-51470598)
chr4 (229-263)||(51470725-51470759)
chr4 (229-263)||(52214696-52214730)
chr4 (229-263)||(53740263-53740297)
chr4 (229-263)||(56511378-56511412)
chr4 (229-263)||(56511585-56511619)
chr4 (230-263)||(400373-400406)
chr4 (230-263)||(43972436-43972469)
chr4 (230-263)||(45426926-45426959)
chr4 (229-261)||(1923185-1923217)
chr4 (228-263)||(15665234-15665269)
chr4 (228-263)||(35399245-35399280)
chr4 (229-260)||(51469565-51469596)
chr4 (229-263)||(991285-991319)
chr4 (229-263)||(5488448-5488482)
chr4 (229-263)||(8559960-8559994)
chr4 (229-263)||(10390464-10390498)
chr4 (229-263)||(12016672-12016706)
chr4 (229-263)||(12016880-12016914)
chr4 (229-263)||(13254464-13254498)
chr4 (229-263)||(15664917-15664951)
chr4 (229-263)||(17076929-17076963)
chr4 (229-263)||(17077133-17077167)
chr4 (229-263)||(17222656-17222690)
chr4 (229-263)||(20545901-20545935)
chr4 (229-263)||(21498612-21498646)
chr4 (229-263)||(25753594-25753628)
chr4 (229-263)||(27048397-27048431)
chr4 (229-263)||(27634085-27634119)
chr4 (229-263)||(27634315-27634349)
chr4 (229-263)||(28245869-28245903)
chr4 (229-263)||(29734642-29734676)
chr4 (229-263)||(34205982-34206016)
chr4 (229-263)||(35399405-35399439)
chr4 (229-263)||(43943754-43943788)
chr4 (229-263)||(53738197-53738231)
chr4 (229-263)||(53739947-53739981)
chr4 (229-263)||(54210458-54210492)
chr4 (229-262)||(21646793-21646826)
chr4 (218-263)||(35645208-35645253)
chr4 (218-263)||(35645497-35645542)
chr4 (229-262)||(53720660-53720693)
chr4 (228-263)||(21498268-21498304)
chr4 (231-263)||(56449777-56449809)
chr4 (231-263)||(56509690-56509722)
[»] chr3 (52 HSPs)
chr3 (228-263)||(35011945-35011980)
chr3 (228-263)||(44574017-44574052)
chr3 (228-263)||(50692607-50692642)
chr3 (229-263)||(4029633-4029667)
chr3 (229-263)||(4256000-4256034)
chr3 (229-263)||(9264075-9264109)
chr3 (229-263)||(9264282-9264316)
chr3 (229-263)||(21750556-21750590)
chr3 (229-263)||(21832188-21832222)
chr3 (229-263)||(22407430-22407464)
chr3 (229-263)||(22407637-22407671)
chr3 (229-263)||(35011738-35011772)
chr3 (229-263)||(44573720-44573754)
chr3 (229-263)||(48685301-48685335)
chr3 (229-263)||(50057110-50057144)
chr3 (229-263)||(50057240-50057274)
chr3 (229-263)||(50057370-50057404)
chr3 (229-263)||(50203846-50203880)
chr3 (229-263)||(50692404-50692438)
chr3 (229-263)||(51338392-51338426)
chr3 (229-263)||(51642417-51642451)
chr3 (229-263)||(51642624-51642658)
chr3 (231-263)||(4191113-4191145)
chr3 (231-263)||(21832682-21832714)
chr3 (228-263)||(11414444-11414479)
chr3 (228-259)||(21833609-21833640)
chr3 (228-263)||(38300271-38300306)
chr3 (229-263)||(3985854-3985888)
chr3 (229-263)||(4255591-4255625)
chr3 (229-263)||(4255818-4255852)
chr3 (229-263)||(9264489-9264523)
chr3 (229-263)||(10758997-10759031)
chr3 (229-263)||(19820517-19820551)
chr3 (229-263)||(22339822-22339856)
chr3 (229-263)||(24539235-24539269)
chr3 (229-263)||(25627909-25627943)
chr3 (229-263)||(26366812-26366846)
chr3 (229-263)||(27177493-27177527)
chr3 (229-263)||(33909619-33909653)
chr3 (229-263)||(34715444-34715478)
chr3 (229-263)||(37058760-37058794)
chr3 (229-263)||(39078670-39078704)
chr3 (229-263)||(39078760-39078794)
chr3 (229-263)||(39956456-39956490)
chr3 (229-263)||(39956663-39956697)
chr3 (229-263)||(40230424-40230458)
chr3 (229-263)||(41380804-41380838)
chr3 (229-263)||(43101360-43101394)
chr3 (229-263)||(45443361-45443395)
chr3 (229-263)||(47833642-47833676)
chr3 (234-263)||(13769285-13769314)
chr3 (230-262)||(53981891-53981923)
[»] chr2 (30 HSPs)
chr2 (228-263)||(32667264-32667299)
chr2 (228-263)||(33985759-33985794)
chr2 (229-263)||(21214190-21214224)
chr2 (229-263)||(23054407-23054441)
chr2 (229-263)||(31761213-31761247)
chr2 (229-263)||(42768323-42768357)
chr2 (229-263)||(43195865-43195899)
chr2 (229-262)||(29923380-29923413)
chr2 (227-263)||(5424769-5424805)
chr2 (228-263)||(20998977-20999012)
chr2 (233-263)||(902004-902034)
chr2 (229-263)||(3435475-3435509)
chr2 (229-263)||(3976460-3976494)
chr2 (229-263)||(3976774-3976808)
chr2 (229-263)||(3976992-3977026)
chr2 (229-263)||(6183355-6183389)
chr2 (229-263)||(8044534-8044568)
chr2 (229-263)||(12431979-12432013)
chr2 (229-263)||(22447181-22447215)
chr2 (229-263)||(25441777-25441811)
chr2 (221-263)||(25441848-25441890)
chr2 (229-263)||(25621274-25621308)
chr2 (229-263)||(31761412-31761446)
chr2 (229-263)||(34775438-34775472)
chr2 (229-263)||(37812502-37812536)
chr2 (229-263)||(40010055-40010089)
chr2 (229-263)||(44403930-44403964)
chr2 (234-263)||(10849485-10849514)
chr2 (234-263)||(17727485-17727514)
chr2 (231-263)||(10429820-10429852)
[»] chr1 (35 HSPs)
chr1 (228-263)||(2997044-2997079)
chr1 (229-263)||(4022114-4022148)
chr1 (229-263)||(9380981-9381015)
chr1 (229-263)||(15392185-15392219)
chr1 (229-263)||(19481381-19481415)
chr1 (229-263)||(20735603-20735637)
chr1 (229-263)||(21638255-21638289)
chr1 (229-263)||(25799265-25799299)
chr1 (229-263)||(29273055-29273089)
chr1 (229-263)||(29273214-29273248)
chr1 (229-263)||(33879767-33879801)
chr1 (229-263)||(33964454-33964488)
chr1 (229-263)||(35926237-35926271)
chr1 (229-262)||(9381181-9381214)
chr1 (230-263)||(15392106-15392139)
chr1 (231-263)||(22892424-22892456)
chr1 (232-263)||(22892680-22892711)
chr1 (228-263)||(37600953-37600988)
chr1 (228-263)||(43423360-43423395)
chr1 (229-263)||(482764-482798)
chr1 (229-263)||(2997250-2997284)
chr1 (229-263)||(13959483-13959517)
chr1 (229-263)||(15391900-15391934)
chr1 (229-263)||(17419868-17419902)
chr1 (229-263)||(29272896-29272930)
chr1 (229-263)||(31305792-31305826)
chr1 (229-263)||(34076683-34076717)
chr1 (229-263)||(38870938-38870972)
chr1 (229-263)||(39649073-39649107)
chr1 (229-263)||(45403521-45403555)
chr1 (229-263)||(48558310-48558344)
chr1 (229-263)||(49828738-49828772)
chr1 (229-263)||(52846838-52846872)
chr1 (228-263)||(463070-463106)
chr1 (229-261)||(21428256-21428288)
[»] scaffold0989 (1 HSPs)
scaffold0989 (229-263)||(2936-2970)
[»] scaffold0060 (1 HSPs)
scaffold0060 (228-263)||(20621-20656)
[»] scaffold0459 (1 HSPs)
scaffold0459 (229-263)||(13379-13413)
[»] scaffold0366 (2 HSPs)
scaffold0366 (229-263)||(11020-11054)
scaffold0366 (229-263)||(14686-14720)
[»] scaffold0054 (1 HSPs)
scaffold0054 (229-263)||(21252-21286)
[»] scaffold1138 (1 HSPs)
scaffold1138 (234-263)||(2073-2102)


