View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11750_low_1 (Length: 937)

Name: NF11750_low_1
Description: NF11750
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11750_low_1
NF11750_low_1
[»] scaffold0038 (8 HSPs)
scaffold0038 (3-539)||(27330-27866)
scaffold0038 (7-548)||(42852-43401)
scaffold0038 (3-548)||(116678-117216)
scaffold0038 (3-526)||(34607-35130)
scaffold0038 (735-920)||(43494-43679)
scaffold0038 (733-921)||(27986-28173)
scaffold0038 (765-921)||(35294-35450)
scaffold0038 (736-875)||(117331-117470)
[»] chr6 (104 HSPs)
chr6 (3-539)||(28226832-28227368)
chr6 (7-548)||(28242690-28243239)
chr6 (3-542)||(28185248-28185790)
chr6 (3-548)||(28325363-28325901)
chr6 (3-541)||(28180996-28181534)
chr6 (19-498)||(28297523-28298002)
chr6 (19-498)||(28514071-28514550)
chr6 (3-526)||(28234446-28234968)
chr6 (733-921)||(28297199-28297387)
chr6 (733-921)||(28514686-28514874)
chr6 (735-920)||(28243332-28243517)
chr6 (733-921)||(28185928-28186116)
chr6 (733-921)||(28227488-28227675)
chr6 (746-921)||(28181665-28181840)
chr6 (736-919)||(28326016-28326199)
chr6 (765-921)||(28235132-28235288)
chr6 (19-357)||(27678844-27679182)
chr6 (19-357)||(27592971-27593309)
chr6 (31-357)||(27677565-27677891)
chr6 (3-357)||(27724796-27725150)
chr6 (3-380)||(28098297-28098674)
chr6 (3-358)||(27604655-27605010)
chr6 (3-357)||(27610953-27611307)
chr6 (3-357)||(27718330-27718684)
chr6 (13-466)||(26949553-26950006)
chr6 (3-357)||(27698445-27698799)
chr6 (137-357)||(27706353-27706573)
chr6 (142-452)||(27337921-27338231)
chr6 (142-452)||(27398661-27398971)
chr6 (19-450)||(31284186-31284617)
chr6 (16-323)||(25579614-25579921)
chr6 (3-320)||(26936976-26937293)
chr6 (128-297)||(28149945-28150113)
chr6 (119-262)||(26341980-26342123)
chr6 (3-398)||(26884045-26884442)
chr6 (16-256)||(26622871-26623111)
chr6 (16-256)||(26728849-26729089)
chr6 (137-312)||(26142881-26143056)
chr6 (3-398)||(26802324-26802719)
chr6 (4-323)||(28139424-28139743)
chr6 (205-444)||(27214501-27214743)
chr6 (205-444)||(27234485-27234727)
chr6 (3-323)||(28781021-28781341)
chr6 (40-295)||(26646398-26646653)
chr6 (40-295)||(26752366-26752621)
chr6 (160-302)||(26823879-26824021)
chr6 (137-261)||(25481758-25481882)
chr6 (3-451)||(28786160-28786608)
chr6 (3-451)||(28792281-28792729)
chr6 (4-343)||(29825910-29826249)
chr6 (137-311)||(25538556-25538730)
chr6 (137-323)||(26055942-26056128)
chr6 (137-323)||(26075912-26076098)
chr6 (3-249)||(26893530-26893776)
chr6 (16-457)||(25071554-25071995)
chr6 (150-323)||(26048874-26049047)
chr6 (150-323)||(26070043-26070216)
chr6 (212-456)||(26848751-26848995)
chr6 (4-466)||(26974935-26975397)
chr6 (16-256)||(26655884-26656124)
chr6 (16-256)||(26761855-26762095)
chr6 (4-466)||(26635573-26636035)
chr6 (4-466)||(26741539-26742001)
chr6 (160-472)||(26861655-26861964)
chr6 (3-224)||(27229114-27229335)
chr6 (137-297)||(2184304-2184464)
chr6 (220-323)||(26811608-26811711)
chr6 (205-466)||(26959250-26959511)
chr6 (3-256)||(27531249-27531502)
chr6 (774-864)||(26623847-26623937)
chr6 (774-864)||(26729824-26729914)
chr6 (163-357)||(27427557-27427751)
chr6 (581-672)||(28138257-28138352)
chr6 (574-670)||(30587465-30587561)
chr6 (245-455)||(26617746-26617956)
chr6 (245-455)||(26723674-26723884)
chr6 (137-261)||(2184914-2185038)
chr6 (741-864)||(28097959-28098082)
chr6 (774-864)||(26656541-26656631)
chr6 (774-864)||(26762512-26762602)
chr6 (775-864)||(29826560-29826649)
chr6 (788-868)||(31288895-31288975)
chr6 (205-256)||(27665169-27665220)
chr6 (769-864)||(27698102-27698197)
chr6 (774-864)||(25539119-25539209)
chr6 (774-864)||(26803022-26803112)
chr6 (774-864)||(31285135-31285225)
chr6 (775-864)||(26849289-26849378)
chr6 (815-868)||(26959743-26959796)
chr6 (403-476)||(28098189-28098262)
chr6 (3-68)||(28491760-28491825)
chr6 (3-68)||(29804170-29804235)
chr6 (774-834)||(26647055-26647115)
chr6 (774-834)||(26753023-26753083)
chr6 (774-864)||(26143444-26143534)
chr6 (774-864)||(27610636-27610726)
chr6 (774-864)||(27718015-27718105)
chr6 (430-476)||(28150235-28150281)
chr6 (778-835)||(25511518-25511575)
chr6 (774-835)||(25580298-25580359)
chr6 (205-242)||(26617403-26617440)
chr6 (205-242)||(26723331-26723368)
chr6 (388-457)||(26937373-26937442)
chr6 (774-827)||(27427165-27427218)
[»] scaffold0019 (2 HSPs)
scaffold0019 (3-537)||(58053-58587)
scaffold0019 (735-921)||(57753-57940)
[»] chr4 (14 HSPs)
chr4 (7-357)||(5090905-5091255)
chr4 (160-312)||(18679550-18679702)
chr4 (3-295)||(18731504-18731796)
chr4 (160-295)||(18699400-18699535)
chr4 (3-323)||(18655449-18655769)
chr4 (3-295)||(18724085-18724377)
chr4 (733-864)||(5090469-5090600)
chr4 (163-357)||(18073804-18073998)
chr4 (774-832)||(18731048-18731106)
chr4 (774-832)||(18655021-18655079)
chr4 (163-256)||(17989092-17989185)
chr4 (774-864)||(18698912-18699002)
chr4 (774-832)||(18723629-18723687)
chr4 (774-827)||(18074337-18074390)
[»] chr3 (1 HSPs)
chr3 (543-672)||(4292930-4293059)
[»] scaffold0349 (3 HSPs)
scaffold0349 (3-357)||(3372-3727)
scaffold0349 (3-357)||(14307-14660)
scaffold0349 (774-864)||(3055-3145)
[»] scaffold0277 (2 HSPs)
scaffold0277 (3-357)||(4622-4976)
scaffold0277 (3-352)||(13588-13937)
[»] chr2 (3 HSPs)
chr2 (119-344)||(3279686-3279914)
chr2 (12-457)||(17993535-17993980)
chr2 (758-916)||(3280219-3280377)
[»] chr1 (5 HSPs)
chr1 (136-381)||(28127593-28127838)
chr1 (160-323)||(268329-268492)
chr1 (155-381)||(28164277-28164502)
chr1 (774-864)||(267856-267946)
chr1 (774-835)||(28127220-28127281)
[»] scaffold0419 (1 HSPs)
scaffold0419 (3-352)||(7407-7756)
[»] chr8 (3 HSPs)
chr8 (3-240)||(31903733-31903970)
chr8 (162-261)||(29273817-29273916)
chr8 (593-669)||(8058824-8058900)
[»] chr5 (2 HSPs)
chr5 (102-344)||(16688992-16689234)
chr5 (594-669)||(12107070-12107147)
[»] scaffold1254 (1 HSPs)
scaffold1254 (3-203)||(22-222)
[»] scaffold0003 (2 HSPs)
scaffold0003 (163-357)||(59612-59806)
scaffold0003 (774-827)||(60145-60198)


Alignment Details
Target: scaffold0038 (Bit Score: 341; Significance: 0; HSPs: 8)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 341; E-Value: 0
Query Start/End: Original strand, 3 - 539
Target Start/End: Original strand, 27330 - 27866
Alignment:
Q  3 attcacctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacacc 102  Q
    ||||||||| || ||||||||||||||||||||||  |||||||| || |||||||||||||||||| |||  ||||||||||||||||||||||||||     
T  27330 attcacctatgacgtgttccttagttttagaggtattgacactcgttatggttttactggaaatctctacagtgatctttgtaagaagggaattcacaca 27429  T
Q  103 ttcattgataacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatca 202  Q
    ||| ||||| | | | ||||||| ||||||||  |||||||| ||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||    
T  27430 ttctttgatgatagagagcttcaaggaggtgatgaaataacatcatcacttttcaaggtcattgaagaatctaggattttcattcctgtcttgtctatca 27529  T
Q  203 attatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtgga 302  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||| ||||||| ||||||||||||||||||||||||||    
T  27530 attatgcttcttcttcattttgcttggacgaacttgtccacatcattcattgcttcaaggaaaatcggcgccttgttttgccaattttctatgatgtgga 27629  T
Q  303 accttctcacgtgcgacatcacaagggcagttatggtaaagcactggctgagcatattgacaggttccaaaataacaaggatagtatggagaggtttctg 402  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||| || |||||||||||||||||| |||| ||||| ||||| | |    
T  27630 accttctcatgtgcgacatcacaagggcagttatggtaaagcactggatgatcatatagagaggttccaaaataacaagcatagcatggataggttgcag 27729  T
Q  403 aaatggaagagtgctcttactcaaactgctaacttctctggccaccatttcaatcctaggtacctcacttcacttatgttttacattcttacatatatca 502  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||  | |||||| ||||||||||||||||||||| |||    
T  27730 aaatggaagattgctcttactcaaactgctaacttctctggccaccaaatcaatcctaggtaccgtagttcactcatgttttacattcttacatatgtca 27829  T
Q  503 catttctttaattttctattttctaactgtttcatct 539  Q
     | ||||||||| ||||||||||||||| ||||||||    
T  27830 tacttctttaatattctattttctaactatttcatct 27866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 7 - 548
Target Start/End: Original strand, 42852 - 43401
Alignment:
Q  7 acctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacaccttca 106  Q
    ||||| ||||| |||||||||||||||||||| |||||||| || |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  42852 acctatgatgtcttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaagaagggaattcgcaccttca 42951  T
Q  107 ttgataacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaatta 206  Q
    ||||| ||| | | ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  42952 ttgatgacagagaacttccaggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaatta 43051  T
Q  207 tgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtggaacct 306  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  43052 tgcttcttcttcattttgcttggacgaacttgtccacatcattcactgctgcaagaaaaatggacgcctagttttgccaattttctatgatgtggaacct 43151  T
Q  307 tctcacgtgcgacatcacaagggcagttatggtaaagcactggctgagcatattgacaggttccaaaataacaaggatagtatggagaggtttctgaaat 406  Q
    ||| ||||| ||||||| |  ||||||||||||||||||||||||||||||||||| | ||||||||||| || |||||  ||||||||||| | |||||    
T  43152 tctaacgtgagacatcagattggcagttatggtaaagcactggctgagcatattgagaagttccaaaatagcacggataacatggagaggttgcagaaat 43251  T
Q  407 ggaagagtgctcttactcaaactgctaacttctctggccaccatttcaatcctaggtacctcacttcacttatgtt--------ttacattcttacatat 498  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||| | ||||||||  ||||| ||| |||||        ||||||  ||||||||    
T  43252 ggaagagtgctctaactcaaacagctaacttctctggccaccatttcagttctaggtacaccacttaactcatgtttagcattcttacatagttacatat 43351  T
Q  499 atcacatttctttaattttctattttctaactgtttcatcttacaattga 548  Q
    | |||||||||||||||||||||||||||||   ||||||||||| ||||    
T  43352 aacacatttctttaattttctattttctaaccaattcatcttacagttga 43401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 3 - 548
Target Start/End: Original strand, 116678 - 117216
Alignment:
Q  3 attcacctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacacc 102  Q
    ||||||||| || ||||||||||||||||||||||| |||||||| || |||||||||||||||||| ||||||||||||||| |||| ||||||  |||    
T  116678 attcacctatgacgtgttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaggaagagaattcgtacc 116777  T
Q  103 ttcattgataacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatca 202  Q
    ||||||||| ||||| | |||||  |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||  | ||||||||||    
T  116778 ttcattgatgacaaagaccttcaacgaggtgacgaaataacaccgtcacttttcaaggccattgaagagtctaggattttcattcctattttgtctatca 116877  T
Q  203 attatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtgga 302  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||| |||| ||||||| ||||||||    
T  116878 attatgcttcttcttccttttgcttggatgaacttgtccacattattcactgcttcaaagaaaatgggcgcctagtttagccagttttctacgatgtgga 116977  T
Q  303 accttctcacgtgcgacatcacaagggcagttatggtaaagcactggctgagcatattgacaggttccaaaataacaaggatagtatggagaggtttctg 402  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    |||| || |||||| ||||||||||| | |    
T  116978 accttctcacgtgcgacatcacaagggcagttatggtaaagcactggccgagcatattgagaggtt----aatagcacggatagcatggagaggttgcag 117073  T
Q  403 aaatggaagagtgctcttactcaaactgctaacttctctggccaccatttcaatcctaggtacctcacttcacttatgttttacattcttacatatatca 502  Q
    ||||||||||  |||||||||||||||||||||||||| ||||||||||||| |||| |||| |  |||| ||| |||||||   |||||||||||||      
T  117074 aaatggaagatggctcttactcaaactgctaacttctcaggccaccatttcagtcctgggtaacctacttaactaatgttttgtgttcttacatatat-- 117171  T
Q  503 catttctttaattttctattttctaactgtttcatcttacaattga 548  Q
     |||||||||||||||||||||||||| | ||||||||||| ||||    
T  117172 -atttctttaattttctattttctaaccgattcatcttacagttga 117216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #4
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 3 - 526
Target Start/End: Original strand, 34607 - 35130
Alignment:
Q  3 attcacctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacacc 102  Q
    ||||||||| || ||||||||||||||||||||||| ||||||||||| |||||||| | ||||||| | | || ||||||| | |||||||| ||||||    
T  34607 attcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccgaaaatctctatagagctctttgtcacaagggaatccacacc 34706  T
Q  103 ttcattgataacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatca 202  Q
    ||||||||| |||   ||||||| ||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  34707 ttcattgatgacagggagcttcaaggaggagatgaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatca 34806  T
Q  203 attatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtgga 302  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||  ||||| |||||||||||||||||||||||||||||    
T  34807 attatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgcttcaaggaaagcgggcgtctagttttgccaattttctatgatgtgga 34906  T
Q  303 accttctcacgtgcgacatcacaagggcagttatggtaaagcactggctgagcatattgacaggttccaaaataacaaggatagtatggagaggtttctg 402  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||  | | ||||||||||||||||||||  ||||||||||| | |    
T  34907 accttctcacgtgcgacatcacaagggcagttatggtaaagcactggatgatcatataaagaagttccaaaataacaaggataacatggagaggttgcag 35006  T
Q  403 aaatggaagagtgctcttactcaaactgctaacttctctggccaccatttcaatcctaggtacctcacttcacttatgttttacattcttacatatatca 502  Q
    ||||||||||  ||||||||||||||  ||||||| ||||||||||||||||||||  |||||  || ||| || || |||| ||||| |||| |||| |    
T  35007 aaatggaagatggctcttactcaaacatctaacttttctggccaccatttcaatccagggtacaccaattccctcatatttttcattcatacaaatataa 35106  T
Q  503 catttctttaattttctattttct 526  Q
      ||||||||||| ||||||||||    
T  35107 tgtttctttaattctctattttct 35130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #5
Raw Score: 130; E-Value: 7e-67
Query Start/End: Original strand, 735 - 920
Target Start/End: Original strand, 43494 - 43679
Alignment:
Q  735 tgatgcatttactcaatcttttttgattgggtaggagtggatatgaatacgagtttattgagaagatagtcaaatatgtatccaacaagatcaatcgtgt 834  Q
    |||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||| ||| |||||||||||    
T  43494 tgatgcatttactcaaacttatttgattgggtaggaatggatatgaatacgagtttattgagaagatagtaaaatatttatccagcaaaatcaatcgtgt 43593  T
Q  835 tcctttatatgttgctgattaccctgttggtctcgagtctagggtcctaaaagtaaattcatttttggatgttggatctaatggtg 920  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| | ||||| ||||||| |||||    
T  43594 tcctctatatgttgctgattaccctgttggtctcgagtctagggtcctaaaagtaaataaatttcttgatgtcggatctactggtg 43679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #6
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 733 - 921
Target Start/End: Original strand, 27986 - 28173
Alignment:
Q  733 tgtgatgcatttactcaatcttttttgattgggtaggagtggatatgaatacgagtttattgagaagatagtcaaatatgtatccaacaagatcaatcgt 832  Q
    ||||||||||||||||||  || ||||||||||||||| ||| ||||||| ||||||||| |||||||||||||||||| |||| ||||||||||||| |    
T  27986 tgtgatgcatttactcaaa-ttatttgattgggtaggaatggctatgaatgcgagtttatcgagaagatagtcaaatatatatctaacaagatcaatcat 28084  T
Q  833 gttcctttatatgttgctgattaccctgttggtctcgagtctagggtcctaaaagtaaattcatttttggatgttggatctaatggtga 921  Q
    ||||||||| ||||||| ||||||||||||||| | || |||||||||||||||||||||||| || ||||||||||||||||||||||    
T  28085 gttcctttacatgttgccgattaccctgttggtgttgaatctagggtcctaaaagtaaattcacttatggatgttggatctaatggtga 28173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #7
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 765 - 921
Target Start/End: Original strand, 35294 - 35450
Alignment:
Q  765 gtaggagtggatatgaatacgagtttattgagaagatagtcaaatatgtatccaacaagatcaatcgtgttcctttatatgttgctgattaccctgttgg 864  Q
    |||||| ||||||||||||| ||| |||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||    
T  35294 gtaggaatggatatgaatacaagtatattaagaagatagtcaaatatgtatcaaacaagatcaatcatgttcctttatatgttgccgattaccctgttgg 35393  T
Q  865 tctcgagtctagggtcctaaaagtaaattcatttttggatgttggatctaatggtga 921  Q
    |||| ||||||||||||||||||||| ||||| | ||||||||||||||||||||||    
T  35394 tctcaagtctagggtcctaaaagtaacttcatgtgtggatgttggatctaatggtga 35450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #8
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 736 - 875
Target Start/End: Original strand, 117331 - 117470
Alignment:
Q  736 gatgcatttactcaatcttttttgattgggtaggagtggatatgaatacgagtttattgagaagatagtcaaatatgtatccaacaagatcaatcgtgtt 835  Q
    ||||||||||||||| ||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||| ||  ||||||| | |||||    
T  117331 gatgcatttactcaaacttatttgattgggtaggaatggctatgaatacgagtttattgagaagatagtcaaatacgtattcaggaagatcagttgtgtt 117430  T
Q  836 cctttatatgttgctgattaccctgttggtctcgagtcta 875  Q
    |||||||||||||| ||||||||||| |||||||||||||    
T  117431 cctttatatgttgcggattaccctgtaggtctcgagtcta 117470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 337; Significance: 0; HSPs: 104)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 3 - 539
Target Start/End: Original strand, 28226832 - 28227368
Alignment:
Q  3 attcacctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacacc 102  Q
    ||||||||| || ||||||||||||||||||||||  |||||||| || |||||||||||||||||| |||  ||||||||||||||||||||||||||     
T  28226832 attcacctatgacgtgttccttagttttagaggtattgacactcgttatggttttactggaaatctctacagtgatctttgtaagaagggaattcacaca 28226931  T
Q  103 ttcattgataacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatca 202  Q
    ||| ||||| | | | ||||||| ||||||||  |||||||| ||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||    
T  28226932 ttctttgatgatagagagcttcaaggaggtgatgaaataacatcatcacttttcaaggtcattgaagaatctaggattttcattcctgtcttgtctatca 28227031  T
Q  203 attatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtgga 302  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||| ||||||| ||||||||||||||||||||||||||    
T  28227032 attatgcttcttcttcattttgcttggacgaacttgtccacatcattcattgcttcaaggaaaatcggcgccttgttttgccaattttctatgatgtgga 28227131  T
Q  303 accttctcacgtgcgacatcacaagggcagttatggtaaagcactggctgagcatattgacaggttccaaaataacaaggatagtatggagaggtttctg 402  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||| || |||||||||||||||||| |||| ||||| ||||| | |    
T  28227132 accttctcatgtgcgacatcacaagggcagttatggtaaagcactggatgatcatatagagaggttccaaaataacaagcatagcatggataggttgcag 28227231  T
Q  403 aaatggaagagtgctcttactcaaactgctaacttctctggccaccatttcaatcctaggtacctcacttcacttatgttttacattcttacatatatca 502  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||  |||||||||||||||  | |||||| ||||||||||||||||||||| |||    
