View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11750_high_23 (Length: 353)
Name: NF11750_high_23
Description: NF11750
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11750_high_23 |
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Alignment Details
Target: chr3 (Bit Score: 314; Significance: 1e-177; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 17 - 346
Target Start/End: Original strand, 48697304 - 48697633
Alignment:
| Q |
17 |
ggagcataatgatgcaacttctgatgatacaacaacagaaggtttcttccaattccaacctcccaatttaggccatatagtctcttccggtggagctaac |
116 |
Q |
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| T |
48697304 |
ggagcataatgatgcaacttctgatgatacaacaacagaaggtttcttccaattccaacctcccaatttaggccatatagtctcttccggtggagcaaac |
48697403 |
T |
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| Q |
117 |
agaactcacaacaagttattgtcgcacaaattttgtggattttctgagtgttcattctcatttccctctacttccaatgacaacatatcaaaaggaacat |
216 |
Q |
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| T |
48697404 |
agaactcacaacaagttattgtcgcacaaattttgtggattttctgagagttcattctcatttccctctacttccaatgacaacatatcaaaaggaacat |
48697503 |
T |
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| Q |
217 |
gttcagttgatgattcatcttcattggttgatgcttcagatatgtctgaatctgctagttcatctagccacaaacatcatctatataatgctcatgcatg |
316 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48697504 |
gttcagttgatgattcatcttcattggttgatgattcagatatgtctgaatctgctagttcatctagccacaaacatcatctatataatgctcatgcatg |
48697603 |
T |
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| Q |
317 |
gttccagaatggtattgcagattcatctca |
346 |
Q |
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| T |
48697604 |
gttccagaatggtattgcagattcttctca |
48697633 |
T |
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