Alignment Details
Target: chr8 (Bit Score: 137; Significance: 1e-71; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 119 - 263
Target Start/End: Original strand, 40902272 - 40902416
Alignment:
119 aacattattaagaaggttttggcaccattttttgattcaaactgtaatttggatttcaatgcaattttagcaagaattgatatttgctcaattagaaggg 218  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
40902272 aacattattaagaaggttttggcaccattttttaattcaaactgtaatttggatttcaatgcaattttagcaagaattgatatttgctcaattagaaggg 40902371  T
219 aggatgatgctgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
40902372 aggatgatgctgttgaaatttggggcctaacttatccttacaaaa 40902416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 263
Target Start/End: Original strand, 16454615 - 16454658
Alignment:
220 ggatgatgctgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||| ||| |||||||||||||||||||||||||||||||||||    
16454615 ggataatgatgttgaaatttggggcctaactcatccttacaaaa 16454658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 228 - 263
Target Start/End: Complemental strand, 31767096 - 31767061
Alignment:
228 ctgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||||||||||||||||||    
31767096 ctgttgaaatttggggcctaactcatccttacaaaa 31767061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 7622009 - 7621975
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
7622009 tgttgaaatttggggcctaactcatccttacaaaa 7621975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 10989023 - 10989057
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
10989023 tgttgaaatttggggcctaactcatccttacaaaa 10989057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 10989230 - 10989264
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
10989230 tgttgaaatttggggcctaactcatccttacaaaa 10989264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 18905971 - 18905937
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
18905971 tgttgaaatttggggcctaactcatccttacaaaa 18905937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 20760649 - 20760683
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
20760649 tgttgaaatttggggcctaactcatccttacaaaa 20760683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 30066097 - 30066063
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
30066097 tgttgaaatttggggcctaactcatccttacaaaa 30066063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 32931516 - 32931482
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
32931516 tgttgaaatttggggcctaactcatccttacaaaa 32931482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 36997281 - 36997247
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
36997281 tgttgaaatttggggcctaactcatccttacaaaa 36997247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 43599426 - 43599392
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
43599426 tgttgaaatttggggcctaactcatccttacaaaa 43599392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 43599587 - 43599553
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
43599587 tgttgaaatttggggcctaactcatccttacaaaa 43599553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 43984305 - 43984339
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
43984305 tgttgaaatttggggcctaactcatccttacaaaa 43984339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 227 - 263
Target Start/End: Original strand, 36039781 - 36039817
Alignment:
227 gctgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||| |||||||||||||||||||    
36039781 gctgttgaaatttggggtctaactcatccttacaaaa 36039817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 3183900 - 3183934
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||| ||||||||    
3183900 tgttgaaatttggggcctaactcatcgttacaaaa 3183934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 263
Target Start/End: Complemental strand, 7729782 - 7729752
Alignment:
233 gaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||    
7729782 gaaatttggggcctaactcatccttacaaaa 7729752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 8559696 - 8559662
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||| |||||||||||||||||||||||||||||    
8559696 tgttgtaatttggggcctaactcatccttacaaaa 8559662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 15010810 - 15010844
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||| ||||    
15010810 tgttgaaatttggggcctaactcatccttataaaa 15010844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 15011018 - 15011052
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||| ||||||||||||||||||    
15011018 tgttgaaatttggggcttaactcatccttacaaaa 15011052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 20298505 - 20298539
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||| ||||||||    
20298505 tgttgaaatttggggcctaactcatcattacaaaa 20298539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 21085137 - 21085171
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||| ||||||||    
21085137 tgttgaaatttggggcctaactcatcattacaaaa 21085171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 21653442 - 21653408
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||| |||||||||||||||||||||    
21653442 tgttgaaatttggagcctaactcatccttacaaaa 21653408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 21653919 - 21653885
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||| |||||||||||||||||||||||||||||    
21653919 tgttgtaatttggggcctaactcatccttacaaaa 21653885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 22451463 - 22451429
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||| ||||||||||||||||||    
22451463 tgttgaaatttggggcataactcatccttacaaaa 22451429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 30065900 - 30065866
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||| |||||||||||||    
30065900 tgttgaaatttggggcctaacccatccttacaaaa 30065866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 30176453 - 30176487
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||| ||||||||||||||||||||||||    
30176453 tgttgaaattcggggcctaactcatccttacaaaa 30176487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 33435794 - 33435760
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||| |||||||||||||||||||    
33435794 tgttgaaatttggggtctaactcatccttacaaaa 33435760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 263
Target Start/End: Complemental strand, 34248470 - 34248440
Alignment:
233 gaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||    
34248470 gaaatttggggcctaactcatccttacaaaa 34248440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 36993936 - 36993970
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||| ||||||||||||||||||||||    
36993936 tgttgaaatttgaggcctaactcatccttacaaaa 36993970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 263
Target Start/End: Complemental strand, 34248186 - 34248158
Alignment:
235 aatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||    
34248186 aatttggggcctaactcatccttacaaaa 34248158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 263
Target Start/End: Complemental strand, 36037303 - 36037271
Alignment:
231 ttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||| |||||||||||||||||||    
36037303 ttgaaatttggggtctaactcatccttacaaaa 36037271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000002; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 228 - 263
Target Start/End: Complemental strand, 6783154 - 6783119
Alignment:
228 ctgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||||||||||||||||||    
6783154 ctgttgaaatttggggcctaactcatccttacaaaa 6783119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 228 - 263
Target Start/End: Complemental strand, 41670949 - 41670914
Alignment:
228 ctgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||||||||||||||||||    
41670949 ctgttgaaatttggggcctaactcatccttacaaaa 41670914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 1663593 - 1663627
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
1663593 tgttgaaatttggggcctaactcatccttacaaaa 1663627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 13310414 - 13310448
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
13310414 tgttgaaatttggggcctaactcatccttacaaaa 13310448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 23396724 - 23396690
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
23396724 tgttgaaatttggggcctaactcatccttacaaaa 23396690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 23821665 - 23821699
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
23821665 tgttgaaatttggggcctaactcatccttacaaaa 23821699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 33855600 - 33855566
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
33855600 tgttgaaatttggggcctaactcatccttacaaaa 33855566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 226 - 263
Target Start/End: Original strand, 31357660 - 31357697
Alignment:
226 tgctgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||| ||||||||||||||||||||||    
31357660 tgctgttgaaatttgaggcctaactcatccttacaaaa 31357697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 231 - 263
Target Start/End: Original strand, 257258 - 257290
Alignment:
231 ttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||    
257258 ttgaaatttggggcctaactcatccttacaaaa 257290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 231 - 263
Target Start/End: Original strand, 40703402 - 40703434
Alignment:
231 ttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||    
40703402 ttgaaatttggggcctaactcatccttacaaaa 40703434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 263
Target Start/End: Original strand, 1661179 - 1661214
Alignment:
228 ctgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||| |||||||||    
1661179 ctgttgaaatttggggcctaactcattcttacaaaa 1661214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 263