T  28227232 aaatggaagatggctcttactcaaactgctaacttctctggccaccaaatcaatcctaggtaccgtagttcactcatgttttacattcttacatatgtca 28227331  T
Q  503 catttctttaattttctattttctaactgtttcatct 539  Q
     | ||||||||| ||||||||||||||| ||||||||    
T  28227332 tacttctttaatattctattttctaactatttcatct 28227368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 7 - 548
Target Start/End: Original strand, 28242690 - 28243239
Alignment:
Q  7 acctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacaccttca 106  Q
    ||||| ||||| |||||||||||||||||||| |||||||| || |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  28242690 acctatgatgtcttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaagaagggaattcgcaccttca 28242789  T
Q  107 ttgataacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaatta 206  Q
    ||||| ||| | | ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  28242790 ttgatgacagagaacttccaggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaatta 28242889  T
Q  207 tgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtggaacct 306  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  28242890 tgcttcttcttcattttgcttggacgaacttgtccacatcattcactgctgcaagaaaaatggacgcctagttttgccaattttctatgatgtggaacct 28242989  T
Q  307 tctcacgtgcgacatcacaagggcagttatggtaaagcactggctgagcatattgacaggttccaaaataacaaggatagtatggagaggtttctgaaat 406  Q
    ||| ||||| ||||||| |  ||||||||||||||||||||||||||||||||||| | ||||||||||| || |||||  ||||||||||| | |||||    
T  28242990 tctaacgtgagacatcagattggcagttatggtaaagcactggctgagcatattgagaagttccaaaatagcacggataacatggagaggttgcagaaat 28243089  T
Q  407 ggaagagtgctcttactcaaactgctaacttctctggccaccatttcaatcctaggtacctcacttcacttatgtt--------ttacattcttacatat 498  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||| | ||||||||  ||||| ||| |||||        ||||||  ||||||||    
T  28243090 ggaagagtgctctaactcaaacagctaacttctctggccaccatttcagttctaggtacaccacttaactcatgtttagcattcttacatagttacatat 28243189  T
Q  499 atcacatttctttaattttctattttctaactgtttcatcttacaattga 548  Q
    | |||||||||||||||||||||||||||||   ||||||||||| ||||    
T  28243190 aacacatttctttaattttctattttctaaccaattcatcttacagttga 28243239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 333; E-Value: 0
Query Start/End: Original strand, 3 - 542
Target Start/End: Original strand, 28185248 - 28185790
Alignment:
Q  3 attcacctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacacc 102  Q
    ||||||||| || ||||||||||| ||||||||||| |||||||| ||  ||||||||||||||||| | | || ||||||| | |||||||| |  |||    
T  28185248 attcacctatgacgtgttccttagctttagaggtagtgacactcgttatcgttttactggaaatctcaatagagctctttgtgacaagggaatccgaacc 28185347  T
Q  103 ttcattgataacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatca 202  Q
    ||||| ||| ||| | ||||||| ||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28185348 ttcatggatgacagagagcttcaaggaggtgaagaaataacatcatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatca 28185447  T
Q  203 attatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtgga 302  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||  ||||| |||||||||||||||||||||||||||||    
T  28185448 attatgcttcttcttcattttgcttggacgaacttgtccacatcattaactgcttcaaggaaagcgggcgtctagttttgccaattttctatgatgtgga 28185547  T
Q  303 accttctcacgtgcgacatcacaagggcagttatggtaaagcactggctgagcatattgacaggttccaaaataacaaggatagtatggagaggtttctg 402  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||  | | ||||||||||||||||||||| ||||||||||| | |    
T  28185548 accttctcacgtgcgacatcacacgggcagttatggtaaagcactggatgatcatataaagaagttccaaaataacaaggatagcatggagaggttgcag 28185647  T
Q  403 aaatggaagagtgctcttactcaaactgctaacttctctggccaccatttcaatc---ctaggtacctcacttcacttatgttttacattcttacatata 499  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||   || |||||| ||||||||| |||||||||||||||||||||     
T  28185648 aaatggaagagtgctcttactcaaactgctaacttctctggccaccatttcaatcctgctgggtaccccacttcactcatgttttacattcttacatatg 28185747  T
Q  500 tcacatttctttaattttctattttctaactgtttcatcttac 542  Q
    ||| || |||||||| ||||||| ||| |||||||||||||||    
T  28185748 tcatatctctttaatattctattatcttactgtttcatcttac 28185790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 3 - 548
Target Start/End: Original strand, 28325363 - 28325901
Alignment:
Q  3 attcacctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacacc 102  Q
    ||||||||| || ||||||||||||||||||||||| |||||||| || |||||||||||||||||| ||||||||||||||| |||| ||||||  |||    
T  28325363 attcacctatgacgtgttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaggaagagaattcgtacc 28325462  T
Q  103 ttcattgataacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatca 202  Q
    ||||||||| ||||| | |||||  |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||  | ||||||||||    
T  28325463 ttcattgatgacaaagaccttcaacgaggtgacgaaataacaccgtcacttttcaaggccattgaagagtctaggattttcattcctattttgtctatca 28325562  T
Q  203 attatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtgga 302  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||| |||| ||||||| ||||||||    
T  28325563 attatgcttcttcttccttttgcttggatgaacttgtccacattattcactgcttcaaagaaaatgggcgcctagtttagccagttttctacgatgtgga 28325662  T
Q  303 accttctcacgtgcgacatcacaagggcagttatggtaaagcactggctgagcatattgacaggttccaaaataacaaggatagtatggagaggtttctg 402  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    |||| || |||||| ||||||||||| | |    
T  28325663 accttctcacgtgcgacatcacaagggcagttatggtaaagcactggccgagcatattgagaggtt----aatagcacggatagcatggagaggttgcag 28325758  T
Q  403 aaatggaagagtgctcttactcaaactgctaacttctctggccaccatttcaatcctaggtacctcacttcacttatgttttacattcttacatatatca 502  Q
    ||||||||||  |||||||||||||||||||||||||| ||||||||||||| |||| |||| |  |||| ||| |||||||   |||||||||||||      
T  28325759 aaatggaagatggctcttactcaaactgctaacttctcaggccaccatttcagtcctgggtaacctacttaactaatgttttgtgttcttacatatat-- 28325856  T
Q  503 catttctttaattttctattttctaactgtttcatcttacaattga 548  Q
     |||||||||||||||||||||||||| | ||||||||||| ||||    
T  28325857 -atttctttaattttctattttctaaccgattcatcttacagttga 28325901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 3 - 541
Target Start/End: Original strand, 28180996 - 28181534
Alignment:
Q  3 attcacctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacacc 102  Q
    ||||||||| || | ||||||||| ||||||||| | |||||||| || |||||||||||||||||| | | || ||||||| | |||||||| |  |||    
T  28180996 attcacctatgacgcgttccttagctttagaggtggtgacactcgttatggttttactggaaatctcaatagagctctttgtgacaagggaatccgaacc 28181095  T
Q  103 ttcattgataacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatca 202  Q
    ||||| ||| ||| | ||||||| ||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28181096 ttcatggatgacagagagcttcaaggaggtgaagaaataacatcatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatca 28181195  T
Q  203 attatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtgga 302  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||  ||||| |||||||||||||||||||||||||||||    
T  28181196 attatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgcttcaaggaaagcgggcgtctagttttgccaattttctatgatgtgga 28181295  T
Q  303 accttctcacgtgcgacatcacaagggcagttatggtaaagcactggctgagcatattgacaggttccaaaataacaaggatagtatggagaggtttctg 402  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| || |||||||||||||||||| |||| ||||| ||||| | |    
T  28181296 accttctcacgtgcgacatcacaagggcagttatggtaaagcactggatgatcatatagagaggttccaaaataacaagcatagcatggataggttgcag 28181395  T
Q  403 aaatggaagagtgctcttactcaaactgctaacttctctggccaccatttcaatcctaggtacctcacttcacttatgttttacattcttacatatatca 502  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||  | | |||| |||||||||||||  |||||  | |    
T  28181396 aaatggaagattgctcttactcaaactgctaacttctctggccaccaaatcaatcctaggtaccgtagtgcactcatgttttacattcaaacataggtga 28181495  T
Q  503 catttctttaattttctattttctaactgtttcatctta 541  Q
     ||||||| ||| |||||||||| |||||||| ||||||    
T  28181496 tatttcttgaatgttctattttcgaactgttttatctta 28181534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 292; E-Value: 1e-163
Query Start/End: Original strand, 19 - 498
Target Start/End: Complemental strand, 28298002 - 28297523
Alignment:
Q  19 ttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacaccttcattgataacaaaa 118  Q
    ||||| |||||||||||||| ||||| |||||| |||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||| |     
T  28298002 ttcctaagttttagaggtagtgacacacgctacagttttattggaaatctccacaaagatctttgtaggaagggaattcgcaccttcattgatgacagag 28297903  T
Q  119 agcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttc 218  Q
    ||||| | ||||||||| |||||||||||||||||||||||  |||||||||| |||||||||||||||| ||||| |||| ||||||||||||||||||    
T  28297902 agcttaaaggaggtgacgaaataacaccatcacttttcaagcacattgaagagactaggattttcattcctgtcttatctaccaattatgcttcttcttc 28297803  T
Q  219 attttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtggaaccttctcacgtgcga 318  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||| | | || ||||||||||| ||||| |||||||||||||||||||| ||||||    
T  28297802 attttgcttggacgaacttgtccacatcattcactgcttcaaggaaagtagccgtctagttttgccgattttttatgatgtggaaccttctcatgtgcga 28297703  T
Q  319 catcacaagggcagttatggtaaagcactggctgagcatattgacaggttccaaaataacaaggatagtatggagaggtttctgaaatggaagagtgctc 418  Q
    |||||  | || ||||||| ||||||||||| ||| ||||| || | |||||||||||||||| |||  ||||||||||| | |||||||||||||||||    
T  28297702 catcaacatggaagttatgctaaagcactggatgatcatatagagaagttccaaaataacaagaataacatggagaggttgcagaaatggaagagtgctc 28297603  T
Q  419 ttactcaaactgctaacttctctggccaccatttcaatcctaggtacctcacttcacttatgttttacattcttacatat 498  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||| ||||    
T  28297602 ttactcaaactgctaacttctctggccaccatttcaatcctaggtaccccacttcactcatgttttgcattcttaaatat 28297523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 292; E-Value: 1e-163
Query Start/End: Original strand, 19 - 498
Target Start/End: Original strand, 28514071 - 28514550
Alignment:
Q  19 ttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacaccttcattgataacaaaa 118  Q
    ||||| |||||||||||||| ||||| |||||| |||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||| |     
T  28514071 ttcctaagttttagaggtagtgacacacgctacagttttattggaaatctccacaaagatctttgtaggaagggaattcgcaccttcattgatgacagag 28514170  T
Q  119 agcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttc 218  Q
    ||||| | ||||||||| |||||||||||||||||||||||  |||||||||| |||||||||||||||| ||||| |||| ||||||||||||||||||    
T  28514171 agcttaaaggaggtgacgaaataacaccatcacttttcaagcacattgaagagactaggattttcattcctgtcttatctaccaattatgcttcttcttc 28514270  T
Q  219 attttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtggaaccttctcacgtgcga 318  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||| | | || ||||||||||| ||||| |||||||||||||||||||| ||||||    
T  28514271 attttgcttggacgaacttgtccacatcattcactgcttcaaggaaagtagccgtctagttttgccgattttttatgatgtggaaccttctcatgtgcga 28514370  T
Q  319 catcacaagggcagttatggtaaagcactggctgagcatattgacaggttccaaaataacaaggatagtatggagaggtttctgaaatggaagagtgctc 418  Q
    |||||  | || ||||||| ||||||||||| ||| ||||| || | |||||||||||||||| |||  ||||||||||| | |||||||||||||||||    
T  28514371 catcaacatggaagttatgctaaagcactggatgatcatatagagaagttccaaaataacaagaataacatggagaggttgcagaaatggaagagtgctc 28514470  T
Q  419 ttactcaaactgctaacttctctggccaccatttcaatcctaggtacctcacttcacttatgttttacattcttacatat 498  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||| ||||    
T  28514471 ttactcaaactgctaacttctctggccaccatttcaatcctaggtaccccacttcactcatgttttgcattcttaaatat 28514550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 3 - 526
Target Start/End: Original strand, 28234446 - 28234968
Alignment:
Q  3 attcacctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacacc 102  Q
    ||||||||| || ||||||||||||||||||||||| ||||||||||| |||||||| | ||||||| | | || ||||||| | |||||||| ||||||    
T  28234446 attcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccgaaaatctctatagagctctttgtcacaagggaatccacacc 28234545  T
Q  103 ttcattgataacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatca 202  Q
    ||||||||| |||   ||||||| ||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  28234546 ttcattgatgacagggagcttcaaggaggagatgaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatca 28234645  T
Q  203 attatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtgga 302  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| | |||| | |||||||| | ||||||||||||||||||||||||||||||||    
T  28234646 attatgcttcttcttcattttgcttggacgaacttgtccacatcattta-tgcttcgaggaaaatagacgcctagttttgccaattttctatgatgtgga 28234744  T
Q  303 accttctcacgtgcgacatcacaagggcagttatggtaaagcactggctgagcatattgacaggttccaaaataacaaggatagtatggagaggtttctg 402  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||  | | ||||||||||||||||||||  ||||||||||| | |    
T  28234745 accttctcacgtgcgacatcacaagggcagttatggtaaagcactggatgatcatataaagaagttccaaaataacaaggataacatggagaggttgcag 28234844  T
Q  403 aaatggaagagtgctcttactcaaactgctaacttctctggccaccatttcaatcctaggtacctcacttcacttatgttttacattcttacatatatca 502  Q
    ||||||||||  ||||||||||||||  ||||||| ||||||||||||||||||||  |||||  || ||| || || |||| ||||| |||| |||| |    
T  28234845 aaatggaagatggctcttactcaaacatctaacttttctggccaccatttcaatccagggtacaccaattccctcatatttttcattcatacaaatataa 28234944  T
Q  503 catttctttaattttctattttct 526  Q
      ||||||||||| ||||||||||    
T  28234945 tgtttctttaattctctattttct 28234968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 733 - 921
Target Start/End: Complemental strand, 28297387 - 28297199
Alignment:
Q  733 tgtgatgcatttactcaatcttttttgattgggtaggagtggatatgaatacgagtttattgagaagatagtcaaatatgtatccaacaagatcaatcgt 832  Q
    |||||||||||||||||| ||| ||||||||| ||||| |||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  28297387 tgtgatgcatttactcaaacttatttgattggataggaatggatatgaatatgagtttattgagaagatagtcaaatacgtatccagcaagatcaatcgt 28297288  T
Q  833 gttcctttatatgttgctgattaccctgttggtctcgagtctagggtcctaaaagtaaattcatttttggatgttggatctaatggtga 921  Q
    ||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||| ||||| |  |||||||||||||    
T  28297287 gttcctttatatgttgccgattaccccgttggtctccagtctagggtcctaaaagtaaattcatttctggatctcagatctaatggtga 28297199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 733 - 921
Target Start/End: Original strand, 28514686 - 28514874
Alignment:
Q  733 tgtgatgcatttactcaatcttttttgattgggtaggagtggatatgaatacgagtttattgagaagatagtcaaatatgtatccaacaagatcaatcgt 832  Q
    |||||||||||||||||| ||| ||||||||| ||||| |||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  28514686 tgtgatgcatttactcaaacttatttgattggataggaatggatatgaatatgagtttattgagaagatagtcaaatacgtatccagcaagatcaatcgt 28514785  T
Q  833 gttcctttatatgttgctgattaccctgttggtctcgagtctagggtcctaaaagtaaattcatttttggatgttggatctaatggtga 921  Q
    ||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||| ||||| |  |||||||||||||    
T  28514786 gttcctttatatgttgccgattaccccgttggtctccagtctagggtcctaaaagtaaattcatttctggatctcagatctaatggtga 28514874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 130; E-Value: 7e-67
Query Start/End: Original strand, 735 - 920
Target Start/End: Original strand, 28243332 - 28243517
Alignment:
Q  735 tgatgcatttactcaatcttttttgattgggtaggagtggatatgaatacgagtttattgagaagatagtcaaatatgtatccaacaagatcaatcgtgt 834  Q
    |||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||| ||| |||||||||||    
T  28243332 tgatgcatttactcaaacttatttgattgggtaggaatggatatgaatacgagtttattgagaagatagtaaaatatttatccagcaaaatcaatcgtgt 28243431  T
Q  835 tcctttatatgttgctgattaccctgttggtctcgagtctagggtcctaaaagtaaattcatttttggatgttggatctaatggtg 920  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| | ||||| ||||||| |||||    
T  28243432 tcctctatatgttgctgattaccctgttggtctcgagtctagggtcctaaaagtaaataaatttcttgatgtcggatctactggtg 28243517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 125; E-Value: 7e-64
Query Start/End: Original strand, 733 - 921
Target Start/End: Original strand, 28185928 - 28186116
Alignment:
Q  733 tgtgatgcatttactcaatcttttttgattgggtaggagtggatatgaatacgagtttattgagaagatagtcaaatatgtatccaacaagatcaatcgt 832  Q
    ||||||||| ||| |||| ||| ||| ||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |    
T  28185928 tgtgatgcacttaatcaaacttattttattgggtaggaatggctatgaacacgagtttattgagaagatagtcaaatatgtatctaacaagatcaatcat 28186027  T
Q  833 gttcctttatatgttgctgattaccctgttggtctcgagtctagggtcctaaaagtaaattcatttttggatgttggatctaatggtga 921  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||| || ||||| ||||||||||||||||    
T  28186028 gttcctttatatgttgctgatttccctgttggtatcgagtctagggttctaaaagtaaattcacttatggattttggatctaatggtga 28186116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 733 - 921
Target Start/End: Original strand, 28227488 - 28227675
Alignment:
Q  733 tgtgatgcatttactcaatcttttttgattgggtaggagtggatatgaatacgagtttattgagaagatagtcaaatatgtatccaacaagatcaatcgt 832  Q
    ||||||||||||||||||  || ||||||||||||||| ||| ||||||| ||||||||| |||||||||||||||||| |||| ||||||||||||| |    
T  28227488 tgtgatgcatttactcaaa-ttatttgattgggtaggaatggctatgaatgcgagtttatcgagaagatagtcaaatatatatctaacaagatcaatcat 28227586  T
Q  833 gttcctttatatgttgctgattaccctgttggtctcgagtctagggtcctaaaagtaaattcatttttggatgttggatctaatggtga 921  Q
    ||||||||| ||||||| ||||||||||||||| | || |||||||||||||||||||||||| || ||||||||||||||||||||||    
T  28227587 gttcctttacatgttgccgattaccctgttggtgttgaatctagggtcctaaaagtaaattcacttatggatgttggatctaatggtga 28227675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 746 - 921
Target Start/End: Original strand, 28181665 - 28181840
Alignment:
Q  746 ctcaatcttttttgattgggtaggagtggatatgaatacgagtttattgagaagatagtcaaatatgtatccaacaagatcaatcgtgttcctttatatg 845  Q
    ||||| ||| ||||||||||||||| |||||||||||| |||||||| || |||||||||||||| || ||||| ||||||||| |||||||||||||||    
T  28181665 ctcaaacttatttgattgggtaggaatggatatgaatatgagtttatcgaaaagatagtcaaatacgtttccaaaaagatcaattgtgttcctttatatg 28181764  T
Q  846 ttgctgattaccctgttggtctcgagtctagggtcctaaaagtaaattcatttttggatgttggatctaatggtga 921  Q
    |||| ||||||  |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  28181765 ttgccgattactatgttggtctcgagtctagggtcctaaaagtaaattcatttctggatgtcggatctaatggtga 28181840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 736 - 919
