View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11750_low_21 (Length: 417)
Name: NF11750_low_21
Description: NF11750
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11750_low_21 |
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Alignment Details
Target: chr8 (Bit Score: 354; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 7 - 398
Target Start/End: Original strand, 5265158 - 5265553
Alignment:
| Q |
7 |
tcaataacctggta-tctaatgtgcatcaacaggaaatat---caacaatgtaaactcaaaaaactaatattctaacaaacagaacatacttaccagata |
102 |
Q |
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| T |
5265158 |
tcaataacctggtaatctaatgtgcatcaacaggaaatataatcaacaatgtaaactcaaaaaactaatattctaacaaacagaacatacttaccagata |
5265257 |
T |
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| Q |
103 |
atcaaacaccgcgcattcataaagcttaacaacggtagagaaagtgtcattcttggcggtggtgagagaaagctcatctttaatccactgctgccacaag |
202 |
Q |
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| T |
5265258 |
atcaaacaccgcgcattcataaagcttaacaacggtagagaaagtgtcattattggcggtggtgagagaaagctcatctttaatccactgctgccacaag |
5265357 |
T |
|
| Q |
203 |
gaaggggtcaatggaaagatttcagtcataacttcccttgcttttctcagtttatcaacatcaccggtcttccgaagtagcgttatatactgaaaatgaa |
302 |
Q |
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| T |
5265358 |
gaaggggtcaatggaaagatttcagccataacttcccttgcttttctcagtttatcaacatcaccggttttccgaagtagcgttatatactgaaaatgaa |
5265457 |
T |
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| Q |
303 |
aggaggatgaatcaagaagcgaattagtgtaacaataacttgattgaatggtaaagaaatgtgttcacaaaacctaactcaactgtcaaagatgtc |
398 |
Q |
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| T |
5265458 |
aggaggatgaatcaagcagcgaattagtgtaacaataacttgattgaatggtaaagaaatgtgttcacaaaacctaactcaactgtcaaatatgtc |
5265553 |
T |
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