Target Start/End: Complemental strand, 28910148 - 28910113
Alignment:
228 ctgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||| |||||||||||||||||||    
28910148 ctgttgaaatttgggggctaactcatccttacaaaa 28910113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 263
Target Start/End: Complemental strand, 28910281 - 28910246
Alignment:
228 ctgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||| |||||||||||||||||||    
28910281 ctgttgaaatttgggggctaactcatccttacaaaa 28910246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 263
Target Start/End: Complemental strand, 34590644 - 34590609
Alignment:
228 ctgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||| ||||||||||||||||||    
34590644 ctgttgaaatttggggcttaactcatccttacaaaa 34590609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 263
Target Start/End: Original strand, 43167881 - 43167916
Alignment:
228 ctgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||| ||||||||||||||||||    
43167881 ctgttgaaatttggggcttaactcatccttacaaaa 43167916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 6813067 - 6813101
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||| ||||||    
6813067 tgttgaaatttggggcctaactcatcctcacaaaa 6813101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 8585206 - 8585172
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||| |||||||||||||||||||    
8585206 tgttgaaatttggggtctaactcatccttacaaaa 8585172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 12518159 - 12518193
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||| ||||||||||||||||||||||||||||||    
12518159 tgttaaaatttggggcctaactcatccttacaaaa 12518193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 12578449 - 12578483
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||| |||||||||||||||||||    
12578449 tgttgaaatttggggtctaactcatccttacaaaa 12578483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 23396929 - 23396895
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||| |||||||||||||||||||    
23396929 tgttgaaatttggggtctaactcatccttacaaaa 23396895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 33855806 - 33855772
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||||||| |||||||||    
33855806 tgttgaaatttggggcctaactcattcttacaaaa 33855772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 40121607 - 40121641
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||| ||||||||||||||||||    
40121607 tgttgaaatttggggcgtaactcatccttacaaaa 40121641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 227 - 263
Target Start/End: Original strand, 35866625 - 35866662
Alignment:
227 gctgttgaaattt-ggggcctaactcatccttacaaaa 263  Q
    ||||||||||||| ||||||||||||||||||||||||    
35866625 gctgttgaaattttggggcctaactcatccttacaaaa 35866662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 263
Target Start/End: Complemental strand, 29780260 - 29780228
Alignment:
231 ttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||| ||||    
29780260 ttgaaatttggggcctaactcatccttataaaa 29780228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000002; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 228 - 263
Target Start/End: Original strand, 12134471 - 12134506
Alignment:
228 ctgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||||||||||||||||||    
12134471 ctgttgaaatttggggcctaactcatccttacaaaa 12134506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 228 - 263
Target Start/End: Complemental strand, 24558904 - 24558869
Alignment:
228 ctgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||||||||||||||||||    
24558904 ctgttgaaatttggggcctaactcatccttacaaaa 24558869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 228 - 263
Target Start/End: Complemental strand, 28149909 - 28149874
Alignment:
228 ctgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||||||||||||||||||    
28149909 ctgttgaaatttggggcctaactcatccttacaaaa 28149874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 1744831 - 1744865
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
1744831 tgttgaaatttggggcctaactcatccttacaaaa 1744865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 11313371 - 11313405
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
11313371 tgttgaaatttggggcctaactcatccttacaaaa 11313405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 16876819 - 16876853
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
16876819 tgttgaaatttggggcctaactcatccttacaaaa 16876853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 16876999 - 16877033
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
16876999 tgttgaaatttggggcctaactcatccttacaaaa 16877033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 19712393 - 19712427
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
19712393 tgttgaaatttggggcctaactcatccttacaaaa 19712427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 21089152 - 21089186
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
21089152 tgttgaaatttggggcctaactcatccttacaaaa 21089186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 24055098 - 24055132
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
24055098 tgttgaaatttggggcctaactcatccttacaaaa 24055132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 26098457 - 26098423
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
26098457 tgttgaaatttggggcctaactcatccttacaaaa 26098423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 12124694 - 12124727
Alignment:
230 gttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||||||||||||||||    
12124694 gttgaaatttggggcctaactcatccttacaaaa 12124727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 263
Target Start/End: Complemental strand, 8144133 - 8144098
Alignment:
228 ctgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||| |||||||||||||||||||||||||||||||    
8144133 ctgtcgaaatttggggcctaactcatccttacaaaa 8144098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 232 - 263
Target Start/End: Original strand, 10733430 - 10733461
Alignment:
232 tgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||||||||||||||    
10733430 tgaaatttggggcctaactcatccttacaaaa 10733461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 3713560 - 3713526
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||| ||||||||||||||||||||||    
3713560 tgttgaaatttgtggcctaactcatccttacaaaa 3713526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 10418327 - 10418361
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||| |||||||||||||||||||||||||||||    
10418327 tgttggaatttggggcctaactcatccttacaaaa 10418361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 15101100 - 15101134
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||| ||||||||||||||||||||||||    
15101100 tgttgaaattgggggcctaactcatccttacaaaa 15101134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 15102613 - 15102647
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||| |||||||||||||||||||    
15102613 tgttgaaatttggggtctaactcatccttacaaaa 15102647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 16590299 - 16590265
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||| |||||||||||||||||||    
16590299 tgttgaaatttggggtctaactcatccttacaaaa 16590265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 16605081 - 16605115
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||| |||||||||||||||||||    
16605081 tgttgaaatttggggtctaactcatccttacaaaa 16605115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 17096687 - 17096721
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||| |||||||||||||||||||    
17096687 tgttgaaatttggggtctaactcatccttacaaaa 17096721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 17147894 - 17147928
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||| ||||||||||||||||||||||    
17147894 tgttgaaatttgtggcctaactcatccttacaaaa 17147928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 18494540 - 18494506
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||| ||||||||||||||    
18494540 tgttgaaatttggggcctaattcatccttacaaaa 18494506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 19054608 - 19054574
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||| |||||||||||||||||||    
19054608 tgttgaaatttggggactaactcatccttacaaaa 19054574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 19291907 - 19291941
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||| |||||||||||||||||||||    
19291907 tgttgaaatttggagcctaactcatccttacaaaa 19291941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 19712598 - 19712632
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||| |||||||||||||||||||||||||||||    
19712598 tgttgtaatttggggcctaactcatccttacaaaa 19712632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 25998932 - 25998898
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||| ||||||||||||||    
25998932 tgttgaaatttggggcctaaatcatccttacaaaa 25998898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 25999138 - 25999104
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||||||| |||||||||    
25999138 tgttgaaatttggggcctaactcattcttacaaaa 25999104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 26098663 - 26098629
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||||||| |||||||||    
26098663 tgttgaaatttggggcctaactcattcttacaaaa 26098629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 26098869 - 26098835
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||||||| |||||||||    
26098869 tgttgaaatttggggcctaactcattcttacaaaa 26098835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 263
Target Start/End: Original strand, 27914319 - 27914349
Alignment:
233 gaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||    
27914319 gaaatttggggcctaactcatccttacaaaa 27914349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 30539535 - 30539501