Target Start/End: Original strand, 28326016 - 28326199
Alignment:
Q  736 gatgcatttactcaatcttttttgattgggtaggagtggatatgaatacgagtttattgagaagatagtcaaatatgtatccaacaagatcaatcgtgtt 835  Q
    ||||||||||||||| ||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||| ||  ||||||| | |||||    
T  28326016 gatgcatttactcaaacttatttgattgggtaggaatggctatgaatacgagtttattgagaagatagtcaaatacgtattcaggaagatcagttgtgtt 28326115  T
Q  836 cctttatatgttgctgattaccctgttggtctcgagtctagggtcctaaaagtaaattcatttttggatgttggatctaatggt 919  Q
    |||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||||||| || | ||||||||||||||||||    
T  28326116 cctttatatgttgcggattaccctgtaggtctcgagtctaggatcctagaagtaaattcacttatagatgttggatctaatggt 28326199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 765 - 921
Target Start/End: Original strand, 28235132 - 28235288
Alignment:
Q  765 gtaggagtggatatgaatacgagtttattgagaagatagtcaaatatgtatccaacaagatcaatcgtgttcctttatatgttgctgattaccctgttgg 864  Q
    |||||| ||||||||||||| ||| |||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||    
T  28235132 gtaggaatggatatgaatacaagtatattaagaagatagtcaaatatgtatcaaacaagatcaatcatgttcctttatatgttgccgattaccctgttgg 28235231  T
Q  865 tctcgagtctagggtcctaaaagtaaattcatttttggatgttggatctaatggtga 921  Q
    |||| ||||||||||||||||||||| ||||| | ||||||||||||||||||||||    
T  28235232 tctcaagtctagggtcctaaaagtaacttcatgtgtggatgttggatctaatggtga 28235288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 19 - 357
Target Start/End: Original strand, 27678844 - 27679182
Alignment:
Q  19 ttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacaccttcattgataacaaaa 118  Q
    ||||| ||||| ||||| || |||||||| |||||||| || || |||||| |||| | ||||  | | ||||||||  |||||||||||||||| ||      
T  27678844 ttcctcagtttcagaggaagtgacactcggtacggtttcaccgggaatctctacaaggctcttactgacaagggaatcaacaccttcattgataagaatg 27678943  T
Q  119 agcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttc 218  Q
      |||||  |||| ||  |||| |||||||||||| |||||||||||||||||||||||||||| ||||| || || |||||||| ||||| ||||||||    
T  27678944 gtcttcaaagaggagatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttc 27679043  T
Q  219 attttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtggaaccttctcacgtgcga 318  Q
    |||||| ||||| ||||||||||||||||||||||||| ||||  ||| || ||||| ||| ||||  |||||| || |||||||||| ||   ||||||    
T  27679044 attttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgcctcgttctgcctgttttctttggtgtggaacctactgttgtgcga 27679143  T
Q  319 catcacaagggcagttatggtaaagcactggctgagcat 357  Q
    ||||  || || ||||||||| ||||| |||||||||||    
T  27679144 catcgtaaaggtagttatggtgaagcattggctgagcat 27679182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 19 - 357
Target Start/End: Complemental strand, 27593309 - 27592971
Alignment:
Q  19 ttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacaccttcattgataacaaaa 118  Q
    ||||| ||||| ||||| || |||||||| |||||||| || || |||||| |||| | ||||  | | ||||||||  |||||||||||||| ||||      
T  27593309 ttcctcagtttcagaggaagtgacactcggtacggtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatg 27593210  T
Q  119 agcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttc 218  Q
      |||||  ||||  |  |||| |||||||||||| |||||||||||||||||||||||||||| ||||| || || |||||||| ||||| ||||||||    
T  27593209 gtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttc 27593110  T
Q  219 attttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtggaaccttctcacgtgcga 318  Q
     ||||| ||||| ||||||| |||||||||||| |||| ||||  ||| || ||||  ||||||||  |||||| || |||||| |||||||| ||||||    
T  27593109 gttttgtttggacgaacttgaccacatcattcattgctacaagacaaagggtcgccctgttttgcctgttttctttggtgtggatccttctcatgtgcga 27593010  T
Q  319 catcacaagggcagttatggtaaagcactggctgagcat 357  Q
    ||||| || || ||||||||| ||||| |||||||||||    
T  27593009 catcataaaggtagttatggtgaagcattggctgagcat 27592971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 31 - 357
Target Start/End: Complemental strand, 27677891 - 27677565
Alignment:
Q  31 agaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacaccttcattgataacaaaaagcttcacggag 130  Q
    ||||| || |||||||| |||||||| || || |||||| |||| | ||||  | | |||||||| |||||||||||||| ||  |  | |||||  |||    
T  27677891 agaggaagtgacactcggtacggtttcaccggcaatctctacaaggctcttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagag 27677792  T
Q  131 gtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttgga 230  Q
    | ||  |||| |||||||||||| |||||||||||||||||||||||||||| ||| | || || |||||||| ||||| |||||||||||||| |||||    
T  27677791 gggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattgctgtgttttctatcaactatgcctcttcttcattttgtttgga 27677692  T
Q  231 tgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtggaaccttctcacgtgcgacatcacaagggc 330  Q
     ||||||||||||||||||||||||| ||||  ||| || ||||| ||| ||||  |||||| || |||||||||| ||   ||||||||||| || ||     
T  27677691 cgaacttgtccacatcattcactgctacaagacaaagggtcgcctcgttctgcctgttttctttgctgtggaacctactattgtgcgacatcagaaaggt 27677592  T
Q  331 agttatggtaaagcactggctgagcat 357  Q
    ||||||||| ||||| |||||||||||    
T  27677591 agttatggtgaagcattggctgagcat 27677565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 3 - 357
Target Start/End: Complemental strand, 27725150 - 27724796
Alignment:
Q  3 attcacctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacacc 102  Q
    |||||| ||| | ||||||||||||||||| || |  ||||||||  |||||||||| ||||||||| |||| | ||||  | | |||||||| || |||    
T  27725150 attcacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaatccatacc 27725051  T
Q  103 ttcattgataacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatca 202  Q
    ||||||||| ||||  | |||||  |||| ||  |||| |||||||||||  ||||||||||||| || ||||||||||| ||||| || || |||||||    
T  27725050 ttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatca 27724951  T
Q  203 attatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtgga 302  Q
    | ||||| | |||||| ||||| ||||| |||||||||||||| |||||||||| ||||  ||| || ||||| ||||||||  ||||||  |  |||||    
T  27724950 actatgcctattcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgttttgcctgttttcttcggcgtgga 27724851  T
Q  303 accttctcacgtgcgacatcacaagggcagttatggtaaagcactggctgagcat 357  Q
    |||| || ||||||||||||| || || ||||||||| ||||| |||||||||||    
T  27724850 acctactaacgtgcgacatcagaaaggtagttatggtgaagcattggctgagcat 27724796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 3 - 380
Target Start/End: Complemental strand, 28098674 - 28098297
Alignment:
Q  3 attcacctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacacc 102  Q
    ||||||||| || ||||| |||| |||||| || | ||||||||| || |||||||||||||||||| |||||| ||||||| |    ||| | | ||||    
T  28098674 attcacctatgacgtgtttcttaattttaggggcaccgacactcggtatggttttactggaaatctctacaaagctctttgtgacggaggagtccgcacc 28098575  T
Q  103 ttcattgataacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatca 202  Q
    ||||||||  | ||| | ||||| | |||||| | ||| |||| ||| ||| |||||||||| |||||||| |||||||| ||||| ||||| ||||  |    
T  28098574 ttcattgaccataaagatcttcatgaaggtgatagaatcacacaatcccttgtcaaggccatcgaagagtccaggattttaattccggtcttctctaaga 28098475  T
Q  203 attatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtgga 302  Q
    | |||||||||||||  ||||| ||||||||||||||||||||||||||| | | | | ||||| ||  || | ||||| || ||||| | ||| |||||    
T  28098474 actatgcttcttctttgttttgtttggatgaacttgtccacatcattcaccgttacgaagaaaagggttgcttcgtttttcctattttttgtgacgtgga 28098375  T
Q  303 accttctcacgtgcgacatcacaagggcagttatggtaaagcactggctgagcatattgacaggttccaaaataacaa 380  Q
    ||||||||||||||||||||| | ||| ||||||||| ||||| | ||| |||||   || |||||||||||||||||    
T  28098374 accttctcacgtgcgacatcagacggggagttatggtgaagcattagctaagcatgaagagaggttccaaaataacaa 28098297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 3 - 358
Target Start/End: Complemental strand, 27605010 - 27604655
Alignment:
Q  3 attcacctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacacc 102  Q
    |||||| ||| | ||||||||||||||||| || |  |||||||| ||||||||||| || |||||| |||| | ||||  | | ||||||||||| |||    
T  27605010 attcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttactgacaagggaattcatacc 27604911  T
Q  103 ttcattgataacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatca 202  Q
    ||||||||| | ||  | ||||   |||| ||  |||| |||||| ||||| ||||||||||||| || || |||||||| ||||| || || |||||||    
T  27604910 ttcattgatgaaaatgatcttcgaagaggagatgaaatcacaccagcacttctcaaggccattgatgaatccaggatttttattcctgtgttttctatca 27604811  T
Q  203 attatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtgga 302  Q
    | ||||| |||||||| ||||| |||||||||||||| ||||||||||| |||| || |  ||| || ||| | ||||||||  |||||| || ||||||    
T  27604810 aatatgcctcttcttccttttgtttggatgaacttgttcacatcattcattgctacacgacaaagggtcgcgtcgttttgcctgttttctttggtgtgga 27604711  T
Q  303 accttctcacgtgcgacatcacaagggcagttatggtaaagcactggctgagcata 358  Q
    ||||||||| ||||||||||| || || ||||| ||| ||||| ||||||||||||    
T  27604710 accttctcatgtgcgacatcataaaggtagttacggtcaagcattggctgagcata 27604655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 3 - 357
Target Start/End: Complemental strand, 27611307 - 27610953
Alignment:
Q  3 attcacctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacacc 102  Q
    |||||| ||| | |||||||| |||||||| || |  ||||||||| |||||||||| ||||||||| |||| | ||||  | | |||||||| || |||    
T  27611307 attcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatccatacc 27611208  T
Q  103 ttcattgataacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatca 202  Q
    ||||||||| ||||  | ||||   |||| ||  |||| |||||||||||  ||||||||||||| || ||||||||||| ||||| || || |||||||    
T  27611207 ttcattgatgacaatgatcttccaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatca 27611108  T
Q  203 attatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtgga 302  Q
    | ||||| |||||||| ||||| ||||| |||||||||||||| |||||||||| ||||  ||| || ||||| ||||||||  ||||||  |  |||||    
T  27611107 actatgcctcttcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgttttgcctgttttcttcggcgtgga 27611008  T
Q  303 accttctcacgtgcgacatcacaagggcagttatggtaaagcactggctgagcat 357  Q
    |||| || | ||||||||||| || || ||||||||| ||||| |||||||||||    
T  27611007 acctactaaagtgcgacatcagaaaggtagttatggtgaagcattggctgagcat 27610953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 3 - 357
Target Start/End: Complemental strand, 27718684 - 27718330
Alignment:
Q  3 attcacctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacacc 102  Q
    |||||| ||| | |||||||| |||||||| || |  ||||||||  || ||||||| ||||||||| |||| | ||||  | | |||||||| || |||    
T  27718684 attcacttaccaagtgttcctcagttttaggggcactgacactcggcacagttttaccggaaatctctacaaggctcttactgacaagggaatccatacc 27718585  T
Q  103 ttcattgataacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatca 202  Q
    ||||||||| ||||  | |||||  |||| ||  |||| |||||||||||  ||||||||||||| || ||||||||||| ||||| || || |||||||    
T  27718584 ttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatca 27718485  T
Q  203 attatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtgga 302  Q
    | ||||| |||||||| ||||| ||||| |||||||||||||| |||||||||| ||||  ||| || ||||| ||||||||  ||||||  |  |||||    
T  27718484 actatgcctcttcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgttttgcctgttttcttcggcgtgga 27718385  T
Q  303 accttctcacgtgcgacatcacaagggcagttatggtaaagcactggctgagcat 357  Q
    |||| || ||||||||||||| || || ||||||||| ||||| |||||||||||    
T  27718384 acctactaacgtgcgacatcagaaaggtagttatggtgaagcattggctgagcat 27718330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 13 - 466
Target Start/End: Original strand, 26949553 - 26950006
Alignment:
Q  13 gatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacaccttcattgata 112  Q
    ||||||||| ||||||| ||||||| ||||||||| | |||||| || || |||||| | |||| ||| | | | |||||||| |  ||||||||||||     
T  26949553 gatgtgttcattagtttcagaggtaccgacactcgattcggtttcaccggtaatctctataaagctctctctgacaagggaatccgaaccttcattgatg 26949652  T
Q  113 acaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttc 212  Q
    | ||  |||||||   ||||||| |||| ||||| |||||  |||||   |||||||| || || |||  ||||  |||||| ||||   | ||||||||    
T  26949653 ataaggagcttcagaaaggtgacgaaatcacaccttcactcctcaagagaattgaagaatcgagaattgccattatcgtcttttctaaggaatatgcttc 26949752  T
Q  213 ttcttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtggaaccttctcac 312  Q
    |||||||||||| || || ||||||||||| |||||||||| || ||||||||| || ||||| ||| ||||| ||||||||||||| ||||||||||||    
T  26949753 ttcttcattttgtttagacgaacttgtccatatcattcactacttcaaggaaaaaggtcgccttgttctgccagttttctatgatgtagaaccttctcac 26949852  T
Q  313 gtgcgacatcacaagggcagttatggtaaagcactggctgagcatattgacaggttccaaaataacaaggatagtatggagaggtttctgaaatggaaga 412  Q
    ||||||||||| ||    ||||||||| ||||||| ||| |||||   || ||||||||||| | |||  | |  |||||| |||| |||||||||||||    
T  26949853 gtgcgacatcagaattatagttatggtgaagcacttgctaagcatgaagagaggttccaaaagagcaaaaaaaacatggagcggttgctgaaatggaaga 26949952  T
Q  413 gtgctcttactcaaactgctaacttctctggccaccatttcaatcctaggtacc 466  Q
      ||||| |   ||  |||| |||| |||||| |||||||||||| | ||||||    
T  26949953 tagctctgaacaaagttgctgacttatctggctaccatttcaatcttgggtacc 26950006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 3 - 357
Target Start/End: Complemental strand, 27698799 - 27698445
Alignment:
Q  3 attcacctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacacc 102  Q
    |||||| ||| | |||||| | |||||||| || |  ||||||||  |||||||||| ||||||||| |||| | ||||  | | |||||||| || |||    
T  27698799 attcacttaccaagtgttcatcagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaatccatacc 27698700  T
Q  103 ttcattgataacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatca 202  Q
    ||||||||| ||||  | |||||  |||| ||  |||| |||||||||||  ||||||||||||| || ||||||||||| ||||| || || ||| |||    
T  27698699 ttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctctca 27698600  T
Q  203 attatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtgga 302  Q
    | ||||| |||||||||||||| ||||| |||||||||||||| |||||||||| | ||  ||| || ||||| ||||||||  ||||||  | ||||||    
T  27698599 actatgcatcttcttcattttgtttggacgaacttgtccacataattcactgctacgagacaaagggtcgcctcgttttgcctgttttcttcggtgtgga 27698500  T
Q  303 accttctcacgtgcgacatcacaagggcagttatggtaaagcactggctgagcat 357  Q
    |||  || | ||| ||||||| || || |||||||| |||||| |||||||||||    
T  27698499 accaactaatgtgagacatcataaaggtagttatggcaaagcattggctgagcat 27698445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 137 - 357
Target Start/End: Complemental strand, 27706573 - 27706353
Alignment:
Q  137 aaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggatgaact 236  Q
    |||| |||||||||||| |||||||||||||||||||||||||||| ||||| || || |||||||  ||||| |||||||||||||| ||||| |||||    
T  27706573 aaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaact 27706474  T
Q  237 tgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtggaaccttctcacgtgcgacatcacaagggcagttat 336  Q
    |||||||||||||||||||| ||||  ||| || ||||| ||| ||||  |||| | || ||| |||||| ||   ||||||||||  || || ||||||    
T  27706473 tgtccacatcattcactgctacaagacaaagggtcgcctcgttctgcctgttttatttggtgtagaacctactattgtgcgacatcgtaaaggtagttat 27706374  T
Q  337 ggtaaagcactggctgagcat 357  Q
    ||| ||||| |||||||||||    
T  27706373 ggtgaagcattggctgagcat 27706353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 142 - 452
Target Start/End: Complemental strand, 27338231 - 27337921
Alignment:
Q  142 acaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggatgaacttgtcc 241  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||| | || |||   || ||||| |||||||||||||||||||| ||||||||||    
T  27338231 acaccatcacttgtcaaggccattgaagagtctaggattttgattcccatattttctgcaaactatgcatcttcttcattttgcttggacgaacttgtcc 27338132  T
Q  242 acatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtggaaccttctcacgtgcgacatcacaagggcagttatggtaa 341  Q
    ||||||||||||||| ||||  ||  ||  |    ||||||||  ||||||||| || ||| ||| ||||||| |||||||| |  || |||||||||      
T  27338131 acatcattcactgctacaagacaaggggttgttcggttttgcctgttttctatggtgcggatcctactcacgtacgacatcagactgggagttatggt-g 27338033  T
Q  342 agca-ctggctgagcatattgacaggttccaaaataacaaggatagtatggagaggtttctgaaatggaagagtgctcttactcaaactgctaacttctc 440  Q
    |||| ||  || |||||   || | |||||||||||||||||| |  |||||||||||   |||||||||||  |||||||| ||| |||||||||||||    
T  27338032 agcatcttactaagcatgaagataagttccaaaataacaaggaaaacatggagaggttgaagaaatggaagatggctcttacccaagctgctaacttctc 27337933  T
Q  441 tggccaccattt 452  Q
     |||||||||||    
T  27337932 cggccaccattt 27337921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 142 - 452
Target Start/End: Complemental strand, 27398971 - 27398661
Alignment:
Q  142 acaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggatgaacttgtcc 241  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||| | || |||   || ||||| |||||||||||||||||||| ||||||||||    
T  27398971 acaccatcacttgtcaaggccattgaagagtctaggattttgattcccatattttctgcaaactatgcatcttcttcattttgcttggacgaacttgtcc 27398872  T
Q  242 acatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtggaaccttctcacgtgcgacatcacaagggcagttatggtaa 341  Q
    ||||||||||||||| ||||  ||  ||  |    ||||||||  ||||||||| || ||| ||| ||||||| |||||||| |  || |||||||||      
T  27398871 acatcattcactgctacaagacaaggggttgttcggttttgcctgttttctatggtgcggatcctactcacgtacgacatcagactgggagttatggt-g 27398773  T
Q  342 agca-ctggctgagcatattgacaggttccaaaataacaaggatagtatggagaggtttctgaaatggaagagtgctcttactcaaactgctaacttctc 440  Q
    |||| ||  || |||||   || | |||||||||||||||||| |  |||||||||||   |||||||||||  |||||||| ||| |||||||||||||    
T  27398772 agcatcttactaagcatgaagataagttccaaaataacaaggaaaacatggagaggttgaagaaatggaagatggctcttacccaagctgctaacttctc 27398673  T
Q  441 tggccaccattt 452  Q
     |||||||||||    
T  27398672 cggccaccattt 27398661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 19 - 450
Target Start/End: Original strand, 31284186 - 31284617
Alignment:
Q  19 ttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacaccttcattgataacaaaa 118  Q
    ||||||||||| || || || |||||||| || ||||| || || |||||| |||| | ||||  | | |||||||| ||||||||||||||| | |       