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||| |||||||||||||    
30539535 tgttgaaatttggggcctaacccatccttacaaaa 30539501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 261
Target Start/End: Complemental strand, 8143813 - 8143785
Alignment:
233 gaaatttggggcctaactcatccttacaa 261  Q
    |||||||||||||||||||||||||||||    
8143813 gaaatttggggcctaactcatccttacaa 8143785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 263
Target Start/End: Complemental strand, 24558696 - 24558664
Alignment:
231 ttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||| ||||||    
24558696 ttgaaatttggggcctaactcatcctcacaaaa 24558664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000002; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 228 - 263
Target Start/End: Complemental strand, 24994185 - 24994150
Alignment:
228 ctgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||||||||||||||||||    
24994185 ctgttgaaatttggggcctaactcatccttacaaaa 24994150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 873685 - 873719
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
873685 tgttgaaatttggggcctaactcatccttacaaaa 873719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 2908758 - 2908792
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
2908758 tgttgaaatttggggcctaactcatccttacaaaa 2908792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 3763021 - 3762987
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
3763021 tgttgaaatttggggcctaactcatccttacaaaa 3762987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 12965235 - 12965269
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
12965235 tgttgaaatttggggcctaactcatccttacaaaa 12965269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 13413699 - 13413665
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
13413699 tgttgaaatttggggcctaactcatccttacaaaa 13413665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 13843812 - 13843778
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
13843812 tgttgaaatttggggcctaactcatccttacaaaa 13843778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 34457211 - 34457177
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
34457211 tgttgaaatttggggcctaactcatccttacaaaa 34457177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 34457418 - 34457384
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
34457418 tgttgaaatttggggcctaactcatccttacaaaa 34457384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 38131879 - 38131845
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
38131879 tgttgaaatttggggcctaactcatccttacaaaa 38131845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 40168848 - 40168882
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
40168848 tgttgaaatttggggcctaactcatccttacaaaa 40168882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 40169030 - 40169064
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
40169030 tgttgaaatttggggcctaactcatccttacaaaa 40169064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 231 - 263
Target Start/End: Complemental strand, 24918274 - 24918242
Alignment:
231 ttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||    
24918274 ttgaaatttggggcctaactcatccttacaaaa 24918242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 231 - 263
Target Start/End: Original strand, 28358026 - 28358058
Alignment:
231 ttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||    
28358026 ttgaaatttggggcctaactcatccttacaaaa 28358058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 263
Target Start/End: Complemental strand, 11632547 - 11632512
Alignment:
228 ctgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||| |||||||||||||||||    
11632547 ctgttgaaatttggggcccaactcatccttacaaaa 11632512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 263
Target Start/End: Complemental strand, 13844129 - 13844094
Alignment:
228 ctgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||| |||||||||||||||||||||||    
13844129 ctgttgaaatttagggcctaactcatccttacaaaa 13844094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 263
Target Start/End: Original strand, 18914149 - 18914184
Alignment:
228 ctgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||| |||||||||    
18914149 ctgttgaaatttggggcctaactcattcttacaaaa 18914184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 263
Target Start/End: Original strand, 35526976 - 35527011
Alignment:
228 ctgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||| |||||||||||||||||||||||||||||    
35526976 ctgttgtaatttggggcctaactcatccttacaaaa 35527011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 263
Target Start/End: Original strand, 35527262 - 35527297
Alignment:
228 ctgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||| |||||||||||||||||||||||||||||    
35527262 ctgttgtaatttggggcctaactcatccttacaaaa 35527297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 48300 - 48334
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||| ||||||||||||||||||||||||    
48300 tgttgaaattgggggcctaactcatccttacaaaa 48334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 3015406 - 3015440
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||| ||||||||||    
3015406 tgttgaaatttggggcctaactcaaccttacaaaa 3015440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 4465174 - 4465208
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||| ||||||||||||||||||    
4465174 tgttgaaatttggggcttaactcatccttacaaaa 4465208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 18914357 - 18914391
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||||||| |||||||||    
18914357 tgttgaaatttggggcctaactcattcttacaaaa 18914391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 20720344 - 20720378
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||| ||||||||||||||||||    
20720344 tgttgaaatttggggcttaactcatccttacaaaa 20720378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 24125177 - 24125143
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||| |||||||||||||||||||    
24125177 tgttgaaatttggggtctaactcatccttacaaaa 24125143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 27760490 - 27760456
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||| |||||||||||||||||||    
27760490 tgttgaaatttggggtctaactcatccttacaaaa 27760456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 28156145 - 28156111
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||| ||||||||||||||    
28156145 tgttgaaatttggggcctaattcatccttacaaaa 28156111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 263
Target Start/End: Complemental strand, 30588164 - 30588134
Alignment:
233 gaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||    
30588164 gaaatttggggcctaactcatccttacaaaa 30588134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 38376846 - 38376812
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||| |||||||||||||||||||||||||||||    
38376846 tgttgtaatttggggcctaactcatccttacaaaa 38376812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 263
Target Start/End: Complemental strand, 38663358 - 38663328
Alignment:
233 gaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||    
38663358 gaaatttggggcctaactcatccttacaaaa 38663328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 43490452 - 43490486
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||| ||||||||||||||||||||||||    
43490452 tgttgaaattgggggcctaactcatccttacaaaa 43490486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 229 - 258
Target Start/End: Complemental strand, 3763155 - 3763126
Alignment:
229 tgttgaaatttggggcctaactcatcctta 258  Q
    ||||||||||||||||||||||||||||||    
3763155 tgttgaaatttggggcctaactcatcctta 3763126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 262
Target Start/End: Complemental strand, 30588203 - 30588174
Alignment:
233 gaaatttggggcctaactcatccttacaaa 262  Q
    ||||||||||||||||||||||||||||||    
30588203 gaaatttggggcctaactcatccttacaaa 30588174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 234 - 263
Target Start/End: Original strand, 30758308 - 30758337
Alignment:
234 aaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||||||||||||    
30758308 aaatttggggcctaactcatccttacaaaa 30758337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 234 - 263
Target Start/End: Original strand, 30770058 - 30770087
Alignment:
234 aaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||||||||||||    
30770058 aaatttggggcctaactcatccttacaaaa 30770087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 234 - 263
Target Start/End: Original strand, 37995628 - 37995657
Alignment:
234 aaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||||||||||||    
37995628 aaatttggggcctaactcatccttacaaaa 37995657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 263
Target Start/End: Original strand, 17150239 - 17150271
Alignment:
231 ttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||| ||||||||||||||    
17150239 ttgaaatttggggcctaattcatccttacaaaa 17150271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 263
Target Start/End: Complemental strand, 26246037 - 26246005
Alignment:
231 ttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||| |||||||||||||||||||||||    
26246037 ttgaaatttagggcctaactcatccttacaaaa 26246005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000002; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 228 - 263
Target Start/End: Original strand, 27048125 - 27048160
Alignment:
228 ctgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||||||||||||||||||    
27048125 ctgttgaaatttggggcctaactcatccttacaaaa 27048160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 228 - 263
Target Start/End: Complemental strand, 29113565 - 29113530
Alignment:
228 ctgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||||||||||||||||||    