T  31284186 ttccttagtttcaggggaagtgacactcggtatggtttcaccggcaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatagtg 31284285  T
Q  119 agcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttc 218  Q
    | |||||  |||| ||  |||| |||||||||||   ||| ||||||||||||||||||||||| || ||||| || |||  ||| ||||| ||||| ||    
T  31284286 aacttcaaagaggggatgaaatcacaccatcactcgacaatgccattgaagagtctaggatttttatccccgtgttttctgccaactatgcctcttcgtc 31284385  T
Q  219 attttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtggaaccttctcacgtgcga 318  Q
     ||||| ||||| ||||||||||||||||||||||  |  ||| ||||||| ||||| ||||||||  |||||| ||  ||||| |||||||| ||||||    
T  31284386 gttttgtttggacgaacttgtccacatcattcacttgtataagcaaaatggtcgcctcgttttgcccgttttctttggcgtggatccttctcatgtgcga 31284485  T
Q  319 catcacaagggcagttatggtaaagcactggctgagcatattgacaggttccaaaataacaaggatagtatggagaggtttctgaaatggaagagtgctc 418  Q
    ||||| |  || ||||||||  ||||| ||||| |||||   || ||||||||| |||| |  |||  |||||| ||||| |  ||||||||||  ||||    
T  31284486 catcatagaggtagttatggagaagcattggctaagcatgaagagaggttccaacataatacagatcatatggaaaggttgcaaaaatggaagatagctc 31284585  T
Q  419 ttactcaaactgctaacttctctggccaccat 450  Q
    |||||||| | |||||||| |||||| |||||    
T  31284586 ttactcaagcagctaacttgtctggcgaccat 31284617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 16 - 323
Target Start/End: Original strand, 25579614 - 25579921
Alignment:
Q  16 gtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacaccttcattgataaca 115  Q
    |||||||| ||||| ||||| || ||||||||| ||  |||||| || |||||| | || | ||||  | | ||||||||||  |||||| ||||| | |    
T  25579614 gtgttcctcagtttcagaggcagtgacactcgcaacacttttaccggtaatctctataaggctcttgttgacaagggaattcgtaccttctttgatgata 25579713  T
Q  116 aaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttc 215  Q
    |  | |||||  |||| ||  |||| |||||||||||| |||||||||||||||| ||||||||||| |||||| | || |||  ||| ||||| |||||    
T  25579714 atgatcttcaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttttattcccatattttctgccaactatgcatcttc 25579813  T
Q  216 ttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtggaaccttctcacgtg 315  Q
    ||||||||| ||||| ||||||||||||||||||||||||| ||||  |||  |  || |||| |||||  |||||||||||||||||||| ||||| |     
T  25579814 ttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagagttgcttagtattgcccgttttctatgatgtggaacctactcacata 25579913  T
Q  316 cgacatca 323  Q
    ||||||||    
T  25579914 cgacatca 25579921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 3 - 320
Target Start/End: Original strand, 26936976 - 26937293
Alignment:
Q  3 attcacctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacacc 102  Q
    ||||||||| || |||||||| ||||| ||||| | ||||||||||| |  ||||| |||  ||||  |||||| ||||||| |    ||||||| ||||    
T  26936976 attcacctatgacgtgttcctcagtttcagaggcaccgacactcgcttccattttattggtcatctttacaaagctctttgtgattgtggaattcgcacc 26937075  T
Q  103 ttcattgataacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatca 202  Q
    ||||||||| ||||  |||| || ||||| ||  |||| |||||||||||| ||||||| |||||||| ||  |||||  ||| || || || |||||||    
T  26937076 ttcattgatgacaaggagctccatggaggagaagaaatcacaccatcacttgtcaaggcaattgaagattccgggattgccatacctgtattctctatca 26937175  T
Q  203 attatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtgga 302  Q
    | |||||  ||||||||||||| ||||| ||||||||||||||| || |||||| ||||  ||| || |  ||| ||||||| ||||||||||| |||||    
T  26937176 actatgccacttcttcattttgtttggacgaacttgtccacatcgttgactgcttcaagacaaaaggtcatctaattttgcctattttctatgaagtgga 26937275  T
Q  303 accttctcacgtgcgaca 320  Q
     ||||||||||| |||||    
T  26937276 tccttctcacgttcgaca 26937293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 128 - 297
Target Start/End: Original strand, 28149945 - 28150113
Alignment:
Q  128 gaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgctt 227  Q
    |||| ||| |||| ||||||||||| | |||||||||||||||||| ||||||||||||||  |||| |||||||| ||| |||||||||||||||| ||    
T  28149945 gaggggacgaaatcacaccatcactct-caaggccattgaagagtccaggattttcattccaatcttctctatcaactatacttcttcttcattttgttt 28150043  T
Q  228 ggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgat 297  Q
    ||| |||||||||||||| |||||||||| ||||| ||| ||  || ||||| |||| ||||||||||||    
T  28150044 ggacgaacttgtccacattattcactgcttcaaggcaaagggttgcttagttctgcctattttctatgat 28150113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 119 - 262
Target Start/End: Complemental strand, 26342123 - 26341980
Alignment:
Q  119 agcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttc 218  Q
    ||||||| |||||||||||||| |||| ||||||| |||| |||||||||||||| ||||||||||||||  | || || ||||| ||||||||||||||    
T  26342123 agcttcatggaggtgacaaaatcacacaatcacttgtcaaagccattgaagagtccaggattttcattccaattttctcaatcaactatgcttcttcttc 26342024  T
Q  219 attttgcttggatgaacttgtccacatcattcactgctccaagg 262  Q
     ||||| ||||| |||||||||||||||||||| |||| |||||    
T  26342023 gttttgtttggacgaacttgtccacatcattcattgcttcaagg 26341980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 3 - 398
Target Start/End: Original strand, 26884045 - 26884442
Alignment:
Q  3 attcacctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacacc 102  Q
    |||||| ||| | |||||||| ||||| ||||| || |||||||| || ||||| |||||||||||| |||| | ||||  ||| |||||||| ||||||    
T  26884045 attcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctcttactaacaagggaatccacacc 26884144  T
Q  103 ttcattgataacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatca 202  Q
    ||||||||| | ||  | ||||   ||||   | |||| |||||||||||  |||||||||||||||| ||||| ||||| |||||  | || |||| ||    
T  26884145 ttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattccaatattttctacca 26884244  T
Q  203 attatgcttcttcttcattttgcttggatgaacttgtccaca--tcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtg 300  Q
    | ||||| |||||||||||||| ||||| |||||||||||||  |||||||||||| | ||  ||| || ||||| ||||||||  ||||   || ||||    
T  26884245 actatgcatcttcttcattttgtttggacgaacttgtccacatgtcattcactgctacgagacaaagggtcgcctcgttttgcctgtttttgttggtgtg 26884344  T
Q  301 gaaccttctcacgtgcgacatcacaagggcagttatggtaaagcactggctgagcatattgacaggttccaaaataacaaggatagtatggagaggtt 398  Q
    || ||| || | ||||||||||| |  || ||||||||| ||||| ||||||| |||    | ||||| |||||| | |||||||  |||||||||||    
T  26884345 gatcctactgatgtgcgacatcatacaggtagttatggtgaagcattggctgaccatgaaaaaaggtttcaaaatgataaggataacatggagaggtt 26884442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 16 - 256
Target Start/End: Original strand, 26622871 - 26623111
Alignment:
Q  16 gtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacaccttcattgataaca 115  Q
    |||||||| ||||| ||||| || |||||||| |||||||| |||||||||||| |||| | ||||  | | |||||||| ||||||||||||||| |      
T  26622871 gtgttcctaagtttcagaggcagtgacactcggtacggtttcactggaaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatc 26622970  T
Q  116 aaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttc 215  Q
       | |||||  |||| ||| |||| | ||||||||||  ||| || || ||||||||||||||||| ||||| || || |||  ||| ||||| | |||    
T  26622971 gtgaacttcaaagaggggacgaaatcaaaccatcacttgacaatgctatcgaagagtctaggatttttattcctgtgttttctcccaactatgcatattc 26623070  T
Q  216 ttcattttgcttggatgaacttgtccacatcattcactgct 256  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  26623071 ttcattttgtttggatgaacttgtccacatcattcactgct 26623111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 16 - 256
Target Start/End: Original strand, 26728849 - 26729089
Alignment:
Q  16 gtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacaccttcattgataaca 115  Q
    |||||||| ||||| ||||| || |||||||| |||||||| |||||||||||| |||| | ||||  | | |||||||| ||||||||||||||| |      
T  26728849 gtgttcctaagtttcagaggcagtgacactcggtacggtttcactggaaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatc 26728948  T
Q  116 aaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttc 215  Q
       | |||||  |||| ||| |||| | ||||||||||  ||| || || ||||||||||||||||| ||||| || || |||  ||| ||||| | |||    
T  26728949 gtgaacttcaaagaggggacgaaatcaaaccatcacttgacaatgctatcgaagagtctaggatttttattcctgtgttttctcccaactatgcatattc 26729048  T
Q  216 ttcattttgcttggatgaacttgtccacatcattcactgct 256  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  26729049 ttcattttgtttggatgaacttgtccacatcattcactgct 26729089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 137 - 312
Target Start/End: Original strand, 26142881 - 26143056
Alignment:
Q  137 aaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggatgaact 236  Q
    |||| |||||||||||| |||||||||||||||| ||||||||||| |||||| | || |||  ||| ||||| |||||||||||||| ||||| |||||    
T  26142881 aaatcacaccatcacttgtcaaggccattgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaact 26142980  T
Q  237 tgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtggaaccttctcac 312  Q
    |||||||||||||||||||| ||||  |||  |  || |||| || ||  |||||||||||||||||||| |||||    
T  26142981 tgtccacatcattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcac 26143056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 3 - 398
Target Start/End: Original strand, 26802324 - 26802719
Alignment:
Q  3 attcacctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacacc 102  Q
    |||||| ||| | |||||||| |||||||| || |  |||||||| ||||||||||| || |||||| |||| | ||||  | | |||||||| || |||    
T  26802324 attcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaagggaatccatacc 26802423  T
Q  103 ttcattgataacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatca 202  Q
    ||||||||| ||||  | |||||  |||| ||  |||| |||||||||||  |||||||||||||||| ||||| ||||| ||||| || || |||||||    
T  26802424 ttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctagaatttttattcctgtgttttctatca 26802523  T
Q  203 attatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtgga 302  Q
    | ||||| |||||   |||||||||||| |||||||| ||||| ||||| ||||  |||  ||| || ||||| || ||||| ||||||| || ||||||    
T  26802524 actatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgtcttgcctattttctttggtgtgga 26802623  T
Q  303 accttctcacgtgcgacatcacaagggcagttatggtaaagcactggctgagcatattgacaggttccaaaataacaaggatagtatggagaggtt 398  Q
     ||| || | ||||| ||||| |   | || |||||| ||||| |||||||||||    | ||||| |||||| | |||||||  |||||||||||    
T  26802624 tcctactaatgtgcgccatcatacatgtagctatggtgaagcattggctgagcatgaaaaaaggtttcaaaatgataaggataacatggagaggtt 26802719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 4 - 323
Target Start/End: Original strand, 28139424 - 28139743
Alignment:
Q  4 ttcacctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacacct 103  Q
    ||||| |||||||| || || || || ||||| || |||||||| | |||||| |||||||||||| |||||| |||| || |    ||||| ||||| |    
T  28139424 ttcacatacgatgtctttctcagcttcagaggcagtgacactcgtttcggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacactt 28139523  T
Q  104 tcattgataacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaa 203  Q
    | |||||| | |   ||||||| ||||||||| ||||| |||| |||||  | || ||||||||||| |||||||||||||| || || || || |||||    
T  28139524 ttattgatgatagggagcttcaaggaggtgacgaaatatcaccgtcactcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaa 28139623  T
Q  204 ttatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtggaa 303  Q
     ||||| |||||||| ||||||||||| |||||||||||||||||| |||||| |||   ||| ||  |  | ||||||||  ||||||||| ||||||     
T  28139624 ctatgcctcttcttcgttttgcttggacgaacttgtccacatcattgactgcttcaacacaaagggatgtttggttttgcctgttttctatggtgtggat 28139723  T
Q  304 ccttctcacgtgcgacatca 323  Q
    ||||||||| | ||||||||    
T  28139724 ccttctcacattcgacatca 28139743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 205 - 444
Target Start/End: Original strand, 27214501 - 27214743
Alignment:
Q  205 tatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtggaac 304  Q
    |||||| ||||||||||||| ||||| |||||||||||||||| ||| |||||||||||||| || ||||| ||| | ||  |||||||||  || ||||    
T  27214501 tatgctacttcttcattttgtttggacgaacttgtccacatcactcattgctccaaggaaaaaggtcgccttgttctacctgttttctatggcgttgaac 27214600  T
Q  305 cttctcacgtgcgacatc---acaagggcagttatggtaaagcactggctgagcatattgacaggttccaaaataacaaggatagtatggagaggtttct 401  Q
    |||||||| |||||||||   ||||   |||||||||| |||| || ||| |||||   || ||||| |||||||||||||| |  |||||| |||| |     
T  27214601 cttctcacttgcgacatctgaacaacaacagttatggtgaagcgcttgctaagcatgaagagaggtttcaaaataacaaggaaaacatggagcggttgca 27214700  T
Q  402 gaaatggaagagtgctcttactcaaactgctaacttctctggc 444  Q
    |||||||||||  |||||||  ||| |||||||||| ||||||    
T  27214701 gaaatggaagatagctcttaaccaagctgctaacttatctggc 27214743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 205 - 444
Target Start/End: Complemental strand, 27234727 - 27234485
Alignment:
Q  205 tatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtggaac 304  Q
    |||||| ||||||||||||| ||||| |||||||||||||||| ||| |||||||||||||| || ||||| ||| | ||  |||||||||  || ||||    
T  27234727 tatgctacttcttcattttgtttggacgaacttgtccacatcactcattgctccaaggaaaaaggtcgccttgttctacctgttttctatggcgttgaac 27234628  T
Q  305 cttctcacgtgcgacatc---acaagggcagttatggtaaagcactggctgagcatattgacaggttccaaaataacaaggatagtatggagaggtttct 401  Q
    |||||||| |||||||||   ||||   |||||||||| |||| || ||| |||||   || ||||| |||||||||||||| |  |||||| |||| |     
T  27234627 cttctcacttgcgacatctgaacaacaacagttatggtgaagcgcttgctaagcatgaagagaggtttcaaaataacaaggaaaacatggagcggttgca 27234528  T
Q  402 gaaatggaagagtgctcttactcaaactgctaacttctctggc 444  Q
    |||||||||||  |||||||  ||| |||||||||| ||||||    
T  27234527 gaaatggaagatagctcttaaccaagctgctaacttatctggc 27234485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 3 - 323
Target Start/End: Original strand, 28781021 - 28781341
Alignment:
Q  3 attcacctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacacc 102  Q
    |||||| ||| | |||||||| |||||||| || |  ||||||||| |||||||||| || |||||| |||| | ||||  | | ||||||||  | |||    
T  28781021 attcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaacc 28781120  T
Q  103 ttcattgataacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatca 202  Q
    ||||||||| ||||  | |||||  |||| ||  |||| |||||||||||  |||||||||| ||||| ||||||||||| ||||| || || |||||||    
T  28781121 ttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatca 28781220  T
Q  203 attatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtgga 302  Q
    | |||||  ||||   |||||||||||| |||||||| ||||| ||||| |||| ||||  ||| || ||||| ||||||||  |||||| || ||||||    
T  28781221 actatgccacttcaaaattttgcttggacgaacttgttcacattattcattgctacaagacaaaaggtcgcctcgttttgcctgttttctttggtgtgga 28781320  T
Q  303 accttctcacgtgcgacatca 323  Q
     ||| || | |||||||||||    
T  28781321 tcctactaatgtgcgacatca 28781341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 40 - 295
Target Start/End: Original strand, 26646398 - 26646653
Alignment:
Q  40 gacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacaccttcattgataacaaaaagcttcacggaggtgacaaaa 139  Q
    ||||||||  |||||||||||||| ||||| |||| | ||||  | | |||||||||||||||||||||||| |     | ||| |  |||| ||  |||    
T  26646398 gacactcgtgacggttttactggacatctctacaaggctcttactgacaagggaattcacaccttcattgatgattgtgatcttaagagaggagatgaaa 26646497  T
Q  140 taacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggatgaacttgt 239  Q
    | |||||||||||  |||||||||||||||| ||||||||||| ||||| || || |||||||| ||||| ||||||  |||||| ||||| ||||||||    
T  26646498 tcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttctaaattttgtttggacgaacttgt 26646597  T
Q  240 ccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatg 295  Q
    |||||||||||| |||| ||||  ||| || || || ||||||||  |||||||||    
T  26646598 ccacatcattcattgctacaagacaaagggtcgtctcgttttgcccgttttctatg 26646653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 40 - 295
Target Start/End: Original strand, 26752366 - 26752621
Alignment:
Q  40 gacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacaccttcattgataacaaaaagcttcacggaggtgacaaaa 139  Q
    ||||||||  |||||||||||||| ||||| |||| | ||||  | | |||||||||||||||||||||||| |     | ||| |  |||| ||  |||    
T  26752366 gacactcgtgacggttttactggacatctctacaaggctcttactgacaagggaattcacaccttcattgatgattgtgatcttaagagaggagatgaaa 26752465  T
Q  140 taacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggatgaacttgt 239  Q
    | |||||||||||  |||||||||||||||| ||||||||||| ||||| || || |||||||| ||||| ||||||  |||||| ||||| ||||||||    
T  26752466 tcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttctaaattttgtttggacgaacttgt 26752565  T
Q  240 ccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatg 295  Q
    |||||||||||| |||| ||||  ||| || || || ||||||||  |||||||||    
T  26752566 ccacatcattcattgctacaagacaaagggtcgtctcgttttgcccgttttctatg 26752621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 160 - 302
Target Start/End: Original strand, 26823879 - 26824021
Alignment:
Q  160 gccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctcca 259  Q
    ||||||||||||||||||||||| ||||| || || |||  ||| ||||| |||||||||||||| ||||| ||||||||||||||||||| |  || ||    
T  26823879 gccattgaagagtctaggatttttattcctgtgttttctgccaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcgcgtctaca 26823978  T
Q  260 aggaaaatgggcgcctagttttgccaattttctatgatgtgga 302  Q
    ||||||| |||||||| ||||||||  ||||||||| ||||||    
T  26823979 aggaaaaggggcgcctcgttttgcctgttttctatggtgtgga 26824021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 137 - 261
Target Start/End: Original strand, 25481758 - 25481882
Alignment:
Q  137 aaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggatgaact 236  Q
    |||| |||||||||||| |||||||||||||||| ||||||||||  |||||| | || |||  ||| ||||| |||||||||||||| ||||| |||||    
T  25481758 aaatcacaccatcacttgtcaaggccattgaagaatctaggatttgtattcccatattttctgccaactatgcatcttcttcattttgtttggacgaact 25481857  T
Q  237 tgtccacatcattcactgctccaag 261  Q
    |||||||||||||||||||| ||||    
T  25481858 tgtccacatcattcactgctacaag 25481882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 3 - 451
Target Start/End: Original strand, 28786160 - 28786608
Alignment:
Q  3 attcacctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacacc 102  Q
    |||||| ||| | |||||||| |||||||| || |  ||||||||| |||||||||| ||||||||| |||| | ||||  | | ||||||||  | |||    
T  28786160 attcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaacc 28786259  T
Q  103 ttcattgataacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatca 202  Q
    ||||||||| ||||  | |||||  |||| ||  |||| |||||||||||  |||||||||| ||||| ||||||||||| ||||| || || |||||||    
T  28786260 ttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatca 28786359  T
Q  203 attatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtgga 302  Q
    | || ||  | ||   |||||||||||| |||||||| ||||| ||||| |||| ||||  ||| || ||||| ||||||||  |||||| || ||| ||    
T  28786360 actacgccacatcaaaattttgcttggacgaacttgttcacattattcattgctacaagacaaaaggtcgcctcgttttgcctgttttctttggtgtcga 28786459  T
Q  303 accttctcacgtgcgacatcacaagggcagttatggtaaagcactggctgagcatattgacaggttccaaaataacaaggatagtatggagaggtttctg 402  Q
     ||| || | ||||||||||| |  ||  |||||||| ||||| |||||| ||||    | ||||| |||||| | |||||||  ||||||||||| |      
T  28786460 tcctactaatgtgcgacatcatacaggtcgttatggtgaagcattggctgggcatgaaaagaggtttcaaaatgataaggataacatggagaggttgcat 28786559  T
Q  403 aaatggaagagtgctcttactcaaactgctaacttctctggccaccatt 451  Q
     ||||||||   ||||| || ||| |||||||||| || ||| ||||||    
T  28786560 caatggaagttggctctgacccaagctgctaacttgtccggctaccatt 28786608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 3 - 451
Target Start/End: Original strand, 28792281 - 28792729
Alignment:
Q  3 attcacctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacacc 102  Q
    |||||| ||| | |||||||| |||||||| || |  ||||||||| |||||||||| ||||||||| |||| | ||||  | | ||||||||  | |||    
T  28792281 attcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaacc 28792380  T
Q  103 ttcattgataacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatca 202  Q
    ||||||||| ||||  | |||||  |||| ||  |||| |||||||||||  |||||||||| ||||| ||||||||||| ||||| || || |||||||    
T  28792381 ttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatca 28792480  T
Q  203 attatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtgga 302  Q
    | || ||  | ||   |||||||||||| |||||||| ||||| ||||| |||| ||||  ||| || ||||| ||||||||  |||||| || ||| ||    
T  28792481 actacgccacatcaaaattttgcttggacgaacttgttcacattattcattgctacaagacaaaaggtcgcctcgttttgcctgttttctttggtgtcga 28792580  T
Q  303 accttctcacgtgcgacatcacaagggcagttatggtaaagcactggctgagcatattgacaggttccaaaataacaaggatagtatggagaggtttctg 402  Q
     ||| || | ||||||||||| |  ||  |||||||| ||||| |||||| ||||    | ||||| |||||| | |||||||  ||||||||||| |      
T  28792581 tcctactaatgtgcgacatcatacaggtcgttatggtgaagcattggctgggcatgaaaagaggtttcaaaatgataaggataacatggagaggttgcat 28792680  T
Q  403 aaatggaagagtgctcttactcaaactgctaacttctctggccaccatt 451  Q
     ||||||||   ||||| || ||| |||||||||| || ||| ||||||    
T  28792681 caatggaagttggctctgacccaagctgctaacttgtccggctaccatt 28792729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 4 - 343
Target Start/End: Original strand, 29825910 - 29826249
Alignment:
Q  4 ttcacctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacacct 103  Q
    |||||||| ||||| ||||| ||||| | ||||   || |||||||  |||||||| || |||||| |||||| |||   | | |||  ||||| |||||    
T  29825910 ttcacctatgatgtcttcctcagtttcacaggtgcagatactcgctttggttttaccggcaatctctacaaagctctaactgacaagaaaattcgcacct 29826009  T
Q  104 tcattgataacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaa 203  Q
    |||||||| ||||| |||||||  |||| ||| |||| ||||| |||||| | ||||| ||| |||| ||||||||   ||||||  | || |||| |||    
T  29826010 tcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcacttgtgaaggcaattcaagaatctaggatagccattcctattttctctaccaa 29826109  T
Q  204 ttatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtggaa 303  Q
    ||||||||||||||| |||||||| ||||||||||| || ||  || | ||   ||||   || || || || |||||||| |||||||||||||||||     
T  29826110 ttatgcttcttcttcgttttgcttagatgaacttgtgcatatagttgagtgtgtcaagaggaagggtcgtctcgttttgcctattttctatgatgtggat 29826209  T
Q  304 ccttctcacgtgcgacatcacaagggcagttatggtaaag 343  Q
    |||||||| ||||||||||| |  || |||||||||||||    
T  29826210 ccttctcatgtgcgacatcagactgggagttatggtaaag 29826249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 137 - 311
Target Start/End: Original strand, 25538556 - 25538730
Alignment:
Q  137 aaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggatgaact 236  Q
    |||| |||||||||||| |||||||||| ||||| ||||| ||||| |||||| | || |||  ||| ||||| |||||||||||||| ||||| |||||    
T  25538556 aaatcacaccatcacttgtcaaggccatcgaagaatctagaatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaact 25538655  T
Q  237 tgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtggaaccttctca 311  Q
    |||||| ||||||||||||| ||||  |||  |  || |||| |||||  |||||||||||||||||||| ||||    
T  25538656 tgtccagatcattcactgctacaagacaaagagttgcttagtattgcccgttttctatgatgtggaacctactca 25538730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 137 - 323
Target Start/End: Original strand, 26055942 - 26056128
Alignment:
Q  137 aaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggatgaact 236  Q
    |||| ||| |||||||| |||||||||| ||||| ||| ||||||| |||||| | || |||  ||| ||||| |||||||||||||| ||||| |||||    
T  26055942 aaatcacatcatcacttgtcaaggccatcgaagaatctgggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaact 26056041  T
Q  237 tgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtggaaccttctcacgtgcgacatca 323  Q
    |||||||||||||||||||| |||   |||  |  || |||| |||||  |||||||||||||||||||| ||||| | ||||||||    
T  26056042 tgtccacatcattcactgctacaacacaaagagttgcttagtattgcccgttttctatgatgtggaacctactcacatacgacatca 26056128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 137 - 323
Target Start/End: Original strand, 26075912 - 26076098
Alignment:
Q  137 aaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggatgaact 236  Q
    |||| ||| |||||||| |||||||||| ||||| ||| ||||||| |||||| | || |||  ||| ||||| |||||||||||||| ||||| |||||    
T  26075912 aaatcacatcatcacttgtcaaggccatcgaagaatctgggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaact 26076011  T
Q  237 tgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtggaaccttctcacgtgcgacatca 323  Q
    |||||||||||||||||||| |||   |||  |  || |||| |||||  |||||||||||||||||||| ||||| | ||||||||    
T  26076012 tgtccacatcattcactgctacaacacaaagagttgcttagtattgcccgttttctatgatgtggaacctactcacatacgacatca 26076098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 3 - 249
Target Start/End: Complemental strand, 26893776 - 26893530
Alignment:
Q  3 attcacctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacacc 102  Q
    ||||||||||||||| ||||| | |||||||||    |||||||| |  |||||||| ||  ||||  | |||| ||||||| | |  ||||||||||||    
T  26893776 attcacctacgatgtcttcctcaattttagaggctctgacactcgttttggttttacgggtcatctttataaagctctttgtgatagtggaattcacacc 26893677  T
Q  103 ttcattgataacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatca 202  Q
    ||||||||| | | | |||||||  |||||||| ||||  ||||||||||| ||||||| ||||||||||||| ||| | |||||| ||| | |||||||    
T  26893676 ttcattgatgatacagagcttcatagaggtgacgaaatctcaccatcacttatcaaggcaattgaagagtctatgatatacattccagtcctctctatca 26893577  T
Q  203 attatgcttcttcttcattttgcttggatgaacttgtccacatcatt 249  Q
    | ||||||||||||  |||||| ||||| ||||| ||| | ||||||    
T  26893576 actatgcttcttctatattttgtttggaagaactcgtcaaaatcatt 26893530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 16 - 457
Target Start/End: Original strand, 25071554 - 25071995
Alignment:
Q  16 gtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacaccttcattgataaca 115  Q
    |||||| ||||||| || |||| ||||||||| | ||||||||| || |||||  | |||| ||||| | | || ||||| |||||||| |||||| |||    
T  25071554 gtgttcattagtttcaggggtaccgacactcgattcggttttaccggtaatctttataaagctctttctgacaaaggaatccacacctttattgatgaca 25071653  T
Q  116 aaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttc 215  Q
    || ||||| |  |||||||| |||| ||||| || ||   ||||  ||||||||| || || |||  ||||  |||||| ||||   | |||||||||||    
T  25071654 aagagcttaagagaggtgacgaaatcacaccttcgctccgcaagagcattgaagattcgagaattgccattatcgtcttctctaaagactatgcttcttc 25071753  T
Q  216 ttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtggaaccttctcacgtg 315  Q
    ||||||||| || || |||||||||||||||||||||| || |||||||||  | ||||| ||| | |||||||||||||     |||||||| || |||    
T  25071754 ttcattttgtttagacgaacttgtccacatcattcactacttcaaggaaaagagtcgccttgttctaccaattttctatggcaccgaaccttcgcaggtg 25071853  T
Q  316 cgacatcacaagggcagttatggtaaagcactggctgagcatattgacaggttccaaaataacaaggatagtatggagaggtttctgaaatggaagagtg 415  Q
    ||| | |  || | |||||||||| || || | ||| |||||   ||  |||| ||||||||||||||    |||||| |||| |||| ||||||||  |    
T  25071854 cgaaaactgaatgacagttatggtgaatcatttgctaagcatgaagaggggtttcaaaataacaaggaacacatggagcggttgctgacatggaagaaag 25071953  T
Q  416 ctcttactcaaactgctaacttctctggccaccatttcaatc 457  Q
    ||||||   || |||||||||| ||||| || ||||||||||    
T  25071954 ctcttaacgaagctgctaacttatctggacatcatttcaatc 25071995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 150 - 323
Target Start/End: Original strand, 26048874 - 26049047
Alignment:
Q  150 acttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggatgaacttgtccacatcatt 249  Q
    |||| |||||||||| ||||| ||||||||||| |||||| | || |||  ||| ||||| |||||||||||||| ||||| ||||||||||||||||||    
T  26048874 acttgtcaaggccatggaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcatt 26048973  T
Q  250 cactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtggaaccttctcacgtgcgacatca 323  Q
    ||||||| ||||  |||  |  || |||| |||||  |||| ||||||||||||||| ||||| | ||||||||    
T  26048974 cactgctacaagacaaagagttgcttagtattgcccgttttttatgatgtggaacctactcacatacgacatca 26049047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 150 - 323
Target Start/End: Original strand, 26070043 - 26070216
Alignment:
Q  150 acttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggatgaacttgtccacatcatt 249  Q
    |||| |||||||||| ||||| ||||||||||| |||||| | || |||  ||| ||||| |||||||||||||| ||||| ||||||||||||||||||    
T  26070043 acttgtcaaggccatggaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcatt 26070142  T
Q  250 cactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtggaaccttctcacgtgcgacatca 323  Q
    ||||||| ||||  |||  |  || |||| |||||  |||| ||||||||||||||| ||||| | ||||||||    
T  26070143 cactgctacaagacaaagagttgcttagtattgcccgttttttatgatgtggaacctactcacatacgacatca 26070216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 212 - 456
Target Start/End: Original strand, 26848751 - 26848995
Alignment:
Q  212 cttcttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtggaaccttctca 311  Q
    ||||||| ||||| ||||| |||||||||||||||||||| |||||||||||||| ||  || | ||| | ||  |||||||||   | |||||||||||    
T  26848751 cttcttcgttttgtttggacgaacttgtccacatcattcattgctccaaggaaaagggtagcatggttattcctgttttctatggcatagaaccttctca 26848850  T
Q  312 cgtgcgacatcacaagggcagttatggtaaagcactggctgagcatattgacaggttccaaaataacaaggatagtatggagaggtttctgaaatggaag 411  Q
     ||||||||||| ||  | ||||||||| ||||||| ||| |||||   ||   ||| |||||||||||||| || |||||| | || |  |||||||||    
T  26848851 tgtgcgacatcagaatagtagttatggtgaagcacttgctaagcatgaagaggtgtttcaaaataacaaggaaagcatggagcgtttgcgtaaatggaag 26848950  T
Q  412 agtgctcttactcaaactgctaacttctctggccaccatttcaat 456  Q
    |  |||||||  ||  |||||||||| ||||||||||||||||||    
T  26848951 aaagctcttaaccatgctgctaacttatctggccaccatttcaat 26848995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 4 - 466
Target Start/End: Original strand, 26974935 - 26975397
Alignment:
Q  4 ttcacctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacacct 103  Q
    |||||||| || |||||| ||||||| ||||||| ||||||||| | |||||| || || || ||| | |||| ||||| | | || |||||  ||| ||    
T  26974935 ttcacctatgacgtgttcattagtttcagaggtaccgacactcgattcggtttcaccggtaacctctataaagctctttctgacaaaggaatcaacatct 26975034  T
Q  104 tcattgataacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaa 203  Q
    |||||||| ||||  ||||| |   ||| ||| |||| ||||| || ||  |||||  ||||||||| || ||||||  ||||  |||||| ||||   |    
T  26975035 tcattgatgacaaggagcttaaaaaaggggacgaaatcacaccttcgctcctcaagagcattgaagactcgaggattaccattatcgtcttctctaaaga 26975134  T
Q  204 ttatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtggaa 303  Q
     |||||||||||||||||||| ||||| |||||||||||||||||||| || ||||| ||||| ||  || ||||| | ||  |||||||||     |||    
T  26975135 ctatgcttcttcttcattttgtttggacgaacttgtccacatcattcattgttccaatgaaaagggtagcatagttattcctgttttctatggcacagaa 26975234  T
Q  304 ccttctcacgtgcgacatcacaagggcagttatggtaaagcactggctgagcatattgacaggttccaaaataacaaggatagtatggagaggtttctga 403  Q
    |||||||| |||||  | |  || | |||||||||| ||| ||| ||| |||||   ||  |||| |||||||| || || |   ||||| |||| || |    
T  26975235 ccttctcatgtgcgtaaactgaatgacagttatggtgaagtacttgctaagcatgaagaggggtttcaaaataaaaatgaaaacttggagcggttgctta 26975334  T
Q  404 aatggaagagtgctcttactcaaactgctaacttctctggccaccatttcaatcctaggtacc 466  Q
    |||||||||  |||||||  ||| |||||||||| ||||||||||||||||||| | ||||||    
T  26975335 aatggaagaaagctcttaaccaagctgctaacttatctggccaccatttcaatcttgggtacc 26975397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 16 - 256
Target Start/End: Original strand, 26655884 - 26656124
Alignment:
Q  16 gtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacaccttcattgataaca 115  Q
    |||||||| |||||||| || |  ||||| ||  |||||||||| || |||||| |||| | ||||  | | |||||||| || || ||||||||| |||    
T  26655884 gtgttcctcagttttaggggcattgacacccggcacggttttaccggcaatctctacaaggctcttattgataagggaatccatactttcattgatgaca 26655983  T
Q  116 aaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttc 215  Q
    |  | |||| | |||| ||  |||| |||||||||||  | |||||||||||||| || |||||||| |||||| | || |||  ||| ||||| |||||    
T  26655984 atgatcttctcagaggagatgaaatcacaccatcactcgttaaggccattgaagaatccaggatttttattcccatattttctgccaactatgcatcttc 26656083  T
Q  216 ttcattttgcttggatgaacttgtccacatcattcactgct 256  Q
    ||||||||| ||||| |||||||||||||||||||| ||||    
T  26656084 ttcattttgtttggacgaacttgtccacatcattcattgct 26656124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 16 - 256
Target Start/End: Original strand, 26761855 - 26762095
Alignment:
Q  16 gtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacaccttcattgataaca 115  Q
    |||||||| |||||||| || |  ||||| ||  |||||||||| || |||||| |||| | ||||  | | |||||||| || || ||||||||| |||    
T  26761855 gtgttcctcagttttaggggcattgacacccggcacggttttaccggcaatctctacaaggctcttattgataagggaatccatactttcattgatgaca 26761954  T
Q  116 aaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttc 215  Q
    |  | |||| | |||| ||  |||| |||||||||||  | |||||||||||||| || |||||||| |||||| | || |||  ||| ||||| |||||    
T  26761955 atgatcttctcagaggagatgaaatcacaccatcactcgttaaggccattgaagaatccaggatttttattcccatattttctgccaactatgcatcttc 26762054  T
Q  216 ttcattttgcttggatgaacttgtccacatcattcactgct 256  Q
    ||||||||| ||||| |||||||||||||||||||| ||||    
T  26762055 ttcattttgtttggacgaacttgtccacatcattcattgct 26762095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 4 - 466
Target Start/End: Original strand, 26635573 - 26636035
Alignment:
Q  4 ttcacctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacacct 103  Q
    ||||||||||| |||||| ||||||| || || | ||||||||  | |||||| || || || ||| | |||| ||||| | | || |||||  ||||||    
T  26635573 ttcacctacgacgtgttcattagtttcaggggcaccgacactcaattcggtttcaccggtaacctctataaagctctttctgacaaaggaatcaacacct 26635672  T
Q  104 tcattgataacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaa 203  Q
    |||||||| ||||  ||||| |   ||| ||  |||| ||||| || ||  |||||  |||||||||||| ||||||  ||||  ||| || ||||   |    
T  26635673 tcattgatgacaaggagcttaaaaaaggggatgaaatcacaccttcgctcctcaagagcattgaagagtcgaggattgccattatcgttttctctaagga 26635772  T
Q  204 ttatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtggaa 303  Q
     |||||||||||||  ||||| |||||||||||||||||||||||||| |||||||| ||||| ||  ||   ||| | ||  |||||||||     |||    
T  26635773 atatgcttcttctttgttttgtttggatgaacttgtccacatcattcattgctccaatgaaaagggtagcaaggttattcctgttttctatggcaccgaa 26635872  T
Q  304 ccttctcacgtgcgacatcacaagggcagttatggtaaagcactggctgagcatattgacaggttccaaaataacaaggatagtatggagaggtttctga 403  Q
    |||||||| |||||| | |  || | |||||||||| |||| || ||| |||||   ||   ||| ||||||| |||||| |  |||||| |||| ||||    
T  26635873 ccttctcatgtgcgaaaactaaatgacagttatggtgaagcgcttgctaagcatgaagatcagtttcaaaatagcaaggaaaacatggagtggttgctga 26635972  T
Q  404 aatggaagagtgctcttactcaaactgctaacttctctggccaccatttcaatcctaggtacc 466  Q
    |||||||||  |||||||  ||| |||||||||| ||||||||||||||||||| | ||||||    
T  26635973 aatggaagaaagctcttaaccaagctgctaacttatctggccaccatttcaatcttgggtacc 26636035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 4 - 466
Target Start/End: Original strand, 26741539 - 26742001
Alignment:
Q  4 ttcacctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacacct 103  Q
    ||||||||||| |||||| ||||||| || || | ||||||||  | |||||| || || || ||| | |||| ||||| | | || |||||  ||||||    
T  26741539 ttcacctacgacgtgttcattagtttcaggggcaccgacactcaattcggtttcaccggtaacctctataaagctctttctgacaaaggaatcaacacct 26741638  T
Q  104 tcattgataacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaa 203  Q
    |||||||| ||||  ||||| |   ||| ||  |||| ||||| || ||  |||||  |||||||||||| ||||||  ||||  ||| || ||||   |    
T  26741639 tcattgatgacaaggagcttaaaaaaggggatgaaatcacaccttcgctcctcaagagcattgaagagtcgaggattgccattatcgttttctctaagga 26741738  T
Q  204 ttatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtggaa 303  Q
     |||||||||||||  ||||| |||||||||||||||||||||||||| |||||||| ||||| ||  ||   ||| | ||  |||||||||     |||    
T  26741739 atatgcttcttctttgttttgtttggatgaacttgtccacatcattcattgctccaatgaaaagggtagcaaggttattcctgttttctatggcaccgaa 26741838  T
Q  304 ccttctcacgtgcgacatcacaagggcagttatggtaaagcactggctgagcatattgacaggttccaaaataacaaggatagtatggagaggtttctga 403  Q
    |||||||| |||||| | |  || | |||||||||| |||| || ||| |||||   ||   ||| ||||||| |||||| |  |||||| |||| ||||    
T  26741839 ccttctcatgtgcgaaaactaaatgacagttatggtgaagcgcttgctaagcatgaagatcagtttcaaaatagcaaggaaaacatggagtggttgctga 26741938  T
Q  404 aatggaagagtgctcttactcaaactgctaacttctctggccaccatttcaatcctaggtacc 466  Q
    |||||||||  |||||||  ||| |||||||||| ||||||||||||||||||| | ||||||    
T  26741939 aatggaagaaagctcttaaccaagctgctaacttatctggccaccatttcaatcttgggtacc 26742001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 160 - 472
Target Start/End: Original strand, 26861655 - 26861964