29113565 ctgttgaaatttggggcctaactcatccttacaaaa 29113530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 228 - 263
Target Start/End: Original strand, 29669351 - 29669386
Alignment:
228 ctgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||||||||||||||||||    
29669351 ctgttgaaatttggggcctaactcatccttacaaaa 29669386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 990662 - 990628
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
990662 tgttgaaatttggggcctaactcatccttacaaaa 990628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 23018585 - 23018551
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
23018585 tgttgaaatttggggcctaactcatccttacaaaa 23018551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 28395292 - 28395258
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
28395292 tgttgaaatttggggcctaactcatccttacaaaa 28395258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 36558455 - 36558489
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
36558455 tgttgaaatttggggcctaactcatccttacaaaa 36558489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 45427241 - 45427275
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
45427241 tgttgaaatttggggcctaactcatccttacaaaa 45427275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 50858127 - 50858093
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
50858127 tgttgaaatttggggcctaactcatccttacaaaa 50858093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 50858440 - 50858406
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
50858440 tgttgaaatttggggcctaactcatccttacaaaa 50858406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 51470598 - 51470564
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
51470598 tgttgaaatttggggcctaactcatccttacaaaa 51470564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 51470759 - 51470725
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
51470759 tgttgaaatttggggcctaactcatccttacaaaa 51470725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 52214730 - 52214696
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
52214730 tgttgaaatttggggcctaactcatccttacaaaa 52214696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 53740297 - 53740263
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
53740297 tgttgaaatttggggcctaactcatccttacaaaa 53740263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 56511412 - 56511378
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
56511412 tgttgaaatttggggcctaactcatccttacaaaa 56511378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 56511619 - 56511585
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
56511619 tgttgaaatttggggcctaactcatccttacaaaa 56511585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 400373 - 400406
Alignment:
230 gttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||||||||||||||||    
400373 gttgaaatttggggcctaactcatccttacaaaa 400406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 43972469 - 43972436
Alignment:
230 gttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||||||||||||||||    
43972469 gttgaaatttggggcctaactcatccttacaaaa 43972436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 45426926 - 45426959
Alignment:
230 gttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||||||||||||||||    
45426926 gttgaaatttggggcctaactcatccttacaaaa 45426959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 229 - 261
Target Start/End: Original strand, 1923185 - 1923217
Alignment:
229 tgttgaaatttggggcctaactcatccttacaa 261  Q
    |||||||||||||||||||||||||||||||||    
1923185 tgttgaaatttggggcctaactcatccttacaa 1923217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 263
Target Start/End: Complemental strand, 15665269 - 15665234
Alignment:
228 ctgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||| ||||||||||||||||||||||    
15665269 ctgttgaaatttgaggcctaactcatccttacaaaa 15665234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 263
Target Start/End: Original strand, 35399245 - 35399280
Alignment:
228 ctgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||||||| ||||||||||    
35399245 ctgttgaaatttggggcctaactcaaccttacaaaa 35399280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 260
Target Start/End: Complemental strand, 51469596 - 51469565
Alignment:
229 tgttgaaatttggggcctaactcatccttaca 260  Q
    ||||||||||||||||||||||||||||||||    
51469596 tgttgaaatttggggcctaactcatccttaca 51469565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 991319 - 991285
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||| |||||||||||||||||||    
991319 tgttgaaatttggggtctaactcatccttacaaaa 991285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 5488482 - 5488448
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||| ||||||||||||||||||||||    
5488482 tgttgaaatttgaggcctaactcatccttacaaaa 5488448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 8559960 - 8559994
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||| |||||||||||||||||||    
8559960 tgttgaaatttggggtctaactcatccttacaaaa 8559994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 10390464 - 10390498
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||| |||||||||||||||||||    
10390464 tgttgaaatttggggtctaactcatccttacaaaa 10390498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 12016672 - 12016706
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||| ||||||||||||||||||||||||    
12016672 tgttgaaattgggggcctaactcatccttacaaaa 12016706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 12016880 - 12016914
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||| ||||||||||||||||||||||||    
12016880 tgttgaaattgggggcctaactcatccttacaaaa 12016914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 13254498 - 13254464
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||||||| |||||||||    
13254498 tgttgaaatttggggcctaactcatgcttacaaaa 13254464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 15664951 - 15664917
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||| ||||||||    
15664951 tgttgaaatttggggcctaactcatcgttacaaaa 15664917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 17076929 - 17076963
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||| ||||||||||    
17076929 tgttgaaatttggggcctaactcaaccttacaaaa 17076963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 17077133 - 17077167
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||| ||||||||||    
17077133 tgttgaaatttggggcctaactcaaccttacaaaa 17077167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 17222656 - 17222690
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||| |||||||||||||    
17222656 tgttgaaatttggggcctaacacatccttacaaaa 17222690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 20545901 - 20545935
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||| ||||||||    
20545901 tgttgaaatttggggcctaactcatcattacaaaa 20545935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 21498646 - 21498612
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||| |||||||||||||||||||||||||||||    
21498646 tgttgtaatttggggcctaactcatccttacaaaa 21498612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 25753594 - 25753628
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||| ||||||||||||||||||||    
25753594 tgttgaaatttgggacctaactcatccttacaaaa 25753628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 27048397 - 27048431
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||| ||||||||||||||||||||    
27048397 tgttgaaatttgggacctaactcatccttacaaaa 27048431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 27634085 - 27634119
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||| |||||||||||||||||||||||||||||    
27634085 tgttgtaatttggggcctaactcatccttacaaaa 27634119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 27634315 - 27634349
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||| |||||||||||||||||||||||||||||    
27634315 tgttgtaatttggggcctaactcatccttacaaaa 27634349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 28245903 - 28245869
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||| ||||||||||||||||||||||||    
28245903 tgttgaaattgggggcctaactcatccttacaaaa 28245869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 29734676 - 29734642
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||| |||||||||||||||||    
29734676 tgttgaaatttggggcccaactcatccttacaaaa 29734642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 34205982 - 34206016
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||| ||||||||||||||||||||    
34205982 tgttgaaatttgggacctaactcatccttacaaaa 34206016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 35399405 - 35399439
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||| ||||||||||    
35399405 tgttgaaatttggggcctaactcaaccttacaaaa 35399439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 43943788 - 43943754
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||| ||||||||||||||||||||||||    
43943788 tgttgaaattgggggcctaactcatccttacaaaa 43943754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 53738197 - 53738231
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||| ||||||||||||||    
53738197 tgttgaaatttggggcctaagtcatccttacaaaa 53738231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 53739981 - 53739947
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||| ||||||||||||||    
53739981 tgttgaaatttggggcctaaatcatccttacaaaa 53739947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 54210492 - 54210458
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||| |||||||||||||||||||||||||||||    
54210492 tgttgtaatttggggcctaactcatccttacaaaa 54210458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 229 - 262
Target Start/End: Original strand, 21646793 - 21646826
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaa 262  Q