Alignment:
Q  160 gccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctcca 259  Q
    ||||||||||||||||| ||||||||||| || || |||  ||| ||||| ||||| |||||||| ||||||||||||||||| |||||| ||||   ||    
T  26861655 gccattgaagagtctagaattttcattcctgtgttttctgccaactatgcctcttcgtcattttgtttggatgaacttgtccaaatcattaactg---ca 26861751  T
Q  260 aggaaaatgggcgcctagttttgccaattttctatgatgtggaaccttctcacgtgcgacatcacaagggcagttatggtaaagcactggctgagcatat 359  Q
    ||||||| || ||| | ||||||||  |||||||||   |||| ||| || | ||||||||||| |  || | ||||||| ||||| ||||| |||||      
T  26861752 aggaaaagggtcgcgtcgttttgcctgttttctatggcatggatcctactaatgtgcgacatcatagaggtatttatggtgaagcattggctaagcatga 26861851  T
Q  360 tgacaggttccaaaataacaaggatagtatggagaggtttctgaaatggaagagtgctcttactcaaactgctaacttctctggccaccatttcaatcct 459  Q
      | ||||| |||||| | | |||||  ||||||||||| | || ||||||   |||||| |  ||| |||||||||| || ||| ||||||| | ||||    
T  26861852 aaaaaggtttcaaaatgatatggataacatggagaggttgcagagatggaaagttgctctgaaccaagctgctaacttgtcaggctaccattttagtcct 26861951  T
Q  460 aggtacctcactt 472  Q
     |||||| |||||    
T  26861952 gggtaccccactt 26861964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 3 - 224
Target Start/End: Original strand, 27229114 - 27229335
Alignment:
Q  3 attcacctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacacc 102  Q
    |||||| ||| | ||||||||||||||||| || |  ||||||||  |||||||||| || |||||| |||| | ||||  | | |||||||| || |||    
T  27229114 attcacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccggcaatctctacaaggctcttactgacaagggaatccatacc 27229213  T
Q  103 ttcattgataacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatca 202  Q
    ||||||||| ||||  | |||||  |||| ||| |||| |||||||||||  ||||||||||||| || ||| ||||||| |||||| | || |||  ||    
T  27229214 ttcattgatgacaatgatcttcaaagaggagacgaaatcacaccatcactcgtcaaggccattgacgaatctcggatttttattcccatattttctgcca 27229313  T
Q  203 attatgcttcttcttcattttg 224  Q
    | ||||| ||||||||||||||    
T  27229314 actatgcatcttcttcattttg 27229335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 137 - 297
Target Start/End: Original strand, 2184304 - 2184464
Alignment:
Q  137 aaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggatgaact 236  Q
    |||||||| |||||||| | || |||||||||||||| || |||||||| || || || || |  || |||||||||||||||||||| ||||| |||||    
T  2184304 aaataacagcatcacttatgaaagccattgaagagtccagaattttcatccctgttttctcaaagaactatgcttcttcttcattttgtttggacgaact 2184403  T
Q  237 tgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgat 297  Q
    ||||||||||||||  | |||||||  ||| || ||||| ||| | ||| |||||||||||    
T  2184404 tgtccacatcattcgttactccaagtcaaagggacgcctggttctaccagttttctatgat 2184464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 220 - 323
Target Start/End: Original strand, 26811608 - 26811711
Alignment:
Q  220 ttttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtggaaccttctcacgtgcgac 319  Q
    ||||| || ||||| ||||||||||||||| ||| || ||||||||| || ||||| ||| | ||| ||||||||| |||||||||||||||||||||||    
T  26811608 ttttgtttagatgagcttgtccacatcattaactacttcaaggaaaaaggtcgccttgttctaccagttttctatggtgtggaaccttctcacgtgcgac 26811707  T
Q  320 atca 323  Q
    ||||    
T  26811708 atca 26811711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 205 - 466
Target Start/End: Original strand, 26959250 - 26959511
Alignment:
Q  205 tatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtggaac 304  Q
    |||||||||||||| ||||  |||||||||||||||||||||||||| | |||||| ||||| ||  ||    || | ||  |||||||||     ||||    
T  26959250 tatgcttcttcttcgttttatttggatgaacttgtccacatcattcatttctccaatgaaaaaggtagcacgattattcctgttttctatggcacagaac 26959349  T
Q  305 cttctcacgtgcgacatcacaagggcagttatggtaaagcactggctgagcatattgacaggttccaaaataacaaggatagtatggagaggtttctgaa 404  Q
    ||||||| |||||| | |  || |||||||||||| |||| || ||| |||||   ||   ||| ||||||| |||||| |  |||||| |||| |||||    
T  26959350 cttctcatgtgcgaaaactaaatggcagttatggtgaagcgcttgctaagcatgaagagcagtttcaaaatagcaaggaaaacatggagcggttgctgaa 26959449  T
Q  405 atggaagagtgctcttactcaaactgctaacttctctggccaccatttcaatcctaggtacc 466  Q
    ||||||||  |||||||  ||| |||||||||| ||||||||||||||||||| | ||||||    
T  26959450 atggaagaaagctcttaaccaagctgctaacttatctggccaccatttcaatcttgggtacc 26959511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 3 - 256
Target Start/End: Complemental strand, 27531502 - 27531249
Alignment:
Q  3 attcacctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacacc 102  Q
    |||||| ||| | |||||||| |||||||| ||    ||||||||| |||||||||| ||||||||| |||| | ||||  | | ||||||||  | |||    
T  27531502 attcacttaccaagtgttcctcagttttaggggcgcggacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatctatacc 27531403  T
Q  103 ttcattgataacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatca 202  Q
    ||||||||| ||||  | |||||  |||| ||  |||| |||||||||||    || ||||||||| | ||||||||||| |||||||| || |||   |    
T  27531402 ttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactaaaaaatgccattgaaaaatctaggatttttattcccgtattttctgaaa 27531303  T
Q  203 attatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgct 256  Q
    | ||||| |||||||||||||| ||||| |||||||| ||||||| ||| ||||    
T  27531302 actatgcatcttcttcattttgtttggacgaacttgttcacatcactcattgct 27531249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 774 - 864
Target Start/End: Original strand, 26623847 - 26623937
Alignment:
Q  774 gatatgaatacgagtttattgagaagatagtcaaatatgtatccaacaagatcaatcgtgttcctttatatgttgctgattaccctgttgg 864  Q
    |||||||||| || |||||||| ||||||||||||||  | |||||||||||||||||||| || ||| |||||||| | |||||||||||    
T  26623847 gatatgaatatgattttattgaaaagatagtcaaatacatctccaacaagatcaatcgtgtgcccttacatgttgctaaataccctgttgg 26623937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 774 - 864
Target Start/End: Original strand, 26729824 - 26729914
Alignment:
Q  774 gatatgaatacgagtttattgagaagatagtcaaatatgtatccaacaagatcaatcgtgttcctttatatgttgctgattaccctgttgg 864  Q
    |||||||||| || |||||||| ||||||||||||||  | |||||||||||||||||||| || ||| |||||||| | |||||||||||    
T  26729824 gatatgaatatgattttattgaaaagatagtcaaatacatctccaacaagatcaatcgtgtgcccttacatgttgctaaataccctgttgg 26729914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 163 - 357
Target Start/End: Complemental strand, 27427751 - 27427557
Alignment:
Q  163 attgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaagg 262  Q
    |||||||| || |||||||| |||||| | || |||  ||| ||||| |||||||||| ||| |||||   ||||||||||||||||||||||| |||      
T  27427751 attgaagaatccaggattttgattcccatattttctgccaactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctacaaaa 27427652  T
Q  263 aaaatgggcgcctagttttgccaattttctatgatgtggaaccttctcacgtgcgacatcacaagggcagttatggtaaagcactggctgagcat 357  Q
      || ||  |||| ||||||||  |||||| || |||||||||| || | ||||||||||| |  || || |||||||||||| |||||||||||    
T  27427651 ccaagggttgcctcgttttgcctgttttctttggtgtggaacctactgatgtgcgacatcatacaggtaggtatggtaaagcattggctgagcat 27427557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 581 - 672
Target Start/End: Complemental strand, 28138352 - 28138257
Alignment:
Q  581 ctatgcttctcacccttttcttttatcaaagacatcttggtctccatttttagactatctcatt-----tgtaatagggtgcaggcccactcctgcc 672  Q
    ||||||||||| |||||| ||||||||| |||||| |||||||||||||||||| | |||||||     ||||||||||||||| ||||||||||||    
T  28138352 ctatgcttctcgcccttt-cttttatcagagacattttggtctccatttttagattctctcattaatactgtaatagggtgcagacccactcctgcc 28138257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 574 - 670
Target Start/End: Original strand, 30587465 - 30587561
Alignment:
Q  574 ttgccatctatgcttctcacccttttcttttatcaaagacatcttggtctccatttttagactatctcatttgtaatagggtgcaggcccactcctg 670  Q
    ||||||||| |||||||  |||||||||||| | |   |||| ||||||| | |||||||| | |||||||||||||||||||||||||||||||||    
T  30587465 ttgccatctttgcttcttccccttttctttttttagtaacattttggtctacttttttagattctctcatttgtaatagggtgcaggcccactcctg 30587561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 245 - 455
Target Start/End: Original strand, 26617746 - 26617956
Alignment:
Q  245 tcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtggaaccttctcacgtgcgacatcacaagggcagttatggtaaagc 344  Q
    ||||||||| ||  ||||||||| | ||||| ||| | ||| ||||||||||||||||||||||| | || |||||| ||||   ||| |||||| ||||    
T  26617746 tcattcactacttaaaggaaaatagtcgccttgttcttccagttttctatgatgtggaaccttctgaagtacgacattacaataacaggtatggtgaagc 26617845  T
Q  345 actggctgagcatattgacaggttccaaaataacaaggatagtatggagaggtttctgaaatggaagagtgctcttactcaaactgctaacttctctggc 444  Q
    |||  |||||  |   || |||||||||||||||||||| |  |||||| |||| | |||||||||||  |||||||  ||| ||  |||||| ||||||    
T  26617846 acttactgagtttgaagaaaggttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagcttataacttatctggc 26617945  T
Q  445 caccatttcaa 455  Q
     | ||||||||    
T  26617946 tatcatttcaa 26617956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 245 - 455
Target Start/End: Original strand, 26723674 - 26723884
Alignment:
Q  245 tcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtggaaccttctcacgtgcgacatcacaagggcagttatggtaaagc 344  Q
    ||||||||| ||  ||||||||| | ||||| ||| | ||| ||||||||||||||||||||||| | || |||||| ||||   ||| |||||| ||||    
T  26723674 tcattcactacttaaaggaaaatagtcgccttgttcttccagttttctatgatgtggaaccttctgaagtacgacattacaataacaggtatggtgaagc 26723773  T
Q  345 actggctgagcatattgacaggttccaaaataacaaggatagtatggagaggtttctgaaatggaagagtgctcttactcaaactgctaacttctctggc 444  Q
    |||  |||||  |   || |||||||||||||||||||| |  |||||| |||| | |||||||||||  |||||||  ||| ||  |||||| ||||||    
T  26723774 acttactgagtttgaagaaaggttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagcttataacttatctggc 26723873  T
Q  445 caccatttcaa 455  Q
     | ||||||||    
T  26723874 tatcatttcaa 26723884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 261
Target Start/End: Original strand, 2184914 - 2185038
Alignment:
Q  137 aaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggatgaact 236  Q
    ||||||||||||| ||| | || ||||||||||| || || |||||||| || || || || |   | |||||||||||||||||||| ||||| |||||    
T  2184914 aaataacaccatcgcttgtgaaagccattgaagaatccagaattttcatccctgttttctcaaaggactatgcttcttcttcattttgtttggacgaact 2185013  T
Q  237 tgtccacatcattcactgctccaag 261  Q
    |||||| |||||||  |||||||||    
T  2185014 tgtccatatcattcgttgctccaag 2185038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 741 - 864
Target Start/End: Complemental strand, 28098082 - 28097959
Alignment:
Q  741 atttactcaatcttttttgattgggtaggagtggatatgaatacgagtttattgagaagatagtcaaatatgtatccaacaagatcaatcgtgttccttt 840  Q
    |||||||||| ||| | | |||||  |||| ||||||||||| ||||||||||  | | |||||||||||||||||||||||  | |||| ||| | |||    
T  28098082 atttactcaaacttatcttattggccaggaatggatatgaattcgagtttattcgggaaatagtcaaatatgtatccaacaaattgaatcatgtcctttt 28097983  T
Q  841 atatgttgctgattaccctgttgg 864  Q
    | |||||| ||||||||| |||||    
T  28097982 acatgttgttgattaccccgttgg 28097959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 774 - 864
Target Start/End: Original strand, 26656541 - 26656631
Alignment:
Q  774 gatatgaatacgagtttattgagaagatagtcaaatatgtatccaacaagatcaatcgtgttcctttatatgttgctgattaccctgttgg 864  Q
    ||||||||||| ||||||||||||| ||||||||| |  | ||| |||||||||||||||||  |||| |||||||  | |||||||||||    
T  26656541 gatatgaatacaagtttattgagaatatagtcaaagacatctccgacaagatcaatcgtgtttttttacatgttgccaaataccctgttgg 26656631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 774 - 864
Target Start/End: Original strand, 26762512 - 26762602
Alignment:
Q  774 gatatgaatacgagtttattgagaagatagtcaaatatgtatccaacaagatcaatcgtgttcctttatatgttgctgattaccctgttgg 864  Q
    ||||||||||| ||||||||||||| ||||||||| |  | ||| |||||||||||||||||  |||| |||||||  | |||||||||||    
T  26762512 gatatgaatacaagtttattgagaatatagtcaaagacatctccgacaagatcaatcgtgtttttttacatgttgccaaataccctgttgg 26762602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 775 - 864
Target Start/End: Original strand, 29826560 - 29826649
Alignment:
Q  775 atatgaatacgagtttattgagaagatagtcaaatatgtatccaacaagatcaatcgtgttcctttatatgttgctgattaccctgttgg 864  Q
    |||||||||||||||||||| ||||||||||||| | || ||||||||||   | ||||| ||| |  ||||||| ||||||||||||||    
T  29826560 atatgaatacgagtttattgtgaagatagtcaaagaagtttccaacaagactgagcgtgtccctcttcatgttgcggattaccctgttgg 29826649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #82
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 788 - 868
Target Start/End: Original strand, 31288895 - 31288975
Alignment:
Q  788 tttattgagaagatagtcaaatatgtatccaacaagatcaatcgtgttcctttatatgttgctgattaccctgttggtctc 868  Q
    |||||||| || ||||| | | |||| ||||||||||| || | |||||||||| ||||||||||||||| ||||||||||    
T  31288895 tttattgaaaaaatagttacagatgtctccaacaagattaaccatgttcctttacatgttgctgattaccttgttggtctc 31288975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #83
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 27665220 - 27665169
Alignment:
Q  205 tatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgct 256  Q
    |||||| ||||||||||||| || ||||||||||||||||||||||| ||||    
T  27665220 tatgctacttcttcattttgtttagatgaacttgtccacatcattcattgct 27665169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #84
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 769 - 864
Target Start/End: Complemental strand, 27698197 - 27698102
Alignment:
Q  769 gagtggatatgaatacgagtttattgagaagatagtcaaatatgtatccaacaagatcaatcgtgttcctttatatgttgctgattaccctgttgg 864  Q
    |||| ||||||||||| ||||||||||  |||||||||||||  | ||||||||||||| ||||   || ||| |||||||  |||||||||||||    
T  27698197 gagtagatatgaatacaagtttattgaagagatagtcaaatacatctccaacaagatcagtcgtcagcccttacatgttgccaattaccctgttgg 27698102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #85
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 774 - 864
Target Start/End: Original strand, 25539119 - 25539209
Alignment:
Q  774 gatatgaatacgagtttattgagaagatagtcaaatatgtatccaacaagatcaatcgtgttcctttatatgttgctgattaccctgttgg 864  Q
    ||||||||||| |||||||||||||||||||| || |  | |||||||| ||||||| ||||  ||||||||| ||  | |||||||||||    
T  25539119 gatatgaatacaagtttattgagaagatagtcgaagacatctccaacaatatcaatcatgtttttttatatgtggccaaataccctgttgg 25539209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #86
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 774 - 864
Target Start/End: Original strand, 26803022 - 26803112
Alignment:
Q  774 gatatgaatacgagtttattgagaagatagtcaaatatgtatccaacaagatcaatcgtgttcctttatatgttgctgattaccctgttgg 864  Q
    ||||||||||| |||| ||||   |||||||||||||  | ||||||||||||||||||   || ||| |||||||| |||||||||||||    
T  26803022 gatatgaatacaagttgattggagagatagtcaaatacatctccaacaagatcaatcgtcagcccttacatgttgctaattaccctgttgg 26803112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #87
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 774 - 864
Target Start/End: Original strand, 31285135 - 31285225
Alignment:
Q  774 gatatgaatacgagtttattgagaagatagtcaaatatgtatccaacaagatcaatcgtgttcctttatatgttgctgattaccctgttgg 864  Q
    |||||||||| || |||||||   | |||||||||||  | |||||||||||||||||||| || ||| |||||||  |||||||||||||    
T  31285135 gatatgaatatgattttattggagacatagtcaaatacatctccaacaagatcaatcgtgtgcccttacatgttgccaattaccctgttgg 31285225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #88
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 775 - 864
Target Start/End: Original strand, 26849289 - 26849378
Alignment:
Q  775 atatgaatacgagtttattgagaagatagtcaaatatgtatccaacaagatcaatcgtgttcctttatatgttgctgattaccctgttgg 864  Q
    ||||||| || | ||||||| ||| ||||| ||  |||| |||||||||||||| | |||||||||  ||||||||||||||| ||||||    
T  26849289 atatgaacaccattttattgggaaaatagttaaggatgtctccaacaagatcaaccatgttcctttgcatgttgctgattaccttgttgg 26849378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #89
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 815 - 868
Target Start/End: Original strand, 26959743 - 26959796
Alignment:
Q  815 tccaacaagatcaatcgtgttcctttatatgttgctgattaccctgttggtctc 868  Q
    ||||||||||| || | |||||||||| ||||||||||||||| ||||||||||    
T  26959743 tccaacaagattaaccatgttcctttacatgttgctgattaccttgttggtctc 26959796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #90
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 403 - 476
Target Start/End: Complemental strand, 28098262 - 28098189
Alignment:
Q  403 aaatggaagagtgctcttactcaaactgctaacttctctggccaccatttcaatcctaggtacctcacttcact 476  Q
    ||||||||||  |||||||  ||| | |||||||| || |||||||||||||||||||||||||  ||||||||    
T  28098262 aaatggaagatggctcttaaccaagcagctaacttgtccggccaccatttcaatcctaggtaccatacttcact 28098189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #91
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 28491825 - 28491760
Alignment:
Q  3 attcacctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatct 68  Q
    ||||||||| |||||||||||||| ||| |||||   || |||||||||||||| |||||||||||    
T  28491825 attcacctatgatgtgttccttagctttcgaggtgaggatactcgctacggtttcactggaaatct 28491760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #92
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 29804235 - 29804170
Alignment:
Q  3 attcacctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatct 68  Q
    ||||||||| |||||||||||||| ||| |||||   || |||||||||||||| |||||||||||    
T  29804235 attcacctatgatgtgttccttagctttcgaggtgaggatactcgctacggtttcactggaaatct 29804170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #93
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 774 - 834
Target Start/End: Original strand, 26647055 - 26647115
Alignment:
Q  774 gatatgaatacgagtttattgagaagatagtcaaatatgtatccaacaagatcaatcgtgt 834  Q
    ||||||||||| ||||||||| |||||||||| || |  | ||||||||||||||||||||    
T  26647055 gatatgaatacaagtttattgggaagatagtcgaagacatctccaacaagatcaatcgtgt 26647115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #94
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 774 - 834
Target Start/End: Original strand, 26753023 - 26753083
Alignment:
Q  774 gatatgaatacgagtttattgagaagatagtcaaatatgtatccaacaagatcaatcgtgt 834  Q
    ||||||||||| ||||||||| |||||||||| || |  | ||||||||||||||||||||    
T  26753023 gatatgaatacaagtttattgggaagatagtcgaagacatctccaacaagatcaatcgtgt 26753083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #95