    ||||||||||||||| ||||||||||||||||||    
21646793 tgttgaaatttggggtctaactcatccttacaaa 21646826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 35645208 - 35645253
Alignment:
218 gaggatgatgctgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||| |||| |||||||||||||||||||||||||| | ||||||    
35645208 gaggaagatgttgttgaaatttggggcctaactcatcatcacaaaa 35645253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 35645497 - 35645542
Alignment:
218 gaggatgatgctgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||| |||| |||||||||||||||||||||||||| | ||||||    
35645497 gaggaagatgttgttgaaatttggggcctaactcatcatcacaaaa 35645542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 229 - 262
Target Start/End: Original strand, 53720660 - 53720693
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaa 262  Q
    |||||||||||||||||||||||||| |||||||    
53720660 tgttgaaatttggggcctaactcatctttacaaa 53720693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 263
Target Start/End: Complemental strand, 21498304 - 21498268
Alignment:
228 ctgttgaaattt-ggggcctaactcatccttacaaaa 263  Q
    |||||||||||| ||||||||||||||||||||||||    
21498304 ctgttgaaattttggggcctaactcatccttacaaaa 21498268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 263
Target Start/End: Complemental strand, 56449809 - 56449777
Alignment:
231 ttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||||||| |||||||    
56449809 ttgaaatttggggcctaactcatccgtacaaaa 56449777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 263
Target Start/End: Complemental strand, 56509722 - 56509690
Alignment:
231 ttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||||||| |||||||    
56509722 ttgaaatttggggcctaactcatccgtacaaaa 56509690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000002; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 228 - 263
Target Start/End: Complemental strand, 35011980 - 35011945
Alignment:
228 ctgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||||||||||||||||||    
35011980 ctgttgaaatttggggcctaactcatccttacaaaa 35011945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 228 - 263
Target Start/End: Complemental strand, 44574052 - 44574017
Alignment:
228 ctgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||||||||||||||||||    
44574052 ctgttgaaatttggggcctaactcatccttacaaaa 44574017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 228 - 263
Target Start/End: Complemental strand, 50692642 - 50692607
Alignment:
228 ctgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||||||||||||||||||    
50692642 ctgttgaaatttggggcctaactcatccttacaaaa 50692607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 4029633 - 4029667
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
4029633 tgttgaaatttggggcctaactcatccttacaaaa 4029667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 4256034 - 4256000
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
4256034 tgttgaaatttggggcctaactcatccttacaaaa 4256000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 9264075 - 9264109
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
9264075 tgttgaaatttggggcctaactcatccttacaaaa 9264109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 9264282 - 9264316
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
9264282 tgttgaaatttggggcctaactcatccttacaaaa 9264316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 21750590 - 21750556
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
21750590 tgttgaaatttggggcctaactcatccttacaaaa 21750556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 21832188 - 21832222
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
21832188 tgttgaaatttggggcctaactcatccttacaaaa 21832222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 22407430 - 22407464
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
22407430 tgttgaaatttggggcctaactcatccttacaaaa 22407464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 22407637 - 22407671
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
22407637 tgttgaaatttggggcctaactcatccttacaaaa 22407671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 35011772 - 35011738
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
35011772 tgttgaaatttggggcctaactcatccttacaaaa 35011738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 44573754 - 44573720
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
44573754 tgttgaaatttggggcctaactcatccttacaaaa 44573720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 48685301 - 48685335
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
48685301 tgttgaaatttggggcctaactcatccttacaaaa 48685335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 50057144 - 50057110
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
50057144 tgttgaaatttggggcctaactcatccttacaaaa 50057110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 50057274 - 50057240
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
50057274 tgttgaaatttggggcctaactcatccttacaaaa 50057240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 50057404 - 50057370
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
50057404 tgttgaaatttggggcctaactcatccttacaaaa 50057370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 50203846 - 50203880
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
50203846 tgttgaaatttggggcctaactcatccttacaaaa 50203880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 50692438 - 50692404
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
50692438 tgttgaaatttggggcctaactcatccttacaaaa 50692404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 51338392 - 51338426
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
51338392 tgttgaaatttggggcctaactcatccttacaaaa 51338426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 51642417 - 51642451
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
51642417 tgttgaaatttggggcctaactcatccttacaaaa 51642451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 51642624 - 51642658
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
51642624 tgttgaaatttggggcctaactcatccttacaaaa 51642658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 231 - 263
Target Start/End: Original strand, 4191113 - 4191145
Alignment:
231 ttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||    
4191113 ttgaaatttggggcctaactcatccttacaaaa 4191145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 231 - 263
Target Start/End: Original strand, 21832682 - 21832714
Alignment:
231 ttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||    
21832682 ttgaaatttggggcctaactcatccttacaaaa 21832714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 263
Target Start/End: Complemental strand, 11414479 - 11414444
Alignment:
228 ctgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||| ||||||||||||||||||||||    
11414479 ctgttgaaatttgaggcctaactcatccttacaaaa 11414444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 259
Target Start/End: Complemental strand, 21833640 - 21833609
Alignment:
228 ctgttgaaatttggggcctaactcatccttac 259  Q
    ||||||||||||||||||||||||||||||||    
21833640 ctgttgaaatttggggcctaactcatccttac 21833609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 263
Target Start/End: Original strand, 38300271 - 38300306
Alignment:
228 ctgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||| ||||||||||||||||||||    
38300271 ctgttgaaatttgggacctaactcatccttacaaaa 38300306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 3985888 - 3985854
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||| |||||||||||||||||||||||||||    
3985888 tgttgaagtttggggcctaactcatccttacaaaa 3985854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 4255625 - 4255591
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||||||||||| |||||    
4255625 tgttgaaatttggggcctaactcatccttgcaaaa 4255591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 4255852 - 4255818
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||| ||||||||||||||||||||    
4255852 tgttgaaatttgggtcctaactcatccttacaaaa 4255818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 9264489 - 9264523
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||| |||||||||||||||||||||||||||||    
9264489 tgttgtaatttggggcctaactcatccttacaaaa 9264523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 10758997 - 10759031
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||| |||||||||||||||||||    
10758997 tgttgaaatttggggtctaactcatccttacaaaa 10759031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 19820517 - 19820551
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||| ||||||||||||||||||||||    
19820517 tgttgaaatttgaggcctaactcatccttacaaaa 19820551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 22339856 - 22339822
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||| ||||||||||||||||||||||||    
22339856 tgttgaaattgggggcctaactcatccttacaaaa 22339822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 24539269 - 24539235
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||| |||||||||||||||||||||||||||    
24539269 tgttgaagtttggggcctaactcatccttacaaaa 24539235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 25627909 - 25627943
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||| |||||||||||||||||||||||||||||    
25627909 tgttggaatttggggcctaactcatccttacaaaa 25627943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 26366846 - 26366812
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||| ||||||||||||||||||||||||    
26366846 tgttgaaattgggggcctaactcatccttacaaaa 26366812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 27177527 - 27177493
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||| ||||||||||||||    
27177527 tgttgaaatttggggcctaaatcatccttacaaaa 27177493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 33909619 - 33909653