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 774 - 864
Target Start/End: Original strand, 26143444 - 26143534
Alignment:
Q  774 gatatgaatacgagtttattgagaagatagtcaaatatgtatccaacaagatcaatcgtgttcctttatatgttgctgattaccctgttgg 864  Q
    ||||||||||| |||||||||||||||||||| || |  | |||||||| ||||||| ||||  |||| |||| ||  | |||||||||||    
T  26143444 gatatgaatacaagtttattgagaagatagtcgaagacatctccaacaatatcaatcatgtttttttaaatgtagccaaataccctgttgg 26143534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #96
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 774 - 864
Target Start/End: Complemental strand, 27610726 - 27610636
Alignment:
Q  774 gatatgaatacgagtttattgagaagatagtcaaatatgtatccaacaagatcaatcgtgttcctttatatgttgctgattaccctgttgg 864  Q
    |||||||||||||||||| ||   |||||||||||||  | ||||||||||||| ||||   || ||| |||||||  |||||||||||||    
T  27610726 gatatgaatacgagtttactggagagatagtcaaatacatctccaacaagatcagtcgtcaacccttacatgttgccaattaccctgttgg 27610636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #97
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 774 - 864
Target Start/End: Complemental strand, 27718105 - 27718015
Alignment:
Q  774 gatatgaatacgagtttattgagaagatagtcaaatatgtatccaacaagatcaatcgtgttcctttatatgttgctgattaccctgttgg 864  Q
    |||||||||||||||||||||   |||||||||||||  | |||||||||| || ||||   || ||| |||||||  |||||||||||||    
T  27718105 gatatgaatacgagtttattggagagatagtcaaatacatctccaacaagaccagtcgtcaacccttacatgttgccaattaccctgttgg 27718015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #98
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 430 - 476
Target Start/End: Original strand, 28150235 - 28150281
Alignment:
Q  430 gctaacttctctggccaccatttcaatcctaggtacctcacttcact 476  Q
    |||||||| || ||||||||||||||||||||||| | |||||||||    
T  28150235 gctaacttgtccggccaccatttcaatcctaggtatcccacttcact 28150281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #99
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 778 - 835
Target Start/End: Original strand, 25511518 - 25511575
Alignment:
Q  778 tgaatacgagtttattgagaagatagtcaaatatgtatccaacaagatcaatcgtgtt 835  Q
    ||||||| |||||||||||||||||||| || |  | |||||||||||||||| ||||    
T  25511518 tgaatacaagtttattgagaagatagtcgaagacatctccaacaagatcaatcatgtt 25511575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #100
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 774 - 835
Target Start/End: Original strand, 25580298 - 25580359
Alignment:
Q  774 gatatgaatacgagtttattgagaagatagtcaaatatgtatccaacaagatcaatcgtgtt 835  Q
    ||||||||||| |||||||||||||||||||| || |  | |||||||| ||||||| ||||    
T  25580298 gatatgaatacaagtttattgagaagatagtcgaagacatctccaacaatatcaatcatgtt 25580359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #101
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 26617403 - 26617440
Alignment:
Q  205 tatgcttcttcttcattttgcttggatgaacttgtcca 242  Q
    |||||||||||||||||||| || ||||||||||||||    
T  26617403 tatgcttcttcttcattttgtttagatgaacttgtcca 26617440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #102
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 26723331 - 26723368
Alignment:
Q  205 tatgcttcttcttcattttgcttggatgaacttgtcca 242  Q
    |||||||||||||||||||| || ||||||||||||||    
T  26723331 tatgcttcttcttcattttgtttagatgaacttgtcca 26723368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #103
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 388 - 457
Target Start/End: Original strand, 26937373 - 26937442
Alignment:
Q  388 atggagaggtttctgaaatggaagagtgctcttactcaaactgctaacttctctggccaccatttcaatc 457  Q
    ||||||||||| | |||||||||||  |||||||  ||| | || ||||| |||||||||||||||||||    
T  26937373 atggagaggttgcggaaatggaagatagctcttaaccaagcggcaaacttgtctggccaccatttcaatc 26937442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #104
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 774 - 827
Target Start/End: Complemental strand, 27427218 - 27427165
Alignment:
Q  774 gatatgaatacgagtttattgagaagatagtcaaatatgtatccaacaagatca 827  Q
    |||||||||||||| ||||||  ||||||||||||||  | |||||||||||||    
T  27427218 gatatgaatacgagcttattggaaagatagtcaaatacatctccaacaagatca 27427165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 319; Significance: 1e-179; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 319; E-Value: 1e-179
Query Start/End: Original strand, 3 - 537
Target Start/End: Complemental strand, 58587 - 58053
Alignment:
Q  3 attcacctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacacc 102  Q
    |||||||||  | ||||||||||| ||||||||| | ||||||||||| |||||||||||||||||| ||| || ||||||| | |||||||| |  |||    
T  58587 attcacctatcacgtgttccttagctttagaggttgtgacactcgctatggttttactggaaatctctacagagctctttgtgacaagggaatccgaacc 58488  T
Q  103 ttcattgataacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatca 202  Q
    ||||| ||| ||| | ||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  58487 ttcatggatgacagagagcttcaaggaggtgacgaaataacaccatcacttttcaaggccattaaagagtctaggattttcattcccgtcttgtctatca 58388  T
Q  203 attatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtgga 302  Q
    | |||||||||||||||||||||||| | ||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||| |||||    
T  58387 actatgcttcttcttcattttgcttgaacgaacttgtccacatcattcactgcttcgaggaatatgggcgcctagttttgccaattttctatgacgtgga 58288  T
Q  303 accttctcacgtgcgacatcacaagggcagttatggtaaagcactggctgagcatattgacaggttccaaaataacaaggatagtatggagaggtttctg 402  Q
    |||||||||||||||||||||  | || ||||||||||||||||| || ||||||||||| ||||||||||||| ||||||||| || |||||||| | |    
T  58287 accttctcacgtgcgacatcaagatggaagttatggtaaagcacttgccgagcatattgagaggttccaaaatagcaaggatagcatagagaggttgcag 58188  T
Q  403 aaatggaagagtgctcttactcaaactgctaacttctctggccaccatttcaatcctaggtacctcacttcacttatgttttacattcttacatatatca 502  Q
    ||||||||||  ||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||| ||| ||||||||||||||||||||| |||    
T  58187 aaatggaagacagctcttactcagactgctaacttctctggccaccatttcaatactaggtaccccactttactcatgttttacattcttacatatgtca 58088  T
Q  503 catttctttaattttctattttctaactgtttcat 537  Q
     || |||||||| ||||||||| |||| |||||||    
T  58087 tatctctttaatattctattttataaccgtttcat 58053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 735 - 921
Target Start/End: Complemental strand, 57940 - 57753
Alignment:
Q  735 tgatgcatttactcaatcttttttgatt-gggtaggagtggatatgaatacgagtttattgagaagatagtcaaatatgtatccaacaagatcaatcgtg 833  Q
    |||||||||||||||| ||| ||| ||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  57940 tgatgcatttactcaaacttatttcatttgggtaggaatggatatgaatgcgagtttattgagaagatagtcaaatatgtatctaacaagatcaatcatg 57841  T
Q  834 ttcctttatatgttgctgattaccctgttggtctcgagtctagggtcctaaaagtaaattcatttttggatgttggatctaatggtga 921  Q
    |||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| || |||||||| |||||||||||||    
T  57840 ttcctttatatgttgccgattaccctgttggtatcgaatctagggtcctaaaagtaaattcacttctggatgttagatctaatggtga 57753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 139; Significance: 3e-72; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 7 - 357
Target Start/End: Complemental strand, 5091255 - 5090905
Alignment:
Q  7 acctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacaccttca 106  Q
    |||||||| || || |||||||||||||| | ||||||||| ||||||||||||||||||||| |  ||| |||  ||   |||||||||||||||||||    
T  5091255 acctacgacgtctttcttagttttagaggcaccgacactcgttacggttttactggaaatctctatgaagctctacgtgtcaagggaattcacaccttca 5091156  T
Q  107 ttgataacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaatta 206  Q
    ||||| ||| | |||||||  |||| ||| |||||||||| |||||| ||||||||||| |||| |||| |||| |||||  ||| || |||| | | ||    
T  5091155 ttgatgacagagagcttcagcgaggagaccaaataacaccgtcacttctcaaggccattcaagaatctaagattgtcattatcgttttctctaaccacta 5091056  T
Q  207 tgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtggaacct 306  Q
    |||||||||||| ||||| || |||||||||||||| || |||||||||||||||||||||||  |||| |||||||| |||||||||| ||||||||||    
T  5091055 tgcttcttcttcgttttgtttagatgaacttgtccatattattcactgctccaaggaaaatggttgcctggttttgcctattttctatggtgtggaacct 5090956  T
Q  307 tctcacgtgcgacatcacaagggcagttatggtaaagcactggctgagcat 357  Q
    ||||| |||||| |||| |  || ||||||||| ||||||| |||||||||    
T  5090955 tctcatgtgcgatatcagactggaagttatggtgaagcacttgctgagcat 5090905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 160 - 312
Target Start/End: Complemental strand, 18679702 - 18679550
Alignment:
Q  160 gccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctcca 259  Q
    |||||||||||||||||||| |||||||| || || |||||||| ||||| |||||||||||||| ||||| ||||||||||||||||||||||||| ||    
T  18679702 gccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctaca 18679603  T
Q  260 aggaaaatgggcgcctagttttgccaattttctatgatgtggaaccttctcac 312  Q
    ||  ||| || || || ||||||||  |||||||||  ||||| ||| |||||    
T  18679602 agacaaagggtcgtcttgttttgcctgttttctatgtcgtggatcctactcac 18679550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 3 - 295
Target Start/End: Complemental strand, 18731796 - 18731504
Alignment:
Q  3 attcacctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacacc 102  Q
    |||||| ||| | |||||||| || || || || || ||||||||  |||||||||||||  ||||| ||| || ||||  | | |||||||| ||||||    
T  18731796 attcacttaccaagtgttcctcagcttcaggggcagtgacactcgtgacggttttactggccatctctacagagctcttactgacaagggaatccacacc 18731697  T
Q  103 ttcattgataacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatca 202  Q
    ||||||||| ||    | || ||  |||| ||  |||| | |||||||||   ||| |||||||||||||||||||| |||||||| || || |||||||    
T  18731696 ttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatcttcattcctgtgttttctatca 18731597  T
Q  203 attatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatg 295  Q
    | ||||| |||||||||||||| ||||| ||||||||||||||||| ||||||| ||||  ||| || || || ||||||||  |||||||||    
T  18731596 actatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatg 18731504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 18699535 - 18699400
Alignment:
Q  160 gccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctcca 259  Q
    |||||||||||||||||||| |||||||| || || |||||||| ||||| |||||||||||||| ||||| |||||||| |||||||||||||||| ||    
T  18699535 gccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgttcacatcattcactgctaca 18699436  T
Q  260 aggaaaatgggcgcctagttttgccaattttctatg 295  Q
    ||  ||| || || || ||||||||  |||||||||    
T  18699435 agacaaaaggtcgtctcgttttgcctgttttctatg 18699400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 3 - 323
Target Start/End: Complemental strand, 18655769 - 18655449
Alignment:
Q  3 attcacctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacacc 102  Q
    |||||| ||| | |||||||| || || || || || ||||||||  |||||||||||||  ||||| |||||| ||||  | | |||||||| ||||||    
T  18655769 attcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactgacaagggaatccacacc 18655670  T
Q  103 ttcattgataacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatca 202  Q
    ||||||||| ||    |||| ||  | || ||  |||| | |||||||||   ||| |||||| ||||||||||||| || ||||| || || |||||||    
T  18655669 ttcattgatgaccgtgagctgcaaagtggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatca 18655570  T
Q  203 attatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtgga 302  Q
    | ||||| |||||||||||||| ||||| |||||||||| |||||||||||||| ||||  ||| || || || ||||| ||  |||||||||  |||||    
T  18655569 actatgcctcttcttcattttgtttggacgaacttgtccgcatcattcactgctacaagacaaagggtcgtctcgtttttcctgttttctatggcgtgga 18655470  T
Q  303 accttctcacgtgcgacatca 323  Q
     ||| ||||| | ||||||||    
T  18655469 tcctactcacatacgacatca 18655449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 3 - 295
Target Start/End: Complemental strand, 18724377 - 18724085
Alignment:
Q  3 attcacctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacacc 102  Q
    |||||| ||| | |||||||| || || || || || ||||||||  |||||||||||||  ||||| |||| | ||||  | | |||||||| ||||||    
T  18724377 attcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggtcatctctacaaggctcttactgacaagggaatccacacc 18724278  T
Q  103 ttcattgataacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatca 202  Q
    ||||||||| ||    | || ||  |||| ||  |||| | |||||||||   ||| |||||||||||||||||||| |||||||| || || |||||||    
T  18724277 ttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatcttcattcctgtgttttctatca 18724178  T
Q  203 attatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatg 295  Q
    | ||||| |||||||||||||| ||| | ||||||||||||||||| ||||||| ||||  ||| || || || ||||||||  |||||||||    
T  18724177 actatgcctcttcttcattttgtttgaacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatg 18724085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 733 - 864
Target Start/End: Complemental strand, 5090600 - 5090469
Alignment:
Q  733 tgtgatgcatttactcaatcttttttgattgggtaggagtggatatgaatacgagtttattgagaagatagtcaaatatgtatccaacaagatcaatcgt 832  Q
    ||||||||||||| ||||  || | ||||| | ||||| |||||||||||||||||||||| ||| |||||||| |||||| ||||||||||||||||      
T  5090600 tgtgatgcatttattcaaatttatctgatttgataggactggatatgaatacgagtttattcagatgatagtcacatatgtctccaacaagatcaatcac 5090501  T
Q  833 gttcctttatatgttgctgattaccctgttgg 864  Q
      ||||||| |||||||||||||||| |||||    
T  5090500 actcctttacatgttgctgattacccggttgg 5090469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 163 - 357
Target Start/End: Original strand, 18073804 - 18073998
Alignment:
Q  163 attgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaagg 262  Q
    |||||||| || |||||||| |||||| | || |||  ||| ||||| |||||||||| ||| |||||   ||||||||||||||||||||||| |||      
T  18073804 attgaagaatccaggattttgattcccatattttctgccaactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctacaaaa 18073903  T
Q  263 aaaatgggcgcctagttttgccaattttctatgatgtggaaccttctcacgtgcgacatcacaagggcagttatggtaaagcactggctgagcat 357  Q
      || ||  |||| ||||||||  |||||| || |||||||||| || | ||||||||||| |  || || |||||||||||| |||||||||||    
T  18073904 ccaagggttgcctcgttttgcctgttttctttggtgtggaacctactgatgtgcgacatcatacaggtaggtatggtaaagcattggctgagcat 18073998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 774 - 832
Target Start/End: Complemental strand, 18731106 - 18731048
Alignment:
Q  774 gatatgaatacgagtttattgagaagatagtcaaatatgtatccaacaagatcaatcgt 832  Q
    ||||||||||| |||||||||| ||||||||||||||||| ||||||||||||| ||||    
T  18731106 gatatgaatacaagtttattgaaaagatagtcaaatatgtctccaacaagatcagtcgt 18731048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 774 - 832
Target Start/End: Complemental strand, 18655079 - 18655021
Alignment:
Q  774 gatatgaatacgagtttattgagaagatagtcaaatatgtatccaacaagatcaatcgt 832  Q
    ||||||||||| |||||||||  ||||||||||||||||| ||||||||||||| ||||    
T  18655079 gatatgaatacaagtttattggaaagatagtcaaatatgtctccaacaagatcagtcgt 18655021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 256
Target Start/End: Complemental strand, 17989185 - 17989092
Alignment:
Q  163 attgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgct 256  Q
    |||||||| || |||||||| |||||| | || |||  ||| ||||| |||||||||| ||| |||||   |||||||||||||||||||||||    
T  17989185 attgaagaatccaggattttgattcccatattttctgccaactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgct 17989092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 774 - 864
Target Start/End: Complemental strand, 18699002 - 18698912
Alignment:
Q  774 gatatgaatacgagtttattgagaagatagtcaaatatgtatccaacaagatcaatcgtgttcctttatatgttgctgattaccctgttgg 864  Q
    ||||||||||| |||||||||   | ||||||||||| || ||||||||||||| ||||   || ||| |||||||  |||||||||||||    
T  18699002 gatatgaatacaagtttattggagatatagtcaaatacgtctccaacaagatcagtcgtcagcccttacatgttgccaattaccctgttgg 18698912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 774 - 832
Target Start/End: Complemental strand, 18723687 - 18723629
Alignment:
Q  774 gatatgaatacgagtttattgagaagatagtcaaatatgtatccaacaagatcaatcgt 832  Q
    ||||||||||| |||||||||  |||||||||||||||||   ||||||||||| ||||    
T  18723687 gatatgaatacaagtttattggaaagatagtcaaatatgtcaacaacaagatcagtcgt 18723629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 774 - 827
Target Start/End: Original strand, 18074337 - 18074390
Alignment:
Q  774 gatatgaatacgagtttattgagaagatagtcaaatatgtatccaacaagatca 827  Q
    |||||||||||||| ||||||  ||||||||||||||  | |||||||||||||    
T  18074337 gatatgaatacgagcttattggaaagatagtcaaatacatctccaacaagatca 18074390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 98; Significance: 9e-48; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 543 - 672
Target Start/End: Original strand, 4292930 - 4293059
Alignment:
Q  543 aattgatgtaagtggcagtataatagatggcttgccatctatgcttctcacccttttcttttatcaaagacatcttggtctccatttttagactatctca 642  Q
    |||||| |||||||| |||| || ||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||| |||||    
T  4292930 aattgaagtaagtggaagtagaaaagatggcttgccatctatgcttctcacacttttctttaatcaaagacattttggtctccatttttagactctctca 4293029  T
Q  643 tttgtaatagggtgcaggcccactcctgcc 672  Q
    ||||||||||||||||||||||||||||||    
T  4293030 tttgtaatagggtgcaggcccactcctgcc 4293059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 96; Significance: 1e-46; HSPs: 3)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 3 - 357
Target Start/End: Complemental strand, 3727 - 3372
Alignment:
Q  3 attcacctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacacc 102  Q
    |||||| ||| | ||||||||||||||||| || |  ||||||||  |||||||||| ||||||||| |||| | ||||  | | |||||||| || |||    
T  3727 attcacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaatccatacc 3628  T
Q  103 ttcattgataacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatca 202  Q
    ||||||||| ||||  | |||||  |||| ||  |||| |||||||||||  ||||||||||||| || ||||||||||| ||||| || || |||||||    
T  3627 ttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatca 3528  T
Q  203 at-tatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtgg 301  Q
    |  ||||| |||||||||||||| ||||| ||||||||||||||||||||||||| ||||  ||| || ||||| ||| ||||  |||| | || |||||    
T  3527 acctatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgcctcgttctgcctgttttatttggtgtgg 3428  T
Q  302 aaccttctcacgtgcgacatcacaagggcagttatggtaaagcactggctgagcat 357  Q