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||| |||||||||||||||||||    
33909619 tgttgaaatttggggtctaactcatccttacaaaa 33909653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 34715444 - 34715478
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||| ||||||||||||||||||    
34715444 tgttgaaatttggggcataactcatccttacaaaa 34715478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 37058760 - 37058794
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||| |||||||||||||||||||||||    
37058760 tgttgaaattttgggcctaactcatccttacaaaa 37058794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 39078670 - 39078704
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||| |||||||||||||||||||||||||||||    
39078670 tgttgtaatttggggcctaactcatccttacaaaa 39078704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 39078760 - 39078794
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||| |||||||||||||||||||||||||||||    
39078760 tgttgtaatttggggcctaactcatccttacaaaa 39078794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 39956456 - 39956490
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||| ||||||||||||||    
39956456 tgttgaaatttggggcctaattcatccttacaaaa 39956490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 39956663 - 39956697
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||| |||||||||||||||||||||    
39956663 tgttgaaatttggagcctaactcatccttacaaaa 39956697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 40230424 - 40230458
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||| ||||||||||    
40230424 tgttgaaatttggggcctaactcaaccttacaaaa 40230458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 41380838 - 41380804
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||| ||||||||||    
41380838 tgttgaaatttggggcctaactcaaccttacaaaa 41380804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 43101360 - 43101394
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||| |||||||||||||||||    
43101360 tgttgaaatttggggccaaactcatccttacaaaa 43101394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 45443395 - 45443361
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||| ||||    
45443395 tgttgaaatttggggcctaactcatccttaaaaaa 45443361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 47833642 - 47833676
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||| ||||||||||||||    
47833642 tgttgaaatttggggcctaaatcatccttacaaaa 47833676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 234 - 263
Target Start/End: Original strand, 13769285 - 13769314
Alignment:
234 aaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||||||||||||    
13769285 aaatttggggcctaactcatccttacaaaa 13769314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 262
Target Start/End: Complemental strand, 53981923 - 53981891
Alignment:
230 gttgaaatttggggcctaactcatccttacaaa 262  Q
    |||||||||||||| ||||||||||||||||||    
53981923 gttgaaatttggggtctaactcatccttacaaa 53981891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000002; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 228 - 263
Target Start/End: Complemental strand, 32667299 - 32667264
Alignment:
228 ctgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||||||||||||||||||    
32667299 ctgttgaaatttggggcctaactcatccttacaaaa 32667264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 228 - 263
Target Start/End: Original strand, 33985759 - 33985794
Alignment:
228 ctgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||||||||||||||||||    
33985759 ctgttgaaatttggggcctaactcatccttacaaaa 33985794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 21214190 - 21214224
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
21214190 tgttgaaatttggggcctaactcatccttacaaaa 21214224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 23054441 - 23054407
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
23054441 tgttgaaatttggggcctaactcatccttacaaaa 23054407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 31761247 - 31761213
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
31761247 tgttgaaatttggggcctaactcatccttacaaaa 31761213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 42768323 - 42768357
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
42768323 tgttgaaatttggggcctaactcatccttacaaaa 42768357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 43195899 - 43195865
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
43195899 tgttgaaatttggggcctaactcatccttacaaaa 43195865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 262
Target Start/End: Complemental strand, 29923413 - 29923380
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaa 262  Q
    ||||||||||||||||||||||||||||||||||    
29923413 tgttgaaatttggggcctaactcatccttacaaa 29923380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 227 - 263
Target Start/End: Original strand, 5424769 - 5424805
Alignment:
227 gctgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||| |||||||||||||||||||    
5424769 gctgttgaaatttggggtctaactcatccttacaaaa 5424805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 263
Target Start/End: Original strand, 20998977 - 20999012
Alignment:
228 ctgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||| ||||||||||||||||||||||||    
20998977 ctgttgaaattgggggcctaactcatccttacaaaa 20999012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 263
Target Start/End: Complemental strand, 902034 - 902004
Alignment:
233 gaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||    
902034 gaaatttggggcctaactcatccttacaaaa 902004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 3435475 - 3435509
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||| |||||||||||||||||||||||||||||    
3435475 tgttgtaatttggggcctaactcatccttacaaaa 3435509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 3976460 - 3976494
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||| |||||||||||||||||||||||||||||    
3976460 tgttgtaatttggggcctaactcatccttacaaaa 3976494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 3976774 - 3976808
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||| |||||||||||||||||||||||||||||    
3976774 tgttgtaatttggggcctaactcatccttacaaaa 3976808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 3976992 - 3977026
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||| |||||||||||||||||||||||||||||    
3976992 tgttgtaatttggggcctaactcatccttacaaaa 3977026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 6183355 - 6183389
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||| |||||||||||||||||||    
6183355 tgttgaaatttggggtctaactcatccttacaaaa 6183389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 8044534 - 8044568
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||| ||||||||||||||||||||    
8044534 tgttgaaatttgggacctaactcatccttacaaaa 8044568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 12432013 - 12431979
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||| |||||||||||||||    
12432013 tgttgaaatttggggcctagctcatccttacaaaa 12431979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 22447215 - 22447181
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||| |||||||||||||||||||    
22447215 tgttgaaatttggggtctaactcatccttacaaaa 22447181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 25441811 - 25441777
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||| ||||||||||||||||||||    
25441811 tgttgaaatttgggtcctaactcatccttacaaaa 25441777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 263
Target Start/End: Complemental strand, 25441890 - 25441848
Alignment:
221 gatgatgctgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||| || ||||||||||| ||||||||||||||||||||    
25441890 gatgatgatgatgaaatttgggtcctaactcatccttacaaaa 25441848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 25621274 - 25621308
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||| ||||||||||||||||||||||||    
25621274 tgttgaaattgggggcctaactcatccttacaaaa 25621308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 31761446 - 31761412
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||| ||||||||||||||||||    
31761446 tgttgaaatttggggcttaactcatccttacaaaa 31761412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 34775472 - 34775438
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||| ||||||||||||||||||||||||    
34775472 tgttgaaattgggggcctaactcatccttacaaaa 34775438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 37812502 - 37812536
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||| |||||||||||||||||||||||||||||    
37812502 tgttgtaatttggggcctaactcatccttacaaaa 37812536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 40010089 - 40010055
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||| |||||||||||||    
40010089 tgttgaaatttggggcctaacacatccttacaaaa 40010055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 44403930 - 44403964
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||| ||||||||||||||||||||    
44403930 tgttgaaatttgggacctaactcatccttacaaaa 44403964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 234 - 263
Target Start/End: Original strand, 10849485 - 10849514
Alignment:
234 aaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||||||||||||    
10849485 aaatttggggcctaactcatccttacaaaa 10849514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 234 - 263
Target Start/End: Complemental strand, 17727514 - 17727485
Alignment:
234 aaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||||||||||||    
17727514 aaatttggggcctaactcatccttacaaaa 17727485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 263
Target Start/End: Complemental strand, 10429852 - 10429820
Alignment:
231 ttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||| |||||||||||||||||||    
10429852 ttgaaatttggggtctaactcatccttacaaaa 10429820  T