    ||||| ||   ||||||||||  || || ||||||||| ||||| |||||||||||    
T  3427 aacctactattgtgcgacatcgtaaaggtagttatggtgaagcattggctgagcat 3372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 3 - 357
Target Start/End: Complemental strand, 14660 - 14307
Alignment:
Q  3 attcacctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacacc 102  Q
    |||||| ||| | |||||| | |||||||| || |  ||||||||  |||||||||| ||||||||| |||| | ||||  | | |||||||| || |||    
T  14660 attcacttaccaagtgttcatcagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaatccatacc 14561  T
Q  103 ttcattgataacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatca 202  Q
    ||||||||| ||||  | |||||  |||| ||  |||| |||||||||||  ||||||||||||| || ||||||||||| ||||| || || |||||||    
T  14560 ttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatca 14461  T
Q  203 attatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtgga 302  Q
    | ||||| | |||||| ||||| ||||| |||||||||||||| |||||||||| ||||  ||| || ||||| ||||||||  ||||||  |  |||||    
T  14460 actatgcct-ttcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgttttgcctgttttcttcggcgtgga 14362  T
Q  303 accttctcacgtgcgacatcacaagggcagttatggtaaagcactggctgagcat 357  Q
    |||| || ||||||||||||| || || ||||||||| ||||| |||||||||||    
T  14361 acctactaacgtgcgacatcagaaaggtagttatggtgaagcattggctgagcat 14307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #3
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 774 - 864
Target Start/End: Complemental strand, 3145 - 3055
Alignment:
Q  774 gatatgaatacgagtttattgagaagatagtcaaatatgtatccaacaagatcaatcgtgttcctttatatgttgctgattaccctgttgg 864  Q
    |||||||||||||||||||||   |||||||||||||  | |||||||||| || ||||   || ||| |||||||  |||||||||||||    
T  3145 gatatgaatacgagtttattggagagatagtcaaatacatctccaacaagaccagtcgtcaacccttacatgttgccaattaccctgttgg 3055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 79; Significance: 2e-36; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 3 - 357
Target Start/End: Complemental strand, 4976 - 4622
Alignment:
Q  3 attcacctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacacc 102  Q
    |||||| ||| | |||||||| |||||||| || |  ||||||||| |||||||||| ||||||||| |||| | ||||  | | ||||||||  | |||    
T  4976 attcacttaccaagtgttcctcagttttaggggcattgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaacc 4877  T
Q  103 ttcattgataacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatca 202  Q
    ||||||||| ||||  | |||||  |||| ||  |||| |||||||| ||   |||||||||||| || ||||||||||| ||||| || || ||||||     
T  4876 ttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatccctccgcaaggccattgatgaatctaggatttttattcctgtgttttctatct 4777  T
Q  203 attatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtgga 302  Q
      ||||| | |||||| ||||| ||||| |||||||||||||| |||||||||| ||||  ||| || ||||| ||||||||  ||||||  |  |||||    
T  4776 tctatgccttttcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgttttgcctgttttcttcggcgtgga 4677  T
Q  303 accttctcacgtgcgacatcacaagggcagttatggtaaagcactggctgagcat 357  Q
    |||| || ||||||||||||  || || ||||||||| ||||| |||||||||||    
T  4676 acctactaacgtgcgacatctgaaaggtagttatggtgaagcattggctgagcat 4622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 3 - 352
Target Start/End: Complemental strand, 13937 - 13588
Alignment:
Q  3 attcacctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacacc 102  Q
    |||||| ||| | |||||||| |||||||| || |  ||||||||| |||||||||| || |||||| |||| | ||||  | | ||||||||  | |||    
T  13937 attcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaacc 13838  T
Q  103 ttcattgataacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatca 202  Q
    ||||||||| ||||  | |||||  |||| ||  |||| |||||||||||  |||||||||| ||||| ||||||||||| ||||| || || |||||||    
T  13837 ttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatca 13738  T
Q  203 attatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtgga 302  Q
    | || ||  ||||   |||||||||||| |||||||| ||||| ||||| |||| ||||  ||| || ||||| ||||||||  |||||| || ||||||    
T  13737 actacgccacttcaaaattttgcttggacgaacttgttcacattattcattgctacaagacaaaaggtcgcctcgttttgcctgttttctttggtgtgga 13638  T
Q  303 accttctcacgtgcgacatcacaagggcagttatggtaaagcactggctg 352  Q
     ||| || | ||||||||||| |  ||  |||||||| ||||| ||||||    
T  13637 tcctactaatgtgcgacatcatacaggtcgttatggtgaagcattggctg 13588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 3e-35; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 119 - 344
Target Start/End: Original strand, 3279686 - 3279914
Alignment:
Q  119 agcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttc 218  Q
    ||||||| ||||||||  |||| |||| ||||||| |||||||||| |||||||| | |||||| ||||| ||||| |||||||| ||||||||||||      
T  3279686 agcttcatggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatcaactatgcttcttctat 3279785  T
Q  219 attttgcttggatgaacttgtccacatcattcactgct----ccaaggaaaatgggcgcctagttttgccaattttctatgatgtggaaccttctcacgt 314  Q
    |||||| ||||| |||||||||||||||||||| ||||    |||| || || || |||  | |||| || ||||||||||||||||||||||| |||||    
T  3279786 attttgtttggacgaacttgtccacatcattcattgcttcgaccaa-gagaagggtcgcaaaattttacctattttctatgatgtggaaccttcccacgt 3279884  T
Q  315 gcgacatcacaagggcagttatggtaaagc 344  Q
    ||||||||| |  || |||||||| |||||    
T  3279885 gcgacatcagactgggagttatggcaaagc 3279914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 12 - 457
Target Start/End: Complemental strand, 17993980 - 17993535
Alignment:
Q  12 cgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacaccttcattgat 111  Q
    |||||||||| ||||||| || |||| ||| ||||| || ||||| || || |||||| | |||| ||||| | | ||||||||||  |||||||| |||    
T  17993980 cgatgtgttcattagtttcaggggtaccgatactcgatatggtttcaccggtaatctctataaagctctttctgacaagggaattcgaaccttcatcgat 17993881  T
Q  112 aacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgctt 211  Q
     ||||| |||||||  |||||||  |||| ||||| || ||  |||||  ||||||||| || || |||   |||  |||||| || |   | |||||||    
T  17993880 gacaaagagcttcagagaggtgatgaaatcacaccgtcgctcctcaagagcattgaagactcaagaattgcgattatcgtcttctcaaaggactatgctt 17993781  T
Q  212 cttcttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgg-gcgcctagttttgccaattttctatgatgtggaaccttctc 310  Q
    ||||||||||||| || || |||||||||||||||||||| |||||||| ||||| ||  || |  ||  | ||  |||||||||     ||||||||||    
T  17993780 cttcttcattttgtttagacgaacttgtccacatcattcaatgctccaatgaaaagggtacgac-ggtaattcctgttttctatggcacagaaccttctc 17993682  T
Q  311 acgtgcgacatcacaagggcagttatggtaaagcactggctgagcatattgacaggttccaaaataacaaggatagtatggagaggtttctgaaatggaa 410  Q
    | ||||||||||| || |  ||||||||| ||||||| ||| |||||   ||  | || ||||||| |||||| |  |||||| ||||  ||||||||||    
T  17993681 aggtgcgacatcagaatgatagttatggtgaagcacttgctaagcatgaagagggttttcaaaatagcaaggaaaacatggagcggttgttgaaatggaa 17993582  T
Q  411 gagtgctcttactcaaactgctaacttctctggccaccatttcaatc 457  Q
    ||  |||||||  ||| |||||||||| |||||||||||||||||||    
T  17993581 gaaagctcttaaccaagctgctaacttatctggccaccatttcaatc 17993535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 758 - 916
Target Start/End: Original strand, 3280219 - 3280377
Alignment:
Q  758 tgattgggtaggagtggatatgaatacgagtttattgagaagatagtcaaatatgtatccaacaagatcaatcgtgttcctttatatgttgctgattacc 857  Q
    |||||||| |||| || |||| ||||| ||||||| | | | ||||||||| |||||||||||||||| ||||||| ||||||| ||||||  |||||||    
T  3280219 tgattgggcaggaatgaatatcaatacaagtttataggggatatagtcaaaaatgtatccaacaagataaatcgtgctcctttacatgttgtcgattacc 3280318  T
Q  858 ctgttggtctcgagtctagggtcctaaaagtaaattcatttttggatgttggatctaat 916  Q
    | |||||  |  ||||| | ||||| |||||||||||| || | || |||| |||||||    
T  3280319 cggttggcatgcagtctcgagtccttaaagtaaattcacttctagaagttgcatctaat 3280377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 2e-33; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 136 - 381
Target Start/End: Complemental strand, 28127838 - 28127593
Alignment:
Q  136 aaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggatgaac 235  Q
    ||||| ||||| |||||||| |||||||||||||| ||||| ||||| ||||| || || |||| ||| ||||| |||||||||||||| ||||| ||||    
T  28127838 aaaatcacaccgtcacttttaaaggccattgaagaatctagaatttttattcctgtattttctaccaactatgcctcttcttcattttgtttggacgaac 28127739  T
Q  236 ttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtggaaccttctcacgtgcgacatcacaagggcagtta 335  Q
    |||| |||||||||||||||| ||||  ||| || ||||||||||||||  |||||| ||  ||||| ||| || | |||||| |||| |  || |||||    
T  28127738 ttgtgcacatcattcactgctacaagacaaagggtcgcctagttttgcctgttttctttggcgtggatcctactgatgtgcgatatcatacagggagtta 28127639  T
Q  336 tggtaaagcactggctgagcatattgacaggttccaaaataacaag 381  Q
    |||| |||  || ||| |||||   || ||||||||||||||||||    
T  28127638 tggtgaagagcttgctaagcatggagagaggttccaaaataacaag 28127593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 160 - 323
Target Start/End: Complemental strand, 268492 - 268329
Alignment:
Q  160 gccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctcca 259  Q
    ||||||||||||||||||||||| ||||| || || |||||||| ||||| |||||||||||||| ||||| ||||||||||||||||||||||||| ||    
T  268492 gccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctaca 268393  T
Q  260 aggaaaatgggcgcctagttttgccaattttctatgatgtggaaccttctcacgtgcgacatca 323  Q
    || |||| || || ||  |||||||  | |||||||  ||||| ||| ||||| | ||||||||    
T  268392 agaaaaagggtcgtctcattttgcccgtcttctatggcgtggatcctactcacatacgacatca 268329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 155 - 381
Target Start/End: Complemental strand, 28164502 - 28164277
Alignment:
Q  155 tcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggatgaacttgtccacatcattcactg 254  Q
    |||||||||||||| | ||| | ||||| ||||| || || |||||||| ||||| |||||||||||||| ||||| |||||||||||||||||||||||    
T  28164502 tcaaggccattgaaaaatcttgaatttttattcctgtgttatctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactg 28164403  T
Q  255 ctccaaggaaaatgggcgcctagttttgccaattttctatgatgtggaaccttctcacgtgcgacatcacaagggcagttatggtaaagcactggctgag 354  Q
    || ||||  ||| || ||||||||||||||  |||||| ||  ||||| ||| || | ||||||||||| |  || |||||||| ||||  ||  || ||    
T  28164402 ctacaagacaaagggtcgcctagttttgcctgttttct-tggcgtggatcctactgatgtgcgacatcatacagggagttatggcaaagatcttactaag 28164304  T
Q  355 catattgacaggttccaaaataacaag 381  Q
    |||  ||| ||||||||||||||||||    
T  28164303 catggtgagaggttccaaaataacaag 28164277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 774 - 864
Target Start/End: Complemental strand, 267946 - 267856
Alignment:
Q  774 gatatgaatacgagtttattgagaagatagtcaaatatgtatccaacaagatcaatcgtgttcctttatatgttgctgattaccctgttgg 864  Q
    ||||||||||| |||||||||   |||||||||||||  | ||||||||||||| |||||  || ||| |||||||  |||||||||||||    
T  267946 gatatgaatacaagtttattggagagatagtcaaatacatctccaacaagatcagtcgtgagcccttacatgttgccaattaccctgttgg 267856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 774 - 835
Target Start/End: Complemental strand, 28127281 - 28127220
Alignment:
Q  774 gatatgaatacgagtttattgagaagatagtcaaatatgtatccaacaagatcaatcgtgtt 835  Q
    ||||||||||| |||||||| |||||||| ||||| |  ||||| ||| |||||||||||||    
T  28127281 gatatgaatacaagtttattcagaagataatcaaagacatatccgacaggatcaatcgtgtt 28127220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 66; Significance: 1e-28; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 3 - 352
Target Start/End: Original strand, 7407 - 7756
Alignment:
Q  3 attcacctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacacc 102  Q
    |||||| ||| | ||||||||||||||||| || |  ||||||||| |||||||||| || |||||| |||| | ||||  | | ||||||||  | |||    
T  7407 attcacttaccaagtgttccttagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaacc 7506  T
Q  103 ttcattgataacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatca 202  Q
    ||||||||| ||||  | |||||  |||| ||  |||| |||||||||||  |||||||||| ||||| ||||||||||| ||||| || || |||||||    
T  7507 ttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatca 7606  T
Q  203 attatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtgga 302  Q
    | || ||  ||||   |||||||||||| |||||||| ||||| ||||| |||| ||||  | | || ||||| ||||||||  |||||| || ||||||    
T  7607 actacgccacttcaaaattttgcttggacgaacttgttcacattattcattgctacaagacagaaggtcgcctcgttttgcctgttttctttggtgtgga 7706  T
Q  303 accttctcacgtgcgacatcacaagggcagttatggtaaagcactggctg 352  Q
     ||| || | ||||||||||| |  ||  |||||||| ||||| ||||||    
T  7707 tcctactaatgtgcgacatcatacaggtcgttatggtgaagcattggctg 7756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 1e-28; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 3 - 240
Target Start/End: Original strand, 31903733 - 31903970
Alignment:
Q  3 attcacctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacacc 102  Q
    ||||||||||||||||||||| || ||||||||    ||||||||||| |||||||||||||||||| |||||| ||||| | | |||||||| ||||||    
T  31903733 attcacctacgatgtgttcctcagctttagaggcttagacactcgctatggttttactggaaatctctacaaagctctttatgataagggaatccacacc 31903832  T
Q  103 ttcattgataacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatca 202  Q
    || |||||  |  || | |||||  ||||  |  |||| ||||||||||||||  |||| ||||||||||||||||||  ||||   ||  | ||||  |    
T  31903833 tttattgacgatgaagaacttcaaagaggacatgaaatcacaccatcacttttagaggcaattgaagagtctaggattgccattattgtgctctctaaaa 31903932  T
Q  203 attatgcttcttcttcattttgcttggatgaacttgtc 240  Q
    | |||||||||||||||||||||||  |||||||||||    
T  31903933 actatgcttcttcttcattttgcttacatgaacttgtc 31903970  T

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Target: chr8; HSP #2
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 162 - 261
Target Start/End: Complemental strand, 29273916 - 29273817
Alignment:
Q  162 cattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaag 261  Q
    ||||||||||||||| ||||| ||||| || || |||||||| ||||| |||||||||||||| ||||| ||||||||||||||||||||||||| ||||    
T  29273916 cattgaagagtctagaatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaag 29273817  T

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Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 593 - 669
Target Start/End: Original strand, 8058824 - 8058900
Alignment:
Q  593 cccttttcttttatcaaagacatcttggtctccatttttagactatctcatttgtaatagggtgcaggcccactcct 669  Q
    |||||||||||||||| | || | || |||| |  ||||||||| |||||| ||||||||||||||||||| |||||    
T  8058824 cccttttcttttatcagacactttttagtcttctgttttagactctctcatatgtaatagggtgcaggccctctcct 8058900  T

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Target: chr5 (Bit Score: 51; Significance: 1e-19; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 102 - 344
Target Start/End: Original strand, 16688992 - 16689234
Alignment:
Q  102 cttcattgataacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatc 201  Q
    |||||||||| ||||  | |||||  ||||||||||||| |||||||||||| ||||||| |||||||| || ||||||   || ||||| || ||||      
T  16688992 cttcattgatgacaaggaacttcagagaggtgacaaaatcacaccatcacttatcaaggcaattgaagactcaaggattgcaatccccgtgttttctaag 16689091  T
Q  202 aattatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaaggaaaatgggcgcctagttttgccaattttctatgatgtgg 301  Q
    || ||||| | ||| || ||||| ||||||||||||||| |||||||| |  ||| ||  | ||| || || |||||||||||  |||||||||| ||||    
T  16689092 aactatgcattttcctcgttttgtttggatgaacttgtcaacatcattgatggcttcagtgcaaaaggtcggctagttttgcctgttttctatgacgtgg 16689191  T
Q  302 aaccttctcacgtgcgacatcacaagggcagttatggtaaagc 344  Q
    | ||||| || ||| ||||||| |  || ||||||||| ||||    
T  16689192 atccttcgcatgtgagacatcagattggaagttatggtgaagc 16689234  T

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Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 594 - 669
Target Start/End: Original strand, 12107070 - 12107147
Alignment:
Q  594 ccttttcttttatcaaagacatcttggtctccatttttagactatctcatttgta--atagggtgcaggcccactcct 669  Q
    ||||||||||||||| |||| | || |||| | |||||||||| |||||| ||||  ||||||||||||||| |||||    
T  12107070 ccttttcttttatcagagactttttagtcttcttttttagactctctcatatgtaatatagggtgcaggccctctcct 12107147  T

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Target: scaffold1254 (Bit Score: 49; Significance: 2e-18; HSPs: 1)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 3 - 203
Target Start/End: Complemental strand, 222 - 22
Alignment:
Q  3 attcacctacgatgtgttccttagttttagaggtagcgacactcgctacggttttactggaaatctccacaaagatctttgtaagaagggaattcacacc 102  Q
    |||||| ||| | ||||||||||||||||| || |  ||||||||| |||||||||| || |||||| |||| | ||||  | | ||||||||  | |||    
T  222 attcacttaccaagtgttccttagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaacc 123  T
Q  103 ttcattgataacaaaaagcttcacggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatca 202  Q
    ||||||||| ||||  | |||||  |||| ||  |||| |||||||||||  |||||||||| ||||| ||||||||||| ||||| || || |||||||    
T  122 ttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatca 23  T
Q  203 a 203  Q
    |    
T  22 a 22  T

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Target: scaffold0003 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 163 - 357
Target Start/End: Original strand, 59612 - 59806
Alignment:
Q  163 attgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggatgaacttgtccacatcattcactgctccaagg 262  Q
    |||||||| || |||||||| |||||| | || |||  ||| ||||| |||||||||| ||| |||||   ||||||||||||||||||||||| |||      
T  59612 attgaagaatccaggattttgattcccatattttctgccaactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctacaaaa 59711  T
Q  263 aaaatgggcgcctagttttgccaattttctatgatgtggaaccttctcacgtgcgacatcacaagggcagttatggtaaagcactggctgagcat 357  Q
      || ||  |||| ||||||||  |||||| || |||||||||| || | ||||||||||| |  || || |||||||||||| |||||||||||    
T  59712 ccaagggttgcctcgttttgcctgttttctttggtgtggaacctactgatgtgcgacatcatacaggtaggtatggtaaagcattggctgagcat 59806  T

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Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 774 - 827
Target Start/End: Original strand, 60145 - 60198
Alignment:
Q  774 gatatgaatacgagtttattgagaagatagtcaaatatgtatccaacaagatca 827  Q
    |||||||||||||| ||||||  ||||||||||||||  | |||||||||||||    
T  60145 gatatgaatacgagcttattggaaagatagtcaaatacatctccaacaagatca 60198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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