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Target: chr1 (Bit Score: 36; Significance: 0.00000000002; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 228 - 263
Target Start/End: Original strand, 2997044 - 2997079
Alignment:
228 ctgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||||||||||||||||||    
2997044 ctgttgaaatttggggcctaactcatccttacaaaa 2997079  T

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Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 4022114 - 4022148
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
4022114 tgttgaaatttggggcctaactcatccttacaaaa 4022148  T

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Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 9381015 - 9380981
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
9381015 tgttgaaatttggggcctaactcatccttacaaaa 9380981  T

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Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 15392219 - 15392185
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
15392219 tgttgaaatttggggcctaactcatccttacaaaa 15392185  T

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Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 19481381 - 19481415
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
19481381 tgttgaaatttggggcctaactcatccttacaaaa 19481415  T

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Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 20735637 - 20735603
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
20735637 tgttgaaatttggggcctaactcatccttacaaaa 20735603  T

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Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 21638255 - 21638289
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
21638255 tgttgaaatttggggcctaactcatccttacaaaa 21638289  T

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Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 25799299 - 25799265
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
25799299 tgttgaaatttggggcctaactcatccttacaaaa 25799265  T

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Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 29273055 - 29273089
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
29273055 tgttgaaatttggggcctaactcatccttacaaaa 29273089  T

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Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 29273214 - 29273248
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
29273214 tgttgaaatttggggcctaactcatccttacaaaa 29273248  T

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Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 33879767 - 33879801
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
33879767 tgttgaaatttggggcctaactcatccttacaaaa 33879801  T

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Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 33964488 - 33964454
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
33964488 tgttgaaatttggggcctaactcatccttacaaaa 33964454  T

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Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 35926237 - 35926271
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
35926237 tgttgaaatttggggcctaactcatccttacaaaa 35926271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 262
Target Start/End: Complemental strand, 9381214 - 9381181
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaa 262  Q
    ||||||||||||||||||||||||||||||||||    
9381214 tgttgaaatttggggcctaactcatccttacaaa 9381181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 15392139 - 15392106
Alignment:
230 gttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||||||||||||||||    
15392139 gttgaaatttggggcctaactcatccttacaaaa 15392106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 231 - 263
Target Start/End: Original strand, 22892424 - 22892456
Alignment:
231 ttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||    
22892424 ttgaaatttggggcctaactcatccttacaaaa 22892456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 232 - 263
Target Start/End: Original strand, 22892680 - 22892711
Alignment:
232 tgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||||||||||||||    
22892680 tgaaatttggggcctaactcatccttacaaaa 22892711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 263
Target Start/End: Complemental strand, 37600988 - 37600953
Alignment:
228 ctgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||| ||||||||||||||||||    
37600988 ctgttgaaatttggggcttaactcatccttacaaaa 37600953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 263
Target Start/End: Complemental strand, 43423395 - 43423360
Alignment:
228 ctgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||| ||||||||||||||||||||||||||||||    
43423395 ctgttaaaatttggggcctaactcatccttacaaaa 43423360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 482798 - 482764
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||| ||||    
482798 tgttgaaatttggggcctaactcatccttaaaaaa 482764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 2997250 - 2997284
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||| ||||||||    
2997250 tgttgaaatttggggcctaactcatctttacaaaa 2997284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 13959517 - 13959483
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||| ||||    
13959517 tgttgaaatttggggcctaactcatccttaaaaaa 13959483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 15391934 - 15391900
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||| ||||||||||||||||    
15391934 tgttgaaatttggggccttactcatccttacaaaa 15391900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 17419902 - 17419868
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||| |||||||||||||||||||    
17419902 tgttgaaatttggggtctaactcatccttacaaaa 17419868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 29272896 - 29272930
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||| ||||||||||||||||||||||    
29272896 tgttgaaatttgaggcctaactcatccttacaaaa 29272930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 31305826 - 31305792
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||| |||||||||||||||||||||    
31305826 tgttgaaatttggagcctaactcatccttacaaaa 31305792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 34076717 - 34076683
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||| ||||    
34076717 tgttgaaatttggggcctaactcatccttataaaa 34076683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 38870938 - 38870972
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||| ||||||||||||||||||||||    
38870938 tgttgaaatttgaggcctaactcatccttacaaaa 38870972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 39649073 - 39649107
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||| ||||||||||||||||||    
39649073 tgttgaaatttggggcataactcatccttacaaaa 39649107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 45403555 - 45403521
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||| ||||||||||||||||||||||    
45403555 tgttgaaatttgaggcctaactcatccttacaaaa 45403521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 48558310 - 48558344
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||| ||||||||||||||||||    
48558310 tgttgaaatttggggcttaactcatccttacaaaa 48558344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 49828772 - 49828738
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||||||| |||||||||    
49828772 tgttgaaatttggggcctaactcattcttacaaaa 49828738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 52846838 - 52846872
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||| ||||||||||||||||||    
52846838 tgttgaaatttggggcttaactcatccttacaaaa 52846872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 263
Target Start/End: Original strand, 463070 - 463106
Alignment:
228 ctgttgaaattt-ggggcctaactcatccttacaaaa 263  Q
    |||||||||||| ||||||||||||||||||||||||    
463070 ctgttgaaattttggggcctaactcatccttacaaaa 463106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 261
Target Start/End: Original strand, 21428256 - 21428288
Alignment:
229 tgttgaaatttggggcctaactcatccttacaa 261  Q
    |||||||||||||||||||||||||||| ||||    
21428256 tgttgaaatttggggcctaactcatcctcacaa 21428288  T

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Target: scaffold0989 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 2936 - 2970
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||||||||||||||||||||||||    
2936 tgttgaaatttggggcctaactcatccttacaaaa 2970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 228 - 263
Target Start/End: Complemental strand, 20656 - 20621
Alignment:
228 ctgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||| |||||||||||||||||||||||||||||    
20656 ctgttgtaatttggggcctaactcatccttacaaaa 20621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 13413 - 13379
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||| ||||||||||||||||||||    
13413 tgttgaaatttgggacctaactcatccttacaaaa 13379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 11054 - 11020
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||| ||||||||||||||||||||    
11054 tgttgaaatttgggacctaactcatccttacaaaa 11020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 14720 - 14686
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||||| ||||||||||||||||||||    
14720 tgttgaaatttgggacctaactcatccttacaaaa 14686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 21252 - 21286
Alignment:
229 tgttgaaatttggggcctaactcatccttacaaaa 263  Q
    |||||||||||| ||||||||||||||||||||||    
21252 tgttgaaatttgaggcctaactcatccttacaaaa 21286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1138 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1138
Description:

Target: scaffold1138; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 234 - 263
Target Start/End: Original strand, 2073 - 2102
Alignment:
234 aaatttggggcctaactcatccttacaaaa 263  Q
    ||||||||||||||||||||||||||||||    
2073 aaatttggggcctaactcatccttacaaaa 2102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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